Complet list of 1s4g hssp file
Complete list of 1s4g.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1S4G
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-09
HEADER CELL ADHESION 16-JAN-04 1S4G
COMPND MOL_ID: 1; MOLECULE: VITRONECTIN; CHAIN: A; FRAGMENT: SOMATOMEDIN B
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR A.MAYASUNDARI,N.A.WHITTEMORE,E.H.SERPERSU,C.B.PETERSON
DBREF 1S4G A 1 51 UNP P04004 VTNC_HUMAN 20 70
SEQLENGTH 51
NCHAIN 1 chain(s) in 1S4G data set
NALIGN 164
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : D9ZGG2_HUMAN 1.00 1.00 1 51 20 70 51 0 0 478 D9ZGG2 Vitronectin OS=Homo sapiens GN=VTN PE=2 SV=1
2 : F5GX75_HUMAN 1.00 1.00 1 51 20 70 51 0 0 118 F5GX75 Vitronectin (Fragment) OS=Homo sapiens GN=VTN PE=2 SV=2
3 : VTNC_HUMAN 3BT2 1.00 1.00 1 51 20 70 51 0 0 478 P04004 Vitronectin OS=Homo sapiens GN=VTN PE=1 SV=1
4 : F6SSW9_MACMU 0.98 0.98 1 51 20 70 51 0 0 479 F6SSW9 Uncharacterized protein OS=Macaca mulatta GN=VTN PE=4 SV=1
5 : G3R679_GORGO 0.98 0.98 1 51 20 70 51 0 0 478 G3R679 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101154561 PE=4 SV=1
6 : G7NGJ1_MACMU 0.98 0.98 1 51 20 70 51 0 0 489 G7NGJ1 Serum-spreading factor OS=Macaca mulatta GN=EGK_08321 PE=4 SV=1
7 : G7PTW8_MACFA 0.98 0.98 1 51 20 70 51 0 0 489 G7PTW8 Serum-spreading factor OS=Macaca fascicularis GN=EGM_07543 PE=4 SV=1
8 : H2NT31_PONAB 0.98 0.98 1 51 20 70 51 0 0 414 H2NT31 Uncharacterized protein OS=Pongo abelii GN=VTN PE=4 SV=2
9 : H2QCH3_PANTR 0.98 0.98 1 51 20 70 51 0 0 478 H2QCH3 Uncharacterized protein OS=Pan troglodytes GN=VTN PE=2 SV=1
10 : Q5NVS5_PONAB 0.98 0.98 1 51 20 70 51 0 0 478 Q5NVS5 Putative uncharacterized protein DKFZp470F0511 OS=Pongo abelii GN=DKFZp470F0511 PE=2 SV=1
11 : G1QNN4_NOMLE 0.94 0.96 1 51 20 70 51 0 0 458 G1QNN4 Uncharacterized protein OS=Nomascus leucogenys GN=VTN PE=4 SV=1
12 : G3TMX5_LOXAF 0.94 0.96 1 51 20 70 51 0 0 424 G3TMX5 Uncharacterized protein OS=Loxodonta africana GN=VTN PE=4 SV=1
13 : G5BVN8_HETGA 0.92 0.96 1 50 20 69 50 0 0 588 G5BVN8 Vitronectin OS=Heterocephalus glaber GN=GW7_08170 PE=4 SV=1
14 : F6V881_HORSE 0.90 0.96 1 51 20 70 51 0 0 478 F6V881 Uncharacterized protein OS=Equus caballus GN=VTN PE=4 SV=1
15 : G9KXI3_MUSPF 0.90 0.94 1 51 20 70 51 0 0 469 G9KXI3 Vitronectin (Fragment) OS=Mustela putorius furo PE=2 SV=1
16 : I3MSG3_SPETR 0.90 0.92 1 51 20 70 51 0 0 468 I3MSG3 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=VTN PE=4 SV=1
17 : M3YS87_MUSPF 0.90 0.94 1 51 20 70 51 0 0 470 M3YS87 Uncharacterized protein OS=Mustela putorius furo GN=VTN PE=4 SV=1
18 : T0NLF0_9CETA 0.90 0.96 1 50 41 90 50 0 0 490 T0NLF0 Vitronectin OS=Camelus ferus GN=CB1_000765074 PE=4 SV=1
19 : A7YB29_PIG 0.88 0.94 1 49 20 68 49 0 0 245 A7YB29 Vitronectin (Fragment) OS=Sus scrofa PE=2 SV=1
20 : D2GU38_AILME 0.88 0.92 1 51 20 70 51 0 0 469 D2GU38 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_000124 PE=4 SV=1
21 : F1PUM6_CANFA 0.88 0.94 1 51 20 70 51 0 0 470 F1PUM6 Uncharacterized protein OS=Canis familiaris GN=VTN PE=4 SV=1
22 : G1LEL6_AILME 0.88 0.92 1 51 20 70 51 0 0 470 G1LEL6 Uncharacterized protein OS=Ailuropoda melanoleuca GN=VTN PE=4 SV=1
23 : G1PKA4_MYOLU 0.88 0.94 1 51 20 70 51 0 0 475 G1PKA4 Uncharacterized protein OS=Myotis lucifugus GN=VTN PE=4 SV=1
24 : G1U415_RABIT 0.88 0.98 1 51 20 70 51 0 0 475 G1U415 Vitronectin OS=Oryctolagus cuniculus GN=VTN PE=4 SV=1
25 : L5LN49_MYODS 0.88 0.94 1 51 20 70 51 0 0 475 L5LN49 Vitronectin OS=Myotis davidii GN=MDA_GLEAN10016809 PE=4 SV=1
26 : L8Y6P1_TUPCH 0.88 0.98 1 51 20 70 51 0 0 480 L8Y6P1 Vitronectin OS=Tupaia chinensis GN=TREES_T100003583 PE=4 SV=1
27 : M3W9I5_FELCA 0.88 0.94 1 51 20 70 51 0 0 468 M3W9I5 Uncharacterized protein OS=Felis catus GN=VTN PE=4 SV=1
28 : P79272_PIG 0.88 0.94 1 49 20 68 49 0 0 388 P79272 Vitronectin (Precursor) OS=Sus scrofa PE=2 SV=1
29 : S7NBE9_MYOBR 0.88 0.94 1 51 20 70 51 0 0 500 S7NBE9 Vitronectin OS=Myotis brandtii GN=D623_10015987 PE=4 SV=1
30 : U6DDQ3_NEOVI 0.88 0.94 1 51 20 70 51 0 0 417 U6DDQ3 Vitronectin (Fragment) OS=Neovison vison GN=VTNC PE=2 SV=1
31 : VTNC_PIG 0.88 0.94 1 49 20 68 49 0 0 459 P48819 Vitronectin OS=Sus scrofa GN=VTN PE=1 SV=1
32 : VTNC_RABIT 0.88 0.98 1 51 20 70 51 0 0 475 P22458 Vitronectin OS=Oryctolagus cuniculus GN=VTN PE=1 SV=1
33 : F7HUN3_CALJA 0.86 0.90 1 51 20 70 51 0 0 458 F7HUN3 Uncharacterized protein OS=Callithrix jacchus GN=VTN PE=4 SV=1
34 : H0V077_CAVPO 0.86 0.96 1 50 20 69 50 0 0 471 H0V077 Uncharacterized protein OS=Cavia porcellus GN=VTN PE=4 SV=1
