Complet list of 1t4n hssp file
Complete list of 1t4n.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1T4N
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-09
HEADER HYDROLASE 30-APR-04 1T4N
COMPND MOL_ID: 1; MOLECULE: RIBONUCLEASE III; CHAIN: A; FRAGMENT: DSRBD; SYNO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; ORGANISM_COM
AUTHOR N.LEULLIOT,S.QUEVILLON-CHERUEL,M.GRAILLE,H.VAN TILBEURGH, T.C.LEEPER,K
DBREF 1T4N A 364 447 UNP Q02555 RNT1_YEAST 364 447
SEQLENGTH 88
NCHAIN 1 chain(s) in 1T4N data set
NALIGN 53
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A6ZMV2_YEAS7 1.00 1.00 2 85 364 447 84 0 0 471 A6ZMV2 Conserved protein OS=Saccharomyces cerevisiae (strain YJM789) GN=RNT1 PE=4 SV=1
2 : B3LMC7_YEAS1 1.00 1.00 2 85 364 447 84 0 0 471 B3LMC7 Ribonuclease III OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_02134 PE=4 SV=1
3 : C7GRB2_YEAS2 1.00 1.00 2 85 364 447 84 0 0 471 C7GRB2 Rnt1p OS=Saccharomyces cerevisiae (strain JAY291) GN=RNT1 PE=4 SV=1
4 : E7KGY5_YEASA 1.00 1.00 2 85 364 447 84 0 0 471 E7KGY5 Rnt1p OS=Saccharomyces cerevisiae (strain AWRI796) GN=AWRI796_3821 PE=4 SV=1
5 : E7KSZ9_YEASL 1.00 1.00 2 78 364 440 77 0 0 441 E7KSZ9 Rnt1p (Fragment) OS=Saccharomyces cerevisiae (strain Lalvin QA23) GN=QA23_3814 PE=4 SV=1
6 : E7Q861_YEASB 1.00 1.00 2 85 364 447 84 0 0 471 E7Q861 Rnt1p OS=Saccharomyces cerevisiae (strain FostersB) GN=FOSTERSB_3830 PE=4 SV=1
7 : G2WKU7_YEASK 1.00 1.00 2 85 364 447 84 0 0 471 G2WKU7 K7_Rnt1p OS=Saccharomyces cerevisiae (strain Kyokai no. 7 / NBRC 101557) GN=K7_RNT1 PE=4 SV=1
8 : H0GLE2_9SACH 1.00 1.00 2 85 364 447 84 0 0 471 H0GLE2 Rnt1p OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_3878 PE=4 SV=1
9 : N1P5W6_YEASC 1.00 1.00 2 85 364 447 84 0 0 471 N1P5W6 Rnt1p OS=Saccharomyces cerevisiae (strain CEN.PK113-7D) GN=CENPK1137D_280 PE=4 SV=1
10 : RNT1_YEAST 1T4N 1.00 1.00 2 85 364 447 84 0 0 471 Q02555 Ribonuclease 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RNT1 PE=1 SV=1
11 : W7PNV3_YEASX 1.00 1.00 2 85 364 447 84 0 0 471 W7PNV3 Rnt1p OS=Saccharomyces cerevisiae R008 GN=Rnt1 PE=4 SV=1
12 : C8ZFA4_YEAS8 0.99 1.00 2 85 364 447 84 0 0 471 C8ZFA4 Rnt1p OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=EC1118_1M3_4412g PE=4 SV=1
13 : H0GZL4_9SACH 0.95 1.00 2 85 367 450 84 0 0 474 H0GZL4 Rnt1p OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_9290 PE=4 SV=1
14 : J6EIF0_SACK1 0.95 1.00 2 85 367 450 84 0 0 474 J6EIF0 RNT1-like protein OS=Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889) GN=YMR239C PE=4 SV=1
15 : G8ZPB5_TORDC 0.71 0.89 4 85 357 438 82 0 0 481 G8ZPB5 Uncharacterized protein OS=Torulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866) GN=TDEL0B03300 PE=4 SV=1
16 : W0VVB9_ZYGBA 0.71 0.89 2 85 351 434 84 0 0 462 W0VVB9 Related to Ribonuclease 3 OS=Zygosaccharomyces bailii ISA1307 GN=ZbRNT1 PE=4 SV=1
17 : S6F1G3_ZYGB2 0.70 0.89 2 85 351 434 84 0 0 462 S6F1G3 BN860_14026g1_1 OS=Zygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227) GN=BN860_14026g PE=4 SV=1
