Complet list of 1ti5 hssp file
Complete list of 1ti5.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1TI5
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-10
HEADER PLANT PROTEIN 02-JUN-04 1TI5
COMPND MOL_ID: 1; MOLECULE: PLANT DEFENSIN; CHAIN: A
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: VIGNA RADIATA; ORGANISM_TAXID: 157791;
AUTHOR Y.J.LIU,C.S.CHENG,Y.N.LIU,M.P.HSU,C.S.CHEN,P.C.LYU
DBREF 1TI5 A 1 46 UNP Q6T418 Q6T418_9FABA 28 73
SEQLENGTH 46
NCHAIN 1 chain(s) in 1TI5 data set
NALIGN 52
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A9UKM6_9FABA 1.00 1.00 1 46 28 73 46 0 0 73 A9UKM6 Defensin-like protein OS=Vigna nakashimae PE=4 SV=1
2 : Q6T418_VIGRA1TI5 1.00 1.00 1 46 28 73 46 0 0 73 Q6T418 Plant defensin OS=Vigna radiata GN=D1 PE=1 SV=1
3 : Q9FPG1_VIGRA 0.98 1.00 1 46 28 73 46 0 0 73 Q9FPG1 Cysteine-rich protein OS=Vigna radiata PE=4 SV=1
4 : DEF2_VIGUN 0.74 0.93 1 46 1 46 46 0 0 46 P84920 Defensin-like protein 2 OS=Vigna unguiculata PE=1 SV=1
5 : V7CRL9_PHAVU 0.63 0.87 1 46 28 73 46 0 0 73 V7CRL9 Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G278400g PE=4 SV=1
6 : A9UKM7_9FABA 0.48 0.67 1 46 28 74 48 3 3 74 A9UKM7 Defensin-like protein OS=Vigna nakashimae PE=4 SV=1
7 : C7SI24_THEHA 0.45 0.60 1 46 31 77 47 1 1 77 C7SI24 Defensin-like protein OS=Thellungiella halophila PE=4 SV=1
8 : C7SI25_THEHA 0.45 0.57 1 46 31 77 47 1 1 77 C7SI25 Defensin-like protein OS=Thellungiella halophila PE=4 SV=1
9 : V4K6A7_THESL 0.45 0.60 1 46 31 77 47 1 1 77 V4K6A7 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005228mg PE=4 SV=1
10 : V4KP85_THESL 0.45 0.57 1 46 31 77 47 1 1 77 V4KP85 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005229mg PE=4 SV=1
11 : B1N679_SOLLC 0.43 0.62 1 46 33 79 47 1 1 79 B1N679 Defensin protein OS=Solanum lycopersicum GN=Solyc07g007730.2 PE=4 SV=1
12 : B1N680_SOLLC 0.43 0.60 1 46 30 76 47 1 1 76 B1N680 Defensin protein OS=Solanum lycopersicum GN=Solyc07g007710.2 PE=4 SV=1
13 : B1N683_SOLPI 0.43 0.62 1 46 33 79 47 1 1 79 B1N683 Defensin protein OS=Solanum pimpinellifolium GN=SUNPIM_69t000006 PE=4 SV=1
14 : B1N684_SOLPI 0.43 0.60 1 46 30 76 47 1 1 76 B1N684 Defensin protein OS=Solanum pimpinellifolium GN=SUNPIM_69t000001 PE=4 SV=1
15 : B5TGM9_VICFA 0.43 0.55 3 43 32 73 42 1 1 74 B5TGM9 Fabatin OS=Vicia faba PE=4 SV=1
16 : D9YTD3_ARAHA 0.43 0.60 1 46 9 55 47 1 1 55 D9YTD3 PCP17C2 (Fragment) OS=Arabidopsis halleri PE=4 SV=1