35 : H0WMK9_OTOGA 0.86 0.94 1 51 20 70 51 0 0 470 H0WMK9 Uncharacterized protein OS=Otolemur garnettii GN=VTN PE=4 SV=1
36 : I3L998_PIG 0.86 0.94 1 49 20 68 49 0 0 387 I3L998 Vitronectin OS=Sus scrofa GN=VTN PE=4 SV=1
37 : I3LP50_PIG 0.86 0.94 1 49 20 68 49 0 0 459 I3LP50 Vitronectin OS=Sus scrofa GN=VTN PE=4 SV=1
38 : L5JR47_PTEAL 0.86 0.94 1 51 20 70 51 0 0 462 L5JR47 Vitronectin OS=Pteropus alecto GN=PAL_GLEAN10019926 PE=4 SV=1
39 : G3GTP7_CRIGR 0.84 0.92 1 51 20 70 51 0 0 876 G3GTP7 Vitronectin OS=Cricetulus griseus GN=I79_001034 PE=3 SV=1
40 : G3IP93_CRIGR 0.84 0.92 1 51 20 70 51 0 0 230 G3IP93 Vitronectin OS=Cricetulus griseus GN=I79_025798 PE=4 SV=1
41 : I3L638_PIG 0.84 0.94 1 49 20 68 49 0 0 458 I3L638 Vitronectin OS=Sus scrofa GN=VTN PE=4 SV=1
42 : I3L9F8_PIG 0.84 0.94 1 49 20 68 49 0 0 386 I3L9F8 Vitronectin OS=Sus scrofa GN=VTN PE=4 SV=1
43 : L8HY22_9CETA 0.84 0.92 1 51 20 70 51 0 0 476 L8HY22 Vitronectin OS=Bos mutus GN=M91_20434 PE=4 SV=1
44 : Q3LRQ1_CAPHI 0.84 0.92 1 51 1 51 51 0 0 444 Q3LRQ1 Vitronectin (Fragment) OS=Capra hircus PE=2 SV=1
45 : Q3ZBS7_BOVIN 0.84 0.92 1 51 20 70 51 0 0 476 Q3ZBS7 Uncharacterized protein OS=Bos taurus GN=VTN PE=2 SV=1
46 : Q3KR94_RAT 0.82 0.88 1 51 20 70 51 0 0 478 Q3KR94 Protein Vtn OS=Rattus norvegicus GN=Vtn PE=2 SV=1
47 : Q62905_RAT 0.82 0.88 1 51 20 70 51 0 0 478 Q62905 Vitronectin OS=Rattus norvegicus PE=2 SV=1
48 : Q7TQ11_RAT 0.82 0.88 1 51 20 70 51 0 0 490 Q7TQ11 Aa1018 OS=Rattus norvegicus GN=Vtn PE=2 SV=1
49 : VTNC_MOUSE 0.82 0.90 1 51 20 70 51 0 0 478 P29788 Vitronectin OS=Mus musculus GN=Vtn PE=1 SV=2
50 : G3WHI7_SARHA 0.80 0.86 1 51 25 75 51 0 0 474 G3WHI7 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=VTN PE=4 SV=1
51 : F6QTH2_MONDO 0.76 0.88 1 51 21 71 51 0 0 464 F6QTH2 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=VTN PE=4 SV=1
52 : F7GA06_ORNAN 0.76 0.88 1 51 23 73 51 0 0 301 F7GA06 Uncharacterized protein OS=Ornithorhynchus anatinus GN=VTN PE=4 SV=1
53 : W5Q9D5_SHEEP 0.76 0.86 1 51 20 70 51 0 0 475 W5Q9D5 Uncharacterized protein OS=Ovis aries GN=VTN PE=4 SV=1
54 : E1C7A7_CHICK 0.68 0.88 2 51 20 69 50 0 0 453 E1C7A7 Uncharacterized protein OS=Gallus gallus GN=VTN PE=4 SV=2
55 : G1N1Y6_MELGA 0.68 0.90 2 51 20 69 50 0 0 452 G1N1Y6 Uncharacterized protein OS=Meleagris gallopavo GN=VTN PE=4 SV=2
56 : O12945_CHICK 0.68 0.88 2 51 20 69 50 0 0 453 O12945 Vitronectin OS=Gallus gallus PE=2 SV=1
57 : U3J2R0_ANAPL 0.67 0.82 1 51 20 70 51 0 0 447 U3J2R0 Uncharacterized protein OS=Anas platyrhynchos GN=VTN PE=4 SV=1
58 : Q90351_COTCO 0.66 0.88 2 51 20 69 50 0 0 359 Q90351 Nectinepsin OS=Coturnix coturnix PE=2 SV=1
59 : H3ABB6_LATCH 0.65 0.79 4 51 19 66 48 0 0 460 H3ABB6 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
60 : H0Z6B5_TAEGU 0.64 0.86 2 51 20 69 50 0 0 434 H0Z6B5 Uncharacterized protein OS=Taeniopygia guttata GN=VTN PE=4 SV=1
61 : H9GID1_ANOCA 0.64 0.81 3 49 23 69 47 0 0 449 H9GID1 Uncharacterized protein (Fragment) OS=Anolis carolinensis GN=VTN PE=4 SV=1
62 : U3JVG5_FICAL 0.64 0.88 2 51 20 69 50 0 0 433 U3JVG5 Uncharacterized protein OS=Ficedula albicollis GN=VTN PE=4 SV=1
63 : A4IHE8_XENTR 0.62 0.76 2 51 23 72 50 0 0 447 A4IHE8 Vtn protein (Fragment) OS=Xenopus tropicalis GN=vtn PE=2 SV=1
64 : A9ULL5_XENTR 0.62 0.76 2 51 29 78 50 0 0 453 A9ULL5 Vtn protein (Fragment) OS=Xenopus tropicalis GN=vtn PE=2 SV=1
65 : F7CQ66_XENTR 0.62 0.76 2 51 29 78 50 0 0 453 F7CQ66 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=vtn PE=4 SV=1
66 : H2UV95_TAKRU 0.62 0.82 1 39 18 56 39 0 0 520 H2UV95 Uncharacterized protein OS=Takifugu rubripes GN=LOC101063214 PE=4 SV=1
67 : H2UV96_TAKRU 0.62 0.82 1 39 18 56 39 0 0 448 H2UV96 Uncharacterized protein OS=Takifugu rubripes GN=LOC101063214 PE=4 SV=1
68 : K7GIQ2_PELSI 0.62 0.86 2 51 20 69 50 0 0 455 K7GIQ2 Uncharacterized protein OS=Pelodiscus sinensis GN=VTN PE=4 SV=1
69 : Q5HZC4_XENTR 0.62 0.76 2 51 27 76 50 0 0 451 Q5HZC4 Vtn-prov protein (Fragment) OS=Xenopus tropicalis GN=vtn-prov PE=2 SV=1
70 : M3XGU0_LATCH 0.61 0.80 1 51 18 68 51 0 0 492 M3XGU0 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
71 : K4FT09_CALMI 0.60 0.80 1 40 20 59 40 0 0 413 K4FT09 Vitronectin OS=Callorhynchus milii PE=2 SV=1
72 : M7BQ53_CHEMY 0.60 0.82 2 51 20 69 50 0 0 426 M7BQ53 Vitronectin OS=Chelonia mydas GN=UY3_05099 PE=4 SV=1
73 : V9KX97_CALMI 0.60 0.80 1 40 20 59 40 0 0 416 V9KX97 Vitronectin OS=Callorhynchus milii PE=2 SV=1
74 : W5MDU0_LEPOC 0.60 0.76 2 51 19 68 50 0 0 485 W5MDU0 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