18 : W0VL83_ZYGBA 0.70 0.88 2 85 351 434 84 0 0 462 W0VL83 Related to Ribonuclease 3 OS=Zygosaccharomyces bailii ISA1307 GN=ZbRNT1 PE=4 SV=1
19 : C5DYE3_ZYGRC 0.69 0.89 2 85 345 428 84 0 0 456 C5DYE3 ZYRO0F12342p OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) GN=ZYRO0F12342g PE=4 SV=1
20 : H2AQJ8_KAZAF 0.63 0.87 2 85 451 534 84 0 0 623 H2AQJ8 Uncharacterized protein OS=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) GN=KAFR0B03510 PE=4 SV=1
21 : A7TI15_VANPO 0.62 0.85 2 85 352 435 84 0 0 478 A7TI15 Putative uncharacterized protein OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_1045p6 PE=4 SV=1
22 : G0WHL2_NAUDC 0.62 0.83 2 85 381 464 84 0 0 517 G0WHL2 Uncharacterized protein OS=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) GN=NDAI0K00820 PE=4 SV=1
23 : M9MZN0_ASHG1 0.62 0.81 2 85 386 469 84 0 0 485 M9MZN0 FAFR538Cp OS=Ashbya gossypii (strain FDAG1) GN=FAGOS_FAFR538C PE=4 SV=1
24 : Q752N6_ASHGO 0.62 0.81 2 85 386 469 84 0 0 485 Q752N6 AFR538Cp OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AGOS_AFR538C PE=4 SV=2
25 : G8BXE9_TETPH 0.61 0.80 2 85 362 445 84 0 0 486 G8BXE9 Uncharacterized protein OS=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) GN=TPHA0I00710 PE=4 SV=1
26 : Q6FJM4_CANGA 0.61 0.85 2 85 336 419 84 0 0 449 Q6FJM4 Strain CBS138 chromosome M complete sequence OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0M05159g PE=4 SV=1
27 : R9XC42_ASHAC 0.61 0.82 2 85 397 480 84 0 0 499 R9XC42 AaceriAFR538Cp OS=Ashbya aceri GN=AACERI_AaceriAFR538C PE=4 SV=1
28 : W0THH5_KLUMA 0.61 0.81 2 85 332 415 84 0 0 464 W0THH5 Ribonuclease 3 OS=Kluyveromyces marxianus DMKU3-1042 GN=KLMA_60283 PE=4 SV=1
29 : G0VC61_NAUCC 0.60 0.81 5 85 511 593 83 1 2 675 G0VC61 Uncharacterized protein OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=NCAS0C00790 PE=4 SV=1
30 : G8JMJ0_ERECY 0.60 0.79 2 85 401 484 84 0 0 507 G8JMJ0 Uncharacterized protein OS=Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) GN=Ecym_1482 PE=4 SV=1
31 : Q6CIQ4_KLULA 0.60 0.80 3 85 355 437 83 0 0 478 Q6CIQ4 KLLA0F24816p OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0F24816g PE=4 SV=1
32 : C5E3P1_LACTC 0.58 0.85 1 85 349 433 85 0 0 494 C5E3P1 KLTH0H15180p OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=KLTH0H15180g PE=4 SV=1
33 : I2GYC7_TETBL 0.57 0.83 2 85 368 451 84 0 0 481 I2GYC7 Uncharacterized protein OS=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) GN=TBLA0B02870 PE=4 SV=1
34 : J7SAG7_KAZNA 0.57 0.79 2 85 341 424 84 0 0 469 J7SAG7 Uncharacterized protein OS=Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0J00680 PE=4 SV=1
35 : K0KG02_WICCF 0.47 0.62 2 86 421 506 86 1 1 617 K0KG02 Ribonuclease 3 OS=Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) GN=BN7_3644 PE=4 SV=1
36 : Q6FQ28_CANGA 0.42 0.65 2 77 583 659 77 1 1 734 Q6FQ28 Strain CBS138 chromosome I complete sequence OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0I09636g PE=4 SV=1
