Complet list of 1qyp hssp file
Complete list of 1qyp.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1QYP
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-07
HEADER TRANSCRIPTION 19-AUG-97 1QYP
COMPND MOL_ID: 1; MOLECULE: RNA POLYMERASE II; CHAIN: A; FRAGMENT: SUBUNIT RP
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: THERMOCOCCUS CELER; ORGANISM_TAXID: 22
AUTHOR B.WANG,D.N.M.JONES,B.P.KAINE,M.A.WEISS
DBREF 1QYP A 5 57 UNP Q56254 RPOM_THECE 58 110
SEQLENGTH 57
NCHAIN 1 chain(s) in 1QYP data set
NALIGN 569
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : RPOM_THECE 1.00 1.00 5 57 58 110 53 0 0 110 Q56254 DNA-directed RNA polymerase subunit M OS=Thermococcus celer GN=rpoM PE=1 SV=1
2 : Q4TTY9_9EURY 0.94 1.00 5 57 58 110 53 0 0 110 Q4TTY9 DNA-directed RNA polymerase subunit OS=Thermococcus thioreducens GN=rpoM PE=3 SV=1
3 : Q5JF34_THEKO 0.94 0.98 5 57 58 110 53 0 0 110 Q5JF34 DNA-directed RNA polymerase subunit OS=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=TK0533 PE=3 SV=1
4 : C5A5N8_THEGJ 0.92 0.96 5 57 58 110 53 0 0 110 C5A5N8 DNA-directed RNA polymerase subunit OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=tfs PE=3 SV=1
5 : I3ZWH8_9EURY 0.92 0.98 5 57 58 110 53 0 0 110 I3ZWH8 DNA-directed RNA polymerase subunit OS=Thermococcus sp. CL1 GN=CL1_1867 PE=3 SV=1
6 : B7R0T6_9EURY 0.91 0.96 5 57 58 110 53 0 0 110 B7R0T6 DNA-directed RNA polymerase subunit OS=Thermococcus sp. AM4 GN=TAM4_877 PE=3 SV=1
7 : G0HKD3_THES4 0.91 0.96 5 57 58 110 53 0 0 110 G0HKD3 DNA-directed RNA polymerase subunit OS=Thermococcus sp. (strain CGMCC 1.5172 / 4557) GN=GQS_00805 PE=3 SV=1
8 : B6YVY9_THEON 0.89 0.91 5 57 58 110 53 0 0 110 B6YVY9 DNA-directed RNA polymerase subunit OS=Thermococcus onnurineus (strain NA1) GN=TON_0824 PE=3 SV=1
9 : F0LIX1_THEBM 0.85 0.91 4 57 56 109 54 0 0 109 F0LIX1 DNA-directed RNA polymerase subunit OS=Thermococcus barophilus (strain DSM 11836 / MP) GN=TERMP_00340 PE=3 SV=1
10 : H3ZPL5_THELI 0.85 0.91 4 57 55 108 54 0 0 108 H3ZPL5 DNA-directed RNA polymerase subunit OS=Thermococcus litoralis DSM 5473 GN=OCC_04355 PE=3 SV=1
11 : W0I1B7_9EURY 0.83 0.91 4 57 56 109 54 0 0 109 W0I1B7 DNA-directed RNA polymerase subunit OS=Thermococcus sp. ES1 GN=TES1_0410 PE=3 SV=1
12 : C6A1Y3_THESM 0.81 0.91 4 57 55 108 54 0 0 108 C6A1Y3 DNA-directed RNA polymerase subunit OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=TSIB_0563 PE=3 SV=1
13 : F8AEM5_PYRYC 0.74 0.91 4 57 57 110 54 0 0 110 F8AEM5 DNA-directed RNA polymerase subunit OS=Pyrococcus yayanosii (strain CH1 / JCM 16557) GN=PYCH_10220 PE=3 SV=1
14 : I3REL1_9EURY 0.74 0.89 4 57 57 110 54 0 0 110 I3REL1 DNA-directed RNA polymerase subunit OS=Pyrococcus sp. ST04 GN=Py04_1096 PE=3 SV=1
15 : I6UYQ0_9EURY 0.74 0.89 4 57 56 109 54 0 0 109 I6UYQ0 DNA-directed RNA polymerase subunit OS=Pyrococcus furiosus COM1 GN=PFC_04155 PE=3 SV=1
16 : Q8U264_PYRFU 0.74 0.89 4 57 57 110 54 0 0 110 Q8U264 DNA-directed RNA polymerase subunit OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=PF0986 PE=3 SV=1
17 : O58397_PYRHO 0.72 0.85 4 57 57 110 54 0 0 110 O58397 DNA-directed RNA polymerase subunit OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=PH0664 PE=3 SV=1
18 : Q9UYX7_PYRAB 0.72 0.85 4 57 57 110 54 0 0 110 Q9UYX7 DNA-directed RNA polymerase subunit OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=PAB1464 PE=3 SV=1
19 : D3S3Q1_METSF 0.70 0.80 8 57 59 108 50 0 0 108 D3S3Q1 DNA-directed RNA polymerase subunit OS=Methanocaldococcus sp. (strain FS406-22) GN=MFS40622_0780 PE=3 SV=1
20 : F4HNP9_PYRSN 0.70 0.85 4 57 57 110 54 0 0 110 F4HNP9 DNA-directed RNA polymerase subunit OS=Pyrococcus sp. (strain NA2) GN=PNA2_1278 PE=3 SV=1
21 : RPOM_METJA 0.70 0.80 8 57 59 108 50 0 0 108 Q58548 DNA-directed RNA polymerase subunit M OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=rpoM PE=3 SV=1
22 : C9RF97_METVM 0.69 0.78 7 57 57 107 51 0 0 107 C9RF97 DNA-directed RNA polymerase subunit OS=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) GN=Metvu_0386 PE=3 SV=1
23 : D5TZM3_THEAM 0.69 0.81 11 57 67 114 48 1 1 114 D5TZM3 DNA-directed RNA polymerase subunit OS=Thermosphaera aggregans (strain DSM 11486 / M11TL) GN=Tagg_0041 PE=3 SV=1
24 : F8AN12_METOI 0.69 0.81 6 57 54 105 52 0 0 105 F8AN12 DNA-directed RNA polymerase subunit OS=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) GN=Metok_0144 PE=3 SV=1
25 : G4RNV1_THETK 0.69 0.79 9 56 61 108 48 0 0 109 G4RNV1 DNA-directed RNA polymerase subunit OS=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) GN=rpoM PE=3 SV=1
26 : A8AAT2_IGNH4 0.68 0.78 9 57 64 113 50 1 1 113 A8AAT2 DNA-directed RNA polymerase subunit OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0852 PE=3 SV=1
27 : A4WLS3_PYRAR 0.67 0.75 11 57 63 110 48 1 1 110 A4WLS3 DNA-directed RNA polymerase subunit OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1789 PE=3 SV=1
28 : A6UTI3_META3 0.67 0.81 6 57 52 103 52 0 0 103 A6UTI3 DNA-directed RNA polymerase subunit OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0213 PE=3 SV=1
29 : C7P7U4_METFA 0.67 0.80 9 57 60 108 49 0 0 108 C7P7U4 DNA-directed RNA polymerase subunit OS=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) GN=Mefer_0808 PE=3 SV=1
30 : F2L1Y2_THEU7 0.67 0.78 11 56 52 97 46 0 0 98 F2L1Y2 Transcription termination factor Tfs OS=Thermoproteus uzoniensis (strain 768-20) GN=TUZN_0225 PE=4 SV=1
31 : H6Q6Y8_PYROT 0.67 0.75 11 57 63 110 48 1 1 110 H6Q6Y8 DNA-directed RNA polymerase subunit OS=Pyrobaculum oguniense (strain DSM 13380 / JCM 10595 / TE7) GN=Pogu_0342 PE=3 SV=1
32 : K0IHM2_NITGG 0.67 0.93 11 56 48 93 46 0 0 94 K0IHM2 Putative DNA-directed RNA polymerase subunit M OS=Nitrososphaera gargensis (strain Ga9.2) GN=rpoM PE=4 SV=1
33 : N6VZ68_9EURY 0.67 0.76 9 57 59 107 49 0 0 107 N6VZ68 DNA-directed RNA polymerase subunit OS=Methanocaldococcus villosus KIN24-T80 GN=J422_02574 PE=3 SV=1
34 : D5VRR1_METIM 0.66 0.76 8 57 55 104 50 0 0 104 D5VRR1 DNA-directed RNA polymerase subunit OS=Methanocaldococcus infernus (strain DSM 11812 / JCM 15783 / ME) GN=Metin_0595 PE=3 SV=1
35 : E8RAF2_DESM0 0.66 0.81 11 56 67 113 47 1 1 114 E8RAF2 DNA-directed RNA polymerase subunit OS=Desulfurococcus mucosus (strain ATCC 35584 / DSM 2162 / JCM 9187 / O7/1) GN=Desmu_0043 PE=3 SV=1
36 : F3KLU9_9ARCH 0.66 0.81 10 56 56 102 47 0 0 103 F3KLU9 DNA-directed RNA polymerase subunit OS=Candidatus Nitrosoarchaeum limnia SFB1 GN=Nlim_1482 PE=3 SV=1
37 : F9CUG6_9ARCH 0.66 0.81 10 56 56 102 47 0 0 103 F9CUG6 DNA-directed RNA polymerase subunit OS=Candidatus Nitrosoarchaeum koreensis MY1 GN=MY1_1855 PE=3 SV=1
38 : S2E7Y4_9ARCH 0.66 0.81 10 56 56 102 47 0 0 103 S2E7Y4 DNA-directed RNA polymerase subunit OS=Candidatus Nitrosoarchaeum limnia BG20 GN=BG20_I0973 PE=3 SV=1
39 : I3RKW1_9ARCH 0.65 0.87 11 56 43 88 46 0 0 89 I3RKW1 Putative transcription termination factor TFIIS OS=uncultured archaeon GN=Josef01_19c08_28 PE=4 SV=1
40 : I3XPT1_9CREN 0.65 0.78 12 56 68 113 46 1 1 114 I3XPT1 DNA-directed RNA polymerase subunit OS=Desulfurococcus fermentans DSM 16532 GN=Desfe_0042 PE=3 SV=1
41 : K2REJ9_METFO 0.65 0.78 7 57 54 104 51 0 0 104 K2REJ9 DNA-directed RNA polymerase subunit OS=Methanobacterium formicicum DSM 3637 GN=A994_00895 PE=3 SV=1
42 : Q9P9I8_METTL 0.65 0.75 6 57 54 105 52 0 0 105 Q9P9I8 DNA-directed RNA polymerase subunit OS=Methanothermococcus thermolithotrophicus GN=tfs PE=3 SV=1
43 : F0QUL5_VULM7 0.64 0.74 11 57 54 100 47 0 0 100 F0QUL5 DNA-directed RNA polymerase subunit OS=Vulcanisaeta moutnovskia (strain 768-28) GN=VMUT_0464 PE=3 SV=1
44 : G0EET8_PYRF1 0.64 0.81 11 57 68 114 47 0 0 114 G0EET8 DNA-directed RNA polymerase subunit OS=Pyrolobus fumarii (strain DSM 11204 / 1A) GN=Pyrfu_0180 PE=3 SV=1
45 : V6AVR5_9ARCH 0.64 0.81 10 56 51 97 47 0 0 98 V6AVR5 DNA-directed RNA polymerase subunit M OS=Thaumarchaeota archaeon N4 GN=rpoM PE=4 SV=1
46 : A8MBQ2_CALMQ 0.63 0.78 9 57 67 115 49 0 0 115 A8MBQ2 DNA-directed RNA polymerase subunit OS=Caldivirga maquilingensis (strain ATCC 700844 / DSM 13496 / JCM 10307 / IC-167) GN=Cmaq_0399 PE=3 SV=1
47 : H1KZD4_9EURY 0.63 0.77 6 57 54 105 52 0 0 105 H1KZD4 DNA-directed RNA polymerase subunit OS=Methanotorris formicicus Mc-S-70 GN=MetfoDRAFT_1157 PE=3 SV=1
48 : K6TWL1_9EURY 0.63 0.76 7 57 54 104 51 0 0 104 K6TWL1 DNA-directed RNA polymerase subunit OS=Methanobacterium sp. Maddingley MBC34 GN=B655_2064 PE=3 SV=1
49 : F6BCY6_METIK 0.62 0.77 6 57 54 105 52 0 0 105 F6BCY6 DNA-directed RNA polymerase subunit OS=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) GN=Metig_0802 PE=3 SV=1
50 : G7VET5_9CREN 0.62 0.72 6 57 57 109 53 1 1 109 G7VET5 DNA-directed RNA polymerase subunit OS=Pyrobaculum sp. 1860 GN=P186_1478 PE=3 SV=1
51 : G7WMB6_METH6 0.62 0.74 11 57 47 93 47 0 0 93 G7WMB6 DNA-directed RNA polymerase subunit M OS=Methanosaeta harundinacea (strain 6Ac) GN=Mhar_0395 PE=4 SV=1
52 : M1P8N4_METMZ 0.62 0.77 11 57 49 95 47 0 0 95 M1P8N4 Transcription factor S OS=Methanosarcina mazei Tuc01 GN=MmTuc01_1457 PE=4 SV=1
53 : Q8PX24_METMA 0.62 0.77 11 57 61 107 47 0 0 107 Q8PX24 DNA-directed RNA polymerase subunit OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=MM_1398 PE=3 SV=1
54 : Q8TUF5_METAC 0.62 0.79 11 57 58 104 47 0 0 104 Q8TUF5 DNA-directed RNA polymerase subunit OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=MA_0112 PE=3 SV=1
55 : A0B7Y7_METTP 0.61 0.76 4 57 32 85 54 0 0 85 A0B7Y7 DNA-directed RNA polymerase, subunit M OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=Mthe_1026 PE=4 SV=1
56 : F6D506_METSW 0.61 0.73 7 57 55 105 51 0 0 105 F6D506 DNA-directed RNA polymerase subunit OS=Methanobacterium sp. (strain SWAN-1) GN=MSWAN_2279 PE=3 SV=1
57 : F7XM59_METZD 0.61 0.76 12 57 59 104 46 0 0 104 F7XM59 DNA-directed RNA polymerase subunit OS=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) GN=Mzhil_1679 PE=3 SV=1
58 : V4K1R5_9CREN 0.61 0.72 11 56 74 118 46 1 1 119 V4K1R5 DNA-directed RNA polymerase subunit OS=uncultured Acidilobus sp. JCHS GN=JCHSAcid_10580 PE=3 SV=1
59 : V4K275_9CREN 0.61 0.72 11 56 74 118 46 1 1 119 V4K275 DNA-directed RNA polymerase subunit OS=uncultured Acidilobus sp. MG GN=MGAcid_04320 PE=3 SV=1
60 : V4K5S2_9CREN 0.61 0.72 11 56 74 118 46 1 1 119 V4K5S2 DNA-directed RNA polymerase subunit OS=uncultured Acidilobus sp. OSP8 GN=OSP8Acid_06300 PE=3 SV=1
61 : A5UMY1_METS3 0.60 0.77 6 57 53 104 52 0 0 104 A5UMY1 DNA-directed RNA polymerase subunit OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_1354 PE=3 SV=1
62 : B9AFZ6_METSM 0.60 0.77 6 57 53 104 52 0 0 104 B9AFZ6 DNA-directed RNA polymerase subunit OS=Methanobrevibacter smithii DSM 2375 GN=METSMIALI_01297 PE=3 SV=1
63 : D2RHU3_ARCPA 0.60 0.74 4 56 48 100 53 0 0 101 D2RHU3 DNA-directed RNA polymerase subunit OS=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) GN=Arcpr_0805 PE=3 SV=1
64 : D2ZNN1_METSM 0.60 0.77 6 57 53 104 52 0 0 104 D2ZNN1 DNA-directed RNA polymerase subunit OS=Methanobrevibacter smithii DSM 2374 GN=METSMIF1_02437 PE=3 SV=1
65 : E3GW48_METFV 0.60 0.76 8 57 56 105 50 0 0 105 E3GW48 DNA-directed RNA polymerase subunit OS=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) GN=Mfer_1018 PE=3 SV=1
66 : F2KPJ6_ARCVS 0.60 0.76 8 57 55 104 50 0 0 104 F2KPJ6 DNA-directed RNA polymerase subunit OS=Archaeoglobus veneficus (strain DSM 11195 / SNP6) GN=Arcve_0394 PE=3 SV=1
67 : J3A7A3_9EURY 0.60 0.70 9 55 48 94 47 0 0 97 J3A7A3 Uncharacterized protein OS=Halogranum salarium B-1 GN=HSB1_05140 PE=4 SV=1
68 : N0BJC1_9EURY 0.60 0.72 8 57 53 102 50 0 0 102 N0BJC1 DNA-directed RNA polymerase subunit OS=Archaeoglobus sulfaticallidus PM70-1 GN=Asulf_00226 PE=3 SV=1
69 : R7PXA5_9EURY 0.60 0.77 6 57 53 104 52 0 0 104 R7PXA5 DNA-directed RNA polymerase subunit OS=Methanobrevibacter smithii CAG:186 GN=BN522_01616 PE=3 SV=1
70 : RPOM_ARCFU 0.60 0.76 8 57 54 103 50 0 0 103 O29033 DNA-directed RNA polymerase subunit M OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=rpoM PE=3 SV=1
71 : A3DM83_STAMF 0.59 0.74 5 57 51 104 54 1 1 104 A3DM83 DNA-directed RNA polymerase subunit OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0637 PE=3 SV=1
72 : A4FW95_METM5 0.59 0.76 4 57 52 105 54 0 0 105 A4FW95 DNA-directed RNA polymerase subunit OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0149 PE=3 SV=1
73 : A6VH15_METM7 0.59 0.76 4 57 52 105 54 0 0 105 A6VH15 DNA-directed RNA polymerase subunit OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=MmarC7_0674 PE=3 SV=1