75 : W5US52_ICTPU 0.59 0.77 1 39 19 57 39 0 0 492 W5US52 Vitronectin OS=Ictalurus punctatus GN=VTN PE=2 SV=1
76 : C5H606_XENLA 0.56 0.74 2 51 23 72 50 0 0 444 C5H606 Vitronectin OS=Xenopus laevis GN=vtn PE=2 SV=1
77 : H2LVM0_ORYLA 0.56 0.79 1 39 20 58 39 0 0 510 H2LVM0 Uncharacterized protein OS=Oryzias latipes GN=LOC101170202 PE=4 SV=1
78 : G3P167_GASAC 0.54 0.69 1 39 18 56 39 0 0 519 G3P167 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
79 : H2U3R1_TAKRU 0.54 0.72 1 39 15 52 39 1 1 461 H2U3R1 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101063812 PE=4 SV=1
80 : H3CJ30_TETNG 0.54 0.82 1 39 21 59 39 0 0 479 H3CJ30 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
81 : I3JN45_ORENI 0.52 0.77 1 40 18 57 40 0 0 522 I3JN45 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100693578 PE=4 SV=1
82 : W5LM04_ASTMX 0.52 0.73 1 40 18 57 40 0 0 575 W5LM04 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
83 : W5LM09_ASTMX 0.52 0.73 1 40 18 57 40 0 0 474 W5LM09 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
84 : F1R4H1_DANRE 0.51 0.72 1 43 17 59 43 0 0 514 F1R4H1 Uncharacterized protein OS=Danio rerio GN=vtna PE=4 SV=1
85 : I3KIE1_ORENI 0.51 0.73 3 43 19 59 41 0 0 285 I3KIE1 Uncharacterized protein (Fragment) OS=Oreochromis niloticus PE=4 SV=1
86 : Q502F1_DANRE 0.51 0.72 1 43 17 59 43 0 0 514 Q502F1 Vitronectin a OS=Danio rerio GN=vtna PE=2 SV=1
87 : W5LQX4_ASTMX 0.51 0.76 1 51 18 68 51 0 0 461 W5LQX4 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
88 : W5LQX5_ASTMX 0.51 0.76 1 51 27 77 51 0 0 463 W5LQX5 Uncharacterized protein (Fragment) OS=Astyanax mexicanus PE=4 SV=1
89 : G3P178_GASAC 0.50 0.61 3 46 23 66 44 0 0 493 G3P178 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus PE=4 SV=1
90 : A7E2Q3_DANRE 0.49 0.73 1 51 34 84 51 0 0 469 A7E2Q3 Vtnb protein (Fragment) OS=Danio rerio GN=vtnb PE=2 SV=1
91 : F1Q5D8_DANRE 0.49 0.73 1 51 17 67 51 0 0 449 F1Q5D8 Uncharacterized protein OS=Danio rerio GN=vtnb PE=4 SV=1
92 : F1QAB4_DANRE 0.49 0.67 1 39 60 98 39 0 0 740 F1QAB4 Uncharacterized protein OS=Danio rerio GN=prg4b PE=4 SV=1
93 : F1QI63_DANRE 0.49 0.73 1 51 34 84 51 0 0 469 F1QI63 Uncharacterized protein (Fragment) OS=Danio rerio GN=vtnb PE=4 SV=1
94 : Q7SXJ7_DANRE 0.49 0.73 1 51 31 81 51 0 0 463 Q7SXJ7 Vtnb protein (Fragment) OS=Danio rerio GN=vtnb PE=2 SV=1
95 : R0JBK9_ANAPL 0.49 0.66 4 44 44 84 41 0 0 1306 R0JBK9 Proteoglycan-4 (Fragment) OS=Anas platyrhynchos GN=Anapl_16296 PE=4 SV=1
96 : U3IYV7_ANAPL 0.49 0.66 4 44 68 108 41 0 0 1408 U3IYV7 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=PRG4 PE=4 SV=1
97 : G1PVN1_MYOLU 0.48 0.68 4 43 69 108 40 0 0 963 G1PVN1 Uncharacterized protein OS=Myotis lucifugus GN=PRG4 PE=4 SV=1
98 : H2UDC4_TAKRU 0.48 0.73 1 40 66 105 40 0 0 395 H2UDC4 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101064652 PE=4 SV=1
99 : E2RC11_CANFA 0.47 0.53 3 47 22 66 45 0 0 411 E2RC11 Uncharacterized protein OS=Canis familiaris GN=ENDOU PE=4 SV=2
100 : H3B059_LATCH 0.47 0.67 3 47 71 114 45 1 1 395 H3B059 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
101 : W4YS72_STRPU 0.47 0.74 4 46 179 221 43 0 0 528 W4YS72 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-SommL_2 PE=4 SV=1
102 : W5M012_LEPOC 0.47 0.62 3 47 65 109 45 0 0 507 W5M012 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
103 : B8JMI4_DANRE 0.46 0.72 3 41 65 103 39 0 0 129 B8JMI4 Uncharacterized protein OS=Danio rerio GN=prg4a PE=4 SV=1
104 : B8JMI5_DANRE 0.46 0.72 3 41 65 103 39 0 0 486 B8JMI5 Uncharacterized protein OS=Danio rerio GN=prg4a PE=4 SV=1
105 : C3YQX7_BRAFL 0.46 0.59 1 39 134 174 41 1 2 869 C3YQX7 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_81347 PE=4 SV=1
106 : E0CY90_MOUSE 0.46 0.67 1 39 25 63 39 0 0 99 E0CY90 Proteoglycan 4 (Fragment) OS=Mus musculus GN=Prg4 PE=2 SV=1
107 : F6T3B2_MACMU 0.46 0.69 1 39 25 63 39 0 0 275 F6T3B2 Uncharacterized protein OS=Macaca mulatta GN=LOC716849 PE=4 SV=1
108 : F6VTD3_HORSE 0.46 0.67 2 40 67 105 39 0 0 190 F6VTD3 Uncharacterized protein OS=Equus caballus GN=PRG4 PE=4 SV=1
109 : F6X999_MONDO 0.46 0.61 4 44 27 67 41 0 0 1297 F6X999 Uncharacterized protein OS=Monodelphis domestica GN=PRG4 PE=4 SV=2
110 : G3WRA3_SARHA 0.46 0.59 4 44 27 67 41 0 0 1050 G3WRA3 Uncharacterized protein OS=Sarcophilus harrisii GN=PRG4 PE=4 SV=1
111 : G7NXF3_MACFA 0.46 0.69 1 39 25 63 39 0 0 275 G7NXF3 Putative uncharacterized protein (Fragment) OS=Macaca fascicularis GN=EGM_01587 PE=4 SV=1
