Complet list of 1tq1 hssp file
Complete list of 1tq1.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1TQ1
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 16-JUN-04 1TQ1
COMPND MOL_ID: 1; MOLECULE: SENESCENCE-ASSOCIATED FAMILY PROTEIN; CHAIN: A; S
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; ORGANISM_COMMON:
AUTHOR C.C.CORNILESCU,G.CORNILESCU,S.SINGH,M.S.LEE,E.M.TYLER, M.N.SHAHAN,D.VI
DBREF 1TQ1 A 11 129 UNP Q39129 STR16_ARATH 2 120
SEQLENGTH 118
NCHAIN 1 chain(s) in 1TQ1 data set
NALIGN 73
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : STR16_ARATH 1TQ1 0.99 0.99 1 118 2 119 118 0 0 120 Q39129 Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana GN=STR16 PE=1 SV=2
2 : R0GC43_9BRAS 0.87 0.95 1 118 2 119 118 0 0 120 R0GC43 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027386mg PE=4 SV=1
3 : V4JZU4_THESL 0.80 0.91 1 118 2 119 118 0 0 121 V4JZU4 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005068mg PE=4 SV=1
4 : V4MIB7_THESL 0.78 0.91 1 118 2 120 119 1 1 122 V4MIB7 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005068mg PE=4 SV=1
5 : M4F7Y0_BRARP 0.76 0.89 3 118 5 123 119 1 3 124 M4F7Y0 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA037191 PE=4 SV=1
6 : B9SXL0_RICCO 0.71 0.85 2 118 65 181 117 0 0 182 B9SXL0 Senescence-associated protein DIN1, putative OS=Ricinus communis GN=RCOM_0017290 PE=4 SV=1
7 : Q45TE3_TOBAC 0.69 0.83 2 118 68 184 117 0 0 185 Q45TE3 Senescence-associated protein OS=Nicotiana tabacum GN=didiA9 PE=2 SV=1
8 : B2C7Y6_NICBE 0.68 0.81 2 118 68 184 117 0 0 185 B2C7Y6 Chloroplast N receptor-interacting protein 1 OS=Nicotiana benthamiana GN=NRIP1 PE=1 SV=1
9 : F6HWV1_VITVI 0.68 0.79 2 118 64 180 117 0 0 181 F6HWV1 Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0684g00030 PE=4 SV=1
10 : Q9MBD6_TOBAC 0.68 0.83 2 118 68 184 117 0 0 185 Q9MBD6 Ntdin OS=Nicotiana tabacum GN=Ntdin PE=2 SV=1
11 : V4SDE1_9ROSI 0.68 0.84 2 118 67 183 117 0 0 184 V4SDE1 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026577mg PE=4 SV=1
12 : B7FGV4_MEDTR 0.65 0.84 2 118 68 184 117 0 0 185 B7FGV4 Senescence-associated protein DIN1 OS=Medicago truncatula GN=MTR_5g023170 PE=2 SV=1
13 : C6SXE2_SOYBN 0.65 0.84 2 118 69 185 117 0 0 186 C6SXE2 Uncharacterized protein OS=Glycine max PE=2 SV=1
14 : M0ZW90_SOLTU 0.65 0.82 2 118 69 185 117 0 0 186 M0ZW90 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400003666 PE=4 SV=1
15 : C6SX67_SOYBN 0.64 0.84 2 118 68 184 117 0 0 185 C6SX67 Putative uncharacterized protein OS=Glycine max PE=2 SV=1
16 : E4MXL3_THEHA 0.64 0.78 1 118 67 184 118 0 0 185 E4MXL3 mRNA, clone: RTFL01-39-I05 OS=Thellungiella halophila PE=2 SV=1
17 : M0RNF6_MUSAM 0.64 0.80 1 118 41 158 118 0 0 159 M0RNF6 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
18 : M4D579_BRARP 0.64 0.79 1 118 64 181 118 0 0 182 M4D579 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA011636 PE=4 SV=1
19 : O04410_RAPSA 0.64 0.80 1 118 64 181 118 0 0 182 O04410 Din1 OS=Raphanus sativus GN=din1 PE=2 SV=1
20 : V4MAY5_THESL 0.64 0.78 1 118 67 184 118 0 0 185 V4MAY5 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10026337mg PE=4 SV=1
21 : K4BAJ6_SOLLC 0.63 0.81 2 118 69 185 117 0 0 186 K4BAJ6 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc02g083280.2 PE=4 SV=1
22 : A5C1X2_VITVI 0.62 0.74 2 118 64 175 117 1 5 176 A5C1X2 Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010789 PE=4 SV=1
23 : B6U016_MAIZE 0.62 0.79 1 117 73 189 117 0 0 191 B6U016 Senescence-associated protein DIN1 OS=Zea mays PE=2 SV=1
24 : M5VR65_PRUPE 0.62 0.83 2 118 66 182 117 0 0 183 M5VR65 Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012088mg PE=4 SV=1
25 : Q5Z984_ORYSJ 0.62 0.81 6 118 3 115 113 0 0 116 Q5Z984 Os06g0725000 protein OS=Oryza sativa subsp. japonica GN=P0548E04.8-2 PE=4 SV=1
26 : R0H222_9BRAS 0.62 0.78 1 118 64 181 118 0 0 182 R0H222 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005841mg PE=4 SV=1
27 : V4KMD8_THESL 0.62 0.72 1 118 2 150 149 1 31 152 V4KMD8 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005068mg PE=4 SV=1
28 : DIN1_RAPSA 0.61 0.76 2 118 66 182 117 0 0 183 P27626 Senescence-associated protein DIN1 OS=Raphanus sativus GN=DIN1 PE=2 SV=1
29 : K3XZI9_SETIT 0.61 0.77 1 117 65 181 117 0 0 183 K3XZI9 Uncharacterized protein OS=Setaria italica GN=Si007349m.g PE=4 SV=1
30 : M0V211_HORVD 0.61 0.79 1 118 67 184 118 0 0 185 M0V211 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
31 : M0V212_HORVD 0.61 0.79 1 118 68 185 118 0 0 186 M0V212 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
32 : M0V213_HORVD 0.61 0.79 1 118 20 137 118 0 0 138 M0V213 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