74 : A9A9N4_METM6 0.59 0.76 4 57 52 105 54 0 0 105 A9A9N4 DNA-directed RNA polymerase subunit OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=MmarC6_1244 PE=3 SV=1
75 : G0H2H5_METMI 0.59 0.78 4 57 52 105 54 0 0 105 G0H2H5 DNA-directed RNA polymerase subunit OS=Methanococcus maripaludis X1 GN=GYY_07980 PE=3 SV=1
76 : Q6LXC3_METMP 0.59 0.78 4 57 52 105 54 0 0 105 Q6LXC3 DNA-directed RNA polymerase subunit OS=Methanococcus maripaludis (strain S2 / LL) GN=rpm PE=3 SV=1
77 : R9SLC6_9EURY 0.59 0.75 7 57 55 105 51 0 0 105 R9SLC6 DNA-directed RNA polymerase subunit OS=Methanobrevibacter sp. AbM4 GN=tfs2 PE=3 SV=1
78 : RPOM_METTH 0.59 0.80 7 57 54 104 51 0 0 104 O27369 DNA-directed RNA polymerase subunit M OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=rpoM PE=3 SV=2
79 : T1BVW4_9ZZZZ 0.59 0.72 4 57 40 93 54 0 0 93 T1BVW4 Transcription termination factor Tfs OS=mine drainage metagenome GN=B1B_03585 PE=4 SV=1
80 : T2GK72_METTF 0.59 0.80 7 57 44 94 51 0 0 94 T2GK72 Transcription elongation factor TFIIS OS=Methanothermobacter thermautotrophicus CaT2 GN=MTCT_1191 PE=4 SV=1
81 : A1RRN5_PYRIL 0.58 0.72 6 57 58 110 53 1 1 110 A1RRN5 DNA-directed RNA polymerase subunit OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0439 PE=3 SV=1
82 : A3MUU7_PYRCJ 0.58 0.69 4 57 70 124 55 1 1 124 A3MUU7 DNA-directed RNA polymerase subunit OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=Pcal_0989 PE=3 SV=1
83 : B1YAF4_PYRNV 0.58 0.73 4 57 56 110 55 1 1 110 B1YAF4 DNA-directed RNA polymerase subunit OS=Pyrobaculum neutrophilum (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1681 PE=3 SV=1
84 : D3RYJ2_FERPA 0.58 0.77 6 57 51 102 52 0 0 102 D3RYJ2 DNA-directed RNA polymerase subunit OS=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) GN=Ferp_1404 PE=3 SV=1
85 : Q2NE53_METST 0.58 0.78 8 57 56 105 50 0 0 105 Q2NE53 DNA-directed RNA polymerase subunit OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=rpoM1 PE=3 SV=1
86 : Q46E40_METBF 0.58 0.74 8 57 55 104 50 0 0 104 Q46E40 DNA-directed RNA polymerase subunit OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A0878 PE=3 SV=1
87 : R1E3Q9_9ARCH 0.58 0.67 4 57 50 104 55 1 1 104 R1E3Q9 DNA-directed RNA polymerase subunit OS=nanoarchaeote Nst1 GN=Nst1_548 PE=3 SV=1
88 : T0YGJ6_9ZZZZ 0.58 0.75 10 57 56 103 48 0 0 103 T0YGJ6 DNA-directed RNA polymerase, subunit M, archaeal OS=mine drainage metagenome GN=B2A_12752 PE=4 SV=1
89 : U6EDE9_9EURY 0.58 0.75 6 57 53 104 52 0 0 104 U6EDE9 DNA-directed RNA polymerase subunit OS=Methanobacterium sp. MB1 GN=MBMB1_1925 PE=3 SV=1
90 : A9A2X5_NITMS 0.57 0.76 6 56 54 104 51 0 0 105 A9A2X5 DNA-directed RNA polymerase subunit OS=Nitrosopumilus maritimus (strain SCM1) GN=Nmar_1756 PE=3 SV=1
91 : B5ID90_ACIB4 0.57 0.68 5 56 42 94 53 1 1 94 B5ID90 Transcription factor S OS=Aciduliprofundum boonei (strain DSM 19572 / T469) GN=ABOONEI_1538 PE=4 SV=1
92 : D7DAV1_STAHD 0.57 0.74 5 57 51 104 54 1 1 104 D7DAV1 DNA-directed RNA polymerase subunit OS=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) GN=Shell_0155 PE=3 SV=1
93 : D7DUB7_METV3 0.57 0.76 4 57 52 105 54 0 0 105 D7DUB7 DNA-directed RNA polymerase subunit OS=Methanococcus voltae (strain ATCC BAA-1334 / A3) GN=Mvol_1070 PE=3 SV=1
94 : D9PYH1_METTM 0.57 0.76 7 57 54 104 51 0 0 104 D9PYH1 DNA-directed RNA polymerase subunit OS=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) GN=rpoM PE=3 SV=1
95 : H1Z3K6_9EURY 0.57 0.75 5 57 52 104 53 0 0 104 H1Z3K6 DNA-directed RNA polymerase subunit OS=Methanoplanus limicola DSM 2279 GN=Metlim_0678 PE=3 SV=1
96 : Q12U17_METBU 0.57 0.72 12 57 58 103 46 0 0 103 Q12U17 DNA-directed RNA polymerase subunit OS=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) GN=rpoM PE=3 SV=1
97 : D3T9I3_ACIB4 0.56 0.67 6 56 52 103 52 1 1 103 D3T9I3 DNA-directed RNA polymerase subunit OS=Aciduliprofundum boonei (strain DSM 19572 / T469) GN=Aboo_0953 PE=3 SV=1
98 : L0HNG4_ACIS0 0.56 0.67 6 56 53 104 52 1 1 104 L0HNG4 DNA-directed RNA polymerase subunit OS=Aciduliprofundum sp. (strain MAR08-339) GN=AciM339_1006 PE=3 SV=1
99 : M1I1H6_9CREN 0.56 0.68 1 57 56 111 57 1 1 111 M1I1H6 DNA-directed RNA polymerase subunit OS=Sulfolobus acidocaldarius N8 GN=SacN8_00810 PE=3 SV=1
100 : M1I956_9CREN 0.56 0.68 1 57 56 111 57 1 1 111 M1I956 DNA-directed RNA polymerase subunit OS=Sulfolobus acidocaldarius Ron12/I GN=SacRon12I_00810 PE=3 SV=1
101 : M9SAX8_9EURY 0.56 0.71 4 55 50 101 52 0 0 102 M9SAX8 DNA-directed RNA polymerase subunit OS=Candidatus Methanomethylophilus alvus Mx1201 GN=MMALV_01780 PE=3 SV=2
102 : Q8ZTX9_PYRAE 0.56 0.67 4 57 56 110 55 1 1 110 Q8ZTX9 DNA-directed RNA polymerase subunit OS=Pyrobaculum aerophilum (strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=PAE3040 PE=3 SV=1
103 : R7PZ01_9EURY 0.56 0.71 4 55 39 90 52 0 0 91 R7PZ01 DNA-directed RNA polymerase subunit OS=Methanoculleus sp. CAG:1088 GN=BN463_01321 PE=4 SV=1
104 : RPOM_SULAC 0.56 0.68 1 57 56 111 57 1 1 111 Q07271 DNA-directed RNA polymerase subunit M OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=rpoM PE=3 SV=2
105 : T1BX23_9ZZZZ 0.56 0.69 4 50 40 87 48 1 1 97 T1BX23 DNA-directed RNA polymerase subunit M (Fragment) OS=mine drainage metagenome GN=B1A_04463 PE=4 SV=1
106 : V9S6G9_9CREN 0.56 0.68 1 57 56 111 57 1 1 111 V9S6G9 DNA-directed RNA polymerase subunit OS=Sulfolobus acidocaldarius SUSAZ GN=SUSAZ_00860 PE=3 SV=1
107 : F0T7W8_METSL 0.55 0.80 7 57 55 105 51 0 0 105 F0T7W8 DNA-directed RNA polymerase subunit OS=Methanobacterium sp. (strain AL-21) GN=Metbo_0203 PE=3 SV=1
108 : I0A277_FERFK 0.55 0.68 2 57 50 104 56 1 1 104 I0A277 DNA-directed RNA polymerase subunit OS=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) GN=FFONT_1096 PE=3 SV=1
109 : L0HJ08_METFS 0.55 0.75 2 57 49 104 56 0 0 104 L0HJ08 DNA-directed RNA polymerase subunit OS=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) GN=Metfor_2283 PE=3 SV=1
110 : M0DJJ9_9EURY 0.55 0.64 9 55 57 103 47 0 0 106 M0DJJ9 DNA-directed RNA polymerase subunit OS=Halorubrum tebenquichense DSM 14210 GN=C472_11429 PE=3 SV=1
111 : M0ECZ5_9EURY 0.55 0.64 9 55 57 103 47 0 0 106 M0ECZ5 DNA-directed RNA polymerase subunit OS=Halorubrum californiensis DSM 19288 GN=C463_07347 PE=3 SV=1
112 : M0FQ77_9EURY 0.55 0.64 9 55 57 103 47 0 0 106 M0FQ77 DNA-directed RNA polymerase subunit OS=Halorubrum hochstenium ATCC 700873 GN=C467_01376 PE=3 SV=1
113 : B3TAR2_9ARCH 0.54 0.67 10 56 58 105 48 1 1 106 B3TAR2 DNA-directed RNA polymerase subunit OS=uncultured marine crenarchaeote HF4000_APKG8G15 GN=ALOHA_HF4000APKG8G15ctg1g9 PE=3 SV=1
114 : E1RIW2_METP4 0.54 0.75 6 57 53 104 52 0 0 104 E1RIW2 DNA-directed RNA polymerase subunit OS=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) GN=Mpet_0776 PE=3 SV=1
115 : F4B3S4_ACIHW 0.54 0.70 2 57 47 100 56 1 2 100 F4B3S4 DNA-directed RNA polymerase subunit OS=Acidianus hospitalis (strain W1) GN=Ahos_1228 PE=3 SV=1
116 : A1RXU9_THEPD 0.53 0.66 4 56 56 108 53 0 0 109 A1RXU9 DNA-directed RNA polymerase subunit OS=Thermofilum pendens (strain Hrk 5) GN=Tpen_0625 PE=3 SV=1
117 : A6UQ74_METVS 0.53 0.70 1 57 49 105 57 0 0 105 A6UQ74 DNA-directed RNA polymerase subunit OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=Mevan_0740 PE=3 SV=1
118 : K0BF27_9ARCH 0.53 0.69 6 56 54 104 51 0 0 105 K0BF27 DNA-directed RNA polymerase subunit OS=Candidatus Nitrosopumilus sp. AR2 GN=NSED_09350 PE=3 SV=1
119 : M0EGJ6_9EURY 0.53 0.64 9 55 48 94 47 0 0 97 M0EGJ6 Transcription factor TFIIS OS=Halorubrum coriense DSM 10284 GN=C464_11373 PE=4 SV=1
120 : S6A5K7_9CREN 0.53 0.68 4 56 46 98 53 0 0 99 S6A5K7 Uncharacterized protein OS=Thermofilum sp. 1910b GN=N186_04480 PE=4 SV=1
121 : D1Z116_METPS 0.52 0.69 11 57 47 94 48 1 1 94 D1Z116 Archaeal transcription factor S OS=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) GN=tfs PE=4 SV=1
122 : E6N523_9ARCH 0.52 0.74 4 56 56 109 54 1 1 110 E6N523 DNA-directed RNA polymerase subunit OS=Candidatus Caldiarchaeum subterraneum GN=CSUB_C0417 PE=3 SV=1
123 : F4BTF9_METCG 0.52 0.72 4 57 49 102 54 0 0 102 F4BTF9 DNA-directed RNA polymerase subunit OS=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) GN=rpoM PE=3 SV=1
124 : H8I9H8_METCZ 0.52 0.71 11 57 48 95 48 1 1 95 H8I9H8 DNA-directed RNA polymerase, subunit M OS=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) GN=tfs PE=4 SV=1
125 : K0B9Q3_9ARCH 0.52 0.73 1 56 51 103 56 1 3 104 K0B9Q3 DNA-directed RNA polymerase subunit OS=Candidatus Nitrosopumilus koreensis AR1 GN=NKOR_09330 PE=3 SV=1
126 : Q0W2J5_UNCMA 0.52 0.69 11 57 59 106 48 1 1 106 Q0W2J5 DNA-directed RNA polymerase subunit OS=Uncultured methanogenic archaeon RC-I GN=tfs PE=3 SV=1
127 : A2SQL6_METLZ 0.51 0.71 7 57 46 96 51 0 0 96 A2SQL6 DNA-directed RNA polymerase, subunit M OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=Mlab_0448 PE=4 SV=1
128 : A3CVC4_METMJ 0.51 0.70 5 57 52 104 53 0 0 104 A3CVC4 DNA-directed RNA polymerase subunit OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_1395 PE=3 SV=1
129 : B0DYJ3_LACBS 0.51 0.57 6 54 72 118 49 1 2 121 B0DYJ3 DNA-directed RNA polymerase subunit (Fragment) OS=Laccaria bicolor (strain S238N-H82 / ATCC MYA-4686) GN=LACBIDRAFT_240712 PE=3 SV=1
130 : H2C9Y0_9CREN 0.51 0.67 1 57 46 100 57 1 2 100 H2C9Y0 DNA-directed RNA polymerase subunit OS=Metallosphaera yellowstonensis MK1 GN=MetMK1DRAFT_00034050 PE=3 SV=1
131 : I7LNI4_METBM 0.51 0.65 7 57 54 104 51 0 0 104 I7LNI4 DNA-directed RNA polymerase subunit OS=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) GN=tfs PE=3 SV=1
132 : M0MSZ9_9EURY 0.51 0.68 9 55 37 83 47 0 0 86 M0MSZ9 Transcription factor TFIIS OS=Halococcus saccharolyticus DSM 5350 GN=C449_00340 PE=4 SV=1
133 : Q96YA8_SULTO 0.51 0.65 1 57 57 112 57 1 1 112 Q96YA8 DNA-directed RNA polymerase subunit OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=tfs PE=3 SV=1
134 : U1NQ96_9EURY 0.51 0.65 5 55 53 103 51 0 0 106 U1NQ96 DNA-directed RNA polymerase subunit OS=Halonotius sp. J07HN4 GN=J07HN4v3_01534 PE=3 SV=1
135 : A0RXH6_CENSY 0.50 0.75 1 56 49 102 56 1 2 103 A0RXH6 DNA-directed RNA polymerase subunit OS=Cenarchaeum symbiosum (strain A) GN=CENSYa_1421 PE=3 SV=1
136 : B1L5R4_KORCO 0.50 0.64 1 56 54 107 56 1 2 108 B1L5R4 DNA-directed RNA polymerase subunit OS=Korarchaeum cryptofilum (strain OPF8) GN=Kcr_1047 PE=3 SV=1
137 : H2NPI1_PONAB 0.50 0.63 12 55 38 78 46 2 7 78 H2NPI1 DNA-directed RNA polymerase subunit OS=Pongo abelii GN=POLR3K PE=3 SV=1
138 : J1L530_9EURY 0.50 0.73 6 57 53 104 52 0 0 104 J1L530 DNA-directed RNA polymerase subunit OS=Methanofollis liminatans DSM 4140 GN=Metli_1911 PE=3 SV=1
139 : M4YJI3_9EURY 0.50 0.65 5 56 41 92 52 0 0 92 M4YJI3 DNA-directed RNA polymerase, subunit M/Transcription elongation factor TFIIS OS=Thermoplasmatales archaeon BRNA1 GN=TALC_00191 PE=4 SV=1
140 : M9UAJ6_SULIS 0.50 0.64 2 57 48 101 56 1 2 101 M9UAJ6 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus LAL14/1 GN=SiL_1701 PE=3 SV=1
141 : Q6BMC8_DEBHA 0.50 0.62 10 55 67 110 48 2 6 111 Q6BMC8 DNA-directed RNA polymerase subunit OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2F06556g PE=3 SV=2
142 : T0LKA3_9EURY 0.50 0.63 4 56 40 93 54 1 1 93 T0LKA3 DNA-directed RNA polymerase subunit M OS=Thermoplasmatales archaeon I-plasma GN=AMDU3_IPLC00004G0517 PE=4 SV=1
143 : T0LTV3_9EURY 0.50 0.58 9 56 77 123 48 1 1 123 T0LTV3 DNA-directed RNA polymerase subunit OS=Thermoplasmatales archaeon E-plasma GN=AMDU2_EPLC00005G0499 PE=3 SV=1
144 : T0N122_9EURY 0.50 0.63 6 56 50 101 52 1 1 101 T0N122 DNA-directed RNA polymerase subunit OS=Thermoplasmatales archaeon Gpl GN=AMDU5_GPLC00004G0111 PE=3 SV=1
145 : U1P146_9EURY 0.50 0.61 2 55 53 104 54 1 2 107 U1P146 DNA-directed RNA polymerase subunit OS=halophilic archaeon J07HX64 GN=J07HX64_02107 PE=3 SV=1
146 : B3T3S7_9ARCH 0.49 0.69 2 56 4 58 55 0 0 59 B3T3S7 Putative transcription factor S-II (TFIIS) OS=uncultured marine crenarchaeote HF4000_ANIW133C7 GN=ALOHA_HF4000ANIW133C7ctg1g43 PE=4 SV=1
147 : B9LMI0_HALLT 0.49 0.61 5 55 55 105 51 0 0 108 B9LMI0 DNA-directed RNA polymerase subunit OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=Hlac_0970 PE=3 SV=1
148 : C3MRD3_SULIL 0.49 0.63 1 57 57 111 57 1 2 111 C3MRD3 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1951 PE=3 SV=1
149 : C3MXM2_SULIM 0.49 0.63 1 57 57 111 57 1 2 111 C3MXM2 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1811 PE=3 SV=1