112 : Q4RXX6_TETNG 0.46 0.72 1 39 62 100 39 0 0 380 Q4RXX6 Chromosome 11 SCAF14979, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00027244001 PE=4 SV=1
113 : Q7ZW66_DANRE 0.46 0.72 3 41 65 103 39 0 0 486 Q7ZW66 Zgc:56698 OS=Danio rerio GN=prg4a PE=2 SV=1
114 : E0CXA1_MOUSE 0.45 0.65 1 40 25 64 40 0 0 179 E0CXA1 Proteoglycan 4 (Fragment) OS=Mus musculus GN=Prg4 PE=2 SV=1
115 : E9QQ17_MOUSE 0.45 0.65 1 40 25 64 40 0 0 1012 E9QQ17 Proteoglycan 4 OS=Mus musculus GN=Prg4 PE=2 SV=1
116 : ENDOU_PAROL 0.45 0.70 1 47 62 108 47 0 0 385 Q9PTU6 Poly(U)-specific endoribonuclease OS=Paralichthys olivaceus GN=endou PE=2 SV=1
117 : G3P5B7_GASAC 0.45 0.60 1 39 49 88 40 1 1 850 G3P5B7 Uncharacterized protein OS=Gasterosteus aculeatus GN=ENPP2 (2 of 2) PE=4 SV=1
118 : G3T0H0_LOXAF 0.45 0.57 3 42 22 61 40 0 0 412 G3T0H0 Uncharacterized protein OS=Loxodonta africana GN=ENDOU PE=4 SV=1
119 : H2TQW9_TAKRU 0.45 0.60 1 39 4 43 40 1 1 805 H2TQW9 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=ENPP2 (1 of 2) PE=4 SV=1
120 : H9G5L5_ANOCA 0.45 0.59 1 44 25 68 44 0 0 1410 H9G5L5 Uncharacterized protein OS=Anolis carolinensis GN=PRG4 PE=4 SV=2
121 : I3JUS2_ORENI 0.45 0.69 1 42 61 102 42 0 0 612 I3JUS2 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100694857 PE=4 SV=1
122 : K1RQN4_CRAGI 0.45 0.59 3 46 18 61 44 0 0 365 K1RQN4 Placental protein 11 OS=Crassostrea gigas GN=CGI_10007653 PE=4 SV=1
123 : K7G3G8_PELSI 0.45 0.60 1 40 65 104 40 0 0 1371 K7G3G8 Uncharacterized protein OS=Pelodiscus sinensis GN=PRG4 PE=4 SV=1
124 : G3PPT1_GASAC 0.44 0.67 1 39 41 79 39 0 0 448 G3PPT1 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus PE=4 SV=1
125 : H2LZW5_ORYLA 0.44 0.67 1 43 62 104 43 0 0 473 H2LZW5 Uncharacterized protein OS=Oryzias latipes GN=LOC101171901 PE=4 SV=1
126 : L8Y364_TUPCH 0.44 0.53 3 47 2 46 45 0 0 390 L8Y364 Poly(U)-specific endoribonuclease OS=Tupaia chinensis GN=TREES_T100021303 PE=4 SV=1
127 : M3ZJW3_XIPMA 0.44 0.72 1 43 61 103 43 0 0 485 M3ZJW3 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
128 : M4AVK9_XIPMA 0.44 0.78 4 44 62 102 41 0 0 258 M4AVK9 Uncharacterized protein OS=Xiphophorus maculatus GN=ENDOU (2 of 2) PE=4 SV=1
129 : R0L2P7_ANAPL 0.44 0.64 3 41 6 44 39 0 0 329 R0L2P7 Placental protein 11 (Fragment) OS=Anas platyrhynchos GN=Anapl_13216 PE=4 SV=1
130 : U3IHU8_ANAPL 0.44 0.64 3 41 6 44 39 0 0 329 U3IHU8 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=ENDOU PE=4 SV=1
131 : W5KD78_ASTMX 0.44 0.74 2 40 64 102 39 0 0 396 W5KD78 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
132 : F2UC78_SALR5 0.43 0.54 2 47 690 735 46 0 0 1720 F2UC78 Putative uncharacterized protein OS=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) GN=PTSG_12412 PE=4 SV=1
133 : G3TUI8_LOXAF 0.43 0.59 1 44 26 69 44 0 0 967 G3TUI8 Uncharacterized protein OS=Loxodonta africana GN=PRG4 PE=4 SV=1
134 : G3UFP8_LOXAF 0.43 0.59 1 44 26 69 44 0 0 423 G3UFP8 Uncharacterized protein OS=Loxodonta africana GN=PRG4 PE=4 SV=1
135 : H0YZI3_TAEGU 0.43 0.66 4 47 44 87 44 0 0 396 H0YZI3 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=PRG4 PE=4 SV=1
136 : H2UDC2_TAKRU 0.43 0.70 1 47 47 93 47 0 0 372 H2UDC2 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101064652 PE=4 SV=1
137 : H2UDC3_TAKRU 0.43 0.72 1 47 62 108 47 0 0 387 H2UDC3 Uncharacterized protein OS=Takifugu rubripes GN=LOC101064652 PE=4 SV=1
138 : I3JUS3_ORENI 0.43 0.68 1 44 62 105 44 0 0 482 I3JUS3 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100694857 PE=4 SV=1
139 : Q4RJ19_TETNG 0.43 0.70 2 41 52 91 40 0 0 382 Q4RJ19 Chromosome 1 SCAF15039, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00033626001 PE=4 SV=1
140 : Q4SZU5_TETNG 0.43 0.60 1 39 49 88 40 1 1 865 Q4SZU5 Chromosome undetermined SCAF11492, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00009670001 PE=4 SV=1
141 : V9K9M5_CALMI 0.43 0.60 1 39 51 90 40 1 1 906 V9K9M5 Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 OS=Callorhynchus milii PE=2 SV=1
142 : V9KI68_CALMI 0.43 0.60 1 39 51 90 40 1 1 726 V9KI68 Ectonucleotide pyrophosphatase/phosphodiesterase family member 2-like protein (Fragment) OS=Callorhynchus milii PE=2 SV=1
143 : V9L0K9_CALMI 0.43 0.66 4 47 25 68 44 0 0 338 V9L0K9 Poly(U)-specific endoribonuclease-like protein OS=Callorhynchus milii PE=2 SV=1
144 : F7HAC3_CALJA 0.42 0.52 3 50 22 69 48 0 0 411 F7HAC3 Uncharacterized protein OS=Callithrix jacchus GN=ENDOU PE=4 SV=1
145 : G3N6I1_GASAC 0.42 0.63 3 45 23 65 43 0 0 388 G3N6I1 Uncharacterized protein OS=Gasterosteus aculeatus GN=ENDOU PE=4 SV=1