37 : W1QEE3_OGAPD 0.42 0.67 1 86 302 386 86 1 1 503 W1QEE3 Ribonuclease III OS=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) GN=HPODL_03688 PE=3 SV=1
38 : C4Y7B5_CLAL4 0.41 0.71 4 83 212 290 80 1 1 406 C4Y7B5 Putative uncharacterized protein OS=Clavispora lusitaniae (strain ATCC 42720) GN=CLUG_04049 PE=3 SV=1
39 : H8X7B3_CANO9 0.41 0.61 4 85 413 493 82 1 1 631 H8X7B3 Dicer RNAse OS=Candida orthopsilosis (strain 90-125) GN=CORT_0E04560 PE=4 SV=1
40 : C5MI44_CANTT 0.37 0.63 2 84 400 481 83 1 1 623 C5MI44 Putative uncharacterized protein OS=Candida tropicalis (strain ATCC MYA-3404 / T1) GN=CTRG_05737 PE=3 SV=1
41 : Q6BX76_DEBHA 0.37 0.67 2 83 338 418 82 1 1 540 Q6BX76 DEHA2B05302p OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2B05302g PE=4 SV=2
42 : G8B9F2_CANPC 0.35 0.61 4 85 382 462 82 1 1 600 G8B9F2 Putative uncharacterized protein OS=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) GN=CPAR2_302410 PE=3 SV=1
43 : G8YTN7_PICSO 0.35 0.60 2 86 309 392 85 1 1 513 G8YTN7 Piso0_000321 protein OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_000321 PE=3 SV=1
44 : G8YV44_PICSO 0.35 0.60 2 86 309 392 85 1 1 513 G8YV44 Piso0_000321 protein OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_000321 PE=3 SV=1
45 : A3LS79_PICST 0.34 0.65 2 83 358 437 82 2 2 566 A3LS79 Predicted protein OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545) GN=PICST_30953 PE=3 SV=1
46 : A5E7T6_LODEL 0.34 0.54 2 83 506 586 82 1 1 729 A5E7T6 Putative uncharacterized protein OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LELG_05675 PE=4 SV=1
47 : G3AE31_SPAPN 0.34 0.57 2 83 328 408 82 1 1 532 G3AE31 Putative uncharacterized protein OS=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) GN=SPAPADRAFT_58792 PE=3 SV=1
48 : G3B622_CANTC 0.34 0.65 2 83 377 457 82 1 1 573 G3B622 Putative uncharacterized protein OS=Candida tenuis (strain ATCC 10573 / BCRC 21748 / CBS 615 / JCM 9827 / NBRC 10315 / NRRL Y-1498 / VKM Y-70) GN=CANTEDRAFT_94123 PE=4 SV=1
49 : C4YGZ2_CANAW 0.33 0.55 2 84 392 473 83 1 1 611 C4YGZ2 Putative uncharacterized protein OS=Candida albicans (strain WO-1) GN=CAWG_03333 PE=3 SV=1
50 : Q5A694_CANAL 0.33 0.55 2 84 392 473 83 1 1 611 Q5A694 Probable ribonuclease III OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNT1 PE=3 SV=1
51 : Q5A6H5_CANAL 0.33 0.55 2 84 392 473 83 1 1 611 Q5A6H5 Probable ribonuclease III OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RNT1 PE=3 SV=1
52 : A5DC21_PICGU 0.31 0.59 1 86 321 405 86 1 1 525 A5DC21 Putative uncharacterized protein OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) GN=PGUG_00826 PE=3 SV=2
53 : B9WGE5_CANDC 0.31 0.54 2 84 392 473 83 1 1 611 B9WGE5 RNAse III, putative OS=Candida dubliniensis (strain CD36 / ATCC MYA-646 / CBS 7987 / NCPF 3949 / NRRL Y-17841) GN=CD36_44470 PE=3 SV=1
## ALIGNMENTS 1 - 53
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 363 A M 0 0 193 4 41 V L I