150 : C3MZG8_SULIA 0.49 0.63 1 57 57 111 57 1 2 111 C3MZG8 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1929 PE=3 SV=1
151 : C3N7J0_SULIY 0.49 0.63 1 57 57 111 57 1 2 111 C3N7J0 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1928 PE=3 SV=1
152 : C3NFY6_SULIN 0.49 0.63 1 57 57 111 57 1 2 111 C3NFY6 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_0997 PE=3 SV=1
153 : C4KIP8_SULIK 0.49 0.63 1 57 57 111 57 1 2 111 C4KIP8 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1859 PE=3 SV=1
154 : C7NPX2_HALUD 0.49 0.63 5 55 53 103 51 0 0 106 C7NPX2 DNA-directed RNA polymerase subunit OS=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) GN=Huta_0231 PE=3 SV=1
155 : D0KRY3_SULS9 0.49 0.63 1 57 60 114 57 1 2 114 D0KRY3 DNA-directed RNA polymerase subunit OS=Sulfolobus solfataricus (strain 98/2) GN=Ssol_1266 PE=3 SV=1
156 : D2PDF3_SULID 0.49 0.63 1 57 57 111 57 1 2 111 D2PDF3 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain L.D.8.5 / Lassen #2) GN=LD85_2070 PE=3 SV=1
157 : D8J8B0_HALJB 0.49 0.61 7 55 52 100 49 0 0 103 D8J8B0 DNA-directed RNA polymerase subunit OS=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) GN=HacjB3_13875 PE=3 SV=1
158 : F0NII4_SULIR 0.49 0.63 1 57 57 111 57 1 2 111 F0NII4 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain REY15A) GN=SiRe_1707 PE=3 SV=1
159 : F0NRI4_SULIH 0.49 0.63 1 57 57 111 57 1 2 111 F0NRI4 DNA-directed RNA polymerase subunit OS=Sulfolobus islandicus (strain HVE10/4) GN=SiH_1787 PE=3 SV=1
160 : F7PGJ7_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 F7PGJ7 DNA-directed RNA polymerase subunit protein OS=Halorhabdus tiamatea SARL4B GN=rpoM PE=4 SV=1
161 : H2C9Q7_9CREN 0.49 0.67 1 57 46 100 57 1 2 100 H2C9Q7 DNA-directed RNA polymerase subunit OS=Metallosphaera yellowstonensis MK1 GN=MetMK1DRAFT_00033310 PE=3 SV=1
162 : L0AB18_CALLD 0.49 0.63 1 57 68 124 57 0 0 124 L0AB18 DNA-directed RNA polymerase subunit OS=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) GN=Calag_1367 PE=3 SV=1
163 : M0DIU4_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 M0DIU4 DNA-directed RNA polymerase subunit OS=Halorubrum terrestre JCM 10247 GN=C473_05140 PE=3 SV=1
164 : M0DL11_9EURY 0.49 0.61 5 55 53 103 51 0 0 106 M0DL11 DNA-directed RNA polymerase subunit OS=Halorubrum saccharovorum DSM 1137 GN=C471_15162 PE=3 SV=1
165 : M0EWL7_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 M0EWL7 DNA-directed RNA polymerase subunit OS=Halorubrum distributum JCM 10118 GN=C466_12231 PE=3 SV=1
166 : M0F074_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 M0F074 DNA-directed RNA polymerase subunit OS=Halorubrum distributum JCM 9100 GN=C465_02881 PE=3 SV=1
167 : M0MW60_9EURY 0.49 0.67 5 55 33 83 51 0 0 86 M0MW60 Transcription factor TFIIS OS=Halococcus salifodinae DSM 8989 GN=C450_18684 PE=4 SV=1
168 : M0NKM6_9EURY 0.49 0.61 5 55 55 105 51 0 0 108 M0NKM6 DNA-directed RNA polymerase subunit OS=Halorubrum kocurii JCM 14978 GN=C468_16176 PE=3 SV=1
169 : M0NYZ2_9EURY 0.49 0.61 5 55 55 105 51 0 0 108 M0NYZ2 DNA-directed RNA polymerase subunit OS=Halorubrum lipolyticum DSM 21995 GN=C469_03940 PE=3 SV=1
170 : M0P3V6_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 M0P3V6 DNA-directed RNA polymerase subunit OS=Halorubrum litoreum JCM 13561 GN=C470_01443 PE=3 SV=1
171 : M0PGM0_9EURY 0.49 0.61 5 55 53 103 51 0 0 106 M0PGM0 DNA-directed RNA polymerase subunit OS=Halorubrum aidingense JCM 13560 GN=C461_03867 PE=3 SV=1
172 : M0PQM7_9EURY 0.49 0.63 5 55 53 103 51 0 0 106 M0PQM7 DNA-directed RNA polymerase subunit OS=Halorubrum arcis JCM 13916 GN=C462_01942 PE=3 SV=1
173 : Q980K2_SULSO 0.49 0.63 1 57 60 114 57 1 2 114 Q980K2 DNA-directed RNA polymerase subunit OS=Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=rpoM-1 PE=3 SV=1
174 : R0I5V3_9BRAS 0.49 0.65 7 55 57 105 49 0 0 106 R0I5V3 DNA-directed RNA polymerase subunit OS=Capsella rubella GN=CARUB_v10014975mg PE=3 SV=1
175 : V4Y1Y1_9ARCH 0.49 0.63 5 55 55 105 51 0 0 108 V4Y1Y1 DNA-directed RNA polymerase subunit OS=uncultured archaeon A07HR67 GN=A07HR67_00322 PE=3 SV=1
176 : W1QJC5_OGAPD 0.49 0.61 9 55 67 111 49 2 6 112 W1QJC5 DNA-directed RNA polymerase subunit OS=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) GN=HPODL_05122 PE=3 SV=1
177 : W7KWW3_9CREN 0.49 0.67 1 57 56 110 57 1 2 110 W7KWW3 Transcription termination factor Tfs OS=Sulfolobales archaeon AZ1 GN=ASUL_02069 PE=4 SV=1
178 : A7I6R8_METB6 0.48 0.73 2 57 49 104 56 0 0 104 A7I6R8 DNA-directed RNA polymerase subunit OS=Methanoregula boonei (strain 6A8) GN=Mboo_0911 PE=3 SV=1
179 : B8GDN8_METPE 0.48 0.67 6 57 52 103 52 0 0 103 B8GDN8 DNA-directed RNA polymerase subunit OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=Mpal_2091 PE=3 SV=1
180 : E7QTA2_9EURY 0.48 0.66 6 55 51 100 50 0 0 103 E7QTA2 DNA-directed RNA polymerase subunit OS=Haladaptatus paucihalophilus DX253 GN=ZOD2009_10150 PE=3 SV=1
181 : Q2FPF9_METHJ 0.48 0.73 8 57 56 107 52 1 2 107 Q2FPF9 DNA-directed RNA polymerase subunit OS=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) GN=Mhun_0804 PE=3 SV=1
182 : Q2NEY4_METST 0.48 0.72 5 54 53 102 50 0 0 105 Q2NEY4 DNA-directed RNA polymerase subunit OS=Methanosphaera stadtmanae (strain ATCC 43021 / DSM 3091 / JCM 11832 / MCB-3) GN=rpoM2 PE=3 SV=1
183 : U1PLI3_9EURY 0.48 0.58 6 55 55 104 50 0 0 107 U1PLI3 DNA-directed RNA polymerase subunit OS=halophilic archaeon J07HB67 GN=J07HB67_00313 PE=3 SV=1
184 : B6HSN1_PENCW 0.47 0.60 1 53 58 110 53 0 0 124 B6HSN1 DNA-directed RNA polymerase subunit OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=Pc22g04170 PE=3 SV=1
185 : F4G032_METCR 0.47 0.68 1 57 56 110 57 1 2 110 F4G032 DNA-directed RNA polymerase subunit OS=Metallosphaera cuprina (strain Ar-4) GN=Mcup_0423 PE=3 SV=1
186 : F6YNC9_MONDO 0.47 0.63 9 55 777 825 49 1 2 825 F6YNC9 Uncharacterized protein OS=Monodelphis domestica GN=RHBDF1 PE=4 SV=2
187 : F8DBK9_HALXS 0.47 0.59 5 55 49 99 51 0 0 102 F8DBK9 DNA-directed RNA polymerase subunit OS=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) GN=Halxa_3668 PE=3 SV=1
188 : G3W776_SARHA 0.47 0.63 9 55 752 800 49 1 2 800 G3W776 Uncharacterized protein OS=Sarcophilus harrisii GN=RHBDF1 PE=4 SV=1
189 : I1N2G1_SOYBN 0.47 0.65 7 55 60 110 51 1 2 111 I1N2G1 DNA-directed RNA polymerase subunit OS=Glycine max PE=3 SV=2
190 : L0IFS2_HALRX 0.47 0.61 5 55 49 99 51 0 0 102 L0IFS2 DNA-directed RNA polymerase subunit OS=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) GN=Halru_2499 PE=3 SV=1
191 : L9XKM2_9EURY 0.47 0.57 5 55 49 99 51 0 0 102 L9XKM2 DNA-directed RNA polymerase subunit OS=Natronolimnobius innermongolicus JCM 12255 GN=C493_02653 PE=3 SV=1
192 : L9ZUM3_9EURY 0.47 0.59 5 55 49 99 51 0 0 102 L9ZUM3 DNA-directed RNA polymerase subunit OS=Natrialba taiwanensis DSM 12281 GN=C484_13375 PE=3 SV=1
193 : M0BE00_9EURY 0.47 0.61 5 55 49 99 51 0 0 102 M0BE00 DNA-directed RNA polymerase subunit OS=Halovivax asiaticus JCM 14624 GN=C479_12042 PE=3 SV=1
194 : M0CQM4_9EURY 0.47 0.59 5 55 49 99 51 0 0 102 M0CQM4 DNA-directed RNA polymerase subunit OS=Haloterrigena limicola JCM 13563 GN=C476_01595 PE=3 SV=1
195 : Q15ES4_SCHMA 0.47 0.65 5 55 64 114 51 0 0 115 Q15ES4 DNA-directed RNA polymerase subunit OS=Schistosoma mansoni GN=Smp_034100 PE=3 SV=1
196 : A4YHU8_METS5 0.46 0.67 1 57 56 110 57 1 2 110 A4YHU8 DNA-directed RNA polymerase subunit OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_1860 PE=3 SV=1
197 : D5E9S0_METMS 0.46 0.67 1 57 51 104 57 1 3 104 D5E9S0 DNA-directed RNA polymerase subunit OS=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) GN=Mmah_0389 PE=3 SV=1
198 : D7E957_METEZ 0.46 0.65 1 57 50 103 57 1 3 103 D7E957 DNA-directed RNA polymerase subunit OS=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) GN=Metev_1123 PE=3 SV=1
199 : J3LFS4_ORYBR 0.46 0.62 11 55 62 109 48 2 3 110 J3LFS4 DNA-directed RNA polymerase subunit OS=Oryza brachyantha GN=OB02G34910 PE=3 SV=1
200 : K4MF30_9EURY 0.46 0.68 1 57 53 106 57 1 3 106 K4MF30 DNA-directed RNA polymerase subunit OS=Methanolobus psychrophilus R15 GN=Mpsy_2331 PE=3 SV=1
201 : L0KXK5_METHD 0.46 0.68 1 57 51 104 57 1 3 104 L0KXK5 DNA-directed RNA polymerase subunit OS=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) GN=Metho_0457 PE=3 SV=1
202 : M0M306_9EURY 0.46 0.61 2 55 50 103 54 0 0 106 M0M306 DNA-directed RNA polymerase subunit OS=Halococcus hamelinensis 100A6 GN=C447_08183 PE=3 SV=1
203 : M0MZV7_9EURY 0.46 0.61 2 55 50 103 54 0 0 106 M0MZV7 DNA-directed RNA polymerase subunit OS=Halococcus thailandensis JCM 13552 GN=C451_17760 PE=3 SV=1
204 : Q9YEZ3_AERPE 0.46 0.63 1 57 63 118 57 1 1 118 Q9YEZ3 DNA-directed RNA polymerase subunit OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=tfs PE=3 SV=2
205 : T1BC69_9ZZZZ 0.46 0.62 6 56 42 93 52 1 1 93 T1BC69 DNA-directed RNA polymerase subunit M OS=mine drainage metagenome GN=B1A_07705 PE=4 SV=1
206 : U2YXZ2_9EURY 0.46 0.60 1 57 50 106 57 0 0 106 U2YXZ2 DNA-directed RNA polymerase subunit OS=Halarchaeum acidiphilum MH1-52-1 GN=MBE-HAL_2437 PE=3 SV=1
207 : V7B3A5_PHAVU 0.46 0.65 6 55 59 110 52 1 2 111 V7B3A5 DNA-directed RNA polymerase subunit OS=Phaseolus vulgaris GN=PHAVU_008G101000g PE=3 SV=1
208 : A2EBM6_TRIVA 0.45 0.73 6 55 58 108 51 1 1 109 A2EBM6 DNA-directed RNA polymerase subunit OS=Trichomonas vaginalis GN=TVAG_482170 PE=3 SV=1
209 : L0JQX0_NATP1 0.45 0.57 5 55 49 99 51 0 0 102 L0JQX0 DNA-directed RNA polymerase subunit OS=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) GN=Natpe_3232 PE=3 SV=1
210 : M0BP06_9EURY 0.45 0.57 5 55 49 99 51 0 0 102 M0BP06 DNA-directed RNA polymerase subunit OS=Haloterrigena thermotolerans DSM 11522 GN=C478_13165 PE=3 SV=1
211 : M1HXL7_9PHYC 0.45 0.61 7 55 132 180 49 0 0 180 M1HXL7 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus KS1B GN=KS1B_076L PE=4 SV=1
212 : Q5DC18_SCHJA 0.45 0.63 5 55 64 114 51 0 0 115 Q5DC18 DNA-directed RNA polymerase subunit OS=Schistosoma japonicum GN=Y77E11A.6 PE=3 SV=1
213 : T0ZDD0_9ZZZZ 0.45 0.66 2 57 47 102 56 0 0 102 T0ZDD0 Transcription termination factor Tfs OS=mine drainage metagenome GN=B1B_12741 PE=4 SV=1
214 : U3A742_9EURY 0.45 0.63 5 55 42 92 51 0 0 95 U3A742 Transcription factor S OS=Halarchaeum acidiphilum MH1-52-1 GN=MBE-HAL_2244 PE=4 SV=1
215 : A8BI36_GIAIC 0.44 0.60 1 54 290 344 55 1 1 346 A8BI36 Transcription factor TFIIS OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6) GN=GL50803_5158 PE=4 SV=1
216 : B3L0T6_PLAKH 0.44 0.65 2 55 53 106 54 0 0 106 B3L0T6 DNA-directed RNA polymerase subunit OS=Plasmodium knowlesi (strain H) GN=PKH_041330 PE=3 SV=1
217 : C6LSC0_GIAIB 0.44 0.60 1 54 290 344 55 1 1 346 C6LSC0 Transcription factor TFIIS OS=Giardia intestinalis (strain ATCC 50581 / GS clone H7) GN=GL50581_1657 PE=4 SV=1
218 : C7P2H7_HALMD 0.44 0.56 2 55 50 104 55 1 1 107 C7P2H7 DNA-directed RNA polymerase subunit OS=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) GN=Hmuk_3187 PE=3 SV=1
219 : D3DYV3_METRM 0.44 0.65 7 57 80 131 52 1 1 131 D3DYV3 DNA-directed RNA polymerase subunit OS=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) GN=tfs2 PE=3 SV=1
220 : E1EZG2_GIAIA 0.44 0.60 1 54 290 344 55 1 1 346 E1EZG2 Transcription factor TFIIS OS=Giardia intestinalis (strain P15) GN=GLP15_914 PE=4 SV=1
221 : K5VCC9_PHACS 0.44 0.61 1 54 71 124 54 0 0 127 K5VCC9 DNA-directed RNA polymerase subunit OS=Phanerochaete carnosa (strain HHB-10118-sp) GN=PHACADRAFT_179818 PE=3 SV=1
222 : K6UIJ2_9APIC 0.44 0.65 2 55 53 106 54 0 0 106 K6UIJ2 DNA-directed RNA polymerase subunit OS=Plasmodium cynomolgi strain B GN=PCYB_042370 PE=3 SV=1
223 : M0AJA6_NATA1 0.44 0.56 1 55 45 99 55 0 0 102 M0AJA6 DNA-directed RNA polymerase subunit OS=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) GN=C481_16752 PE=3 SV=1
224 : M0M978_HALMO 0.44 0.61 2 55 50 103 54 0 0 106 M0M978 DNA-directed RNA polymerase subunit OS=Halococcus morrhuae DSM 1307 GN=C448_11211 PE=3 SV=1
225 : M4CR21_BRARP 0.44 0.61 2 55 49 102 54 0 0 103 M4CR21 DNA-directed RNA polymerase subunit OS=Brassica rapa subsp. pekinensis GN=BRA006662 PE=3 SV=1
226 : N1PH15_MYCP1 0.44 0.55 1 55 66 120 55 0 0 122 N1PH15 DNA-directed RNA polymerase subunit OS=Mycosphaerella pini (strain NZE10 / CBS 128990) GN=DOTSEDRAFT_137176 PE=3 SV=1
227 : O96159_PLAF7 0.44 0.63 2 55 53 106 54 0 0 106 O96159 DNA-directed RNA polymerase subunit OS=Plasmodium falciparum (isolate 3D7) GN=PFB0290c PE=3 SV=1