33 : STR15_ARATH 0.61 0.76 1 118 64 181 118 0 0 182 Q38853 Rhodanese-like domain-containing protein 15, chloroplastic OS=Arabidopsis thaliana GN=STR15 PE=2 SV=1
34 : D7MC42_ARALL 0.60 0.76 1 118 65 182 118 0 0 183 D7MC42 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_491067 PE=4 SV=1
35 : I1GV97_BRADI 0.60 0.81 1 118 76 193 118 0 0 195 I1GV97 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G30020 PE=4 SV=1
36 : W5H6N7_WHEAT 0.60 0.80 1 118 44 161 118 0 0 162 W5H6N7 Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
37 : B8B2K3_ORYSI 0.59 0.80 1 118 52 169 118 0 0 170 B8B2K3 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_24507 PE=4 SV=1
38 : F2DWS6_HORVD 0.59 0.78 1 118 73 190 118 0 0 192 F2DWS6 Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1
39 : I1Q5E4_ORYGL 0.59 0.80 1 118 52 169 118 0 0 170 I1Q5E4 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
40 : K3Y1V0_SETIT 0.59 0.78 6 118 18 130 113 0 0 131 K3Y1V0 Uncharacterized protein (Fragment) OS=Setaria italica GN=Si008168m.g PE=4 SV=1
41 : M0TW17_MUSAM 0.59 0.79 1 118 65 182 118 0 0 183 M0TW17 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
42 : Q2TN72_WHEAT 0.59 0.77 1 118 75 192 118 0 0 194 Q2TN72 Senescence-associated protein OS=Triticum aestivum GN=SAP PE=2 SV=1
43 : Q5Z985_ORYSJ 0.59 0.80 1 118 52 169 118 0 0 170 Q5Z985 Putative Ntdin OS=Oryza sativa subsp. japonica GN=P0548E04.8-1 PE=4 SV=1
44 : Q9M4Y8_CUCSA 0.59 0.78 2 118 33 149 117 0 0 150 Q9M4Y8 OP1 OS=Cucumis sativus PE=2 SV=1
45 : W5I036_WHEAT 0.59 0.78 1 118 72 189 118 0 0 191 W5I036 Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
46 : A3BFI8_ORYSJ 0.58 0.80 1 118 52 169 118 0 0 170 A3BFI8 Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_22702 PE=4 SV=1
47 : A9NKQ8_PICSI 0.58 0.78 7 118 5 116 112 0 0 117 A9NKQ8 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
48 : J3MHR8_ORYBR 0.58 0.79 1 118 54 171 118 0 0 172 J3MHR8 Uncharacterized protein OS=Oryza brachyantha GN=OB06G35620 PE=4 SV=1
49 : M0Y6T0_HORVD 0.58 0.79 1 118 73 190 118 0 0 192 M0Y6T0 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
50 : B9GQ61_POPTR 0.56 0.76 1 117 17 133 117 0 0 135 B9GQ61 Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s01630g PE=4 SV=2
51 : C5Z1Z2_SORBI 0.56 0.72 1 117 67 183 117 0 0 185 C5Z1Z2 Putative uncharacterized protein Sb10g030510 OS=Sorghum bicolor GN=Sb10g030510 PE=4 SV=1
52 : M8A3S5_TRIUA 0.52 0.67 1 117 73 204 132 1 15 207 M8A3S5 Uncharacterized protein OS=Triticum urartu GN=TRIUR3_18768 PE=4 SV=1
53 : M8B494_TRIUA 0.52 0.66 1 118 67 166 118 1 18 167 M8B494 Uncharacterized protein OS=Triticum urartu GN=TRIUR3_10076 PE=4 SV=1
54 : K3XZV1_SETIT 0.50 0.70 2 117 25 140 116 0 0 142 K3XZV1 Uncharacterized protein OS=Setaria italica GN=Si007349m.g PE=4 SV=1
55 : K3ZXT6_SETIT 0.50 0.70 1 118 21 139 119 1 1 147 K3ZXT6 Uncharacterized protein OS=Setaria italica GN=Si031418m.g PE=4 SV=1
56 : Q0JEL3_ORYSJ 0.50 0.71 6 118 17 130 114 1 1 138 Q0JEL3 Os04g0249600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0249600 PE=4 SV=1
57 : B6TZV9_MAIZE 0.48 0.68 1 118 26 144 119 1 1 152 B6TZV9 Senescence-associated protein DIN1 OS=Zea mays PE=2 SV=1
58 : B6UI10_MAIZE 0.48 0.69 1 118 26 144 119 1 1 152 B6UI10 Senescence-associated protein DIN1 OS=Zea mays PE=2 SV=1
59 : I1HVZ4_BRADI 0.48 0.62 1 118 17 136 120 2 2 144 I1HVZ4 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI3G00377 PE=4 SV=1
60 : K7TSG6_MAIZE 0.48 0.69 1 118 26 144 119 1 1 152 K7TSG6 Uncharacterized protein OS=Zea mays GN=ZEAMMB73_085243 PE=4 SV=1
61 : M0RUH8_MUSAM 0.47 0.65 1 118 7 121 119 2 5 133 M0RUH8 Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
62 : B8AGV2_ORYSI 0.46 0.68 1 118 12 130 119 1 1 137 B8AGV2 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05463 PE=4 SV=1
63 : I1NWB0_ORYGL 0.46 0.68 1 118 12 130 119 1 1 137 I1NWB0 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
64 : Q0E4S8_ORYSJ 0.46 0.68 1 118 12 130 119 1 1 137 Q0E4S8 Os02g0102300 protein OS=Oryza sativa subsp. japonica GN=Os02g0102300 PE=4 SV=1
65 : Q6YU82_ORYSJ 0.46 0.68 1 118 12 130 119 1 1 137 Q6YU82 Putative senescence-associated protein OS=Oryza sativa subsp. japonica GN=B1370C05.27 PE=2 SV=1
66 : V7CKT1_PHAVU 0.46 0.64 10 118 31 144 114 2 5 152 V7CKT1 Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G107700g PE=4 SV=1
67 : K3YWN9_SETIT 0.43 0.67 1 114 9 123 115 1 1 131 K3YWN9 Uncharacterized protein OS=Setaria italica GN=Si018685m.g PE=4 SV=1
68 : C5XVC2_SORBI 0.40 0.66 1 114 4 118 115 1 1 126 C5XVC2 Putative uncharacterized protein Sb04g003965 (Fragment) OS=Sorghum bicolor GN=Sb04g003965 PE=4 SV=1