146 : H3DAR4_TETNG 0.42 0.65 1 48 62 109 48 0 0 389 H3DAR4 Uncharacterized protein OS=Tetraodon nigroviridis GN=ENDOU PE=4 SV=1
147 : E9FUM9_DAPPU 0.41 0.68 3 43 171 211 41 0 0 211 E9FUM9 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_206492 PE=4 SV=1
148 : E9FUN0_DAPPU 0.41 0.63 4 44 76 116 41 0 0 194 E9FUN0 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_95750 PE=4 SV=1
149 : F1REV8_DANRE 0.41 0.61 2 50 61 109 49 0 0 252 F1REV8 Uncharacterized protein OS=Danio rerio GN=prg4b PE=4 SV=1
150 : F6PRX4_XENTR 0.41 0.63 4 44 88 128 41 0 0 409 F6PRX4 Uncharacterized protein (Fragment) OS=Xenopus tropicalis PE=4 SV=1
151 : H2RZ66_TAKRU 0.41 0.63 2 41 52 92 41 1 1 867 H2RZ66 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101064921 PE=4 SV=1
152 : H2RZ67_TAKRU 0.41 0.63 2 41 51 91 41 1 1 870 H2RZ67 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101064921 PE=4 SV=1
153 : M7BLM7_CHEMY 0.41 0.55 1 49 13 61 49 0 0 1459 M7BLM7 Proteoglycan 4 OS=Chelonia mydas GN=UY3_04110 PE=4 SV=1
154 : Q567C4_DANRE 0.41 0.61 2 50 61 109 49 0 0 252 Q567C4 Prg4 protein (Fragment) OS=Danio rerio GN=prg4b PE=2 SV=1
155 : Q5RI11_DANRE 0.41 0.61 2 50 61 109 49 0 0 249 Q5RI11 Uncharacterized protein OS=Danio rerio GN=prg4b PE=4 SV=2
156 : R4GKH8_CHICK 0.41 0.59 4 44 36 76 41 0 0 569 R4GKH8 Uncharacterized protein OS=Gallus gallus PE=4 SV=1
157 : V4BWR5_LOTGI 0.41 0.59 3 46 53 94 44 1 2 127 V4BWR5 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_175543 PE=4 SV=1
158 : W5KSH8_ASTMX 0.41 0.68 1 44 142 185 44 0 0 778 W5KSH8 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
159 : E2RUH1_CHICK 0.40 0.53 3 47 102 146 45 0 0 372 E2RUH1 Ectonucleotide pyrophosphatase/phosphodiesterase 2, short form OS=Gallus gallus GN=Enpp2 PE=2 SV=1
160 : F1REF9_DANRE 0.40 0.60 1 50 60 109 50 0 0 711 F1REF9 Uncharacterized protein OS=Danio rerio GN=prg4b PE=4 SV=2
161 : G5BWC9_HETGA 0.40 0.58 3 47 22 66 45 0 0 399 G5BWC9 Placental protein 11 OS=Heterocephalus glaber GN=GW7_06997 PE=4 SV=1
162 : H2N0I2_ORYLA 0.40 0.64 1 47 62 108 47 0 0 384 H2N0I2 Uncharacterized protein OS=Oryzias latipes GN=LOC101159794 PE=4 SV=1
163 : H3DL89_TETNG 0.40 0.64 1 45 62 106 45 0 0 501 H3DL89 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
164 : S9XX88_9CETA 0.40 0.53 3 47 94 138 45 0 0 583 S9XX88 Uncharacterized protein OS=Camelus ferus GN=CB1_000902024 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A D 0 0 38 108 56 DDDDDDDDDDDDDDDDDDDDDDDDDEDDDDDDDDDDDEDDDDDDDDDDDDDED E DD G
2 2 A Q + 0 0 127 131 63 QQQQQQQQQQQQQQQQQQQQQQQQQQRQQQQQQQQQQQQQQQQQQQQQQQQAQEEEAE E EEEEEEEEE
3 3 A E S S- 0 0 69 152 50 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEEEEEEEEEEEEEEEEEDDDED DEDEEEEEEED
4 4 A S S S- 0 0 79 165 8 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
5 5 A a S S+ 0 0 64 165 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
6 6 A K > + 0 0 32 165 66 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQQSKEEEEEVEEEAAALLVAV
7 7 A G T 3 S+ 0 0 0 165 18 GGGGGGGGGGGGGGGGGDGGGGDDDGGGDDGDYGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
8 8 A R T 3 S+ 0 0 91 165 4 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRHRR
9 9 A a < - 0 0 11 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A T > + 0 0 58 164 83 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNTTTTTTTTTQLTTDDDDDEEDDFFFEEEFE
11 11 A E T 3 S+ 0 0 157 165 33 EEEEEEEEEEEEEEEEEEDEEEEEEEEDEEDEEEEDDEQQDDEEEQQQQEEEEEEEEEEEKESSSNNDSE
12 12 A G T 3 S+ 0 0 56 165 58 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
13 13 A F S < S- 0 0 40 165 20 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
14 14 A N S S+ 0 0 140 165 61 NNNNNNNNNNNNNNNNNNITNTNNNSNINNINNNNIINVVIINNNMMMMNNNNNNNNNNDDDDDDDDDDN
15 15 A V S S- 0 0 98 165 77 VVVAAAAAAAAAASAAAAAAAAQAPVAAPAAAPAAAAAAAAAAAAAAAASSSAAAASASAASGGGAAAGS
16 16 A D + 0 0 77 164 67 DDDDDDDDDDNDEDDDDDEDDDENEDDEEDENDDDEEDNNEETTTSSSSKKNTMLMLLKGAGNNNQQQNK
17 17 A K - 0 0 84 164 62 KKKKKKKKKKKKKRRKRRRRRRKRKKRRKRRRKRRRRKKKRRRRRKKKKKKKRKKKQKEHRRKKKKKRKE
18 18 A K S S+ 0 0 68 165 69 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
19 19 A b + 0 0 2 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
20 20 A Q S S- 0 0 75 165 47 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
21 21 A c S S+ 0 0 34 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A D > + 0 0 52 165 14 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
23 23 A E T 4 S- 0 0 0 164 82 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDETNTTTTTDTIIISSAIT
24 24 A L T >> S+ 0 0 70 165 80 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMMLLL
25 25 A d T 34 S+ 0 0 4 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
26 26 A S T 3< S+ 0 0 26 165 81 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTTTSSSSNNNVNKVAVVVVKKTVK
27 27 A Y T <4 S+ 0 0 138 165 90 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHHHYYYHY
28 28 A Y S < S- 0 0 103 165 20 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
29 29 A Q S S- 0 0 5 165 74 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQQQQQQQQKQQQQQQQQQQQEEERRQEQ
30 30 A S + 0 0 26 165 59 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
31 31 A b >> + 0 0 0 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A c T 34 S- 0 0 49 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A T T 34 S+ 0 0 152 165 79 TTTTTTTTTTTTSAEVEATEEEYAYSETYETAMSAAAAAAAAAAAVVVAIISASSSSSASESIIISSSIA
34 34 A D T <4 S+ 0 0 33 165 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDDDDDD
35 35 A Y S < S- 0 0 6 165 3 YYYYYYYYYYYYYYYYYYYYYYFYFYYYFYYYYYYYYYYYYYFFFYYYYYYYFYYYYYFYYYYYYYYYYF
36 36 A T - 0 0 94 165 87 TTTTTTTTTTVIMKVMVVVVVVVAVVVVVVVAMIMVVIVVVVMMMMMMMLAIMSSSSSESFSMMMMMVME
37 37 A A S S+ 0 0 47 165 73 AAAAAAAAAAAAAAATAAAAAAAAAAAAAAAATAAAATAAAAAAAEEEEEEAATTTTTTTTTSSSPPSST
38 38 A E S S- 0 0 63 165 86 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQEEEEEQQQQIVTAVVVVVTVTVVVVVVAVT
39 39 A d S S+ 0 0 24 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
40 40 A K S S- 0 0 99 146 68 KKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKKKNKKKKKKKKKKKKKKKKRKWKKKKKNKRKKKK KKN
41 41 A P + 0 0 30 135 71 PPPPPPPPPPPPPPPTPPPPPPPPPPPPPPPPPPHPPPPPPPPPPPPPPPPPPAAATARASAPPP PPR
42 42 A Q + 0 0 69 127 63 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQQQQQQQQQQPKKKKKKKKKKKK KKK
43 43 A V - 0 0 69 125 65 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVEVEEE VEV
44 44 A T + 0 0 40 118 57 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTT TTS
45 45 A R - 0 0 120 105 50 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRR
46 46 A G S S+ 0 0 36 103 32 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GGG
47 47 A D S S- 0 0 69 99 29 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDD
48 48 A V S S+ 0 0 81 85 39 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVVVVVVVVVVVVV MVV
49 49 A F S S- 0 0 92 84 12 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLLFFFFFFFFFFFFFFFFFFFFFFF FFF
50 50 A T 0 0 103 75 61 TTTTTTTTTTTTTTTTTT TATTTTTT TT TVTT TTT HHHTTTTAAAHAAAAATA AEEE AET
51 51 A M 0 0 190 67 20 MMMMMMMMMMML LLML LLLMMMLL ML MM L LMM LLLMMMMLLLLLLLLLLL LIII FIL
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A D 0 0 38 108 56 D D A AAAQSAAA AAA AASAA G DQQ QG QQGS SDT EDT E DD GGT S
2 2 A Q + 0 0 127 131 63 QEQEEEQDEEDKKE EEE EEKEE S VEEE ES EEAA AVK EAQ K RQLL SSKKA
3 3 A E S S- 0 0 69 152 50 GEGEEEEEEEEEEEQEEEEEEDEE TEH DEETLLL LTELLTGEGSNDLQNEN DDGESS TTNNG
4 4 A S S S- 0 0 79 165 8 SSSTSSSSSSSSSSSSTTSTTSTTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
5 5 A a S S+ 0 0 64 165 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
6 6 A K > + 0 0 32 165 66 VVVVIALMVLLMMIQIVVMEEKEEKKKKAKNKRRAKKKAAKKRKKKKAKEKAKRKAKNKKRAAAAKKKKQ
7 7 A G T 3 S+ 0 0 0 165 18 GGGGDGDGGGGEEEGEGGGGGGGGGGGGSGSGGGGGGGGGGGGGGGGSGGGGGGGSGGGGGGGGGGGGGG
8 8 A R T 3 S+ 0 0 91 165 4 RHRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
9 9 A a < - 0 0 11 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A T > + 0 0 58 164 83 AEADDFEE.EEEEEGEKKERRGRRFFSGNDGGGGGFFFGGFGGFFDFNFGGGFGGNGGEEGFGGFGGGGF
11 11 A E T 3 S+ 0 0 157 165 33 DDDGSSNNGNNNNNENDDNSSESSEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEEESEEEEEEEE
12 12 A G T 3 S+ 0 0 56 165 58 GGGGGGGGSGGGGGVGGGGGGPGGAASKKSSTPPGSSSGGSNPSSKLKLGSGTSTHTSPPELGGAKKSGL
13 13 A F S < S- 0 0 40 165 20 FFFFFFFFFYFFFFFFFFFFFFFFFFFYFYYFFFFFFFYYFYFFFYEFEYFLFFFFFYYYFPYYFYYFFE
14 14 A N S S+ 0 0 140 165 61 NNNDDDDDNDDDDDRDDDDDDNDDEEENNNNQRRSAEESTENRAANEDENKDVRKNKNSSQESSENNKRE
15 15 A V S S- 0 0 98 165 77 DADAAGSSPSAAAARASSSPPRPPRRRSRRSRRRARRRRRRSRRRSARARRSRRRRRSKKRPRRRSSRRA
16 16 A D + 0 0 77 164 67 TQTKTNQRRQLTTTGTSSRTTGTTGGGQDDGGGGgGGGDDGQGGGQkDkQGSGGGDGQEEGGDDGQQGGk
17 17 A K - 0 0 84 164 62 HRHKKKRMSKKKKKKKKKMKKNKKRRRNADNKRRkRRRAARNRRRNpApHRKRRRARNDDRDAARNNRRp
18 18 A K S S+ 0 0 68 165 69 KKKKQKKKKQNSSSLSKKKKKPKKEEEKAPPQQQMEEEAAEKQEEKGAGGLTELLTQPEEESAAEKKLRG
19 19 A b + 0 0 2 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
20 20 A Q S S- 0 0 75 165 47 QQQQQQQQQQQQQQEQQQQQQHQQDDDHQHHYEELDDDNNDHEDDHRQRQSQDETQNHHHEFNNDHHSSR