228 : R4W8U6_9EURY 0.44 0.55 2 55 50 104 55 1 1 107 R4W8U6 DNA-directed RNA polymerase subunit OS=Salinarchaeum sp. Harcht-Bsk1 GN=L593_10765 PE=3 SV=1
229 : R7S2F7_PUNST 0.44 0.57 1 54 70 123 54 0 0 126 R7S2F7 DNA-directed RNA polymerase subunit OS=Punctularia strigosozonata (strain HHB-11173) GN=PUNSTDRAFT_108527 PE=3 SV=1
230 : U1NC93_9EURY 0.44 0.59 2 55 50 103 54 0 0 106 U1NC93 DNA-directed RNA polymerase subunit OS=Halonotius sp. J07HN6 GN=J07HN6_02464 PE=3 SV=1
231 : U3TCM8_9CREN 0.44 0.63 1 57 65 120 57 1 1 120 U3TCM8 DNA-directed RNA polymerase subunit OS=Aeropyrum camini SY1 = JCM 12091 GN=tfs PE=3 SV=1
232 : V2X8Q4_MONRO 0.44 0.60 5 54 77 124 50 1 2 127 V2X8Q4 DNA-directed RNA polymerase subunit OS=Moniliophthora roreri (strain MCA 2997) GN=Moror_12652 PE=3 SV=1
233 : V4XII2_9ARCH 0.44 0.59 2 55 50 103 54 0 0 106 V4XII2 DNA-directed RNA polymerase subunit OS=uncultured archaeon A07HN63 GN=A07HN63_02082 PE=3 SV=1
234 : V6TDV7_GIAIN 0.44 0.60 1 54 290 344 55 1 1 346 V6TDV7 Transcription factor S-II-related protein OS=Giardia intestinalis GN=DHA2_154594 PE=4 SV=1
235 : V6U280_GIAIN 0.44 0.60 1 54 290 344 55 1 1 346 V6U280 Transcription factor S-II-related protein OS=Giardia intestinalis GN=GSB_150550 PE=4 SV=1
236 : W4INS1_PLAFA 0.44 0.63 2 55 53 106 54 0 0 106 W4INS1 DNA-directed RNA polymerase subunit OS=Plasmodium falciparum NF135/5.C10 GN=PFNF135_00232 PE=3 SV=1
237 : W7FDM9_PLAF8 0.44 0.63 2 55 53 106 54 0 0 106 W7FDM9 Transcription factor S OS=Plasmodium falciparum (isolate 7G8) GN=PFBG_00669 PE=4 SV=1
238 : W7JJL5_PLAFA 0.44 0.63 2 55 53 106 54 0 0 106 W7JJL5 Transcription factor S OS=Plasmodium falciparum UGT5.1 GN=C923_00229 PE=4 SV=1
239 : A5KBL4_PLAVS 0.43 0.65 2 55 53 106 54 0 0 106 A5KBL4 DNA-directed RNA polymerase subunit OS=Plasmodium vivax (strain Salvador I) GN=PVX_003760 PE=3 SV=1
240 : A9CS23_ENTBH 0.43 0.63 2 52 48 97 51 1 1 102 A9CS23 DNA-directed RNA polymerase subunit OS=Enterocytozoon bieneusi (strain H348) GN=EBI_25540 PE=3 SV=1
241 : B0R3C1_HALS3 0.43 0.59 2 55 48 101 54 0 0 104 B0R3C1 DNA-directed RNA polymerase subunit OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tfs1 PE=3 SV=1
242 : C5Y1A6_SORBI 0.43 0.67 7 55 115 165 51 1 2 166 C5Y1A6 Putative uncharacterized protein Sb04g032090 OS=Sorghum bicolor GN=Sb04g032090 PE=4 SV=1
243 : D2EEV0_9ARCH 0.43 0.64 5 56 27 79 53 1 1 80 D2EEV0 Transcription factor TFIIS OS=Candidatus Parvarchaeum acidiphilum ARMAN-4 GN=BJBARM4_0253 PE=4 SV=1
244 : E4UU29_ARTGP 0.43 0.63 2 52 63 110 51 1 3 110 E4UU29 DNA-directed RNA polymerase subunit OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) GN=MGYG_04622 PE=3 SV=1
245 : F7BFC7_ORNAN 0.43 0.61 7 55 25 72 51 2 5 72 F7BFC7 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=POLR3K PE=4 SV=1
246 : G0QCG2_9ARCH 0.43 0.59 5 57 45 98 54 1 1 98 G0QCG2 DNA-directed RNA polymerase, subunit M/transcription elongation factor TFIIS OS=Candidatus Nanosalinarum sp. J07AB56 GN=J07AB56_06880 PE=4 SV=1
247 : I7IQM5_BABMI 0.43 0.59 1 55 57 112 56 1 1 112 I7IQM5 DNA-directed RNA polymerase subunit OS=Babesia microti strain RI GN=BBM_II03800 PE=3 SV=1
248 : K0KGM8_WICCF 0.43 0.56 2 55 62 110 54 1 5 111 K0KGM8 DNA-directed RNA polymerase subunit OS=Wickerhamomyces ciferrii (strain F-60-10 / ATCC 14091 / CBS 111 / JCM 3599 / NBRC 0793 / NRRL Y-1031) GN=BN7_3867 PE=3 SV=1
249 : M0ADL0_9EURY 0.43 0.64 1 57 50 107 58 1 1 107 M0ADL0 DNA-directed RNA polymerase subunit OS=Natrialba taiwanensis DSM 12281 GN=C484_03119 PE=3 SV=1
250 : M0AX92_NATA1 0.43 0.62 1 57 50 107 58 1 1 107 M0AX92 DNA-directed RNA polymerase subunit OS=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) GN=C481_07971 PE=3 SV=1
251 : M0AYM2_9EURY 0.43 0.64 1 57 50 107 58 1 1 107 M0AYM2 DNA-directed RNA polymerase subunit OS=Natrialba aegyptia DSM 13077 GN=C480_14610 PE=3 SV=1
252 : M0M5B6_9EURY 0.43 0.59 1 56 53 105 56 1 3 106 M0M5B6 DNA-directed RNA polymerase subunit OS=Halococcus hamelinensis 100A6 GN=C447_06216 PE=3 SV=1
253 : M0MF59_9EURY 0.43 0.61 1 56 50 105 56 0 0 106 M0MF59 DNA-directed RNA polymerase subunit OS=Halococcus saccharolyticus DSM 5350 GN=C449_10638 PE=3 SV=1
254 : M0N6C7_9EURY 0.43 0.59 1 56 50 105 56 0 0 106 M0N6C7 DNA-directed RNA polymerase subunit OS=Halococcus salifodinae DSM 8989 GN=C450_09202 PE=3 SV=1
255 : M1HMM0_9PHYC 0.43 0.59 7 55 132 180 49 0 0 180 M1HMM0 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus CviKI GN=CviKI_135L PE=4 SV=1
256 : M1HRX6_9PHYC 0.43 0.59 7 55 132 180 49 0 0 180 M1HRX6 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus CvsA1 GN=CvsA1_142L PE=4 SV=1
257 : M1I9M6_9PHYC 0.43 0.59 7 55 132 180 49 0 0 180 M1I9M6 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus MA-1E GN=MA-1E_142L PE=4 SV=1
258 : M1Y4W9_NATM8 0.43 0.60 1 57 50 107 58 1 1 107 M1Y4W9 DNA-directed RNA polymerase subunit OS=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) GN=tfs2 PE=3 SV=1
259 : N1QG35_SPHMS 0.43 0.65 6 54 263 310 49 1 1 312 N1QG35 Transcription elongation factor S-II OS=Sphaerulina musiva (strain SO2202) GN=SEPMUDRAFT_90115 PE=4 SV=1
260 : Q22CT1_TETTS 0.43 0.57 1 53 79 132 54 1 1 136 Q22CT1 DNA-directed RNA polymerase subunit OS=Tetrahymena thermophila (strain SB210) GN=TTHERM_01016100 PE=3 SV=1
261 : Q6L0M3_PICTO 0.43 0.62 5 56 49 101 53 1 1 101 Q6L0M3 DNA-directed RNA polymerase subunit OS=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=PTO0894 PE=3 SV=1
262 : Q74N12_NANEQ 0.43 0.62 1 57 49 106 58 1 1 106 Q74N12 DNA-directed RNA polymerase subunit OS=Nanoarchaeum equitans (strain Kin4-M) GN=NEQ377 PE=3 SV=1
263 : Q84444_PBCV1 0.43 0.59 7 55 132 180 49 0 0 180 Q84444 Uncharacterized protein OS=Paramecium bursaria Chlorella virus 1 GN=A125L PE=4 SV=1
264 : Q9HS34_HALSA 0.43 0.59 2 55 48 101 54 0 0 104 Q9HS34 DNA-directed RNA polymerase subunit OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=rpoM PE=3 SV=1
265 : Q9YPH8_9PHYC 0.43 0.59 7 55 132 180 49 0 0 180 Q9YPH8 Transcription elongation factor SII OS=Chlorella virus GN=TFIIS PE=4 SV=1
266 : S0APM0_FERAC 0.43 0.59 7 56 51 101 51 1 1 101 S0APM0 DNA-directed RNA polymerase subunit OS=Ferroplasma acidarmanus fer1 GN=FACI_IFERC00001G0169 PE=3 SV=1
267 : S7S1V5_GLOTA 0.43 0.61 1 54 72 125 54 0 0 128 S7S1V5 DNA-directed RNA polymerase subunit OS=Gloeophyllum trabeum (strain ATCC 11539 / FP-39264 / Madison 617) GN=GLOTRDRAFT_124895 PE=3 SV=1
268 : T0M0P6_9EURY 0.43 0.59 7 56 42 92 51 1 1 92 T0M0P6 Uncharacterized protein OS=Ferroplasma sp. Type II GN=AMDU4_FER2C00054G0020 PE=4 SV=1
269 : W0K261_9EURY 0.43 0.56 2 55 48 101 54 0 0 104 W0K261 DNA-directed RNA polymerase subunit OS=Halobacterium sp. DL1 GN=HALDL1_06310 PE=3 SV=1
270 : W7A0X4_9APIC 0.43 0.65 2 55 53 106 54 0 0 106 W7A0X4 DNA-directed RNA polymerase III subunit RPC10 OS=Plasmodium inui San Antonio 1 GN=C922_02832 PE=4 SV=1
271 : D2RPX2_HALTV 0.42 0.53 1 55 45 99 55 0 0 102 D2RPX2 DNA-directed RNA polymerase subunit OS=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) GN=Htur_1343 PE=3 SV=1
272 : D4GXU9_HALVD 0.42 0.58 5 55 52 103 52 1 1 106 D4GXU9 DNA-directed RNA polymerase subunit OS=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) GN=rpoM1 PE=3 SV=1
273 : G0HWP0_HALHT 0.42 0.53 2 55 42 96 55 1 1 99 G0HWP0 DNA-directed RNA polymerase subunit M OS=Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755) GN=rpoM1 PE=4 SV=1
274 : G0QMJ9_ICHMG 0.42 0.62 2 55 284 338 55 1 1 340 G0QMJ9 RNA polymerase i subunit, putative OS=Ichthyophthirius multifiliis (strain G5) GN=IMG5_049410 PE=4 SV=1
275 : G7YUK2_CLOSI 0.42 0.63 4 55 711 762 52 0 0 763 G7YUK2 DNA-directed RNA polymerase III subunit RPC10 OS=Clonorchis sinensis GN=CLF_111268 PE=4 SV=1
276 : I0Z8Q6_9CHLO 0.42 0.60 1 50 71 120 50 0 0 120 I0Z8Q6 DNA-directed RNA polymerase subunit OS=Coccomyxa subellipsoidea C-169 GN=COCSUDRAFT_83584 PE=3 SV=1
277 : J9KKF8_ACYPI 0.42 0.68 6 55 28 74 50 1 3 74 J9KKF8 Uncharacterized protein OS=Acyrthosiphon pisum PE=4 SV=1
278 : K3YWX1_SETIT 0.42 0.62 11 55 62 109 48 2 3 110 K3YWX1 DNA-directed RNA polymerase subunit OS=Setaria italica GN=Si018767m.g PE=3 SV=1
279 : L0AE72_NATGS 0.42 0.55 1 55 45 99 55 0 0 102 L0AE72 DNA-directed RNA polymerase subunit OS=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) GN=Natgr_0972 PE=3 SV=1
280 : L1IQC7_GUITH 0.42 0.58 2 54 37 89 53 0 0 92 L1IQC7 DNA-directed RNA polymerase I subunit, RPA12 OS=Guillardia theta CCMP2712 GN=GUITHDRAFT_175431 PE=4 SV=1
281 : L9W2X9_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 L9W2X9 DNA-directed RNA polymerase subunit OS=Natronorubrum sulfidifaciens JCM 14089 GN=C495_12834 PE=3 SV=1
282 : L9WQ07_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 L9WQ07 DNA-directed RNA polymerase subunit OS=Natronococcus jeotgali DSM 18795 GN=C492_20700 PE=3 SV=1
283 : L9YKX4_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 L9YKX4 DNA-directed RNA polymerase subunit OS=Natrinema pallidum DSM 3751 GN=C487_14059 PE=3 SV=1
284 : L9YW38_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 L9YW38 DNA-directed RNA polymerase subunit OS=Natrinema gari JCM 14663 GN=C486_14739 PE=3 SV=1
285 : L9ZW16_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 L9ZW16 DNA-directed RNA polymerase subunit OS=Natrinema altunense JCM 12890 GN=C485_02943 PE=3 SV=1
286 : M0A5K9_9EURY 0.42 0.55 1 55 45 99 55 0 0 102 M0A5K9 DNA-directed RNA polymerase subunit OS=Natrialba chahannaoensis JCM 10990 GN=C482_19526 PE=3 SV=1
287 : M0BQA2_9EURY 0.42 0.53 1 55 45 99 55 0 0 102 M0BQA2 DNA-directed RNA polymerase subunit OS=Haloterrigena salina JCM 13891 GN=C477_21665 PE=3 SV=1
288 : M0CJC4_9EURY 0.42 0.53 2 55 42 96 55 1 1 99 M0CJC4 DNA-directed RNA polymerase subunit M OS=Halosimplex carlsbadense 2-9-1 GN=C475_16566 PE=4 SV=1
289 : M0CS49_9EURY 0.42 0.56 5 55 53 104 52 1 1 107 M0CS49 DNA-directed RNA polymerase subunit OS=Halosarcina pallida JCM 14848 GN=C474_20306 PE=3 SV=1
290 : M0GG85_9EURY 0.42 0.58 5 55 52 103 52 1 1 106 M0GG85 DNA-directed RNA polymerase subunit OS=Haloferax sp. ATCC BAA-644 GN=C458_06304 PE=3 SV=1
291 : M0JH16_HALVA 0.42 0.53 2 55 42 96 55 1 1 99 M0JH16 DNA-directed RNA polymerase subunit M OS=Haloarcula vallismortis ATCC 29715 GN=C437_09363 PE=4 SV=1
292 : M0JYX3_9EURY 0.42 0.53 2 55 42 96 55 1 1 99 M0JYX3 DNA-directed RNA-polymerase subunit M OS=Haloarcula sinaiiensis ATCC 33800 GN=C436_12043 PE=4 SV=1
293 : M0KKL2_9EURY 0.42 0.53 2 55 42 96 55 1 1 99 M0KKL2 DNA-directed RNA polymerase subunit M OS=Haloarcula amylolytica JCM 13557 GN=C442_10436 PE=4 SV=1
294 : M0KLE1_9EURY 0.42 0.53 2 55 42 96 55 1 1 99 M0KLE1 DNA-directed RNA-polymerase subunit M OS=Haloarcula californiae ATCC 33799 GN=C435_05023 PE=4 SV=1
295 : M0KRP4_HALAR 0.42 0.53 2 55 51 105 55 1 1 108 M0KRP4 DNA-directed RNA polymerase subunit OS=Haloarcula argentinensis DSM 12282 GN=C443_08013 PE=3 SV=1
296 : M0L9N0_HALJP 0.42 0.53 2 55 42 96 55 1 1 99 M0L9N0 DNA-directed RNA polymerase subunit M OS=Haloarcula japonica DSM 6131 GN=C444_13402 PE=4 SV=1
297 : M0LID9_9EURY 0.42 0.55 1 55 45 99 55 0 0 102 M0LID9 DNA-directed RNA polymerase subunit OS=Halobiforma lacisalsi AJ5 GN=C445_13160 PE=3 SV=1
298 : M0LYA1_9EURY 0.42 0.55 1 55 45 99 55 0 0 102 M0LYA1 DNA-directed RNA polymerase subunit OS=Halobiforma nitratireducens JCM 10879 GN=C446_10040 PE=3 SV=1
299 : Q5V5C5_HALMA 0.42 0.53 2 55 51 105 55 1 1 108 Q5V5C5 DNA-directed RNA polymerase subunit OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpoM PE=3 SV=1
300 : U5DAJ6_AMBTC 0.42 0.62 6 55 58 109 52 1 2 110 U5DAJ6 DNA-directed RNA polymerase subunit OS=Amborella trichopoda GN=AMTR_s00061p00206400 PE=3 SV=1
301 : V5TL21_HALHI 0.42 0.53 2 55 51 105 55 1 1 108 V5TL21 DNA-directed RNA polymerase subunit OS=Haloarcula hispanica N601 GN=HISP_04960 PE=3 SV=1
302 : W0K4S0_9EURY 0.42 0.60 1 57 48 104 57 0 0 104 W0K4S0 DNA-directed RNA polymerase subunit OS=Halobacterium sp. DL1 GN=HALDL1_13560 PE=3 SV=1
303 : W4JZP1_9HOMO 0.42 0.54 5 54 70 118 50 1 1 121 W4JZP1 DNA-directed RNA polymerase subunit OS=Heterobasidion irregulare TC 32-1 GN=HETIRDRAFT_157860 PE=3 SV=1
304 : A7RAX1_PBCVA 0.41 0.59 7 55 132 180 49 0 0 180 A7RAX1 Putative uncharacterized protein C167L OS=Paramecium bursaria Chlorella virus AR158 GN=C167L PE=4 SV=1
305 : A9V8U5_MONBE 0.41 0.51 5 55 241 286 51 1 5 286 A9V8U5 Predicted protein OS=Monosiga brevicollis GN=38572 PE=4 SV=1