69 : D1ME28_MAIZE 0.40 0.65 1 114 8 122 115 1 1 125 D1ME28 Uncharacterized protein OS=Zea mays GN=ZEAMMB73_884233 PE=2 SV=1
70 : M8C547_AEGTA 0.40 0.52 1 118 104 236 151 2 51 237 M8C547 Uncharacterized protein OS=Aegilops tauschii GN=F775_13880 PE=4 SV=1
71 : F6GWL9_VITVI 0.33 0.50 9 117 12 151 140 2 31 159 F6GWL9 Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g03590 PE=4 SV=1
72 : S8CRR1_9LAMI 0.31 0.41 10 118 76 218 143 3 34 221 S8CRR1 Uncharacterized protein OS=Genlisea aurea GN=M569_05283 PE=4 SV=1
73 : A9NUD6_PICSI 0.30 0.41 10 118 85 227 143 3 34 231 A9NUD6 Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 11 A A 0 0 140 49 54 AAAA AAAAA G AA SAAAATAAGEG NEG EG AEGEEA G SSASASSSS SDSA
2 12 A E + 0 0 163 65 48 EEEE EQQEQEEEQEEEEEEHEAE EEADEEEEEEEAAA QAAEAA EAHAAEHS AAAAEEEEE DKDE
3 13 A E + 0 0 155 66 73 EEGGGAVVSVAVANAAEAAANSEA AGAVVVVAAVVDED AGDAED SEHAEVGE AAPAESSSS KEKV
4 14 A S S S+ 0 0 58 66 81 SRRRNVSSTSVVISVGAAAGSTPV ARAEAAAVVAAMVM RVMTVM PVRAVAGK PPVPAPPPP EQEA
5 15 A R + 0 0 124 66 81 RRVVRGTTGTGGRTRRGRRRTGAG RVRVAAAKKAAAAA VAAAAA VATVAAGP PPVPVVVVV QVQA
6 16 A V - 0 0 76 69 49 VVPPVVVVVVVVVVVVVVVVVVVVVIPVPVVVIIVVVVVVVVVVVV PVGPVVAPPPPVPMPPPP VIAV
7 17 A P + 0 0 65 70 49 PPTTPPPPPPPPPPPPPPPPPPPPPPTPPPPPPPPPPPPPPPPPPPPPPPVPPAVVVVTVPVVVV IIVP
8 18 A S E -a 101 0A 38 70 74 SSTTSTTTTTTTTTTTRTTTTTRTRTTTRPPPTTPPRPRRTPRTPRKRPRRPPRAPVVTVRVVVV PPPP
9 19 A S E +a 102 0A 79 70 37 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSAATXAVASTTTT TTTS
10 20 A V E -a 103 0A 36 74 10 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVDVVVVVVIIIIV
11 21 A S E >> -a 104 0A 43 74 56 SSSSSPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPTPPPPPPPDGGGVGADDDDDDDDP
12 22 A V H 3> S+ 0 0 48 74 14 VVVVAVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVPVVVVVVVVVVVVAAAV
13 23 A T H 3> S+ 0 0 92 74 71 TTIIIRRRRRRRRRRRARRRRRRRRRIRRRRRRRRRRRRHRRRRRRQRRHRRRRATAATATAAAARDDDR
14 24 A V H X> S+ 0 0 78 74 53 VVVVDVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVSAAAAAAVAAAAAQQEV
15 25 A A H 3X S+ 0 0 1 74 2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAAAAA
16 26 A H H 3X S+ 0 0 94 74 84 HHHHHHLLLLHHYLYHHRRHLLYHHRHRYYYYRRHYHHHYHYHLYHFYHHYYYAGSSSSSHSSSSKHHHY
17 27 A D H X>S+ 0 0 50 74 3 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTLLLLLLLLLLLLLLLL
19 29 A L H ><5S+ 0 0 33 74 75 LLLLLLLLLLLLLLLALAAALLQLQALAQQQQAAQQQQQQLQQLQQVQQLQQQRVVIIQILIIIIILLLQ
20 30 A L H 3<5S+ 0 0 119 74 79 LLLLQLQQQQQLLQLQEQQQQQQQQQLQQLLLQQLLQLQQQLQQLQQQLQQLLRRGRRQRTTTTTESSSL
21 31 A A H <<5S- 0 0 62 74 42 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAATssssesAssssTSSSA
22 32 A G T <<5 + 0 0 62 73 7 GGGGGGGGGGGGGGGGGGGGG.GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSggggqgGggggGGGGG
23 33 A H < - 0 0 110 73 37 HHHHHHHHHHHHHHHYHYYYH.HHHYHYHHHHYYHHHHHHHHHQHNHYHHHHHLHHHHVHHHHHHSHHHH
24 34 A R - 0 0 154 73 39 RRRRRRRRRRRKRRRRRKKRR.RKRKRKRRRRRRRRRRRRHRRRRRRRRQRRRRRSRRKRRRRRRIGGGR
25 35 A Y E -b 76 0A 13 73 12 YYYYYYYYYYYYYYYYYYYYY.YYYYYHYYYYYYYYYYYYYYYYYYYYYYYYYVYYYYYYYYYYYYYYYY
26 36 A L E +bc 77 43A 15 73 14 LLLLLLLLLLLLLLLLLLLLL.LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALLLLLLLVVVVLIVVL
27 37 A D E -bc 78 44A 0 74 2 DDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDDDDD
28 38 A V E +b 79 0A 7 74 2 VVVVVVVVVVVVVVVVVVVVVHVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
29 39 A R S S- 0 0 111 74 2 RRRRRRRRRRRRRRGRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
30 40 A T >> - 0 0 59 74 18 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTMMMT
31 41 A P H >> S+ 0 0 97 74 67 PPPPPPAAPAPTPAPPEPPPTPEPEPPPEEEEPPEEEEEEVEEPEELEEHEEEEEEEEEEVEEEEVRRRE
32 42 A E H 3> S+ 0 0 145 74 42 EEEEEEEEEEEEEEEDGDDDEEGDGDEDGGGGDDGGGGGSDGGEGGEGGDSGGGEEEEEEKEEEEEEEGG
33 43 A E H <> S+ 0 0 13 74 3 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDE
34 44 A F H << S+ 0 0 77 74 11 FFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFMFFMMMMFFFFF
35 45 A S H < S+ 0 0 101 74 69 SSSSSSSSSSSNDSNSSSSSNSSSASSSSGGGSSGGAAARNAASAANAARSAGSRKRRSRSNNNNLDDHG
36 46 A Q H < S- 0 0 131 74 82 QQQQQADDADAAADAISIIIDAAKGIQIACCCIIGGGGGDAGGVGGAGGAAGGANKSSKSGKKKKKKKKG
37 47 A G < - 0 0 23 74 9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGgGAAG
38 48 A H - 0 0 106 74 5 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHdHHHH
39 49 A A B > -E 42 0B 11 74 60 AAAAAVAAAAAAAAAPAPPPAAPAPPAPPPPPPPPPPPPPAPPAPPVPPPPPPPVVVVLVALLLLAAAAP
40 50 A C T 3 S- 0 0 51 74 83 CCCCTVTPSPTPPAPSVPCSASEPVTCSEAAATTAAVAVETAVPAVEVASEAAEEEEEHEVHRHHVPPPA
41 51 A G T 3 S+ 0 0 50 74 44 GGGGGGGGGGGGGGGSGSSSGGGGGRGRGGGGRRGGGGGRGGGGGGDGGGRGGGDNDDGDENNNNNGGGG