2 364 A D + 0 0 78 48 36 DDDDDDDDDDDDDD EEEENEEDDDNDK D NDDSNK EE EEEDEEEEEKD
3 365 A K S S+ 0 0 148 49 72 KKKKKKKKKKKKKK NNNDENTEENNEE EEENSENN PE EESPPEPPPEP
4 366 A L S S- 0 0 109 53 36 LLLLLLLLLLLLLLVVVVLLIKVVLLVV VVVLTFILILLIIVVVLIVIIIVI
5 367 A D > - 0 0 5 54 27 DDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDNNRNNNDDNDNNNDNNDDDND
6 368 A M H > S+ 0 0 68 54 80 MMMMMMMMMMMMMMLLLLLILVVVLMVVVVVIPFAMNKKNKKRKKRRKRRRKR
7 369 A N H > S+ 0 0 77 54 35 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNDDENDEDDEDDDEEEDE
8 370 A A H > S+ 0 0 3 54 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
9 371 A K H X S+ 0 0 80 54 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
10 372 A R H X S+ 0 0 170 54 73 RRRRRRRRRRRRRRRRRRRRRRKKKRKKRKKKKRMTATTSSTTTSASSSSSAS
11 373 A Q H X S+ 0 0 87 54 60 QQQQQQQQQQQQQQQQQQQRQETTEKTTLTTTEEEQQEEEEEEEEEKEKKKEK
12 374 A L H >X>S+ 0 0 0 54 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 375 A Y H 3<5S+ 0 0 110 54 6 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYEYYYYYYYYYYYYYYYYY
14 376 A S H 3<5S+ 0 0 73 54 24 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSKASASSASSSSSSGGGSA
15 377 A L H <<5S- 0 0 54 54 9 LLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLLLLLLLLIMTLLLLLL
16 378 A I T <5S+ 0 0 0 54 5 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILIVIIIIIIVIIVIIIII
17 379 A G < + 0 0 3 54 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGGG
18 380 A Y S S- 0 0 71 54 88 YYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYYYSPSTRRTRTTTTMTQQQTQ
19 381 A A S S+ 0 0 64 54 24 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAATAAAAAGAADDDAD
20 382 A S S S+ 0 0 96 54 56 SSSSSSSSSSSSSSAAAAAAAAAASAAAAAAAAASGASDDADSSSDDADDDAD
21 383 A L S S- 0 0 5 54 26 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLAMFAVVSLAFLLLLL
22 384 A R - 0 0 174 54 67 RRRRRRRRRRRRRRNHHHNKNNNNNKNNNNNNKGGEPHRHHRHHHHYHHHHHH
23 385 A L + 0 0 12 54 72 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLAPPPPPPPPPPPPPPPPP
24 386 A H E -A 43 0A 109 54 68 HHHHHHHHHHHHHHHHQHHQHHHHHHHHHHHHQKHQRIEQQEVVLTQTVVVQI
25 387 A Y E -A 42 0A 32 54 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
26 388 A V E -A 41 0A 52 54 85 VVVVVVVVVVVVVVVVVVVVEVYYEHYYKHYKVKEVIKVKEVEEVKEDNNNEN
27 389 A T E +A 40 0A 59 54 55 TTTTTTTTTTTTTTTTTTTTPPPPTTPPTPPPATCITVTVVTVVVVTVTTTVT
28 390 A V + 0 0 80 54 34 VVVVVVVVVVVVVVVVVVVVVIVVTVIVVVVITVVTKVVIVVIIVHIILLLII
29 391 A K + 0 0 32 54 68 KKKKKKKKKKKKKKKKKKKQKKHHKQHKQHHQKRENQQVEKSTTESQTQQQVQ
30 392 A K - 0 0 163 54 70 KKKKKKKKKKKNKKRRRRRKRTRRKRRKSRKKMHRRTNEETDKKEAQTMMMEM
31 393 A P + 0 0 76 54 53 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPADRGGGGGGGGGGGGGGGGG
32 394 A T S S- 0 0 123 54 64 TTTTTTTTTTTTTTTTTTTTTTTTSTTSITTSSTQSNNDDDDDDNDDDDDDDD
33 395 A A S S+ 0 0 93 54 63 AAAAAAAAAAAASSANNNNKRNNNYNNSgTSSQPtsGGGGGGGGGGGGGGGGG
34 396 A V S S+ 0 0 141 39 90 VVVVVVVVVVVVVVDMMTTNDINNDENSsNTESTqkFV...............