306 : B4FDM3_MAIZE 0.41 0.64 2 55 54 109 56 1 2 110 B4FDM3 DNA-directed RNA polymerase subunit OS=Zea mays GN=ZEAMMB73_646152 PE=3 SV=1
307 : C0NUV3_AJECG 0.41 0.55 7 55 71 116 51 2 7 117 C0NUV3 DNA-directed RNA polymerase subunit OS=Ajellomyces capsulatus (strain G186AR / H82 / ATCC MYA-2454 / RMSCC 2432) GN=HCBG_06717 PE=3 SV=1
308 : C6HRH0_AJECH 0.41 0.55 7 55 71 116 51 2 7 117 C6HRH0 DNA-directed RNA polymerase subunit OS=Ajellomyces capsulatus (strain H143) GN=HCDG_08555 PE=3 SV=1
309 : F0U7L8_AJEC8 0.41 0.55 7 55 71 116 51 2 7 117 F0U7L8 DNA-directed RNA polymerase subunit OS=Ajellomyces capsulatus (strain H88) GN=HCEG_00157 PE=3 SV=1
310 : I1KJX9_SOYBN 0.41 0.60 1 55 53 110 58 2 3 111 I1KJX9 DNA-directed RNA polymerase subunit OS=Glycine max PE=3 SV=1
311 : L0AEW3_NATGS 0.41 0.62 1 57 52 109 58 1 1 109 L0AEW3 DNA-directed RNA polymerase subunit OS=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) GN=Natgr_0401 PE=3 SV=1
312 : L9XRX3_9EURY 0.41 0.59 1 57 52 109 58 1 1 109 L9XRX3 DNA-directed RNA polymerase subunit OS=Natrinema versiforme JCM 10478 GN=C489_17289 PE=3 SV=1
313 : M0LFT8_9EURY 0.41 0.62 1 57 52 109 58 1 1 109 M0LFT8 DNA-directed RNA polymerase subunit OS=Halobiforma lacisalsi AJ5 GN=C445_10037 PE=3 SV=1
314 : M0LH97_9EURY 0.41 0.64 1 57 52 109 58 1 1 109 M0LH97 DNA-directed RNA polymerase subunit OS=Halobiforma nitratireducens JCM 10879 GN=C446_15423 PE=3 SV=1
315 : M2RRJ5_CERS8 0.41 0.54 1 54 70 123 54 0 0 126 M2RRJ5 DNA-directed RNA polymerase subunit OS=Ceriporiopsis subvermispora (strain B) GN=CERSUDRAFT_61506 PE=3 SV=1
316 : Q3IMU6_NATPD 0.41 0.57 1 57 50 107 58 1 1 107 Q3IMU6 DNA-directed RNA polymerase subunit OS=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) GN=tfs2 PE=3 SV=1
317 : Q9LNK0_ARATH 0.41 0.59 1 55 50 105 56 1 1 106 Q9LNK0 DNA-directed RNA polymerase subunit OS=Arabidopsis thaliana GN=F6F3.2 PE=3 SV=1
318 : S8FDS4_FOMPI 0.41 0.59 1 54 70 123 54 0 0 126 S8FDS4 DNA-directed RNA polymerase subunit OS=Fomitopsis pinicola (strain FP-58527) GN=FOMPIDRAFT_160941 PE=3 SV=1
319 : T5C2E7_AJEDE 0.41 0.55 7 55 71 116 51 2 7 117 T5C2E7 DNA-directed RNA polymerase subunit OS=Ajellomyces dermatitidis ATCC 26199 GN=BDFG_02182 PE=3 SV=1
320 : A9JLD4_ASFPB 0.40 0.51 1 53 193 241 53 1 4 243 A9JLD4 Transcription factor SII homolog OS=African swine fever virus (isolate Pig/Benin/Ben 97-1/1997) GN=I243L PE=4 SV=1
321 : A9JM71_ASFPP 0.40 0.51 1 53 193 241 53 1 4 243 A9JM71 Transcription factor SII homolog OS=African swine fever virus (isolate Pig/Portugal/OURT88/1988) GN=I243L PE=4 SV=1
322 : B0WS60_CULQU 0.40 0.54 5 52 77 124 48 0 0 129 B0WS60 DNA-directed RNA polymerase subunit OS=Culex quinquefasciatus GN=CpipJ_CPIJ009821 PE=3 SV=1
323 : B9LQF5_HALLT 0.40 0.60 1 57 52 109 58 1 1 109 B9LQF5 DNA-directed RNA polymerase subunit OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=Hlac_1998 PE=3 SV=1
324 : C5FUC4_ARTOC 0.40 0.62 1 55 62 113 55 1 3 115 C5FUC4 DNA-directed RNA polymerase subunit OS=Arthroderma otae (strain ATCC MYA-4605 / CBS 113480) GN=MCYG_06327 PE=3 SV=1
325 : C6T364_SOYBN 0.40 0.59 1 55 53 110 58 2 3 111 C6T364 DNA-directed RNA polymerase subunit OS=Glycine max PE=3 SV=1
326 : D2RTN7_HALTV 0.40 0.62 1 57 52 109 58 1 1 109 D2RTN7 DNA-directed RNA polymerase subunit OS=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) GN=Htur_2105 PE=3 SV=1
327 : D3SYV3_NATMM 0.40 0.62 1 57 50 107 58 1 1 107 D3SYV3 DNA-directed RNA polymerase subunit OS=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) GN=Nmag_0628 PE=3 SV=1
328 : D3SZP8_NATMM 0.40 0.55 1 55 45 99 55 0 0 102 D3SZP8 DNA-directed RNA polymerase subunit OS=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) GN=Nmag_2752 PE=3 SV=1
329 : D4I5G2_ASF 0.40 0.51 1 53 193 241 53 1 4 243 D4I5G2 BA71V-I243L (K9L) protein OS=African swine fever virus E75 GN=BA71V-I243L (k9L) PE=4 SV=1
330 : D7KQA1_ARALL 0.40 0.55 1 55 56 105 55 1 5 106 D7KQA1 DNA-directed RNA polymerase subunit OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_311313 PE=3 SV=1
331 : E0WM88_ASF 0.40 0.51 1 53 193 241 53 1 4 243 E0WM88 I243L OS=African swine fever virus Georgia 2007/1 GN=I243L PE=4 SV=1
332 : F2U4I6_SALR5 0.40 0.55 1 55 220 269 55 1 5 269 F2U4I6 Putative uncharacterized protein OS=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) GN=PTSG_03204 PE=4 SV=1
333 : F8D353_HALXS 0.40 0.60 1 57 50 107 58 1 1 107 F8D353 DNA-directed RNA polymerase subunit OS=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) GN=Halxa_2726 PE=3 SV=1
334 : L0ICW0_HALRX 0.40 0.64 1 57 50 107 58 1 1 107 L0ICW0 DNA-directed RNA polymerase subunit OS=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) GN=Halru_2010 PE=3 SV=1
335 : L0K4K6_9EURY 0.40 0.60 1 57 50 107 58 1 1 107 L0K4K6 DNA-directed RNA polymerase subunit OS=Natronococcus occultus SP4 GN=Natoc_3774 PE=3 SV=1
336 : L9VK62_9EURY 0.40 0.55 1 55 45 99 55 0 0 102 L9VK62 DNA-directed RNA polymerase subunit OS=Natronorubrum tibetense GA33 GN=C496_20300 PE=3 SV=1
337 : L9VYG6_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 L9VYG6 DNA-directed RNA polymerase subunit OS=Natronorubrum sulfidifaciens JCM 14089 GN=C495_15788 PE=3 SV=1
338 : L9W190_9EURY 0.40 0.51 1 55 45 99 55 0 0 102 L9W190 DNA-directed RNA polymerase subunit OS=Natronorubrum bangense JCM 10635 GN=C494_18922 PE=3 SV=1
339 : L9W3D4_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 L9W3D4 DNA-directed RNA polymerase subunit OS=Natronorubrum bangense JCM 10635 GN=C494_17683 PE=3 SV=1
340 : L9W8X4_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 L9W8X4 DNA-directed RNA polymerase subunit OS=Natronorubrum tibetense GA33 GN=C496_02202 PE=3 SV=1
341 : L9WIK8_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 L9WIK8 DNA-directed RNA polymerase subunit OS=Natronolimnobius innermongolicus JCM 12255 GN=C493_20987 PE=3 SV=1
342 : L9WWQ8_9EURY 0.40 0.60 1 57 50 107 58 1 1 107 L9WWQ8 DNA-directed RNA polymerase subunit OS=Natronococcus amylolyticus DSM 10524 GN=C491_20552 PE=3 SV=1
343 : L9XY32_9EURY 0.40 0.60 1 57 50 107 58 1 1 107 L9XY32 DNA-directed RNA polymerase subunit OS=Natronococcus jeotgali DSM 18795 GN=C492_00719 PE=3 SV=1
344 : L9ZV60_9EURY 0.40 0.55 1 55 45 99 55 0 0 102 L9ZV60 DNA-directed RNA polymerase subunit OS=Natrialba hulunbeirensis JCM 10989 GN=C483_13795 PE=3 SV=1
345 : M0A6F1_9EURY 0.40 0.62 1 57 50 107 58 1 1 107 M0A6F1 DNA-directed RNA polymerase subunit OS=Natrialba hulunbeirensis JCM 10989 GN=C483_03155 PE=3 SV=1
346 : M0AUU0_9EURY 0.40 0.62 1 57 50 107 58 1 1 107 M0AUU0 DNA-directed RNA polymerase subunit OS=Natrialba chahannaoensis JCM 10990 GN=C482_08046 PE=3 SV=1
347 : M0BCC0_9EURY 0.40 0.64 1 57 50 107 58 1 1 107 M0BCC0 DNA-directed RNA polymerase subunit OS=Halovivax asiaticus JCM 14624 GN=C479_14418 PE=3 SV=1
348 : M0C5P1_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 M0C5P1 DNA-directed RNA polymerase subunit OS=Haloterrigena salina JCM 13891 GN=C477_13550 PE=3 SV=1
349 : M0CER0_9EURY 0.40 0.62 1 57 52 109 58 1 1 109 M0CER0 DNA-directed RNA polymerase subunit OS=Haloterrigena limicola JCM 13563 GN=C476_10731 PE=3 SV=1
350 : M0J6E3_HALMT 0.40 0.54 7 55 44 93 50 1 1 96 M0J6E3 DNA-directed RNA polymerase subunit M1 OS=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) GN=C439_03183 PE=4 SV=1
351 : M1XTJ3_NATM8 0.40 0.55 2 55 51 105 55 1 1 108 M1XTJ3 DNA-directed RNA polymerase subunit OS=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) GN=tfs1 PE=3 SV=1
352 : M2LLM9_BAUCO 0.40 0.64 5 54 261 309 50 1 1 311 M2LLM9 Uncharacterized protein OS=Baudoinia compniacensis (strain UAMH 10762) GN=BAUCODRAFT_530419 PE=4 SV=1
353 : Q65252_ASF 0.40 0.51 1 53 193 241 53 1 4 243 Q65252 Transcription factor SII OS=African swine fever virus PE=4 SV=1
354 : Q8LE40_ARATH 0.40 0.53 1 55 56 105 55 1 5 106 Q8LE40 DNA-directed RNA polymerase subunit OS=Arabidopsis thaliana PE=3 SV=1
355 : Q9ZQC0_ARATH 0.40 0.53 1 55 56 105 55 1 5 106 Q9ZQC0 DNA-directed RNA polymerase subunit OS=Arabidopsis thaliana GN=F1K3.2 PE=3 SV=1
356 : TFS2_ASFB7 0.40 0.51 1 53 193 241 53 1 4 243 P27948 Transcription factor S-II-related protein OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=BA71V-140 PE=2 SV=1
357 : TFS2_ASFM2 0.40 0.51 1 53 193 241 53 1 4 243 P0C8F6 Transcription factor S-II-related protein OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=Mal-147 PE=2 SV=1
358 : TFS2_ASFP4 0.40 0.51 1 53 193 241 53 1 4 243 P0C8F7 Transcription factor S-II-related protein OS=African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996) GN=Pret-152 PE=2 SV=1
359 : TFS2_ASFWA 0.40 0.51 1 53 193 241 53 1 4 243 P0C8F8 Transcription factor S-II-related protein OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=War-150 PE=2 SV=1
360 : U1R3V6_9EURY 0.40 0.58 1 57 57 113 57 0 0 113 U1R3V6 DNA-directed RNA polymerase subunit OS=halophilic archaeon J07HB67 GN=J07HB67_02126 PE=3 SV=1
361 : W0JP24_9EURY 0.40 0.55 1 55 45 99 55 0 0 102 W0JP24 DNA-directed RNA polymerase subunit OS=Halostagnicola larsenii XH-48 GN=HALLA_08605 PE=3 SV=1
362 : W0JRW8_9EURY 0.40 0.59 1 57 52 109 58 1 1 109 W0JRW8 DNA-directed RNA polymerase subunit OS=Halostagnicola larsenii XH-48 GN=HALLA_15095 PE=3 SV=1
363 : B0R695_HALS3 0.39 0.58 1 57 48 104 57 0 0 104 B0R695 DNA-directed RNA polymerase subunit OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=tfs2 PE=3 SV=1
364 : B7XNQ4_ENTBH 0.39 0.61 1 55 33 88 56 1 1 89 B7XNQ4 Uncharacterized protein OS=Enterocytozoon bieneusi (strain H348) GN=EBI_25970 PE=4 SV=1
365 : B7XPV1_ENTBH 0.39 0.61 1 55 39 94 56 1 1 95 B7XPV1 Uncharacterized protein OS=Enterocytozoon bieneusi (strain H348) GN=EBI_26246 PE=4 SV=1
366 : C4R114_PICPG 0.39 0.61 7 55 73 121 49 0 0 123 C4R114 DNA-directed RNA polymerase subunit OS=Komagataella pastoris (strain GS115 / ATCC 20864) GN=PAS_chr2-1_0554 PE=3 SV=1
367 : E0S649_ENCIT 0.39 0.61 5 55 55 104 54 2 7 104 E0S649 DNA-directed RNA polymerase subunit OS=Encephalitozoon intestinalis (strain ATCC 50506) GN=Eint_030400 PE=3 SV=1
368 : F2QSP3_PICP7 0.39 0.61 7 55 73 121 49 0 0 123 F2QSP3 DNA-directed RNA polymerase subunit OS=Komagataella pastoris (strain ATCC 76273 / CBS 7435 / CECT 11047 / NRRL Y-11430 / Wegner 21-1) GN=PP7435_Chr2-0735 PE=3 SV=1
369 : F4PUI3_DICFS 0.39 0.55 2 50 214 260 49 1 2 264 F4PUI3 RNA polymerase I subunit OS=Dictyostelium fasciculatum (strain SH3) GN=rpa12 PE=4 SV=1
370 : G2MLD4_9ARCH 0.39 0.56 2 57 51 107 57 1 1 107 G2MLD4 DNA-directed RNA polymerase subunit OS=halophilic archaeon DL31 GN=Halar_1985 PE=3 SV=1
371 : G4TWU1_PIRID 0.39 0.54 1 55 41 97 57 1 2 98 G4TWU1 Probable Rpc11-DNA-directed RNA polymerase III subunit C11 OS=Piriformospora indica (strain DSM 11827) GN=PIIN_11743 PE=4 SV=1
372 : G5CT13_9VIRU 0.39 0.61 5 54 117 167 51 1 1 170 G5CT13 Transcription factor S-II-related protein OS=Megavirus chiliensis GN=mg563 PE=4 SV=1
373 : H2EBF8_9VIRU 0.39 0.61 5 54 117 167 51 1 1 170 H2EBF8 Transcription factor S-II-related protein OS=Megavirus courdo7 GN=c7_L668 PE=4 SV=1
374 : H2EE76_9VIRU 0.39 0.57 5 54 117 167 51 1 1 170 H2EE76 Transcription factor S-II-related protein OS=Moumouvirus Monve GN=mv_R494 PE=4 SV=1
375 : I1BX20_RHIO9 0.39 0.65 1 55 28 81 57 2 5 82 I1BX20 Uncharacterized protein OS=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN=RO3G_05455 PE=4 SV=1
376 : K7Z8C4_9VIRU 0.39 0.61 5 54 117 167 51 1 1 170 K7Z8C4 Transcription factor S-II-related protein OS=Megavirus courdo11 GN=CE11_00605 PE=4 SV=1
377 : L7RG64_9VIRU 0.39 0.57 5 54 117 167 51 1 1 170 L7RG64 TFII-like transcription factor OS=Acanthamoeba polyphaga moumouvirus GN=Moumou_00486 PE=4 SV=1
378 : L7Y302_9VIRU 0.39 0.61 5 54 117 167 51 1 1 170 L7Y302 Transcription factor S-II-related protein OS=Megavirus lba GN=LBA_00574 PE=4 SV=1
379 : M0N4D5_9EURY 0.39 0.56 1 57 50 106 57 0 0 106 M0N4D5 DNA-directed RNA polymerase subunit OS=Halococcus thailandensis JCM 13552 GN=C451_13284 PE=3 SV=1
380 : M1I8N5_9PHYC 0.39 0.59 7 55 132 180 49 0 0 180 M1I8N5 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus NYs1 GN=NYs-1_181L PE=4 SV=1
381 : M1IIB7_9PHYC 0.39 0.59 7 55 132 180 49 0 0 180 M1IIB7 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus NY-2B GN=NY-2B_202L PE=4 SV=1
382 : M1PGV3_9VIRU 0.39 0.57 5 54 117 167 51 1 1 170 M1PGV3 Transcription factor OS=Moumouvirus goulette GN=glt_00444 PE=4 SV=1