17 : DEF04_ARATH 0.43 0.60 1 46 31 77 47 1 1 77 Q41914 Defensin-like protein 4 OS=Arabidopsis thaliana GN=PDF2.1 PE=2 SV=2
18 : DEF1_VICFA 0.43 0.57 3 43 5 46 42 1 1 47 P81456 Defensin-like protein 1 OS=Vicia faba PE=1 SV=1
19 : DEF2_SORBI 0.43 0.55 1 46 1 47 47 1 1 48 P21924 Defensin-like protein 2 OS=Sorghum bicolor PE=1 SV=1
20 : DEF2_VICFA 0.43 0.57 3 43 5 46 42 1 1 47 P81457 Defensin-like protein 2 OS=Vicia faba PE=1 SV=1
21 : E5F713_9BRAS 0.43 0.60 1 46 30 76 47 1 1 76 E5F713 Putative uncharacterized protein OS=Eutrema parvulum PE=4 SV=1
22 : J3S6X7_VERFO 0.43 0.60 1 46 27 73 47 1 1 73 J3S6X7 Low-molecular-weight cysteine-rich 69 OS=Vernicia fordii GN=LCR69 PE=4 SV=1
23 : K7L494_SOYBN 0.43 0.55 1 46 38 84 47 1 1 84 K7L494 Uncharacterized protein OS=Glycine max PE=4 SV=1
24 : M1D0S9_SOLTU 0.43 0.64 1 46 33 79 47 1 1 79 M1D0S9 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030676 PE=4 SV=1
25 : M1D0T0_SOLTU 0.43 0.60 1 46 12 58 47 1 1 58 M1D0T0 Uncharacterized protein (Fragment) OS=Solanum tuberosum GN=PGSC0003DMG400030677 PE=4 SV=1
26 : M1D0T1_SOLTU 0.43 0.60 1 46 32 78 47 1 1 78 M1D0T1 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400030677 PE=4 SV=1
27 : Q5ZFP2_PLAMJ 0.43 0.55 1 46 26 72 47 1 1 72 Q5ZFP2 Defensin OS=Plantago major GN=dfn1 PE=4 SV=1
28 : R0H8K8_9BRAS 0.43 0.60 1 46 31 77 47 1 1 77 R0H8K8 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10019030mg PE=4 SV=1
29 : A0JJX6_PHAVU 0.40 0.53 1 46 27 73 47 1 1 73 A0JJX6 Gamma-thionin OS=Phaseolus vulgaris GN=PHAVU_009G158000g PE=4 SV=1
30 : B6SL97_MAIZE 0.40 0.55 1 46 33 79 47 1 1 79 B6SL97 Defensin-like protein 1 OS=Zea mays GN=ZEAMMB73_266021 PE=4 SV=1
31 : B9RJ36_RICCO 0.40 0.55 1 46 31 77 47 1 1 77 B9RJ36 Low-molecular-weight cysteine-rich protein LCR69, putative OS=Ricinus communis GN=RCOM_1030650 PE=4 SV=1
32 : C0KQW4_JATCU 0.40 0.62 1 46 31 77 47 1 1 77 C0KQW4 Low-molecular-weight cysteine-rich 69 OS=Jatropha curcas PE=4 SV=1
33 : D2D958_JATCU 0.40 0.62 1 46 31 77 47 1 1 77 D2D958 Defensin OS=Jatropha curcas PE=4 SV=1
34 : D7LQ02_ARALL 0.40 0.55 1 46 31 77 47 1 1 77 D7LQ02 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_484136 PE=4 SV=1
35 : D7MPR3_ARALL 0.40 0.47 1 46 27 73 47 1 1 73 D7MPR3 Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_686079 PE=4 SV=1
36 : D9YTF1_ARAHA 0.40 0.57 1 46 9 55 47 1 1 55 D9YTF1 PCP17C2 (Fragment) OS=Arabidopsis halleri PE=4 SV=1