35 397 A D - 0 0 32 54 79 DDDDDDDDDDDDDDEDDDDDDEEESNEDGADDQDPSDQLVSLLLSIVAIIISI
36 398 A P - 0 0 102 54 66 PPPPPPPPPPPPPPPPPPPPPSPPPPPPTPPSPSTPVSEESNSNHHKSHHHEN
37 399 A N S S- 0 0 80 54 75 NNNNNNNNNNNNNNNNNNNNIEYYIVYNTYNNYTKFSLNKNKIIDTVKNNNKH
38 400 A S E - B 0 55A 1 54 86 SSSSSSSSSSSSSSTTTTTCSAAACTAAAAAASVFTFFKKPKPPFDDPKKKQK
39 401 A I E + B 0 54A 44 54 50 IIIIIIIIIIIIIIVIIIVIIIIIIIITIIILVTVVIKFFFFYYVYCFFFFFF
40 402 A V E -AB 27 53A 1 54 17 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVIVVVVVVIKIIIEI
41 403 A E E -AB 26 52A 51 54 66 EEEEEEEEEEEEEEEEEEEEEEEEQQEEEEEEEQEEQQVVIVIIEVVVVVVIV
42 404 A C E -AB 25 51A 1 54 68 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCLCCCESREHHCDHSQQQAQ
43 405 A R E -AB 24 49A 111 53 71 RRRRRRRRRRRRRRRRRRRRRRRRIRRRRRRRRVRRM.CCCCCCRCCCCCCCC
44 406 A V - 0 0 14 54 58 VVVVVVVVVVVVVVVVVVVIIVVVTTVIIVIIIVTVIVRMTRKKMFVVTTTTT
45 407 A G S S+ 0 0 37 54 80 GGGGGGGGGGGGGGGGGGGGDGKKGGKAGKTKGGGAGMMMMMIIGMMMIIIMI
46 408 A D S S- 0 0 152 54 46 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDNGDDDANDEGNGGCCNNKGNNNNN
47 409 A G S S+ 0 0 62 54 29 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKGEDDGDNDDDRGDGGGGG
48 410 A T - 0 0 91 54 70 TTTTTTTTTTTTTTTTTTTTTTLLTTLKTVKTTTDQINEEDEDDVEEEEEEEE
49 411 A V E +B 43 0A 53 54 47 VVVVVVVVVVVVIITVVIVIVVTTVITVVVVVVVVVIVVEVVLLLFVVEEEIE
50 412 A L E S+ 0 0A 15 53 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLT.LLILLLLGLILLLLLL
51 413 A G E +B 42 0A 1 54 8 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGRGGGGGGGG
52 414 A T E +B 41 0A 59 54 81 TTTTTTTTTTTTTTAVVVSKVRTTTVTVRSRVVAKIEEKKVKIIARVTRRRVR
53 415 A G E -B 40 0A 6 54 9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGKGGAGGGGG
54 416 A V E +B 39 0A 46 54 79 VVVVVVVVVVVVVVAEEEEIKVRRKKRVEKVKVTEKEVEVTEVVAIQVTTTRS
55 417 A G E -B 38 0A 8 54 36 GGGGGGGGGGGGGGGGGGGAGAGGGAGGAGGGGGGGGADEADAAPAAAAAAAA
56 418 A R S S- 0 0 196 54 64 RRRRRRRRRRRRRRRRRRRRRKKKRRKKQKKRRKERSPRKPHPPSVPPNNNPN
57 419 A N S > S- 0 0 90 54 34 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNSSSGGQNSGNNNSS
58 420 A I H > S+ 0 0 83 53 52 IIIIIIIIIIIIIIVIIIIMVTVVAIVIVVIIVIIYLLAINVII.QSLLLLHL
59 421 A K H > S+ 0 0 86 54 2 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKK
60 422 A I H >> S+ 0 0 49 54 75 IIIIIIIIIIIIIIIIIIILIIIIMLIILIIILVIIQDNDDNEEEEDEEEEEE
61 423 A A H 3X S+ 0 0 0 54 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
62 424 A G H 3X S+ 0 0 1 54 8 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGSSGGGGGG
63 425 A I H S+ 0 0 154 54 38 KKKKKKKKKKKKKKKKKKKKKKKKREKKKKKKSKKKRKSKKTRRRTKKNNNKT