42 52 A A B < -E 39 0B 2 74 33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASSSSSSVSSSSISAAA
43 53 A I E +c 26 0A 70 74 39 IIIIIIIIIIIIIIIIVIIIIIVVVIIIVVVVIIVVVVVVIVVIVVIVVIVVVVLLLLLLCLLLLVRRRV
44 54 A N E +c 27 0A 3 74 4 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNLNNNNNNNNN
45 55 A V - 0 0 18 74 20 VVVVVIIIVIVIIIIAIVVAIVIIIVVVIIIIVVIIIVIIIVIIVIVIVIIVVIVVVVVVCVVVVIVVVI
46 56 A P - 0 0 25 74 6 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
47 57 A Y S S+ 0 0 73 74 8 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYFFFFFYYYYY
48 58 A M + 0 0 4 74 23 MMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMLMMMMMVMMMMMMMMMLMMMLLLLMLLMMMMMYYYM
49 59 A N - 0 0 46 74 63 NKKKNYFFLFYYFLFYFYYYLLNYYYKYNHHHYYYHYYYFLYYYYYFHYLFYHNFFFFFFTFFFFLLLLH
50 60 A R + 0 0 166 74 82 RRRRRRRRRRRKRRRRKRRRRRKKKRRRKSSSRRKSKSKKKSKRSKKKSNRSSKFFFFLFPVVVVNSSSS
51 61 A G S >> S- 0 0 30 74 61 GGGggVIIFIVVVIVVSVVVIFTLTVgVTTTTVVTTTTTTVTTVTTVTTNATTTTTTTtTITTTTtvvvt
52 62 A A T 34 S+ 0 0 117 73 58 AADsaGGGGGGGGGGGNGGGGGGGGGeGGGGGGGGGGGGGGGGGGGGGGGVGGGSPSSqS.PPPPrpppl
53 63 A S T 34 S- 0 0 106 73 55 SSSAFSSSSSSSSSSSSSSSSSSSSSASSSSSSSSSSSSSSSSSSSESSATSSSQQQQGQ.QQQQAQEQA
54 64 A G T <4 S- 0 0 52 73 10 GGGGWGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGSG.GGGGGGGGG
55 65 A M < + 0 0 99 73 51 MMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMMMMLMLMMMLMMLMLMMTMMMRKRRRR.RRKRKKKKM
56 66 A S + 0 0 20 74 79 SSSSSKTIATTTTITVSVVVIATSTVSVTAAAVVTATATMTATTATVTAFTAATEEEEEECEEEEVEEEA
57 67 A K >> - 0 0 108 74 12 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKDKKKKMKKKK
58 68 A N T 34 S+ 0 0 97 74 7 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNN
59 69 A T T 34 S- 0 0 109 74 46 PPPPPTPPPPLSSPSPPPPPPPAPTPPPTSSSPPSSTSTSPSTPPTPTSSTPSTPTPPPPQPPPPPPPPS
60 70 A D T X> S+ 0 0 79 74 80 DDSSNKNNKNKNNNNSNSSSNKHEHSSSHRRRSSQGHHHHKHHHHHNHHKCHCHKKKKEKSLLLLDQHHG
61 71 A F H 3X S+ 0 0 55 74 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFF
62 72 A L H 3> S+ 0 0 46 74 33 LLLLLLLALLVVILILMLLLLLLLLLLLLLLLLLLLLVLLLVLLVLILILLVLLIIIIVINVVVVLEVVL
63 73 A E H <4 S+ 0 0 137 74 51 EEEEEEEEVEEKRERRQRRREVEKEREREEEERREEEKEEVEEAEEEEDEEEKEEEAAEALEEEEKEEEE
64 74 A Q H < S+ 0 0 122 74 37 QQQQQQQQEEEEEEEQEQQQEEQEKQQQQQQQQQQQKQKQEQKEQKEKQEQQQQQQQQQQLQQQQEEEEQ
65 75 A V H >X S+ 0 0 29 74 13 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMFFFFVVVVV
66 76 A S T 3< S+ 0 0 48 74 54 SSSSSSLLSLSSSLSSLSSSLSSASSSSSSSSSSSSSSSASSSASSLSLSASSSAAAAAAQSSSSSAAAS
67 77 A S T 34 S- 0 0 67 74 63 SSSSSSKESETSSESSSSSSESRSTSSSRVVVSSAATATRSATITTSAASSTARALAASAKSSSSLSAAA
68 78 A H T <4 S+ 0 0 152 74 87 HHHHHHHHHRRHQHNHTHHHQHAHTHHHIIIIHHIITITIVITYITHTIQIIIIHHGGLGLLLLLALLFI
69 79 A F < - 0 0 112 74 27 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFYVVVVCFCCF
70 80 A G > - 0 0 15 74 69 GRGGGGGGRGRRRGRRKKRRGRGRGRGRGRRRRRRRGGGGGRGRGGTGGGGGRGDDDDTDDSSSSNGGGR
71 81 A Q T 3 S+ 0 0 43 74 22 QQEEKKKKKKKKKKKKKKKKKKKKKKEKKRRRKKRRKKKKKKKKRKKKKKKRRKKKKKKKNKKKKKKKKR
72 82 A S T 3 S+ 0 0 1 74 47 SSAAGYDDDDHEDDEHDHHHDDDHEHAHDDDDHHDEEDEDDDEDDEDEDDDDEDQEEEDEIEEEEEDDDE
73 83 A D S < S+ 0 0 37 74 17 DDDDDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDQDREEEEDDDDD
74 84 A N S S+ 0 0 127 74 56 NDKKEEEEEEEEEEEEEDEEEEEEEEKEEEEEEEEEEEEDEEEEEEKEEDGEEESNNNHNKHHHHHVVVE
75 85 A I E - d 0 100A 9 74 16 IIIIVIIIIIIVIIIIIIIIIIIIIIIIIFFFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVVVLFFFI
76 86 A I E +bd 25 101A 4 74 11 IIIILIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIVIIIIVIVVLVIVVVVIIIII
77 87 A V E +bd 26 102A 4 74 12 VVVVVIVVVVVVVVVIVIIIVVVVVIVIVIIIIIIIVIVVIVVVIVIVIVIIIVVVVVVVLVVVVVVVVI
78 88 A G E -bd 27 103A 3 74 12 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGlGGGGGGGGgGGGGGGAGG
79 89 A C E -bd 28 104A 24 72 11 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCc.CCCCCCCcCCCCCCCC.
80 90 A Q S S+ 0 0 67 72 53 QLQQQQQQQQQQEQEELEEEQQQHQEQEQQQQEEQQQQQQRQQLQQQQQKQQ.QKLKKQKLQQQQQNNN.
81 91 A S S S- 0 0 47 72 48 SSSSSSLLKLSLLLLSSSSSLKSLSSSSSSSSSSSSSSSSSSSSSSSSSSSS.SSSSSSSSSSSSTTTT.
82 92 A G + 0 0 27 72 6 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG.GGGGGGGGGGGGGGGG.
83 93 A G S > S+ 0 0 47 72 67 GGGGGKKKKKKKKKKQKEEQKKKKKEGEKRRRQQRRKKKRKKKKKKRKKRRK.KVVVVKVKKKKKGNNN.
84 94 A R H > S+ 0 0 199 72 4 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRMMRRRRRRRRRRRRRRRRRR.RRRRRRRRRRRRRRRR.
85 95 A S H > S+ 0 0 14 72 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS.SSSSSSSSSSSSSSSS.
86 96 A I H > S+ 0 0 47 72 60 IFLLLMFFLFMMMFMFSLLFFLLMLFLLLLLLFFLLLLLLLLLLLLLLLLLL.LEEEEEELEEEELRRR.
87 97 A K H X S+ 0 0 141 72 39 KKKKRMMMMMMMMMMMMMMMMMMMMMKMMLLLMMMMMMMMMMMMPMMMMMML.MLLLLLLMLLLLYFFF.