37 : DEF01_ARATH 0.40 0.55 1 46 31 77 47 1 1 77 Q9ZUL7 Defensin-like protein 1 OS=Arabidopsis thaliana GN=PDF2.3 PE=2 SV=1
38 : DEF06_ARATH 0.40 0.49 1 46 27 73 47 1 1 73 Q9FFP8 Defensin-like protein 6 OS=Arabidopsis thaliana GN=PDF2.5 PE=3 SV=1
39 : DEF1_MAIZE 0.40 0.55 1 46 1 47 47 1 1 47 P81008 Defensin-like protein 1 OS=Zea mays PE=1 SV=1
40 : DEF1_VIGUN 0.40 0.57 1 46 1 47 47 1 1 47 P83399 Defensin-like protein 1 OS=Vigna unguiculata PE=1 SV=1
41 : DEF_NELNU 0.40 0.57 1 46 31 77 47 1 1 77 A3FPF2 Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1
42 : I1K554_SOYBN 0.40 0.68 1 46 28 74 47 1 1 74 I1K554 Uncharacterized protein OS=Glycine max PE=4 SV=1
43 : K4D4N9_SOLLC 0.40 0.51 1 46 30 76 47 1 1 76 K4D4N9 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc11g006260.1 PE=4 SV=1
44 : K7KVC7_SOYBN 0.40 0.51 1 46 30 76 47 1 1 76 K7KVC7 Uncharacterized protein OS=Glycine max PE=4 SV=1
45 : M4DLP0_BRARP 0.40 0.55 1 46 31 77 47 1 1 77 M4DLP0 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA017421 PE=4 SV=1
46 : M4E7S6_BRARP 0.40 0.57 1 46 31 77 47 1 1 77 M4E7S6 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA024832 PE=4 SV=1
47 : Q39894_SOYBN 0.40 0.51 1 46 29 75 47 1 1 75 Q39894 Seed-specific low molecular weight sulfur-rich protein OS=Glycine max PE=4 SV=1
48 : Q9FUP3_PHACN 0.40 0.53 1 46 27 73 47 1 1 73 Q9FUP3 Kunitz trypsin inhibitor protein OS=Phaseolus coccineus GN=SRB13 PE=4 SV=1
49 : R0H6Z2_9BRAS 0.40 0.57 1 46 31 77 47 1 1 77 R0H6Z2 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018340mg PE=4 SV=1
50 : T1SRR1_BRANA 0.40 0.57 1 46 30 76 47 1 1 76 T1SRR1 Defensin OS=Brassica napus GN=def7 PE=4 SV=1
51 : V4KNP0_THESL 0.40 0.49 1 46 27 73 47 1 1 73 V4KNP0 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10005235mg PE=4 SV=1
52 : V7AZZ7_PHAVU 0.40 0.51 1 46 99 145 47 1 1 145 V7AZZ7 Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_009G158100g PE=4 SV=1
## ALIGNMENTS 1 - 52
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A R 0 0 238 50 10 RRRKKKRRRRRRRR RR R RRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRR
2 2 A T - 0 0 48 50 48 TTTTTTTKTKTTTT TT V TTDTTTKTVVTTTTTTTTVVTDVVTTVVTTMH
3 3 A a E -A 44 0A 52 53 3 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCRCCCCCCCCCCCCCCCC
4 4 A M E -A 43 0A 120 53 74 MMMMFTEEEEEEEEKEAKMKEESEEEREEREEEEQEEQREELMEEEEEEEQE
5 5 A I E -A 42 0A 63 53 57 IIITTTSSSSSSSSVSSVGVSSSSSSSSSRSSSSSSSSRSSTSSSSSSSSSS
6 6 A K E -A 41 0A 125 53 45 KKKKKKKKKKQQQQKQQKKKQQKQQQAKQRQQQKKQKKRQQRPQKKQQKKKK