74 436 A K H > S+ 0 0 177 54 73 KKKKKKKKKKKKKKPPPPADSEKKEDKEEAEPEEEWEPAESAQQQAEPEEEPE
75 437 A M H > S+ 0 0 81 54 43 MMMMMMMMMMMMMMVAAAVILLLLLVLLMLLLLLLLVMAMLALLLVKMVVVVI
76 438 A L H X S+ 0 0 14 54 19 LLLLLLLLLLLLLLLLLLLVIILLVILIIVIIIVILILLLLLLLLLLLLLLLL
77 439 A D H X S+ 0 0 98 54 34 DDDDDDDDDDDDDDEEEEEEEEDDEEDEEDEEEEEDEEEGEEEEEEEEKKKTK
78 440 A F H < S+ 0 0 149 53 76 FFFFFFFFFFFFFFKKKKKKKKHHEKYKFKKKKKK KKRKKKKKKKKKKKKKK
79 441 A Y H >X S+ 0 0 46 52 2 YYYY YYYYYYYFFYYYYYYYYYYYYYYYYYYYYY YYYYYYWWYYYYYYYYY
80 442 A A H 3X S+ 0 0 23 52 77 AAAA AAAAAAAAAAAAASASAAAAAAVAAVASAS IGVFSVNNYVFIFFFGF
81 443 A K H 3< S+ 0 0 145 52 85 KKKK KKKKKKKKKSRRRRNQKAAKKAAQASNQNL KRILQITTKILQVVVRV
82 444 A Q H <> S+ 0 0 101 52 83 QQQQ QQQQQQQQQLLLLMILIEERLEIKELLLLI LREEVEIIIEQLAAALA
83 445 A R H X S+ 0 0 41 52 0 RRRR RRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRR
84 446 A A H X S+ 0 0 43 46 39 AAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA E QQ QAA QQQSQ
85 447 A A H 4 S+ 0 0 69 41 44 AAAA AAAAAAAAAAAAASSSSAAASASAASAAAN A S ANN N
86 448 A A H < S+ 0 0 73 6 27 T T TT T
87 449 A L H < 0 0 120 1 0
88 450 A G < 0 0 97 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 363 A 25 25 25 25 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 1.386 46 0.58
2 364 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 6 0 33 8 50 48 0 0 1.174 39 0.63
3 365 A 0 0 0 0 0 0 0 0 0 14 4 2 0 0 0 31 0 29 18 2 49 0 0 1.599 53 0.28
4 366 A 30 45 19 0 2 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 53 0 0 1.260 42 0.63
5 367 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 24 74 54 0 0 0.639 21 0.72
6 368 A 15 13 4 31 2 0 0 0 2 2 0 0 0 0 13 15 0 0 4 0 54 0 0 1.925 64 0.19
7 369 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 69 19 54 0 0 0.836 27 0.65
8 370 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
9 371 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 54 0 0 0.000 0 1.00
10 372 A 0 0 0 2 0 0 0 0 6 0 17 11 0 0 48 17 0 0 0 0 54 0 0 1.428 47 0.26
11 373 A 0 2 0 0 0 0 0 0 0 0 0 13 0 0 2 11 43 30 0 0 54 0 0 1.381 46 0.39
12 374 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
13 375 A 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 2 0 0 54 0 0 0.092 3 0.93
14 376 A 0 0 0 0 0 0 0 6 7 0 85 0 0 0 0 2 0 0 0 0 54 0 0 0.564 18 0.76
15 377 A 0 93 4 2 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 54 0 0 0.341 11 0.91
16 378 A 6 2 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.306 10 0.94
17 379 A 0 0 0 0 0 0 0 98 2 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.092 3 0.97
18 380 A 0 0 0 2 2 0 63 0 0 2 4 15 0 0 6 0 7 0 0 0 54 0 0 1.271 42 0.11