88 98 A A H X S+ 0 0 35 72 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAAAAAAAAAAAA.
89 99 A T H X S+ 0 0 11 72 54 TTTTTAAAVTAAAAASASSSAVAAASTSAAAASSAAAAAAAAAAAAAAAAAA.ACSCCCCACCCCTTTT.
90 100 A T H X S+ 0 0 61 72 68 TAAAATTTNSTTSTSTTTTTTNTTSTATTTTTTTAASVSTAASAASKSASTA.TFAAAIASVVVVAAAA.
91 101 A D H X S+ 0 0 101 72 33 DDEEEDDDDDDDDEDDEEEDEDEDEDEEEEEEDDEEEEEEEEEDQEDEEDEQ.EDDDDDDEDDDDADDD.
92 102 A L H X S+ 0 0 63 72 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL.LLLLLLLLLLLLLLLL.
93 103 A L H X S+ 0 0 54 72 77 LLLLLLLLLLLLLLLLSLLLLLCLCLLLCCCCLLCCCCCYTCCLCCICCQSC.CMIMMLMSLLLLLLVL.
94 104 A H H < S+ 0 0 144 72 72 HDDDDSAAAANAAAATNTTTAASASTDTSSSSTTSSSSSSSSSASSVSSSSS.SAAAAAANEEEESNNN.
95 105 A A H < S- 0 0 66 72 13 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAVAAAAA.AAAAAAAAAAAADAAA.
96 106 A G H < S+ 0 0 32 72 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGG.GGGGGGGGGGGGGGGG.
97 107 A F < + 0 0 19 74 1 FFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFY
98 108 A T + 0 0 24 74 48 TTTTTTTSTTATTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTNTTTTTNTTTTEKRRRRTKKKKKKKKT
99 109 A G S S+ 0 0 6 74 57 GAGGGAGGAGGGGGGAGGGAGAAGAAGGAAAAAAAGAAAAGAAYAAGAAHTAGANNNNNNGNNNNNNNNG
100 110 A V E S- d 0 75A 6 74 13 VVVVVVVVVVILLVLVIVVVVVVIVIVVVVVVIIVVVVVVIVVVVVVVVVVVVVVVVVVVIVVVVVAVVV
101 111 A K E -ad 8 76A 80 74 52 KKTTKTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTKKKKKKTKKKKKRRRT
102 112 A D E -ad 9 77A 15 74 28 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNNNNNDNNNNDNNND
103 113 A I E -ad 10 78A 2 74 25 IIIIIIIIIIIIMIMIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIVVIIIIMIIVIVMMMMMLLLI
104 114 A V E S-ad 11 79A 52 74 45 VSAASAAAAAAAAAAASAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAEEEEGEAGGGGGQQQA
105 115 A G + 0 0 10 74 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
106 116 A G > + 0 0 3 74 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
107 117 A Y H > S+ 0 0 84 74 12 YYYYYYYYYYFYYYYYYYYYYYFYFYYYFFFFYYFYFFFFYYFYFFYFFYFSFFYYYYYYFYYYYYYYYY
108 118 A S H > S+ 0 0 78 74 75 STAASAAADAAAAAAVSVVVADSASVAVSSSSVVSSSSSSSSSESSSSSTSSSSDMTTLTSAAAAARRRS
109 119 A A H >> S+ 0 0 33 74 30 AAAAAAAAAAAAATAAAAAAAATAAAAPSAAAAAAAATASATAATATATASTASAAAAAAAAAAAESSSA
110 120 A W H >X>S+ 0 0 59 74 1 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFFFW
111 121 A A H 3<5S+ 0 0 45 74 88 ADTTATTTSTRTTTTTVTTTTSRTKTTTRRRRTTRKKRKRVRKSRKVRRTRRKRVVVVVVVLLLLSLLQK
112 122 A K H <<5S+ 0 0 161 74 35 KQQQQQEEQEQQQEQEEEEEEQEQEEQEEEEEEEEEEEEEQEEREEQEEEEEEEEEEEDEEDDDDQQQQE
113 123 A N H <<5S- 0 0 80 74 31 NNNNNNNNNNNNNSNNNNNNSNNTNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNNSSNSNNNNNNSSRN
114 124 A G T <5 + 0 0 48 74 36 GGGGGGGGGGGGGGGEGEEEGGEGEEGEEGGGEEGEEGEGRGEGGEGEGGGGEEGGGGGGGGGGGKAAAE
115 125 A L < + 0 0 122 71 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLFFFFF L
116 126 A P - 0 0 72 71 16 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAAAPAPPPPPA P
117 127 A T 0 0 75 71 51 TTTTTTTTTTTTTITVTVVVITTTTVTVIIIIVVVITVTITVTMVTVTIIIVIIVVVVVVTIIIIV I
118 128 A K 0 0 148 64 54 KQQQQEDDDDEEEEEEEEEEED ENEQE KKKEENNNNNNENNENNKNN N KNKKHKENNNNK N
## ALIGNMENTS 71 - 73
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 11 A A 0 0 140 49 54
2 12 A E + 0 0 163 65 48
3 13 A E + 0 0 155 66 73
4 14 A S S S+ 0 0 58 66 81
5 15 A R + 0 0 124 66 81
6 16 A V - 0 0 76 69 49
7 17 A P + 0 0 65 70 49
8 18 A S E -a 101 0A 38 70 74
9 19 A S E +a 102 0A 79 70 37 T
10 20 A V E -a 103 0A 36 74 10 IVV
11 21 A S E >> -a 104 0A 43 74 56 DDE
12 22 A V H 3> S+ 0 0 48 74 14 VVV
13 23 A T H 3> S+ 0 0 92 74 71 HKN
14 24 A V H X> S+ 0 0 78 74 53 AEE
15 25 A A H 3X S+ 0 0 1 74 2 AAA
16 26 A H H 3X S+ 0 0 94 74 84 KLF
17 27 A D H X>S+ 0 0 50 74 3 LLL
19 29 A L H ><5S+ 0 0 33 74 75 TQQ
20 30 A L H 3<5S+ 0 0 119 74 79 NNK
21 31 A A H <<5S- 0 0 62 74 42 See
22 32 A G T <<5 + 0 0 62 73 7 Gng
23 33 A H < - 0 0 110 73 37 YFY
24 34 A R - 0 0 154 73 39 RFV
25 35 A Y E -b 76 0A 13 73 12 YII
26 36 A L E +bc 77 43A 15 73 14 LLL
27 37 A D E -bc 78 44A 0 74 2 DDD
28 38 A V E +b 79 0A 7 74 2 VVV
29 39 A R S S- 0 0 111 74 2 RRR
30 40 A T >> - 0 0 59 74 18 TPR
31 41 A P H >> S+ 0 0 97 74 67 VEE
32 42 A E H 3> S+ 0 0 145 74 42 EAG