7 7 A K >> + 0 0 25 53 36 KKKKKNSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSRSSSSSSSSSS
8 8 A E G >4 + 0 0 144 53 49 EEEEEEHHHHNHNHNHQNANHHHHNNHHHAHHHHHHHHAHHHHHHHHHHHHH
9 9 A G G 34 S+ 0 0 72 53 76 GGGGGERRRRSHSHRRRRGRRKGSRRRRGGKKKRHRRHGGRGSGKRGGRRHR
10 10 A W G <4 S- 0 0 87 53 5 WWWWWWFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFF
11 11 A G << - 0 0 31 53 57 GGGGGakkkkkkkknkkhknkkkkkkkkkkkkkkkkkkkkkqhhrkhkkkkk
12 12 A K - 0 0 164 53 83 KKKRRrakaktntnptkplpktlptttkavtttpmtpmvaarplptlattmm
13 13 A b - 0 0 16 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 14 A L S S+ 0 0 128 53 51 LLLLIILLLLVLVLLVVLMLLLFVVVLFTMLLLVTVVTMTLLWNVVNTLVWL
15 15 A I S S- 0 0 78 53 72 IIIIAdSSSSRSRSTSSTRTSSSGRRSSGSSSSSSSSSSGSFHRSSRGSSSS
16 16 A D S > S+ 0 0 109 53 34 DDDDDeEEEEDDDDDADDDDDEDDDDDEDDTEETSATNDDDDDDRSDDESDD
17 17 A T H > S+ 0 0 99 53 70 TTTTFGTTTTSTSTTSTTQTGTTTSSTTHHTTTHHSHHHHTRHHHTHHSTHR
18 18 A T H > S+ 0 0 56 53 41 TTTTTTNNNNNNNNHNNHNHNNNNNNNNNNNNNNNNNNNNNQNNNNNNNNNN
19 19 A c H > S+ 0 0 4 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
20 20 A A H X S+ 0 0 14 53 39 AAAAAQKKKKAGAGSAESASGAAAAAAKAAAAAAAAAAAAAAAAAGAAKGAA
21 21 A H H X S+ 0 0 119 53 85 HHHHRTNNNNTSTSTNNTQTNSHSTTSNLQNNNNINNIQLSHILNNLLNNIS
22 22 A S H X S+ 0 0 51 53 41 SSSSSWVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVVVVVIV
23 23 A d H >X>S+ 0 0 0 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
24 24 A K H >X5S+ 0 0 124 53 60 KKKRRRHHHHQRQRRHHRLRHKRQQQKHRLKKKHRHHRLRQRRRHHRRHHRH
25 25 A N H 3<5S+ 0 0 124 53 55 NNNKNNNNNNTTTTGNNGQGNTTTTTTNNQTTTNNNNNQNTSNNNNNNNNNL
26 26 A R H <<5S- 0 0 164 53 38 RRRYVGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEE
27 27 A G H <<5S+ 0 0 60 53 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
28 28 A Y << - 0 0 59 53 4 YYYYYYFFFFFFFFYFFYWYFFFFFFFFFYFFFFFFFFYFFFFFFFFFFFFF
29 29 A I S S- 0 0 74 53 85 IIIMIQRTRTITITKIPKGKGTTIIIPTSGHTTGSIGSGSPISSHGSSQGST
30 30 A G E -B 43 0A 8 53 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGG
31 31 A G E -B 42 0A 10 53 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
32 32 A N E -B 41 0A 50 53 55 NNDKKWNNNNNNNNDNDDNDKDDDNNDNNNRDDKRNKRNNDQNRKKRNNKRN
33 33 A b E -B 40 0A 17 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A K E >> -B 39 0A 89 53 50 KKKQQRRRRRRRRRHRRHDHRRGRRRKRRDRRRRHRRHDRKRVKRRKRRRRR
35 35 A G T 45S+ 0 0 30 52 0 GGGGG.GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