19 381 A 2 0 0 0 0 0 0 2 87 0 0 2 0 0 0 0 0 0 0 7 54 0 0 0.535 17 0.76
20 382 A 0 0 0 0 0 0 0 2 43 0 39 0 0 0 0 0 0 0 0 17 54 0 0 1.103 36 0.43
21 383 A 4 83 0 2 4 0 0 0 6 0 2 0 0 0 0 0 0 0 0 0 54 0 0 0.704 23 0.74
22 384 A 0 0 0 0 0 0 2 4 0 2 0 0 0 30 31 6 0 2 24 0 54 0 0 1.571 52 0.33
23 385 A 0 67 0 0 0 0 0 0 2 31 0 0 0 0 0 0 0 0 0 0 54 0 0 0.708 23 0.28
24 386 A 9 2 4 0 0 0 0 0 0 0 0 4 0 59 2 2 15 4 0 0 54 0 0 1.401 46 0.32
25 387 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
26 388 A 50 0 2 0 0 0 9 0 0 0 0 0 0 4 0 11 0 15 7 2 54 0 0 1.557 51 0.15
27 389 A 17 0 2 0 0 0 0 0 2 17 0 61 2 0 0 0 0 0 0 0 54 0 0 1.120 37 0.44
28 390 A 67 6 19 0 0 0 0 0 0 0 0 6 0 2 0 2 0 0 0 0 54 0 0 1.051 35 0.66
29 391 A 4 0 0 0 0 0 0 0 0 0 4 6 0 9 2 48 20 6 2 0 54 0 0 1.609 53 0.31
30 392 A 0 0 0 9 0 0 0 0 2 0 2 7 0 2 24 39 2 7 4 2 54 0 0 1.807 60 0.30
31 393 A 0 0 0 0 0 0 0 31 4 61 0 0 0 0 2 0 0 0 0 2 54 0 0 0.935 31 0.46
32 394 A 0 0 2 0 0 0 0 0 0 0 9 56 0 0 0 0 2 0 6 26 54 0 0 1.205 40 0.35
33 395 A 0 0 0 0 0 0 2 33 26 2 11 4 0 0 2 2 2 0 17 0 54 15 3 1.750 58 0.37
34 396 A 41 0 3 5 3 0 0 0 0 0 8 10 0 0 0 3 3 5 13 8 39 0 0 1.937 64 0.09
35 397 A 4 7 9 0 0 0 0 2 4 2 9 0 0 0 0 0 4 9 2 48 54 0 0 1.793 59 0.20
36 398 A 2 0 0 0 0 0 0 0 0 59 13 4 0 9 0 2 0 6 6 0 54 0 0 1.386 46 0.34
37 399 A 4 2 7 0 2 0 9 0 0 0 2 6 0 2 0 9 0 2 54 2 54 0 0 1.693 56 0.24
38 400 A 2 0 0 0 7 0 0 0 17 7 31 13 4 0 0 13 2 0 0 4 54 0 0 1.970 65 0.13
39 401 A 11 2 56 0 19 0 6 0 0 0 0 4 2 0 0 2 0 0 0 0 54 0 0 1.387 46 0.50
40 402 A 83 0 13 0 0 0 0 0 0 0 0 0 0 0 0 2 0 2 0 0 54 0 0 0.565 18 0.82
41 403 A 19 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 9 65 0 0 54 0 0 1.006 33 0.34
42 404 A 0 2 0 0 0 0 0 0 2 0 4 0 72 6 2 0 7 4 0 2 54 1 0 1.128 37 0.32
43 405 A 2 0 2 2 0 0 0 0 0 0 0 0 26 0 68 0 0 0 0 0 53 0 0 0.839 28 0.28
44 406 A 56 0 15 4 2 0 0 0 0 0 0 17 0 0 4 4 0 0 0 0 54 0 0 1.348 45 0.42
45 407 A 0 0 11 17 0 0 0 56 4 0 0 2 0 0 0 9 0 0 0 2 54 0 0 1.359 45 0.19
46 408 A 0 0 0 0 0 0 0 9 2 0 0 0 4 0 0 2 0 2 19 63 54 0 0 1.168 38 0.53
47 409 A 0 0 0 0 0 0 0 80 0 0 0 0 0 0 2 2 0 2 2 13 54 0 0 0.742 24 0.70
48 410 A 4 6 2 0 0 0 0 0 0 0 0 54 0 0 0 4 2 20 2 7 54 0 0 1.477 49 0.29
49 411 A 63 6 13 0 2 0 0 0 0 0 0 7 0 0 0 0 0 9 0 0 54 1 0 1.204 40 0.52
50 412 A 0 92 4 0 0 0 0 2 0 0 0 2 0 0 0 0 0 0 0 0 53 0 0 0.346 11 0.84
51 413 A 0 0 0 0 0 0 0 96 2 0 0 0 0 0 2 0 0 0 0 0 54 0 0 0.184 6 0.92
52 414 A 20 0 6 0 0 0 0 0 6 0 4 37 0 0 15 9 0 4 0 0 54 0 0 1.760 58 0.18
53 415 A 0 0 0 0 0 0 0 94 4 0 0 0 0 0 0 2 0 0 0 0 54 0 0 0.250 8 0.90