21 21 A c S S+ 0 0 34 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A D > + 0 0 52 165 14 DDDDDDDDDDDDDDDDDDDDDDDDDDDNDNNDDDDDDDDDDNDDDNDDDDDNDDDDDNDDDDDDDNNDDD
23 23 A E T 4 S- 0 0 0 164 82 NANSSISSSSSSSSPSMMSRRIRRAANSR.DVSSLSAAYYASSSSSNRNSSTAPSRPSAAPRYYASSSPN
24 24 A L T >> S+ 0 0 70 165 80 LLLMLIMMMMMMMMLMMMMMMDMMDDQKRKLEGGDQQDNNQKGQQKLRLNDNDDDRELEEDFNNDKKDDL
25 25 A d T 34 S+ 0 0 4 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
26 26 A S T 3< S+ 0 0 26 165 81 HVHKKVTKTKKTTTVTKKKKKVKKEEKSHQSSVVPKKKQQKTVKKSKPKLIAESISSTEETGQQESSIQK
27 27 A Y T <4 S+ 0 0 138 165 90 FYFYYHYYYYYYYYLYYYYYYSYYRRKQRQQRLLHQKKYYKQLQQRTRTLKTKQKRKQSSLDYYRQQKKT
28 28 A Y S < S- 0 0 103 165 20 YYYYYFYYYYYYYYYYYYYYYYYYYYYYHYYYHHFYYYYYYYHYYYYHYYYYYFFHFYHHYLYYYYYYFY
29 29 A Q S S- 0 0 5 165 74 KGKQREKRERKRRKNKGGRGGNGGGGGNGNSNNNRGDGMMDSNGGNYGYANGGSKGNNYYNGMMGNNNKY
30 30 A S + 0 0 26 165 59 SSSSSSSSSSSSSSTSSSSSSQSSKKKNDNNQSSDKKKEEKNSKKNSDSEQDKTQDQNNNTDEEKNNQQS
31 31 A b >> + 0 0 0 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A c T 34 S- 0 0 49 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A T T 34 S+ 0 0 152 165 79 VSVITIFYVSSSSTHTQQYEEPEEPPPSENTPPPPAPSPPPSPAASSESPSSPDPEPSEESPPPPSSSSS
34 34 A D T <4 S+ 0 0 33 165 2 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
35 35 A Y S < S- 0 0 6 165 3 YYYYYYFFFYFYYYYYFFFFFYFFYYYYYYYYYYYYYYYYYYYYYYFYFYYYYHYYYYYYYYFFYYYYFF
36 36 A T - 0 0 94 165 87 SASDALEEYEEEEEKEEEEDDEDDAADAESDRSSGDEEKKEASDDTEEDQKYQQKEKSYYHGKKAAAKQD
37 37 A A S S+ 0 0 47 165 73 TSTTSTAVTPSSSSLSTTVTTSTTKKDDHASKTTESSSKKSDTSSDEQDTNAKSTNKDEEGAKKEDDNTE
38 38 A E S S- 0 0 63 165 86 VTVVLLITIVTLLLNLTTTTTMTTHHFLLLQHHHLFFFVVFLHFFIHLHIHLHLQLHYHHQLVVHLLHYH
39 39 A d S S+ 0 0 24 165 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
40 40 A K S S- 0 0 99 146 68 RKRR K NHHRRRQQGRR RRKKEDSDSTDD ETT DEED T VDTE ETDSRREKTTKDDDD
41 41 A P + 0 0 30 135 71 L P P IPISSMTT TTEEA GDGIAA VV A S A EAQ SAETPP PVVETSAA
42 42 A Q + 0 0 69 127 63 K K K KQKKKTKK KKAAS EHGE EE D E DQQ EEND AEEEKKQ
43 43 A V - 0 0 69 125 65 V V E ALAIISII IIHHV ATVA LL A L T VKVV LLLQIIG
44 44 A T + 0 0 40 118 57 T V Q AAKAA AATT PTDK SS G S C D A TSSTSSS
45 45 A R - 0 0 120 105 50 R R R RRRRR RR RGPI G S P S KAA
46 46 A G S S+ 0 0 36 103 32 G G G GGPGG GG GGGP G G E T QGG
47 47 A D S S- 0 0 69 99 29 D D D DD DD DD GT D G E T NSS
48 48 A V S S+ 0 0 81 85 39 M V V VV MM MM
49 49 A F S S- 0 0 92 84 12 F F F FF FF FF
50 50 A T 0 0 103 75 61 A Q E DD DD DD
51 51 A M 0 0 190 67 20 F V I LL LL LL
## ALIGNMENTS 141 - 164
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A D 0 0 38 108 56 SS G E T S AT
2 2 A Q + 0 0 127 131 63 AA S K HHEKK R K AK
3 3 A E S S- 0 0 69 152 50 GG EDTN D TTLDD QDEDETNE
4 4 A S S S- 0 0 79 165 8 SSSSSSSSSSSSSSSSSSCSSSSC
5 5 A a S S+ 0 0 64 165 2 CCCCCCCCCCCCCCCCCCTCCCCT
6 6 A K > + 0 0 32 165 66 RREAQKQDKKRRKKKTSKKKASKK
7 7 A G T 3 S+ 0 0 0 165 18 GGGSGGGGGGNNGGGGGGDGSGGD
8 8 A R T 3 S+ 0 0 91 165 4 RRRRRRRRRRRRRRRRVRRRRRRR
9 9 A a < - 0 0 11 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
10 10 A T > + 0 0 58 164 83 FFGNGGSSGTYYFGGGGGGGSGGG
11 11 A E T 3 S+ 0 0 157 165 33 EEEEYEAAEEEEEEEEQEEEEEEE
12 12 A G T 3 S+ 0 0 56 165 58 LLSKGNAAPKAATPPGFRTPQQGV
13 13 A F S < S- 0 0 40 165 20 QQYFTYYYFYFFFFFYFFRFFYFR
14 14 A N S S+ 0 0 140 165 61 EENNDNNDNNDDVNNSEKNNDNRN
15 15 A V S S- 0 0 98 165 77 AAPRNSNNRKDDRRRRLRDRRSRE
16 16 A D + 0 0 77 164 67 ttNDGQKKGKeeGGGE.GDGDQGD
17 17 A K - 0 0 84 164 62 ppDAANWWNNppRNNH.RNNSNRN
18 18 A K S S+ 0 0 68 165 69 NNLASKPPPSGGEPPVWQAPAPRA
19 19 A b + 0 0 2 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
20 20 A Q S S- 0 0 75 165 47 RRHQQHQQHHRRDHHHSHHHQHSH
21 21 A c S S+ 0 0 34 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
22 22 A D > + 0 0 52 165 14 DDNDNNNNDNDDDDDDDDSDDNDS
23 23 A E T 4 S- 0 0 0 164 82 NNSRSSVVIKEEAIIYEIEIHSPE
24 24 A L T >> S+ 0 0 70 165 80 LLKRSKDDDKSSDDDSYEDDRLDD
25 25 A d T 34 S+ 0 0 4 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
26 26 A S T 3< S+ 0 0 26 165 81 KKSPETPPVDKKEVVQQFLVPSQL
27 27 A Y T <4 S+ 0 0 138 165 90 SSRRRQSSSKAAKSSHVKSSEQKA
28 28 A Y S < S- 0 0 103 165 20 YYYHFYYYYFTTYYYYYFRYHYFK
29 29 A Q S S- 0 0 5 165 74 NNNGRSGGNGNNGNNKRNGNGNKG
30 30 A S + 0 0 26 165 59 SSNDDNNNQNSSKQQERQDQDNQD
31 31 A b >> + 0 0 0 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
32 32 A c T 34 S- 0 0 49 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
33 33 A T T 34 S+ 0 0 152 165 79 LLEESSNSPSYYPPPPFPTPDSST
34 34 A D T <4 S+ 0 0 33 165 2 DDDDDDDDDDDDDDDDDDNDDDDN
35 35 A Y S < S- 0 0 6 165 3 FFYYYYYYYYFFYYYFYYYYYYFY