33 43 A E H <> S+ 0 0 13 74 3 EEE
34 44 A F H << S+ 0 0 77 74 11 FFF
35 45 A S H < S+ 0 0 101 74 69 KKK
36 46 A Q H < S- 0 0 131 74 82 KQD
37 47 A G < - 0 0 23 74 9 gGY
38 48 A H - 0 0 106 74 5 dHH
39 49 A A B > -E 42 0B 11 74 60 VPP
40 50 A C T 3 S- 0 0 51 74 83 EVK
41 51 A G T 3 S+ 0 0 50 74 44 NGG
42 52 A A B < -E 39 0B 2 74 33 IAA
43 53 A I E +c 26 0A 70 74 39 LVI
44 54 A N E +c 27 0A 3 74 4 NNN
45 55 A V - 0 0 18 74 20 IVV
46 56 A P - 0 0 25 74 6 PQE
47 57 A Y S S+ 0 0 73 74 8 YII
48 58 A M + 0 0 4 74 23 LYY
49 59 A N - 0 0 46 74 63 FRR
50 60 A R + 0 0 166 74 82 TLL
51 61 A G S >> S- 0 0 30 74 61 Tii
52 62 A A T 34 S+ 0 0 117 73 58 Pff
53 63 A S T 34 S- 0 0 106 73 55 ESS
54 64 A G T <4 S- 0 0 52 73 10 EGG
55 65 A M < + 0 0 99 73 51 RTT
56 66 A S + 0 0 20 74 79 LEE
57 67 A K >> - 0 0 108 74 12 KEE
58 68 A N T 34 S+ 0 0 97 74 7 INN
59 69 A T T 34 S- 0 0 109 74 46 PPP
60 70 A D T X> S+ 0 0 79 74 80 EDQ
61 71 A F H 3X S+ 0 0 55 74 0 FFF
62 72 A L H 3> S+ 0 0 46 74 33 LLL
63 73 A E H <4 S+ 0 0 137 74 51 EQE
64 74 A Q H < S+ 0 0 122 74 37 QSD
65 75 A V H >X S+ 0 0 29 74 13 VVV
66 76 A S T 3< S+ 0 0 48 74 54 QER
67 77 A S T 34 S- 0 0 67 74 63 SSS
68 78 A H T <4 S+ 0 0 152 74 87 AKK
69 79 A F < - 0 0 112 74 27 CFL
70 80 A G > - 0 0 15 74 69 SPG
71 81 A Q T 3 S+ 0 0 43 74 22 KKK
72 82 A S T 3 S+ 0 0 1 74 47 EDN
73 83 A D S < S+ 0 0 37 74 17 DTS
74 84 A N S S+ 0 0 127 74 56 HKK
75 85 A I E - d 0 100A 9 74 16 LII
76 86 A I E +bd 25 101A 4 74 11 VII
77 87 A V E +bd 26 102A 4 74 12 VVV
78 88 A G E -bd 27 103A 3 74 12 vaa
79 89 A C E -bd 28 104A 24 72 11 cee
80 90 A Q S S+ 0 0 67 72 53 LGG
81 91 A S S S- 0 0 47 72 48 GQQ
82 92 A G + 0 0 27 72 6 GQQ
83 93 A G S > S+ 0 0 47 72 67 VSS
84 94 A R H > S+ 0 0 199 72 4 RRR
85 95 A S H > S+ 0 0 14 72 0 SSS
86 96 A I H > S+ 0 0 47 72 60 LLL
87 97 A K H X S+ 0 0 141 72 39 AII
88 98 A A H X S+ 0 0 35 72 0 AAA
89 99 A T H X S+ 0 0 11 72 54 AAA
90 100 A T H X S+ 0 0 61 72 68 SYY
91 101 A D H X S+ 0 0 101 72 33 VLL
92 102 A L H X S+ 0 0 63 72 0 LLL
93 103 A L H X S+ 0 0 54 72 77 VVA
94 104 A H H < S+ 0 0 144 72 72 NLL
95 105 A A H < S- 0 0 66 72 13 AND
96 106 A G H < S+ 0 0 32 72 1 GGG
97 107 A F < + 0 0 19 74 1 FYY
98 108 A T + 0 0 24 74 48 KTT
99 109 A G S S+ 0 0 6 74 57 DNT
100 110 A V E S- d 0 75A 6 74 13 VVL
101 111 A K E -ad 8 76A 80 74 52 KYL
102 112 A D E -ad 9 77A 15 74 28 DHY
103 113 A I E -ad 10 78A 2 74 25 MLL
104 114 A V E S-ad 11 79A 52 74 45 GEE
105 115 A G + 0 0 10 74 0 GGG
106 116 A G > + 0 0 3 74 0 GGG
107 117 A Y H > S+ 0 0 84 74 12 YTL
108 118 A S H > S+ 0 0 78 74 75 EYY
109 119 A A H >> S+ 0 0 33 74 30 AAA
110 120 A W H >X>S+ 0 0 59 74 1 WWW
111 121 A A H 3<5S+ 0 0 45 74 88 VFN
112 122 A K H <<5S+ 0 0 161 74 35 EKK
113 123 A N H <<5S- 0 0 80 74 31 TEA
114 124 A G T <5 + 0 0 48 74 36 GGG
115 125 A L < + 0 0 122 71 4 LLL
116 126 A P - 0 0 72 71 16 TPP
117 127 A T 0 0 75 71 51 VSV
118 128 A K 0 0 148 64 54 EE
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 11 A 0 0 0 0 0 0 0 14 47 0 20 2 0 0 0 0 0 12 2 2 49 0 0 1.453 48 0.45
2 12 A 0 0 0 0 0 0 0 0 25 0 2 0 0 5 0 2 8 55 0 5 65 0 0 1.282 42 0.51
3 13 A 18 0 0 0 0 0 0 9 29 2 11 0 0 2 0 3 0 18 3 6 66 0 0 1.943 64 0.27
4 14 A 20 0 2 6 0 0 0 5 21 14 11 5 0 0 9 2 2 5 2 0 66 0 0 2.222 74 0.18
5 15 A 21 0 0 0 0 0 0 12 27 6 0 9 0 0 18 3 3 0 0 0 66 0 0 1.849 61 0.19
6 16 A 67 0 6 1 0 0 0 1 3 22 0 0 0 0 0 0 0 0 0 0 69 0 0 0.993 33 0.51
7 17 A 16 0 3 0 0 0 0 0 1 74 0 6 0 0 0 0 0 0 0 0 70 0 0 0.837 27 0.51
8 18 A 10 0 0 0 0 0 0 0 1 23 6 39 0 0 20 1 0 0 0 0 70 0 0 1.542 51 0.25
9 19 A 1 0 0 0 0 0 0 0 6 0 80 13 0 0 0 0 0 0 0 0 70 0 0 0.666 22 0.62
10 20 A 91 0 7 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 74 0 0 0.388 12 0.89
11 21 A 1 0 0 0 0 0 0 5 1 65 9 1 0 0 0 0 0 1 0 15 74 0 0 1.178 39 0.43
12 22 A 93 0 0 0 0 0 0 0 5 1 0 0 0 0 0 0 0 0 0 0 74 0 0 0.281 9 0.85
13 23 A 0 0 5 0 0 0 0 0 12 0 0 8 0 4 62 1 1 0 1 4 74 0 0 1.348 44 0.29
14 24 A 73 0 1 0 0 0 0 0 16 0 1 0 0 0 0 0 3 4 0 1 74 0 0 0.927 30 0.47
15 25 A 1 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.072 2 0.97
16 26 A 0 12 0 0 3 0 22 1 1 0 12 0 0 38 8 3 0 0 0 0 74 0 0 1.727 57 0.16
17 27 A 0 0 0 0 0 0 0 0 5 0 0 0 0 1 3 0 0 70 0 20 74 0 0 0.885 29 0.68