54 416 A 44 0 4 0 0 0 0 0 4 0 2 9 0 0 7 11 2 17 0 0 54 0 0 1.708 57 0.20
55 417 A 0 0 0 0 0 0 0 63 30 2 0 0 0 0 0 0 0 2 0 4 54 0 0 0.922 30 0.63
56 418 A 2 0 0 0 0 0 0 0 0 13 4 0 0 2 52 17 2 2 7 0 54 0 0 1.514 50 0.36
57 419 A 0 0 0 0 0 0 0 7 0 0 11 0 0 0 0 0 2 0 80 0 54 1 0 0.692 23 0.65
58 420 A 17 13 53 2 0 0 2 0 4 0 2 2 0 2 0 0 2 0 2 0 53 0 0 1.554 51 0.47
59 421 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 0 0 54 0 0 0.092 3 0.98
60 422 A 2 7 57 2 0 0 0 0 0 0 0 0 0 0 0 0 2 19 4 7 54 0 0 1.360 45 0.24
61 423 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
62 424 A 0 0 0 0 0 0 0 94 0 0 4 0 0 0 0 0 0 2 0 0 54 0 0 0.250 8 0.91
63 425 A 2 41 35 13 0 0 0 0 4 0 0 4 0 0 0 0 2 0 0 0 54 0 0 1.390 46 0.56
64 426 A 0 0 2 0 0 0 0 0 0 0 0 0 2 0 76 19 0 0 2 0 54 0 0 0.743 24 0.73
65 427 A 0 0 0 0 0 0 0 0 98 0 2 0 0 0 0 0 0 0 0 0 54 0 0 0.092 3 0.97
66 428 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
67 429 A 0 0 0 33 0 0 0 2 0 0 0 0 0 0 0 0 22 43 0 0 54 0 0 1.138 37 0.26
68 430 A 4 0 0 0 0 0 0 0 11 0 6 0 0 2 0 2 4 9 50 13 54 0 0 1.628 54 0.41
69 431 A 33 0 2 0 0 0 0 7 57 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.951 31 0.50
70 432 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
71 433 A 0 0 0 0 0 0 0 2 7 0 7 2 0 0 33 26 6 2 9 6 54 0 0 1.865 62 0.31
72 434 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 0 57 33 54 0 0 0.905 30 0.63
73 435 A 0 0 0 0 0 0 0 0 0 0 4 6 0 0 9 74 0 2 6 0 54 0 0 0.960 32 0.62
74 436 A 0 0 0 0 0 2 0 0 9 15 4 0 0 0 0 33 6 28 0 4 54 0 0 1.704 56 0.27
75 437 A 17 33 4 35 0 0 0 0 9 0 0 0 0 0 0 2 0 0 0 0 54 0 0 1.449 48 0.57
76 438 A 7 74 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.727 24 0.80
77 439 A 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 7 0 52 0 37 54 0 0 1.049 35 0.66
78 440 A 0 0 0 0 30 0 2 0 0 0 0 0 0 4 2 60 0 2 0 0 53 0 0 1.015 33 0.24
79 441 A 0 0 0 0 4 4 92 0 0 0 0 0 0 0 0 0 0 0 0 0 52 0 0 0.325 10 0.97
80 442 A 10 0 4 0 12 0 2 4 56 0 10 0 0 0 0 0 0 0 4 0 52 0 0 1.477 49 0.23
81 443 A 8 6 6 0 0 0 0 0 10 0 4 4 0 0 12 37 10 0 6 0 52 0 0 2.009 67 0.15
82 444 A 2 25 13 2 0 0 0 0 8 0 0 0 0 0 4 2 29 15 0 0 52 0 0 1.814 60 0.17
83 445 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 52 0 0 0.000 0 1.00
84 446 A 0 0 0 0 0 0 0 0 80 0 2 0 0 0 0 0 15 2 0 0 46 0 0 0.628 20 0.60
85 447 A 0 0 0 0 0 0 0 0 71 0 20 0 0 0 0 0 0 0 10 0 41 0 0 0.791 26 0.55
86 448 A 0 0 0 0 0 0 0 0 17 0 0 83 0 0 0 0 0 0 0 0 6 0 0 0.451 15 0.72
87 449 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
88 450 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
29 30 540 2 gKPs
35 33 453 1 tVq
36 33 615 1 sKk
//