383 : M5FQ66_DACSP 0.39 0.59 2 55 68 119 56 2 6 121 M5FQ66 DNA-directed RNA polymerase subunit OS=Dacryopinax sp. (strain DJM 731) GN=DACRYDRAFT_56314 PE=3 SV=1
384 : Q4Y0E1_PLACH 0.39 0.63 2 55 53 106 54 0 0 106 Q4Y0E1 DNA-directed RNA polymerase subunit OS=Plasmodium chabaudi GN=PC000189.02.0 PE=3 SV=1
385 : Q4YPC3_PLABA 0.39 0.63 2 55 53 106 54 0 0 106 Q4YPC3 DNA-directed RNA polymerase subunit OS=Plasmodium berghei (strain Anka) GN=PB000749.03.0 PE=3 SV=1
386 : Q6CHJ6_YARLI 0.39 0.59 5 55 74 122 51 1 2 124 Q6CHJ6 DNA-directed RNA polymerase subunit OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A08151g PE=3 SV=1
387 : Q6CV91_KLULA 0.39 0.59 2 55 105 158 54 0 0 160 Q6CV91 DNA-directed RNA polymerase subunit OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0B13860g PE=3 SV=1
388 : Q9HJG3_THEAC 0.39 0.55 7 56 50 100 51 1 1 100 Q9HJG3 DNA-directed RNA polymerase subunit OS=Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=Ta1006 PE=3 SV=1
389 : Q9HP96_HALSA 0.39 0.58 1 57 163 219 57 0 0 219 Q9HP96 Uncharacterized protein OS=Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1) GN=VNG_1743C PE=3 SV=1
390 : R0I784_9BRAS 0.39 0.55 1 55 46 101 56 1 1 102 R0I784 DNA-directed RNA polymerase subunit OS=Capsella rubella GN=CARUB_v10015575mg PE=3 SV=1
391 : R7SRM9_DICSQ 0.39 0.52 1 54 70 123 54 0 0 126 R7SRM9 DNA-directed RNA polymerase subunit OS=Dichomitus squalens (strain LYAD-421) GN=DICSQDRAFT_172663 PE=3 SV=1
392 : S9PTU1_SCHOY 0.39 0.55 5 55 67 117 51 0 0 119 S9PTU1 DNA-directed RNA polymerase subunit OS=Schizosaccharomyces octosporus (strain yFS286) GN=SOCG_04045 PE=3 SV=1
393 : S9VU67_SCHCR 0.39 0.55 5 55 67 117 51 0 0 119 S9VU67 DNA-directed RNA polymerase subunit OS=Schizosaccharomyces cryophilus (strain OY26 / ATCC MYA-4695 / CBS 11777 / NBRC 106824 / NRRL Y48691) GN=SPOG_05431 PE=3 SV=1
394 : T0L8N8_9MICR 0.39 0.59 1 55 49 104 56 1 1 105 T0L8N8 DNA-directed RNA polymerase subunit OS=Nosema apis BRL 01 GN=NAPIS_ORF01528 PE=3 SV=1
395 : V7PCC4_9APIC 0.39 0.63 2 55 53 106 54 0 0 106 V7PCC4 DNA-directed RNA polymerase subunit OS=Plasmodium yoelii 17X GN=YYC_04920 PE=3 SV=1
396 : W7A991_PLAVN 0.39 0.63 2 55 53 106 54 0 0 106 W7A991 DNA-directed RNA polymerase III subunit RPC10 OS=Plasmodium vinckei petteri GN=YYG_05008 PE=4 SV=1
397 : A6ZY12_YEAS7 0.38 0.60 1 55 52 109 58 1 3 110 A6ZY12 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain YJM789) GN=RPC11 PE=3 SV=1
398 : A7J6L9_PBCVF 0.38 0.55 1 55 126 180 55 0 0 180 A7J6L9 Putative uncharacterized protein N165L OS=Paramecium bursaria Chlorella virus FR483 GN=N165L PE=4 SV=1
399 : A8BBB2_GIAIC 0.38 0.56 1 55 50 101 55 1 3 103 A8BBB2 DNA-directed RNA polymerase subunit OS=Giardia intestinalis (strain ATCC 50803 / WB clone C6) GN=GL50803_8518 PE=3 SV=1
400 : A9UWA6_MONBE 0.38 0.60 1 55 55 107 55 1 2 109 A9UWA6 DNA-directed RNA polymerase subunit OS=Monosiga brevicollis GN=18537 PE=3 SV=1
401 : B0ENS7_ENTDS 0.38 0.62 1 55 49 106 58 2 3 107 B0ENS7 DNA-directed RNA polymerase subunit OS=Entamoeba dispar (strain ATCC PRA-260 / SAW760) GN=EDI_058230 PE=3 SV=1
402 : B3LGM2_YEAS1 0.38 0.60 1 55 52 109 58 1 3 110 B3LGM2 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_00468 PE=3 SV=1
403 : C4M8P1_ENTHI 0.38 0.64 1 55 49 106 58 2 3 107 C4M8P1 DNA-directed RNA polymerase subunit OS=Entamoeba histolytica GN=EHI_053450 PE=3 SV=1
404 : C5K7H8_PERM5 0.38 0.58 9 55 418 467 50 2 3 594 C5K7H8 DNA-directed RNA polymerase subunit OS=Perkinsus marinus (strain ATCC 50983 / TXsc) GN=Pmar_PMAR012494 PE=3 SV=1
405 : C7GTA4_YEAS2 0.38 0.60 1 55 52 109 58 1 3 110 C7GTA4 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain JAY291) GN=RPC11 PE=3 SV=1
406 : C8Z4W5_YEAS8 0.38 0.60 1 55 52 109 58 1 3 110 C8Z4W5 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=EC1118_1D0_2894g PE=3 SV=1
407 : D0N7W6_PHYIT 0.38 0.47 1 54 68 122 55 1 1 125 D0N7W6 DNA-directed RNA polymerase subunit OS=Phytophthora infestans (strain T30-4) GN=PITG_06706 PE=3 SV=1
408 : D2VL62_NAEGR 0.38 0.62 1 55 54 108 55 0 0 109 D2VL62 DNA-directed RNA polymerase subunit OS=Naegleria gruberi GN=NAEGRDRAFT_69676 PE=3 SV=1
409 : E1EY03_GIAIA 0.38 0.58 1 55 50 101 55 1 3 103 E1EY03 DNA-directed RNA polymerase subunit OS=Giardia intestinalis (strain P15) GN=GLP15_4249 PE=3 SV=1
410 : E6ZRH8_SPORE 0.38 0.54 1 55 72 127 56 1 1 129 E6ZRH8 DNA-directed RNA polymerase subunit OS=Sporisorium reilianum (strain SRZ2) GN=sr15753 PE=3 SV=1
411 : E7KAP6_YEASA 0.38 0.60 1 55 42 99 58 1 3 100 E7KAP6 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain AWRI796) GN=AWRI796_0794 PE=3 SV=1
412 : E7KLG0_YEASL 0.38 0.60 1 55 42 99 58 1 3 100 E7KLG0 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain Lalvin QA23) GN=QA23_0782 PE=3 SV=1
413 : E7LSJ1_YEASV 0.38 0.60 1 55 42 99 58 1 3 100 E7LSJ1 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain VIN 13) GN=VIN13_0781 PE=3 SV=1
414 : E7NFL0_YEASO 0.38 0.60 1 55 42 99 58 1 3 100 E7NFL0 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain FostersO) GN=FOSTERSO_0619 PE=3 SV=1
415 : E7Q235_YEASB 0.38 0.60 1 55 42 99 58 1 3 100 E7Q235 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain FostersB) GN=FOSTERSB_0772 PE=3 SV=1
416 : E7QCQ8_YEASZ 0.38 0.60 1 55 42 99 58 1 3 100 E7QCQ8 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=VL3_0785 PE=3 SV=1
417 : F0VN62_NEOCL 0.38 0.56 1 55 53 105 55 1 2 106 F0VN62 DNA-directed RNA polymerase subunit OS=Neospora caninum (strain Liverpool) GN=NCLIV_055830 PE=3 SV=1
418 : F2U3L2_SALR5 0.38 0.55 1 55 53 107 55 0 0 108 F2U3L2 DNA-directed RNA polymerase subunit OS=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) GN=PTSG_02879 PE=3 SV=1
419 : G0LN03_HALWC 0.38 0.60 1 57 49 106 58 1 1 106 G0LN03 DNA-directed RNA polymerase subunit OS=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) GN=tfs3 PE=3 SV=1
420 : G2WAF1_YEASK 0.38 0.60 1 55 52 109 58 1 3 110 G2WAF1 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain Kyokai no. 7 / NBRC 101557) GN=K7_RPC11 PE=3 SV=1
421 : H0GE07_9SACH 0.38 0.60 1 55 42 99 58 1 3 100 H0GE07 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_0774 PE=3 SV=1
422 : H3GG85_PHYRM 0.38 0.47 1 54 68 122 55 1 1 125 H3GG85 DNA-directed RNA polymerase subunit OS=Phytophthora ramorum PE=3 SV=1
423 : I2FR07_USTH4 0.38 0.54 1 55 72 127 56 1 1 129 I2FR07 DNA-directed RNA polymerase subunit OS=Ustilago hordei (strain Uh4875-4) GN=UHOR_07782 PE=3 SV=1
424 : I7BJJ1_NATSJ 0.38 0.57 1 57 55 112 58 1 1 112 I7BJJ1 DNA-directed RNA polymerase subunit OS=Natrinema sp. (strain J7-2) GN=NJ7G_1239 PE=3 SV=1
425 : I8IBM9_ASPO3 0.38 0.56 1 52 71 122 52 0 0 122 I8IBM9 DNA-directed RNA polymerase subunit OS=Aspergillus oryzae (strain 3.042) GN=Ao3042_09099 PE=3 SV=1
426 : J8Q6L4_SACAR 0.38 0.60 1 55 52 109 58 1 3 110 J8Q6L4 DNA-directed RNA polymerase subunit OS=Saccharomyces arboricola (strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_0603 PE=3 SV=1
427 : J9VX92_CRYNH 0.38 0.62 1 50 79 126 50 1 2 133 J9VX92 DNA-directed RNA polymerase subunit OS=Cryptococcus neoformans var. grubii serotype A (strain H99 / ATCC 208821 / CBS 10515 / FGSC 9487) GN=CNAG_01810 PE=3 SV=1
428 : K1X9B7_MARBU 0.38 0.55 1 55 71 124 55 1 1 126 K1X9B7 DNA-directed RNA polymerase subunit OS=Marssonina brunnea f. sp. multigermtubi (strain MB_m1) GN=MBM_00754 PE=3 SV=1
429 : K2G7P7_ENTNP 0.38 0.64 1 55 49 106 58 2 3 107 K2G7P7 DNA-directed RNA polymerase subunit OS=Entamoeba nuttalli (strain P19) GN=ENU1_164760 PE=3 SV=1
430 : K2QQE7_MACPH 0.38 0.58 1 55 66 119 55 1 1 121 K2QQE7 DNA-directed RNA polymerase subunit OS=Macrophomina phaseolina (strain MS6) GN=MPH_10756 PE=3 SV=1
431 : K2SAY2_MACPH 0.38 0.62 2 54 249 300 53 1 1 302 K2SAY2 Zinc finger TFIIS-type protein OS=Macrophomina phaseolina (strain MS6) GN=MPH_00663 PE=4 SV=1
432 : K3X016_PYTUL 0.38 0.47 1 54 66 120 55 1 1 123 K3X016 DNA-directed RNA polymerase subunit OS=Pythium ultimum GN=PYU1_G010542 PE=3 SV=1
433 : L9XFD4_9EURY 0.38 0.53 1 55 45 99 55 0 0 102 L9XFD4 DNA-directed RNA polymerase subunit OS=Natronococcus amylolyticus DSM 10524 GN=C491_04055 PE=3 SV=1
434 : L9Z3C3_9EURY 0.38 0.57 1 57 52 109 58 1 1 109 L9Z3C3 DNA-directed RNA polymerase subunit OS=Natrinema pallidum DSM 3751 GN=C487_05069 PE=3 SV=1
435 : L9Z8R5_9EURY 0.38 0.57 1 57 52 109 58 1 1 109 L9Z8R5 DNA-directed RNA polymerase subunit OS=Natrinema gari JCM 14663 GN=C486_03504 PE=3 SV=1
436 : L9ZJ32_9EURY 0.38 0.57 1 57 52 109 58 1 1 109 L9ZJ32 DNA-directed RNA polymerase subunit OS=Natrinema altunense JCM 12890 GN=C485_10310 PE=3 SV=1
437 : M0CUN9_9EURY 0.38 0.57 1 57 50 107 58 1 1 107 M0CUN9 DNA-directed RNA polymerase subunit OS=Halosimplex carlsbadense 2-9-1 GN=C475_08446 PE=3 SV=1
438 : M0DBE8_9EURY 0.38 0.64 1 57 50 107 58 1 1 107 M0DBE8 DNA-directed RNA polymerase subunit OS=Halosarcina pallida JCM 14848 GN=C474_05920 PE=3 SV=1
439 : M0E3B4_9EURY 0.38 0.59 1 57 52 109 58 1 1 109 M0E3B4 DNA-directed RNA polymerase subunit OS=Halorubrum saccharovorum DSM 1137 GN=C471_04545 PE=3 SV=1
440 : M0EEB9_9EURY 0.38 0.59 1 57 52 109 58 1 1 109 M0EEB9 DNA-directed RNA polymerase subunit OS=Halorubrum californiensis DSM 19288 GN=C463_05061 PE=3 SV=1
441 : M0PHW1_9EURY 0.38 0.60 1 57 52 109 58 1 1 109 M0PHW1 DNA-directed RNA polymerase subunit OS=Halorubrum arcis JCM 13916 GN=C462_13101 PE=3 SV=1
442 : M1HI74_9PHYC 0.38 0.56 1 55 126 180 55 0 0 180 M1HI74 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus OR0704.2.2 GN=OR0704.2.2_154L PE=4 SV=1
443 : M2R9L4_ENTHI 0.38 0.64 1 55 49 106 58 2 3 107 M2R9L4 DNA-directed RNA polymerase subunit OS=Entamoeba histolytica KU27 GN=EHI5A_033070 PE=3 SV=1
444 : M2YNN5_MYCFI 0.38 0.60 5 54 262 310 50 1 1 312 M2YNN5 Uncharacterized protein OS=Mycosphaerella fijiensis (strain CIRAD86) GN=MYCFIDRAFT_57652 PE=4 SV=1
445 : M3ANB6_MYCFI 0.38 0.55 1 55 66 120 55 0 0 122 M3ANB6 DNA-directed RNA polymerase subunit OS=Mycosphaerella fijiensis (strain CIRAD86) GN=MYCFIDRAFT_78333 PE=3 SV=1
446 : M3S2V1_ENTHI 0.38 0.64 1 55 49 106 58 2 3 107 M3S2V1 DNA-directed RNA polymerase subunit OS=Entamoeba histolytica HM-1:IMSS-B GN=EHI8A_023550 PE=3 SV=1
447 : M4BZT8_HYAAE 0.38 0.47 1 54 68 122 55 1 1 125 M4BZT8 DNA-directed RNA polymerase subunit OS=Hyaloperonospora arabidopsidis (strain Emoy2) PE=3 SV=1
448 : M7VYE8_ENTHI 0.38 0.64 1 55 49 106 58 2 3 107 M7VYE8 DNA-directed RNA polymerase subunit OS=Entamoeba histolytica HM-3:IMSS GN=KM1_041050 PE=3 SV=1
449 : M9MIV5_PSEA3 0.38 0.54 1 55 72 127 56 1 1 129 M9MIV5 DNA-directed RNA polymerase subunit OS=Pseudozyma antarctica (strain T-34) GN=PANT_26c00008 PE=3 SV=1
450 : N1P824_YEASC 0.38 0.60 1 55 52 109 58 1 3 110 N1P824 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae (strain CEN.PK113-7D) GN=CENPK1137D_3865 PE=3 SV=1
451 : N9V9I9_ENTHI 0.38 0.64 1 55 49 106 58 2 3 107 N9V9I9 DNA-directed RNA polymerase subunit OS=Entamoeba histolytica HM-1:IMSS-A GN=EHI7A_016180 PE=3 SV=1
452 : Q2UH76_ASPOR 0.38 0.56 1 52 71 122 52 0 0 122 Q2UH76 DNA-directed RNA polymerase subunit OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090023000556 PE=3 SV=1
453 : Q4P4T4_USTMA 0.38 0.54 1 55 90 145 56 1 1 147 Q4P4T4 DNA-directed RNA polymerase subunit OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UM04879.1 PE=3 SV=1
454 : Q97AQ6_THEVO 0.38 0.56 6 56 55 106 52 1 1 106 Q97AQ6 DNA-directed RNA polymerase subunit OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=TV0753 PE=3 SV=1
455 : R1GBV2_BOTPV 0.38 0.62 2 54 249 300 53 1 1 302 R1GBV2 Putative transcription elongation factor s-ii protein OS=Botryosphaeria parva (strain UCR-NP2) GN=UCRNP2_4245 PE=4 SV=1
456 : R1GI34_BOTPV 0.38 0.58 1 55 66 119 55 1 1 121 R1GI34 DNA-directed RNA polymerase subunit OS=Botryosphaeria parva (strain UCR-NP2) GN=UCRNP2_1877 PE=3 SV=1
457 : RPC10_YEAST 0.38 0.60 1 55 52 109 58 1 3 110 Q04307 DNA-directed RNA polymerase III subunit RPC10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC11 PE=1 SV=1
458 : TFS2_ASFK5 0.38 0.51 1 53 193 241 53 1 4 243 P0C8F5 Transcription factor S-II-related protein OS=African swine fever virus (isolate Pig/Kenya/KEN-50/1950) GN=Ken-151 PE=2 SV=1
459 : U1MH48_9EURY 0.38 0.59 1 57 50 107 58 1 1 107 U1MH48 DNA-directed RNA polymerase subunit OS=halophilic archaeon J07HX5 GN=J07HX5_00755 PE=3 SV=1
460 : U1PVJ8_9EURY 0.38 0.52 1 57 39 96 58 1 1 96 U1PVJ8 DNA-directed RNA polymerase, subunit M/transcription elongation factor TFIIS OS=Haloquadratum sp. J07HQX50 GN=J07HQX50_01897 PE=4 SV=1