36 36 A T - 0 0 94 165 87 DDTKTASPEGFFPEENEEQEESQQ
37 37 A A S S+ 0 0 47 165 73 QQLHEDAASTDDKSSKATVSLQTV
38 38 A E S S- 0 0 63 165 86 LLILKLLLMALLHMMVVQVMLFYV
39 39 A d S S+ 0 0 24 165 0 CCCCCCCCCCCCCCCCCCCCCCCC
40 40 A K S S- 0 0 99 146 68 GTKGLQLGKKELLTKTKLADDK
41 41 A P + 0 0 30 135 71 EEAAAGIGAAEIIGELGIASAG
42 42 A Q + 0 0 69 127 63 PDGSGVEK AEEAEEEEESAE
43 43 A V - 0 0 69 125 65 IHAAITEA LEEVSDTEEAES
44 44 A T + 0 0 40 118 57 TKTG TSN TSSSETHSDGHH
45 45 A R - 0 0 120 105 50 DESG S TSS K WSSKRW
46 46 A G S S+ 0 0 36 103 32 AS G N KNN S VNTG V
47 47 A D S S- 0 0 69 99 29 EE S E PEE DEES D
48 48 A V S S+ 0 0 81 85 39 P V E SEE E
49 49 A F S S- 0 0 92 84 12 F M FMM M
50 50 A T 0 0 103 75 61 P T TT T
51 51 A M 0 0 190 67 20
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 6 14 0 7 5 0 0 0 0 6 6 0 56 108 0 0 1.451 48 0.43
2 2 A 2 2 0 0 0 0 0 0 8 0 4 0 0 2 2 9 44 27 0 2 131 0 0 1.599 53 0.36
3 3 A 0 5 0 0 0 0 0 5 0 0 2 7 0 1 0 0 2 61 5 13 152 0 0 1.389 46 0.50
4 4 A 0 0 0 0 0 0 0 0 0 0 95 4 1 0 0 0 0 0 0 0 165 0 0 0.241 8 0.91
5 5 A 0 0 0 0 0 0 0 0 0 0 0 1 99 0 0 0 0 0 0 0 165 0 0 0.066 2 0.97
6 6 A 6 3 2 2 0 0 0 0 11 0 2 1 0 0 5 54 4 8 1 1 165 0 0 1.690 56 0.34
7 7 A 0 0 0 0 0 0 1 85 0 0 4 0 0 0 0 0 0 2 2 7 165 0 0 0.634 21 0.82
8 8 A 1 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 0 0 0 165 0 0 0.128 4 0.96
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 1 0 0.000 0 1.00
10 10 A 0 1 0 0 13 0 1 24 1 0 2 31 0 0 2 1 1 11 4 7 164 0 0 1.926 64 0.16
11 11 A 0 0 0 0 0 0 1 1 2 0 7 0 0 0 0 1 4 70 7 8 165 0 0 1.131 37 0.67
12 12 A 1 4 0 0 1 0 0 62 4 6 9 4 0 1 1 5 1 1 1 0 165 0 0 1.488 49 0.41
13 13 A 0 1 0 0 80 0 14 0 0 1 0 1 0 0 1 0 1 2 0 0 165 0 0 0.726 24 0.80
14 14 A 2 0 4 2 0 0 0 0 2 0 5 2 0 0 4 3 1 8 44 21 165 0 0 1.799 60 0.39
15 15 A 3 1 0 0 0 0 0 3 39 6 15 0 0 0 26 2 1 1 2 3 165 1 0 1.725 57 0.22
16 16 A 0 2 0 1 0 0 0 23 1 0 4 10 0 0 2 7 9 10 7 24 164 0 8 2.114 70 0.32
17 17 A 0 0 0 1 0 1 0 0 5 4 1 0 0 3 32 36 1 1 10 3 164 0 0 1.721 57 0.38
18 18 A 1 4 0 1 0 1 0 4 6 7 4 1 0 0 1 56 5 9 2 0 165 0 0 1.689 56 0.31
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
20 20 A 0 1 0 0 1 0 1 0 0 0 3 1 0 14 4 0 62 4 3 7 165 0 0 1.350 45 0.52
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 10 89 165 1 0 0.383 12 0.86
23 23 A 2 1 7 1 0 0 3 0 7 4 21 5 0 1 5 1 0 35 5 2 164 0 0 2.065 68 0.17
24 24 A 0 50 1 12 1 0 1 2 0 0 2 0 0 0 3 5 4 3 4 14 165 0 0 1.739 58 0.19
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
26 26 A 11 2 2 0 1 0 0 1 1 4 37 9 0 2 0 18 5 5 2 1 165 0 0 2.019 67 0.19
27 27 A 1 4 0 0 1 0 55 0 2 0 7 2 0 4 7 8 8 1 0 1 165 0 0 1.675 55 0.10
28 28 A 0 1 0 0 6 0 85 0 0 0 0 1 0 6 1 1 0 0 0 0 165 0 0 0.626 20 0.80
29 29 A 0 0 0 2 0 0 3 18 1 0 2 0 0 0 7 7 39 4 16 1 165 0 0 1.832 61 0.25
30 30 A 0 0 0 0 0 0 0 0 0 0 62 2 0 0 1 7 8 4 10 7 165 0 0 1.316 43 0.41
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
33 33 A 4 1 5 1 1 0 4 0 13 17 24 13 0 1 0 0 1 12 1 1 165 0 0 2.175 72 0.20
34 34 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 98 165 0 0 0.102 3 0.98
35 35 A 0 0 0 0 19 0 80 0 0 0 0 0 0 1 0 0 0 0 0 0 165 0 0 0.528 17 0.97
36 36 A 14 1 2 11 2 0 2 2 8 1 10 8 0 1 1 7 4 17 1 8 165 0 0 2.503 83 0.12
37 37 A 2 2 0 0 0 0 0 1 32 2 15 20 0 1 0 7 2 8 2 7 165 0 0 2.016 67 0.26
38 38 A 16 16 4 3 5 0 2 0 2 0 0 8 0 10 0 1 6 27 1 0 165 0 0 2.134 71 0.13
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 165 0 0 0.000 0 1.00
40 40 A 1 3 0 0 0 1 0 3 1 0 2 8 0 1 10 51 3 5 3 10 146 0 0 1.800 60 0.32
41 41 A 3 1 5 1 0 0 0 5 16 47 5 6 0 1 1 0 1 7 0 1 135 0 0 1.834 61 0.28
42 42 A 1 0 0 0 0 0 0 2 5 2 2 1 0 1 0 24 44 15 1 3 127 0 0 1.634 54 0.37
43 43 A 58 6 8 0 0 0 0 1 7 0 2 3 0 2 0 1 1 10 0 1 125 0 0 1.554 51 0.34
44 44 A 1 0 0 0 0 0 0 3 6 1 13 66 1 3 0 3 1 1 1 3 118 0 0 1.319 44 0.43
45 45 A 0 0 1 0 0 2 0 3 2 2 8 1 0 0 77 3 0 1 0 1 105 0 0 1.003 33 0.50
46 46 A 2 0 0 0 0 0 0 84 1 2 2 2 0 0 0 1 1 1 4 0 103 0 0 0.755 25 0.68
47 47 A 0 0 0 0 0 0 0 2 0 1 4 2 0 0 0 0 0 8 1 82 99 0 0 0.748 24 0.71
48 48 A 85 0 0 7 0 0 0 0 1 1 1 0 0 0 0 0 0 5 0 0 85 0 0 0.628 20 0.60
49 49 A 0 2 0 5 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 84 0 0 0.303 10 0.87
50 50 A 1 0 0 0 0 0 0 0 17 1 0 59 0 5 0 0 1 7 0 8 75 0 0 1.328 44 0.39
51 51 A 1 51 7 37 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 1.073 35 0.80
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
105 17 150 2 gNDk
117 17 65 1 kPp
119 17 20 1 kPp
140 17 65 1 kPp
141 17 67 1 tPp
142 17 67 1 tPp
151 16 67 1 eTp
152 16 66 1 eTp
//