36 36 A M T 45S+ 0 0 182 53 44 MMMILGLFLFFFFFFFFLVLFLFLFFLFFIFLLFFFFFIFAPIFFFFFFFFF
37 37 A T T 45S- 0 0 73 53 59 TTTTTPRRRRRRRRRRRRMRRRRRRRRRRMRRRRHRRHMRRLQRRRRRRRHR
38 38 A R T <5 + 0 0 159 53 5 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRLRRRRRRRRR
39 39 A T E < - B 0 34A 19 53 41 TTTRRSRRRRRRRRRRRRQRRRRQRRRRRQRRRRRRRRQRRKKRRRRRRRRR
40 40 A c E - B 0 33A 3 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
41 41 A Y E -AB 6 32A 43 53 32 YYYYFYFFFFFFFFMFFMKMFFFFFFFFFKFFFYYFYYKFFFYFYYFFFYYF
42 42 A d E -AB 5 31A 0 53 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
43 43 A L E -AB 4 30A 36 53 60 LLLLVLTTTTTTTTLTTLILTTTTTTETTITTTTTTTTITVSTTTTTTTTTT
44 44 A V E -A 3 0A 35 50 58 VVVLLVRRRRRRRR RR R RRRRRRTRKRKRRRRRRRRLKRKRRRRKRRRR
45 45 A N 0 0 132 50 70 NNNNNNNNNNNNNN NN Q NNINNNHHIEHHHHLNHLQKPPLIHHIIHHLH
46 46 A a 0 0 102 50 0 CCCCCCCCCCCCCC CC C CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 8 0 0 0 0 50 0 0 0.279 9 0.89
2 2 A 18 0 0 2 0 0 0 0 0 0 0 68 0 2 0 6 0 0 0 4 50 0 0 1.025 34 0.51
3 3 A 0 0 0 0 0 0 0 0 0 0 0 0 98 0 2 0 0 0 0 0 53 0 0 0.094 3 0.96
4 4 A 0 2 0 13 2 0 0 0 2 0 2 2 0 0 6 6 6 60 0 0 53 0 0 1.434 47 0.26
5 5 A 6 0 8 0 0 0 0 2 0 0 74 8 0 0 4 0 0 0 0 0 53 0 0 0.977 32 0.43
6 6 A 0 0 0 0 0 0 0 0 2 2 0 0 0 0 6 51 40 0 0 0 53 0 0 1.023 34 0.54
7 7 A 0 0 0 0 0 0 0 0 0 0 83 2 0 0 2 11 0 0 2 0 53 0 0 0.626 20 0.64
8 8 A 0 0 0 0 0 0 0 0 6 0 0 0 0 66 0 0 2 13 13 0 53 0 0 1.046 34 0.50
9 9 A 0 0 0 0 0 0 0 30 0 0 8 0 0 9 42 9 0 2 0 0 53 0 0 1.442 48 0.24
10 10 A 0 0 0 0 85 13 2 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.481 16 0.95
11 11 A 0 0 0 0 0 0 0 11 2 0 0 0 0 8 2 72 2 0 4 0 53 0 47 1.029 34 0.43
12 12 A 4 8 0 8 0 0 0 0 11 15 0 26 0 0 8 17 0 0 4 0 53 0 0 2.017 67 0.17
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
14 14 A 25 45 4 6 4 4 0 0 0 0 0 9 0 0 0 0 0 0 4 0 53 0 0 1.583 52 0.49
15 15 A 0 0 9 0 2 0 0 8 2 0 57 6 0 2 13 0 0 0 0 2 53 0 1 1.469 49 0.27
16 16 A 0 0 0 0 0 0 0 0 4 0 6 6 0 0 2 0 0 19 2 62 53 0 0 1.208 40 0.66
17 17 A 0 0 0 0 2 0 0 4 0 0 13 49 0 26 4 0 2 0 0 0 53 0 0 1.366 45 0.29
18 18 A 0 0 0 0 0 0 0 0 0 0 0 13 0 6 0 0 2 0 79 0 53 0 0 0.689 23 0.58
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
20 20 A 0 0 0 0 0 0 0 9 70 0 6 0 0 0 0 11 2 2 0 0 53 0 0 1.033 34 0.61
21 21 A 0 9 8 0 0 0 0 0 0 0 13 15 0 13 2 0 6 0 34 0 53 0 0 1.842 61 0.15
22 22 A 83 0 4 0 0 2 0 0 0 0 11 0 0 0 0 0 0 0 0 0 53 0 0 0.600 20 0.58