18 28 A 0 99 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 74 0 0 0.072 2 0.97
19 29 A 4 38 11 0 0 0 0 0 11 0 0 1 0 0 1 0 34 0 0 0 74 0 0 1.462 48 0.25
20 30 A 0 30 0 0 0 0 0 1 0 0 4 7 0 0 7 1 45 3 3 0 74 0 0 1.526 50 0.20
21 31 A 1 0 0 0 0 0 0 0 74 0 18 3 0 0 0 0 0 4 0 0 74 1 12 0.812 27 0.58
22 32 A 0 0 0 0 0 0 0 96 0 0 1 0 0 0 0 0 1 0 1 0 73 0 0 0.217 7 0.92
23 33 A 1 1 0 0 1 0 15 0 0 0 1 0 0 77 0 0 1 0 1 0 73 0 0 0.841 28 0.63
24 34 A 1 0 1 0 1 0 0 4 0 0 1 0 0 1 78 10 1 0 0 0 73 0 0 0.902 30 0.60
25 35 A 1 0 3 0 0 0 95 0 0 0 0 0 0 1 0 0 0 0 0 0 73 0 0 0.269 8 0.88
26 36 A 8 89 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 73 0 0 0.426 14 0.86
27 37 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 97 74 0 0 0.124 4 0.97
28 38 A 99 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 74 0 0 0.072 2 0.97
29 39 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 99 0 0 0 0 0 74 0 0 0.072 2 0.97
30 40 A 0 0 0 4 0 0 0 0 0 1 0 93 0 0 1 0 0 0 0 0 74 0 0 0.312 10 0.82
31 41 A 5 1 0 0 0 0 0 0 5 31 0 3 0 1 4 0 0 49 0 0 74 0 0 1.373 45 0.33
32 42 A 0 0 0 0 0 0 0 32 1 0 3 0 0 0 0 1 0 47 0 15 74 0 0 1.217 40 0.58
33 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 4 74 0 0 0.170 5 0.96
34 44 A 0 0 0 7 91 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.370 12 0.88
35 45 A 0 1 0 0 0 0 0 9 15 0 43 0 0 1 8 5 0 0 12 4 74 0 0 1.733 57 0.30
36 46 A 1 0 11 0 0 0 0 22 19 0 5 0 4 0 0 16 11 0 1 9 74 0 0 2.049 68 0.18
37 47 A 0 0 0 0 0 0 1 96 3 0 0 0 0 0 0 0 0 0 0 0 74 0 2 0.195 6 0.90
38 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 3 74 0 0 0.124 4 0.95
39 49 A 11 7 0 0 0 0 0 0 36 46 0 0 0 0 0 0 0 0 0 0 74 0 0 1.148 38 0.40
40 50 A 15 0 0 0 0 0 0 0 19 15 8 9 9 5 1 1 0 16 0 0 74 0 0 2.101 70 0.17
41 51 A 0 0 0 0 0 0 0 69 0 0 5 0 0 0 8 0 0 1 9 7 74 0 0 1.081 36 0.56
42 52 A 1 0 3 0 0 0 0 0 81 0 15 0 0 0 0 0 0 0 0 0 74 0 0 0.609 20 0.66
43 53 A 36 15 43 0 0 0 0 0 0 0 0 0 1 0 4 0 0 0 0 0 74 0 0 1.202 40 0.60
44 54 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 74 0 0 0.072 2 0.96
45 55 A 51 0 45 0 0 0 0 0 3 0 0 0 1 0 0 0 0 0 0 0 74 0 0 0.858 28 0.80
46 56 A 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 0 1 1 0 0 74 0 0 0.143 4 0.93
47 57 A 0 0 3 0 8 0 89 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.403 13 0.92
48 58 A 1 14 0 78 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.702 23 0.76
49 59 A 0 14 0 0 27 0 32 0 0 0 0 1 0 9 3 5 0 0 8 0 74 0 0 1.730 57 0.36
50 60 A 5 4 0 0 7 0 0 0 0 1 19 1 0 0 38 22 0 0 3 0 74 0 0 1.698 56 0.18
51 61 A 26 1 11 0 3 0 0 9 1 0 1 46 0 0 0 0 0 0 1 0 74 1 11 1.500 50 0.38
52 62 A 1 1 0 0 3 0 0 63 5 12 7 0 0 0 1 0 1 1 1 1 73 0 0 1.402 46 0.42
53 63 A 0 0 0 0 1 0 0 1 7 0 70 1 0 0 0 0 15 4 0 0 73 0 0 1.027 34 0.44
54 64 A 0 0 0 0 0 1 0 95 0 0 1 0 0 0 0 0 0 3 0 0 73 0 0 0.269 8 0.89
55 65 A 0 8 0 67 0 0 0 0 0 0 0 4 0 0 12 8 0 0 0 0 73 0 0 1.068 35 0.49
56 66 A 14 1 4 1 1 0 0 0 18 0 12 26 1 0 0 1 0 20 0 0 74 0 0 1.926 64 0.20
57 67 A 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 93 0 3 0 1 74 0 0 0.337 11 0.87
58 68 A 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 97 0 74 0 0 0.143 4 0.93
59 69 A 0 1 0 0 0 0 0 0 1 59 20 16 0 0 0 0 1 0 0 0 74 0 0 1.102 36 0.54
60 70 A 0 5 0 0 0 0 0 3 0 0 16 0 3 24 4 15 4 4 15 7 74 0 0 2.130 71 0.19
61 71 A 0 1 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.072 2 0.99
62 72 A 18 65 12 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 1 0 74 0 0 1.075 35 0.67
63 73 A 4 1 0 0 0 0 0 0 5 0 0 0 0 0 14 7 3 65 0 1 74 0 0 1.235 41 0.49
64 74 A 0 1 0 0 0 0 0 0 0 0 1 0 0 0 0 8 62 26 0 1 74 0 0 1.023 34 0.63
65 75 A 93 0 0 1 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.281 9 0.86
66 76 A 0 11 0 0 0 0 0 0 18 0 66 0 0 0 1 0 3 1 0 0 74 0 0 1.033 34 0.45
67 77 A 4 3 1 0 0 0 0 0 19 0 49 11 0 0 5 3 0 5 0 0 74 0 0 1.605 53 0.36
68 78 A 1 11 22 0 1 0 1 4 4 0 0 9 0 35 3 3 4 0 1 0 74 0 0 1.980 66 0.13
69 79 A 5 1 0 0 85 0 3 0 0 0 0 0 5 0 0 0 0 0 0 0 74 0 0 0.608 20 0.73
70 80 A 0 0 0 0 0 0 0 45 0 1 7 3 0 0 32 3 0 0 1 8 74 0 0 1.423 47 0.31
71 81 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 78 4 4 1 0 74 0 0 0.765 25 0.77
72 82 A 0 0 1 0 0 0 1 1 4 0 4 0 0 14 0 0 1 28 1 43 74 0 0 1.541 51 0.52