461 : V4IYJ1_9EURY 0.38 0.60 1 57 51 108 58 1 1 108 V4IYJ1 DNA-directed RNA polymerase subunit OS=Candidatus Halobonum tyrrellensis G22 GN=K933_10365 PE=3 SV=1
462 : V4XP55_9ARCH 0.38 0.59 1 57 52 109 58 1 1 109 V4XP55 DNA-directed RNA polymerase subunit OS=uncultured archaeon A07HR67 GN=A07HR67_01517 PE=3 SV=1
463 : V5EYD7_PSEBG 0.38 0.54 1 55 72 127 56 1 1 129 V5EYD7 DNA-directed RNA polymerase subunit OS=Pseudozyma brasiliensis (strain GHG001) GN=PSEUBRA_SCAF15g05718 PE=3 SV=1
464 : V6TM16_GIAIN 0.38 0.56 1 55 50 101 55 1 3 103 V6TM16 DNA-directed RNA polymerase subunit OS=Giardia intestinalis GN=DHA2_8518 PE=3 SV=1
465 : V9F876_PHYPR 0.38 0.47 1 54 68 122 55 1 1 125 V9F876 DNA-directed RNA polymerase subunit OS=Phytophthora parasitica P1569 GN=F443_08740 PE=3 SV=1
466 : W2L9H6_PHYPR 0.38 0.47 1 54 68 122 55 1 1 125 W2L9H6 DNA-directed RNA polymerase subunit OS=Phytophthora parasitica GN=L914_08455 PE=3 SV=1
467 : W2Q827_PHYPN 0.38 0.47 1 54 68 122 55 1 1 125 W2Q827 DNA-directed RNA polymerase subunit OS=Phytophthora parasitica (strain INRA-310) GN=PPTG_11085 PE=3 SV=1
468 : W2X2Y9_PHYPR 0.38 0.47 1 54 68 122 55 1 1 125 W2X2Y9 DNA-directed RNA polymerase subunit OS=Phytophthora parasitica CJ01A1 GN=F441_08717 PE=3 SV=1
469 : W2ZCT9_PHYPR 0.38 0.47 1 54 68 122 55 1 1 125 W2ZCT9 DNA-directed RNA polymerase subunit OS=Phytophthora parasitica P10297 GN=F442_08674 PE=3 SV=1
470 : W3VG21_9BASI 0.38 0.54 1 55 192 247 56 1 1 249 W3VG21 Uncharacterized protein OS=Pseudozyma aphidis DSM 70725 GN=PaG_05305 PE=4 SV=1
471 : W7PJI4_YEASX 0.38 0.60 1 55 52 109 58 1 3 110 W7PJI4 Rpc11p OS=Saccharomyces cerevisiae R008 GN=Rpc11 PE=4 SV=1
472 : A1CJN6_ASPCL 0.37 0.61 2 55 252 304 54 1 1 304 A1CJN6 Transcription elongation factor S-II OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_035630 PE=4 SV=1
473 : A1D7T3_NEOFI 0.37 0.61 2 55 252 304 54 1 1 304 A1D7T3 Transcription elongation factor S-II OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=NFIA_069480 PE=4 SV=1
474 : B0XYM5_ASPFC 0.37 0.61 2 55 252 304 54 1 1 304 B0XYM5 Transcription elongation factor S-II OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_041430 PE=4 SV=1
475 : B6H6B1_PENCW 0.37 0.59 2 55 254 306 54 1 1 306 B6H6B1 Pc15g01750 protein OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=Pc15g01750 PE=4 SV=1
476 : B6Q634_PENMQ 0.37 0.58 1 55 63 116 57 2 5 116 B6Q634 DNA-directed RNA polymerase subunit OS=Penicillium marneffei (strain ATCC 18224 / CBS 334.59 / QM 7333) GN=PMAA_024020 PE=3 SV=1
477 : B8M829_TALSN 0.37 0.58 1 55 63 116 57 2 5 116 B8M829 DNA-directed RNA polymerase subunit OS=Talaromyces stipitatus (strain ATCC 10500 / CBS 375.48 / QM 6759 / NRRL 1006) GN=TSTA_032470 PE=3 SV=1
478 : C8V9V9_EMENI 0.37 0.59 2 55 252 304 54 1 1 304 C8V9V9 Transcription elongation factor S-II (AFU_orthologue AFUA_3G07670) OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=ANIA_04861 PE=4 SV=1
479 : E0VBV6_PEDHC 0.37 0.54 1 52 70 119 52 1 2 124 E0VBV6 DNA-directed RNA polymerase subunit OS=Pediculus humanus subsp. corporis GN=Phum_PHUM073930 PE=3 SV=1
480 : E4UV71_ARTGP 0.37 0.57 2 55 245 297 54 1 1 297 E4UV71 Transcription elongation factor S-II OS=Arthroderma gypseum (strain ATCC MYA-4604 / CBS 118893) GN=MGYG_05201 PE=4 SV=1
481 : F2T5D7_AJEDA 0.37 0.61 2 55 321 373 54 1 1 373 F2T5D7 Transcription elongation factor S-II OS=Ajellomyces dermatitidis (strain ATCC 18188 / CBS 674.68) GN=BDDG_01299 PE=4 SV=1
482 : G1DG17_CAPHI 0.37 0.51 2 55 60 108 57 4 11 108 G1DG17 DNA-directed RNA polymerase subunit OS=Capra hircus GN=POLR3K PE=3 SV=1
483 : G7JQD3_MEDTR 0.37 0.57 2 55 61 114 54 0 0 115 G7JQD3 DNA-directed RNA polymerase subunit OS=Medicago truncatula GN=MTR_3g102420 PE=3 SV=1
484 : I0YMM1_9CHLO 0.37 0.61 1 54 72 125 54 0 0 127 I0YMM1 Uncharacterized protein OS=Coccomyxa subellipsoidea C-169 GN=COCSUDRAFT_25684 PE=4 SV=1
485 : K9GWQ2_PEND2 0.37 0.61 2 55 254 306 54 1 1 306 K9GWQ2 Transcription elongation factor S-II OS=Penicillium digitatum (strain PHI26 / CECT 20796) GN=PDIG_05400 PE=4 SV=1
486 : K9H2G0_PEND1 0.37 0.61 2 55 254 306 54 1 1 306 K9H2G0 Transcription elongation factor S-II OS=Penicillium digitatum (strain Pd1 / CECT 20795) GN=PDIP_10070 PE=4 SV=1
487 : M2Y045_GALSU 0.37 0.52 1 54 100 153 54 0 0 156 M2Y045 DNA-directed RNA polymerase I subunit A12 OS=Galdieria sulphuraria GN=Gasu_34100 PE=4 SV=1
488 : N1PBU7_MYCP1 0.37 0.57 1 54 259 311 54 1 1 313 N1PBU7 Uncharacterized protein OS=Mycosphaerella pini (strain NZE10 / CBS 128990) GN=DOTSEDRAFT_75850 PE=4 SV=1
489 : N4VBH7_COLOR 0.37 0.57 2 55 67 119 54 1 1 121 N4VBH7 DNA-directed RNA polymerase subunit OS=Colletotrichum orbiculare (strain 104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422) GN=Cob_07020 PE=3 SV=1
490 : Q16SW6_AEDAE 0.37 0.48 1 52 65 116 52 0 0 121 Q16SW6 DNA-directed RNA polymerase subunit OS=Aedes aegypti GN=AAEL010468 PE=3 SV=1
491 : Q16SW7_AEDAE 0.37 0.48 1 52 68 119 52 0 0 124 Q16SW7 DNA-directed RNA polymerase subunit OS=Aedes aegypti GN=AAEL010468 PE=3 SV=1
492 : Q4WWZ7_ASPFU 0.37 0.61 2 55 252 304 54 1 1 304 Q4WWZ7 Transcription elongation factor S-II OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_3G07670 PE=4 SV=1
493 : Q7PR45_ANOGA 0.37 0.54 1 52 58 109 52 0 0 114 Q7PR45 DNA-directed RNA polymerase subunit OS=Anopheles gambiae GN=AGAP002375 PE=3 SV=4
494 : RPA12_SCHPO 0.37 0.55 5 55 67 117 51 0 0 119 O94703 DNA-directed RNA polymerase I subunit RPA12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rpa12 PE=3 SV=1
495 : S8ALI5_PENO1 0.37 0.61 2 55 251 303 54 1 1 303 S8ALI5 Uncharacterized protein OS=Penicillium oxalicum (strain 114-2 / CGMCC 5302) GN=PDE_01661 PE=4 SV=1
496 : T0KI34_COLGC 0.37 0.59 2 55 67 119 54 1 1 121 T0KI34 DNA-directed RNA polymerase subunit OS=Colletotrichum gloeosporioides (strain Cg-14) GN=CGLO_07900 PE=3 SV=1
497 : V4U1V5_9ROSI 0.37 0.54 1 55 59 110 57 2 7 110 V4U1V5 DNA-directed RNA polymerase subunit OS=Citrus clementina GN=CICLE_v10022957mg PE=3 SV=1
498 : V6LHL5_9EUKA 0.37 0.61 5 55 53 103 51 0 0 105 V6LHL5 DNA-directed RNA polymerase subunit OS=Spironucleus salmonicida GN=SS50377_16131 PE=3 SV=1
499 : V7CX97_PHAVU 0.37 0.56 2 55 61 114 54 0 0 115 V7CX97 DNA-directed RNA polymerase subunit OS=Phaseolus vulgaris GN=PHAVU_001G175600g PE=3 SV=1
500 : W4WS28_ATTCE 0.37 0.50 1 52 69 120 52 0 0 125 W4WS28 DNA-directed RNA polymerase subunit OS=Atta cephalotes PE=3 SV=1
501 : W6Q577_PENRO 0.37 0.59 2 55 253 305 54 1 1 305 W6Q577 Transcription elongation factor S-II, central domain OS=Penicillium roqueforti GN=PROQFM164_S02g001939 PE=4 SV=1
502 : A4HY64_LEIIN 0.36 0.57 2 55 98 150 58 2 9 151 A4HY64 DNA-directed RNA polymerase subunit OS=Leishmania infantum GN=LINJ_19_0420 PE=3 SV=1
503 : B9PK71_TOXGO 0.36 0.55 1 55 53 105 55 1 2 106 B9PK71 DNA-directed RNA polymerase III RPC11 OS=Toxoplasma gondii GN=TGVEG_312250 PE=4 SV=1
504 : C4V7E3_NOSCE 0.36 0.55 1 55 49 104 56 1 1 105 C4V7E3 DNA-directed RNA polymerase subunit OS=Nosema ceranae (strain BRL01) GN=NCER_100370 PE=3 SV=1
505 : C5DE90_LACTC 0.36 0.57 1 55 69 126 58 1 3 127 C5DE90 DNA-directed RNA polymerase subunit OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=KLTH0C07216g PE=3 SV=1
506 : E4NN06_HALBP 0.36 0.53 2 55 50 104 55 1 1 107 E4NN06 DNA-directed RNA polymerase subunit OS=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) GN=Hbor_18510 PE=3 SV=1
507 : E4NPQ4_HALBP 0.36 0.64 1 57 50 107 58 1 1 107 E4NPQ4 DNA-directed RNA polymerase subunit OS=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) GN=Hbor_09430 PE=3 SV=1
508 : E9ARZ4_LEIMU 0.36 0.57 2 55 98 150 58 2 9 151 E9ARZ4 DNA-directed RNA polymerase subunit OS=Leishmania mexicana (strain MHOM/GT/2001/U1103) GN=LMXM_19_0420 PE=3 SV=1
509 : E9BE37_LEIDB 0.36 0.57 2 55 98 150 58 2 9 151 E9BE37 DNA-directed RNA polymerase subunit OS=Leishmania donovani (strain BPK282A1) GN=LDBPK_190420 PE=3 SV=1
510 : F0XI16_GROCL 0.36 0.49 1 55 67 120 55 1 1 122 F0XI16 DNA-directed RNA polymerase subunit OS=Grosmannia clavigera (strain kw1407 / UAMH 11150) GN=CMQ_2680 PE=3 SV=1
511 : G0HX58_HALHT 0.36 0.59 1 57 50 107 58 1 1 107 G0HX58 DNA-directed RNA polymerase subunit OS=Haloarcula hispanica (strain ATCC 33960 / DSM 4426 / JCM 8911 / NBRC 102182 / NCIMB 2187 / VKM B-1755) GN=rpoM2 PE=3 SV=1
512 : G0V827_NAUCC 0.36 0.62 1 55 52 109 58 1 3 110 G0V827 DNA-directed RNA polymerase subunit OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=NCAS0A10670 PE=3 SV=1
513 : G0W4I0_NAUDC 0.36 0.62 1 55 52 109 58 1 3 110 G0W4I0 DNA-directed RNA polymerase subunit OS=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) GN=NDAI0A05630 PE=3 SV=1
514 : G2MJS3_9ARCH 0.36 0.53 2 55 48 102 55 1 1 105 G2MJS3 DNA-directed RNA polymerase subunit OS=halophilic archaeon DL31 GN=Halar_1381 PE=3 SV=1
515 : G4Z1G2_PHYSP 0.36 0.45 1 54 68 122 55 1 1 125 G4Z1G2 DNA-directed RNA polymerase subunit OS=Phytophthora sojae (strain P6497) GN=PHYSODRAFT_487107 PE=3 SV=1
516 : G8C0H9_TETPH 0.36 0.60 1 55 52 109 58 1 3 110 G8C0H9 DNA-directed RNA polymerase subunit OS=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) GN=TPHA0M01190 PE=3 SV=1
517 : H0GSL5_9SACH 0.36 0.60 1 55 52 109 58 1 3 110 H0GSL5 DNA-directed RNA polymerase subunit OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_6165 PE=3 SV=1
518 : H2AMF0_KAZAF 0.36 0.62 1 55 52 109 58 1 3 110 H2AMF0 DNA-directed RNA polymerase subunit OS=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) GN=KAFR0A01110 PE=3 SV=1
519 : H6BQ42_EXODN 0.36 0.62 1 56 63 117 58 2 5 117 H6BQ42 DNA-directed RNA polymerase subunit OS=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) GN=HMPREF1120_02656 PE=3 SV=1
520 : I2H905_TETBL 0.36 0.62 1 55 53 110 58 1 3 111 I2H905 DNA-directed RNA polymerase subunit OS=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) GN=TBLA0I01990 PE=3 SV=1
521 : I3R4K9_HALMT 0.36 0.51 2 55 49 103 55 1 1 106 I3R4K9 DNA-directed RNA polymerase subunit OS=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) GN=rpoM1 PE=3 SV=1
522 : I7ALY3_ENCRO 0.36 0.52 1 55 48 104 58 2 4 104 I7ALY3 DNA-directed RNA polymerase subunit OS=Encephalitozoon romaleae (strain SJ-2008) GN=EROM_030380 PE=3 SV=1
523 : J3EVD2_9EURY 0.36 0.59 1 57 43 100 58 1 1 100 J3EVD2 DNA-directed RNA polymerase subunit OS=Halogranum salarium B-1 GN=HSB1_30400 PE=3 SV=1
524 : J4KM35_BEAB2 0.36 0.60 1 55 67 120 55 1 1 122 J4KM35 DNA-directed RNA polymerase subunit OS=Beauveria bassiana (strain ARSEF 2860) GN=BBA_07864 PE=3 SV=1
525 : J7S8G9_KAZNA 0.36 0.62 1 55 52 109 58 1 3 110 J7S8G9 DNA-directed RNA polymerase subunit OS=Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0H01160 PE=3 SV=1
526 : K3W2F3_FUSPC 0.36 0.60 1 55 67 120 55 1 1 122 K3W2F3 DNA-directed RNA polymerase subunit OS=Fusarium pseudograminearum (strain CS3096) GN=FPSE_02300 PE=3 SV=1
527 : L0JM35_NATP1 0.36 0.59 1 57 52 109 58 1 1 109 L0JM35 DNA-directed RNA polymerase subunit OS=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) GN=Natpe_2064 PE=3 SV=1
528 : L8GGG4_ACACA 0.36 0.64 1 54 51 105 55 1 1 107 L8GGG4 DNA-directed RNA polymerase subunit OS=Acanthamoeba castellanii str. Neff GN=ACA1_140560 PE=3 SV=1
529 : M0BJN6_9EURY 0.36 0.59 1 57 52 109 58 1 1 109 M0BJN6 DNA-directed RNA polymerase subunit OS=Haloterrigena thermotolerans DSM 11522 GN=C478_16832 PE=3 SV=1
530 : M0D9F1_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0D9F1 DNA-directed RNA polymerase subunit OS=Halorubrum terrestre JCM 10247 GN=C473_08762 PE=3 SV=1
531 : M0DDM3_9EURY 0.36 0.59 1 57 52 109 58 1 1 109 M0DDM3 DNA-directed RNA polymerase subunit OS=Halorubrum tebenquichense DSM 14210 GN=C472_14286 PE=3 SV=1
532 : M0EMH8_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0EMH8 DNA-directed RNA polymerase subunit OS=Halorubrum coriense DSM 10284 GN=C464_05975 PE=3 SV=1
533 : M0ES19_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0ES19 DNA-directed RNA polymerase subunit OS=Halorubrum distributum JCM 9100 GN=C465_07088 PE=3 SV=1
534 : M0F9G7_9EURY 0.36 0.59 1 57 52 109 58 1 1 109 M0F9G7 DNA-directed RNA polymerase subunit OS=Halorubrum hochstenium ATCC 700873 GN=C467_08919 PE=3 SV=1
535 : M0FEB8_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0FEB8 DNA-directed RNA polymerase subunit OS=Halorubrum distributum JCM 10118 GN=C466_02639 PE=3 SV=1