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
24 24 A 0 6 0 0 0 0 0 0 0 0 0 0 0 30 36 17 11 0 0 0 53 0 0 1.440 48 0.40
25 25 A 0 2 0 0 0 0 0 6 0 0 2 26 0 0 0 2 6 0 57 0 53 0 0 1.224 40 0.44
26 26 A 2 0 0 0 0 0 2 2 0 0 0 0 0 0 8 0 0 85 0 2 53 0 0 0.634 21 0.62
27 27 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
28 28 A 0 0 0 0 75 2 23 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.624 20 0.96
29 29 A 0 0 25 2 0 0 0 15 0 6 17 19 0 4 4 6 4 0 0 0 53 0 0 2.017 67 0.14
30 30 A 0 0 0 0 0 0 0 98 2 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.094 3 0.98
31 31 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
32 32 A 0 0 0 0 0 2 0 0 0 0 0 0 0 0 11 15 2 0 47 23 53 0 0 1.373 45 0.45
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
34 34 A 2 0 0 0 0 0 0 2 0 0 0 0 0 9 62 15 4 0 0 6 53 1 0 1.239 41 0.49
35 35 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0.000 0 1.00
36 36 A 2 19 8 8 58 0 0 2 2 2 0 0 0 0 0 0 0 0 0 0 53 0 0 1.318 43 0.56
37 37 A 0 2 0 6 0 0 0 0 0 2 0 11 0 6 72 0 2 0 0 0 53 0 0 1.035 34 0.40
38 38 A 0 2 0 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 53 0 0 0.094 3 0.94
39 39 A 0 0 0 0 0 0 0 0 0 0 2 8 0 0 79 4 8 0 0 0 53 0 0 0.773 25 0.59
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
41 41 A 0 0 0 6 60 0 28 0 0 0 0 0 0 0 0 6 0 0 0 0 53 0 0 0.987 32 0.68
42 42 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 53 0 0 0.000 0 1.00
43 43 A 4 17 6 0 0 0 0 0 0 0 2 70 0 0 0 0 0 2 0 0 53 0 0 0.988 32 0.39
44 44 A 10 6 0 0 0 0 0 0 0 0 0 2 0 0 72 10 0 0 0 0 50 0 0 0.944 31 0.42
45 45 A 0 8 10 0 0 0 0 0 0 4 0 0 0 24 0 2 4 2 46 0 50 0 0 1.546 51 0.30
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 50 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
6 12 39 1 aGr
6 16 44 1 dYe
7 12 42 1 kGa
8 12 42 1 kGk
9 12 42 1 kGa
10 12 42 1 kGk
11 12 44 1 kGt
12 12 41 1 kGn
13 12 44 1 kGt
14 12 41 1 kGn
15 10 41 1 nGp
16 12 20 1 kGt
17 12 42 1 kGk
18 10 14 1 hGp
19 12 12 1 kGl
20 10 14 1 nGp
21 12 41 1 kGk
22 12 38 1 kGt
23 12 49 1 kGl
24 12 44 1 kGp
25 12 23 1 kGt
26 12 43 1 kGt
27 12 37 1 kGt
28 12 42 1 kGk
29 12 38 1 kGa
30 12 44 1 kGv
31 12 42 1 kGt
32 12 42 1 kGt
33 12 42 1 kGt
34 12 42 1 kGp
35 12 38 1 kYm
36 12 20 1 kGt
37 12 42 1 kGp
38 12 38 1 kYm
39 12 12 1 kGv
40 12 12 1 kGa
41 12 42 1 kGa
42 12 39 1 qGr
43 12 41 1 hGp
44 12 41 1 hGl
45 12 42 1 rGp
46 12 42 1 kGt
47 12 40 1 hGl
48 12 38 1 kGa
49 12 42 1 kGt
50 12 41 1 kGt
51 12 38 1 kHm
52 12 110 1 kGm
//