73 83 A 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 0 1 5 1 88 74 0 0 0.562 18 0.83
74 84 A 4 0 0 0 0 0 0 1 0 0 1 0 0 9 0 9 0 61 8 5 74 0 0 1.356 45 0.44
75 85 A 8 3 81 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.675 22 0.83
76 86 A 15 3 82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.540 18 0.89
77 87 A 68 1 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.686 22 0.87
78 88 A 1 1 0 0 0 0 0 93 4 0 0 0 0 0 0 0 0 0 0 0 74 2 5 0.312 10 0.88
79 89 A 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 3 0 0 72 0 0 0.127 4 0.89
80 90 A 0 8 0 0 0 0 0 3 0 0 0 0 0 1 1 7 61 14 4 0 72 0 0 1.318 44 0.47
81 91 A 0 13 0 0 0 0 0 1 0 0 75 6 0 0 0 3 3 0 0 0 72 0 0 0.895 29 0.52
82 92 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 3 0 0 0 72 0 0 0.127 4 0.93
83 93 A 8 0 0 0 0 0 0 11 0 0 3 0 0 0 13 50 6 6 4 0 72 0 0 1.611 53 0.32
84 94 A 0 0 0 3 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 72 0 0 0.127 4 0.96
85 95 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
86 96 A 0 54 3 8 15 0 0 0 0 0 1 0 0 0 4 0 0 14 0 0 72 0 0 1.392 46 0.39
87 97 A 0 19 3 60 4 0 1 0 1 1 0 0 0 0 1 8 0 0 0 0 72 0 0 1.303 43 0.60
88 98 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
89 99 A 3 0 0 0 0 0 0 0 56 0 13 17 13 0 0 0 0 0 0 0 72 0 0 1.245 41 0.46
90 100 A 7 0 1 0 1 0 3 0 29 0 17 38 0 0 0 1 0 0 3 0 72 0 0 1.588 53 0.32
91 101 A 1 3 0 0 0 0 0 0 1 0 0 0 0 0 0 0 3 43 0 49 72 0 0 1.031 34 0.66
92 102 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
93 103 A 4 51 3 6 0 0 1 0 1 0 4 1 26 0 0 0 1 0 0 0 72 0 0 1.456 48 0.23
94 104 A 1 3 0 0 0 0 0 0 25 0 35 11 0 3 0 0 0 6 10 7 72 0 0 1.789 59 0.27
95 105 A 1 0 0 0 0 0 0 0 93 0 1 0 0 0 0 0 0 0 1 3 72 0 0 0.345 11 0.86
96 106 A 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 1 72 0 0 0.073 2 0.98
97 107 A 0 0 0 0 92 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.281 9 0.99
98 108 A 0 0 0 0 0 0 0 0 1 0 3 73 0 0 5 14 0 1 3 0 74 0 0 0.970 32 0.51
99 109 A 0 0 0 0 0 0 1 35 38 0 0 3 0 1 0 0 0 0 20 1 74 0 0 1.331 44 0.43
100 110 A 82 5 11 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.616 20 0.87
101 111 A 0 1 0 0 0 0 1 0 0 0 0 72 0 0 4 22 0 0 0 0 74 0 0 0.816 27 0.47
102 112 A 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 18 80 74 0 0 0.602 20 0.72
103 113 A 7 7 74 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.841 28 0.75
104 114 A 3 0 0 0 0 0 0 11 69 0 4 0 0 0 0 0 4 9 0 0 74 0 0 1.078 35 0.55
105 115 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
106 116 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
107 117 A 0 1 0 0 28 0 68 0 0 0 1 1 0 0 0 0 0 0 0 0 74 0 0 0.797 26 0.87
108 118 A 11 1 0 1 0 0 3 0 26 0 41 7 0 0 4 0 0 3 0 4 74 0 0 1.709 57 0.24
109 119 A 0 0 0 0 0 0 0 0 77 1 9 11 0 0 0 0 0 1 0 0 74 0 0 0.781 26 0.70
110 120 A 0 0 0 0 4 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 0 0.170 5 0.98
111 121 A 15 8 0 0 1 0 0 0 4 0 5 30 0 0 22 11 1 0 1 1 74 0 0 1.940 64 0.12
112 122 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 26 61 0 7 74 0 0 1.050 35 0.65
113 123 A 0 0 0 0 0 0 0 0 1 0 11 3 0 0 1 0 0 1 82 0 74 0 0 0.672 22 0.69
114 124 A 0 0 0 0 0 0 0 66 4 0 0 0 0 0 1 1 0 27 0 0 74 0 0 0.873 29 0.64
115 125 A 0 92 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 0 0 0.290 9 0.96
116 126 A 0 0 0 0 0 0 0 0 8 90 0 1 0 0 0 0 0 0 0 0 71 0 0 0.362 12 0.83
117 127 A 32 0 25 1 0 0 0 0 0 0 1 39 0 0 0 0 0 0 0 0 71 0 0 1.200 40 0.48
118 128 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 17 8 34 31 8 64 0 0 1.497 49 0.46
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 52 53 1 gDs
5 50 54 3 gNFFa
27 52 53 31 gDSGFTMLKLDLCVCICFFFLFLQKKKGVIVNe
52 79 151 15 lSVSYEDENSTCRFQGc
55 22 42 1 sGg
56 17 33 1 sGg
57 22 47 1 sGg
58 22 47 1 sGg
59 22 38 1 eKq
59 52 69 1 tPq
60 22 47 1 sGg
61 75 81 1 gGc
62 22 33 1 sAg
63 22 33 1 sAg
64 22 33 1 sAg
65 22 33 1 sAg
66 29 59 2 gHVd
66 43 75 3 tSKGr
67 52 60 1 vTp
68 52 55 1 vTp
69 52 59 1 vTp
70 52 155 33 tGSATSKSKLLQSDAGMSFRMKFTFSALIKFKFPl
71 30 41 2 gHAd
71 71 84 29 vIFHLISGLNHNKYNLDEFSEIVYLFSMNGc
72 13 88 1 eNn
72 43 119 19 iKEWTAWDIARRAAFAFFGIf
72 70 165 14 aCSSGGTMRPSQNLPe
73 13 97 1 eNg
73 43 128 19 iRDWTAWDIARRAAFAFFGIf
73 70 174 14 aCSAGGTMKPTPNLPe
//