536 : M0HCE8_9EURY 0.36 0.51 2 55 49 103 55 1 1 106 M0HCE8 DNA-directed RNA polymerase subunit OS=Haloferax larsenii JCM 13917 GN=C455_03339 PE=3 SV=1
537 : M0HQP9_9EURY 0.36 0.51 2 55 49 103 55 1 1 106 M0HQP9 DNA-directed RNA polymerase subunit OS=Haloferax elongans ATCC BAA-1513 GN=C453_09353 PE=3 SV=1
538 : M0JM43_HALVA 0.36 0.59 1 57 50 107 58 1 1 107 M0JM43 DNA-directed RNA polymerase subunit OS=Haloarcula vallismortis ATCC 29715 GN=C437_03946 PE=3 SV=1
539 : M0JV69_9EURY 0.36 0.59 1 57 50 107 58 1 1 107 M0JV69 DNA-directed RNA polymerase subunit OS=Haloarcula sinaiiensis ATCC 33800 GN=C436_11583 PE=3 SV=1
540 : M0KKB7_9EURY 0.36 0.59 1 57 50 107 58 1 1 107 M0KKB7 DNA-directed RNA polymerase subunit OS=Haloarcula amylolytica JCM 13557 GN=C442_10011 PE=3 SV=1
541 : M0KQQ9_9EURY 0.36 0.59 1 57 50 107 58 1 1 107 M0KQQ9 DNA-directed RNA polymerase subunit OS=Haloarcula californiae ATCC 33799 GN=C435_05518 PE=3 SV=1
542 : M0KTH0_HALAR 0.36 0.59 1 57 50 107 58 1 1 107 M0KTH0 DNA-directed RNA polymerase subunit OS=Haloarcula argentinensis DSM 12282 GN=C443_07568 PE=3 SV=1
543 : M0L7W5_HALJP 0.36 0.59 1 57 50 107 58 1 1 107 M0L7W5 DNA-directed RNA polymerase subunit OS=Haloarcula japonica DSM 6131 GN=C444_12947 PE=3 SV=1
544 : M0NLI1_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0NLI1 DNA-directed RNA polymerase subunit OS=Halorubrum litoreum JCM 13561 GN=C470_11849 PE=3 SV=1
545 : M0P6N8_9EURY 0.36 0.59 1 57 52 109 58 1 1 109 M0P6N8 DNA-directed RNA polymerase subunit OS=Halorubrum kocurii JCM 14978 GN=C468_05863 PE=3 SV=1
546 : M0PC96_9EURY 0.36 0.60 1 57 52 109 58 1 1 109 M0PC96 DNA-directed RNA polymerase subunit OS=Halorubrum aidingense JCM 13560 GN=C461_10433 PE=3 SV=1
547 : M1I3N0_9PHYC 0.36 0.55 1 55 126 180 55 0 0 180 M1I3N0 Transcription elongation factor S-II OS=Paramecium bursaria Chlorella virus Fr5L GN=Fr5L_193L PE=4 SV=1
548 : M2X9V1_GALSU 0.36 0.53 1 55 151 204 55 1 1 204 M2X9V1 Transcription elongation factor S-II OS=Galdieria sulphuraria GN=Gasu_57710 PE=4 SV=1
549 : Q4QDH9_LEIMA 0.36 0.57 2 55 98 150 58 2 9 151 Q4QDH9 DNA-directed RNA polymerase subunit OS=Leishmania major GN=LMJF_19_0420 PE=3 SV=1
550 : Q5V537_HALMA 0.36 0.59 1 57 50 107 58 1 1 107 Q5V537 DNA-directed RNA polymerase subunit OS=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) GN=rpoM PE=3 SV=1
551 : Q6FRH9_CANGA 0.36 0.62 1 55 42 99 58 1 3 100 Q6FRH9 DNA-directed RNA polymerase subunit OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0H08415g PE=3 SV=1
552 : R4VXK3_9EURY 0.36 0.53 1 57 50 107 58 1 1 107 R4VXK3 DNA-directed RNA polymerase subunit OS=Salinarchaeum sp. Harcht-Bsk1 GN=L593_10200 PE=3 SV=1
553 : R9PB71_PSEHS 0.36 0.54 1 55 71 126 56 1 1 128 R9PB71 DNA-directed RNA polymerase subunit OS=Pseudozyma hubeiensis (strain SY62) GN=PHSY_006076 PE=3 SV=1
554 : S6EZP6_ZYGB2 0.36 0.62 1 55 52 109 58 1 3 110 S6EZP6 DNA-directed RNA polymerase subunit OS=Zygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227) GN=BN860_17304g PE=3 SV=1
555 : S7USS3_TOXGO 0.36 0.55 1 55 53 105 55 1 2 106 S7USS3 DNA-directed RNA polymerase subunit OS=Toxoplasma gondii GT1 GN=TGGT1_312250 PE=3 SV=1
556 : S8EY31_TOXGO 0.36 0.55 1 55 53 105 55 1 2 106 S8EY31 DNA-directed RNA polymerase subunit OS=Toxoplasma gondii ME49 GN=POLR3K PE=3 SV=1
557 : U1Q8S4_9EURY 0.36 0.59 1 57 52 109 58 1 1 109 U1Q8S4 DNA-directed RNA polymerase subunit OS=Halonotius sp. J07HN6 GN=J07HN6_00286 PE=3 SV=1
558 : V4Y6P8_9ARCH 0.36 0.60 1 57 52 109 58 1 1 109 V4Y6P8 DNA-directed RNA polymerase subunit OS=uncultured archaeon A07HN63 GN=A07HN63_01934 PE=3 SV=1
559 : V5A9J8_9ARCH 0.36 0.59 1 57 50 107 58 1 1 107 V5A9J8 DNA-directed RNA polymerase subunit OS=uncultured archaeon A07HR60 GN=A07HR60_00884 PE=3 SV=1
560 : V5TJF4_HALHI 0.36 0.59 1 57 50 107 58 1 1 107 V5TJF4 DNA-directed RNA polymerase subunit OS=Haloarcula hispanica N601 GN=HISP_05405 PE=3 SV=1
561 : V9DNU7_9EURO 0.36 0.60 1 56 63 117 58 2 5 117 V9DNU7 DNA-directed RNA polymerase subunit OS=Cladophialophora carrionii CBS 160.54 GN=G647_01024 PE=3 SV=1
562 : W0VNF3_ZYGBA 0.36 0.62 1 55 52 109 58 1 3 110 W0VNF3 DNA-directed RNA polymerase subunit OS=Zygosaccharomyces bailii ISA1307 GN=ZbRPC11 PE=3 SV=1
563 : W0W573_ZYGBA 0.36 0.62 1 55 52 109 58 1 3 110 W0W573 DNA-directed RNA polymerase subunit OS=Zygosaccharomyces bailii ISA1307 GN=ZbRPC11 PE=3 SV=1
564 : F6H1M5_VITVI 0.35 0.53 1 55 51 107 57 2 2 109 F6H1M5 DNA-directed RNA polymerase subunit OS=Vitis vinifera GN=VIT_18s0001g14650 PE=3 SV=1
565 : K4C2R4_SOLLC 0.35 0.49 1 55 59 110 57 2 7 111 K4C2R4 DNA-directed RNA polymerase subunit OS=Solanum lycopersicum GN=Solyc05g055890.2 PE=3 SV=1
566 : K9FG47_PEND1 0.35 0.46 1 55 64 115 57 2 7 116 K9FG47 DNA-directed RNA polymerase subunit OS=Penicillium digitatum (strain Pd1 / CECT 20795) GN=PDIP_69000 PE=3 SV=1
567 : K9G9J0_PEND2 0.35 0.46 1 55 64 115 57 2 7 116 K9G9J0 DNA-directed RNA polymerase subunit OS=Penicillium digitatum (strain PHI26 / CECT 20796) GN=PDIG_59560 PE=3 SV=1
568 : M1C5M6_SOLTU 0.35 0.49 1 55 59 110 57 2 7 111 M1C5M6 DNA-directed RNA polymerase subunit OS=Solanum tuberosum GN=PGSC0003DMG402023468 PE=3 SV=1
569 : W6QZS7_PENRO 0.35 0.46 1 55 64 115 57 2 7 116 W6QZS7 DNA-directed RNA polymerase III subunit RPC10 OS=Penicillium roqueforti GN=RPC11 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 134 266 34
2 2 A S + 0 0 123 346 72
3 3 A H + 0 0 161 346 84
4 4 A M - 0 0 139 379 81 IIIIVVIIIV V L I
5 5 A E + 0 0 167 445 64 EEEEEEEEEEEEEEEEEE E E E
6 6 A Q - 0 0 127 476 72 QQQQQQQQQQQQQQQQQQ Q E E E E ED Q EEEE E
7 7 A D + 0 0 104 512 59 DDDDDDDDDDEDEDEEDD D G D D DD QDQN ED DDRD D
8 8 A L + 0 0 67 522 93 LVLLVVVLLILVLFVVFFLFLL V V I VV VVVA SI VVIVVI IVL
9 9 A K S S+ 0 0 215 538 75 KKKKKKTAAAAASSSSSSESEE NEE NE EE KD DDKDT AQ NNENKKKKNK
10 10 A T S S+ 0 0 78 545 71 TTTTTTTTTTTTTTTTTTTTTT TTT TT TT TTT TT ANTTTN GT TTTTTTGTTT
11 11 A L S S- 0 0 75 566 72 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLLLL LLLLLLLMLLLLL
12 12 A P - 0 0 87 570 62 PPPPPPPPPPPPPPPPPPPPPPpPPppPPPpPPPpPPPPpPPPPPPPPPpPPPPPPPKKKPPPPPPPPPP
13 13 A T E -A 27 0A 75 450 70 TTTTTTTKKKKKTTTTTTTTTTsTKtvTTKvTTTtTTTTtTTKKTKTTTvTTTTTTT...TTKTTTTTTT
14 14 A T E -A 26 0A 43 484 60 TTTTTTTVVVVVAAAAAATATTKTTRKTTTKTTIRIIITRTTVTIVITTKTTTTTTTGGGTTTTVTTTTT
15 15 A K E +A 25 0A 189 516 72 KKKKKKKKKKKKKKKKKKRKRRERKDTRRKTNRKEKKKSEKRKRKKRKRTKNNNKKSSSSKKRKKRKTKK
16 16 A I - 0 0 40 534 73 IIVVVVVIIIIIVVVVVVIVIIVIVVRIVARIAIVIIIIVAIKIIVIAVRYAAVAAVVVVAAVAKVVAAA
17 17 A T - 0 0 84 548 84 TTTTTTTTTTTTTTTTTTETEETEVIGEEVGEEETEEEETVETQDTELEGKKKKKIRRRRVVVVEVHIVI
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPEEEPPPPPPEPPPPPPPPPPPPPPPPPPPPPPPPP
20 20 A K T 4 S+ 0 0 148 570 62 KKKKKKKKKKKKKRKKKKKKKKKKKKKNKKKQKKKKKKQKKSKRKRKKKKEEEEEKERRREEYEKEKEEA
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A G < + 0 0 52 570 44 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKGGGGSGGGGGGGGGGGKGGGGGGGGGGGGGG
23 23 A N - 0 0 21 570 59 NNNNNNNNNNNNHHHHYYHYHHNNNHHNHNHNHHWNNNNWNNYHHNHNHHNNNNNNNNNNHHNHNNNNHH
24 24 A D S S+ 0 0 113 570 66 DDDDDDDDDDDDNNNNHHNHNTHMEDDMNEDGKTHDDDGHRMEDTNMRMDDNNNDKNDDDTTTTNRDRTN
25 25 A T E +A 15 0A 37 570 68 TTTTTTTEEEEEEEEEEEEEEEEEEEEEEEETEEEEEEMELEEEEEELEETTTTTETEEEEEEEEEREEE
26 26 A A E -AB 14 46A 0 570 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVVAAAAAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 YYYYYYYYYYYYYWWWWWYWYYYYYYYYYYYFYYYVVVFYFSYYVYYFSYYAAAYSYLLLSSYSYYYYSF
28 28 A W E + B 0 44A 93 570 21 WWWWWWWWWWWWWWWWYYWYWWYWVYFWWVFWWWYWWWWYWWFYWFWWWFWWWWWWWAVAWWWWWWWWWW
29 29 A W E - B 0 43A 68 570 82 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWYWWW
30 30 A E E - B 0 42A 134 570 79 EEEEEEEEEEEEEEEEEELELLMLMFVLLMVMMLMMMMMVLLVVMILLLVLLLLLLLMMMLLILLLMLLL
31 31 A M E - B 0 41A 81 570 77 MMMLMLMLLMLLLLLLVLQLQQIQQVQQQQQLQQLLLLLIQQQVLQQQQQRRRRRQRMMMQQRQQRQRQR
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTLLLLLTLTTTTTMTTLILTL
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
35 35 A A S S+ 0 0 89 570 36 AAAAAAAAAAAAAAAAAACACCACAAACCAASCCASSSSARCARSACRCASSSSARSAAASSASRASASA
36 36 A G S S+ 0 0 78 570 11 GGGGGGGGGGGGGGGGGGAGAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPAPSPPPPPPSPPSSSSSSSPPPAAPASSSSAS
40 40 A S S S- 0 0 54 570 80 SSSSSSSSSSSSSSSSSSESEEPEPPPEEPPTEEPTTTTPEEPPTPEEEPEEEEEEEPPPEEEEEEEEEE
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVTTTVTTTTTTTTTTVTVTV
42 42 A I E -B 30 0A 26 570 75 IIIIIIIIIIIIIIIIIIRIRRRRRRRRRRRQRRRQQQQRRRRRQRRRRRRRRRRRRRRRRRRRRRRRRR
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 YYYYYYYYYYYYFYYYYYYFYYYYYYYYYYYYYYFYYYYFLYYYYYYLYYFFFFFLFYYYFFYFFFFFFF
45 45 A K E -BC 27 52A 31 570 69 KRKKKKKKRRRRKKKKKKKKKKKKRKRKKRRRKRKRRRRKRKKKRRKRKKRKKKRRKRRRKKRKRRVRKR
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 TTTTTTTTTTTTKKKKKKKKKKVTTTTTKTTTKKTSSSTTTKATTTKTKTTTTTTTTTTTLLTLTTTTLT
48 48 A K S S+ 0 0 156 570 63 KKKKKKKKKKKKRKKKRRKRKKKKKRKKKRKKKKRKKKKKKKRKKRKEKKKKKKKKKKKKKKKKKKEKKK
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
50 50 A G + 0 0 34 570 47 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGRRRGGGGGGNGGGGGNGGGGGHGGGGGGGKGEGGG
51 51 A H - 0 0 71 566 64 HHYYHYHHYYYYYYYYYYHYHHHYYHHHHYHHHHHYYYHYQHYHHYHQHHFYYFNYYYYYHHKHYKHKHK
52 52 A T E +C 45 0A 40 566 72 TTTVVVVVTTTTVVVVVVTVTTTTTVTTTTTTTTTTTTTTTTVVTTTTTTTTTTTTTTTTTTTTTTKTTT
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
55 55 A S - 0 0 14 502 37 SAASASASSSSGSSSSSSESEEEEEEEEEEENEEENNNNEEEEENEEEEEEEEEEEEEEEEEEEEEEEEE
56 56 A Y 0 0 150 248 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY YYY
57 57 A E 0 0 184 205 46 EEEEEEEEEEEEEEEEEEDEDDED EEDD E DD DDED EDDDEDDDDDDD DD DDD DDD
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 134 266 34 EE E E E G E D DE
2 2 A S + 0 0 123 346 72 SS S S ND E V N E G GE E
3 3 A H + 0 0 161 346 84 DD D D KD E T E E D PE E
4 4 A M - 0 0 139 379 81 VVVVV V VV M V MMIVIMVM IE MVV V VL G M A VS M
5 5 A E + 0 0 167 445 64 EIIIII E AA E EEI E PPSASPEP PG PDI D EE E E P PDDE EP
6 6 A Q - 0 0 127 476 72 EEEEEE T DDDE E DEEEE D EEKKEDEKTK EE EQVEE V AQ E DGV PAEK DES
7 7 A D + 0 0 104 512 59 RNNNNNDDKDNNNN D NGERNDE EETTNTNTKTETK EGDNG D EE S DKDGE AEKI KGG
8 8 A L + 0 0 67 522 93 LVVVVVIVSVIAPVVIY VELLVVI LLGGDTDGSGILI IAVIE V ES H MIQTV GDLS VGA
9 9 A K S S+ 0 0 215 538 75 RDDDDDENVNIVVKKSK KEKRNSA KKVVAPAVVVQPKKKK AQSDEKS AA P GAGQARAKLA NAQ
10 10 A T S S+ 0 0 78 545 71 GTTTTTTTTTNNNTTGLTTSAGTTT AAQQTNTQTQTKTGGGGTKVTSGT PG T TTTTTGQGSP TTK
11 11 A L S S- 0 0 75 566 72 LLLLLLLLLLLLLLLLYLLHLLLLL LLLLLLLLLLLLLLLLLLILMNLLLLLLILKLLMLLILTV LLI
12 12 A P - 0 0 87 570 62 pPPPPPPPPPpppPPPpPPPppPPPPppTTPpPTPTPKPPPPePKPPPPPppPpKpPPVRPPTPIVPPPK
13 13 A T E -A 27 0A 75 450 70 tTTTTTTTTTvvaTTTdTTTdtSTTTdd..KvK.T.T.TTTTtT.VITTVttTt.tTT..TT.T...TK.
14 14 A T E -A 26 0A 43 484 60 RTTTTTTTTTKKKTITNATIERITTTEERRTKTRTRADTTTTIT.VTVTVESTE.EIA..ITKT...IA.
15 15 A K E +A 25 0A 189 516 72 ERRRRRKRNRTTTNKSEAKKSERRATSSGGRTRGNGVVQTTTKNGSRKTEDDTD.EASAGTEGTKE.TRG
16 16 A I - 0 0 40 534 73 VIIIIIVVEVRRRVVVVEAIVVIVIAVVIIIRIIEIVVIAAAIVVFIIAFQVAVIVIIEVTVVAIA.VVV
17 17 A T - 0 0 84 548 84 TEEEEETEVEGGGIIKEIIEITEERRIMSSTGTSVSKYKQQQDRIKEDQKKVRKEKKKKVKDTAER.RTL
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPPPPPPPPPPPPPPPPPEPPPPPEPPPPPPPPPPPPPPPPEPPEPEPEPPPPEPPPPPPPPPEPPPPP
20 20 A K T 4 S+ 0 0 148 570 62 KAAANNNKKKKKKAKEKKKKKRSKEEKKSSEKESKSKKKEEEKENNSKENDQEEKDNESSEEASKKKKAS
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A G < + 0 0 52 570 44 GGGGGGGGGGGGGGGGGDQGGGGGGGGGGGGGGGGGGGGDDDHGKGGGDGGGGGGGGDGKEDGDGGEEGK
23 23 A N - 0 0 21 570 59 YNNNNNFNNNHHHNNNNNNHHYNNNNHHNNHHHNNNNNNNNNNHNNNHNNNHNNHNHCHNCNNNHNHNYN
24 24 A D S S+ 0 0 113 570 66 HMMMMMTMDMDDDRKNKGRDAHMMNNAVDDTDTDDDKNNDDDQDDDMDDDQNNQDQGTLDTDDDGDPNTD
25 25 A T E +A 15 0A 37 570 68 EEEEEEKETEEEEELTGTLEGEEETTGGEEEEEETEEELQRQETEKEERKKEVKEKITEETREQEKRLEE
26 26 A A E -AB 14 46A 0 570 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAGAAAAAAAAAAAAAAAAVAAAAAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 YFFFFFYFYFYYYYFAYYFIHYYFFYHHYYYYYYYYSYFYYYVYYYFVYYYKYYVYEFYYYYYYVYYFYY
28 28 A W E + B 0 44A 93 570 21 YWWWWWWWWWVFVWWWFYWWWYWWWWWWFFYVYFWFWYWWWWCWFVWGWVWWWWWWWWSFWWFWWFFWYF
29 29 A W E - B 0 43A 68 570 82 WWWWWWWWVWWWWWWWWVWWMWWWWWMMWWVWVWVWWWWYYYWWWYWWYYWWWWWWWWKWWYWYWQMWNW
30 30 A E E - B 0 42A 134 570 79 ILLLLLLLLLVVVLLLSLLMLVLLLLLLIIIVIILILTLMMMSLIELMMEMTLMMMLLEMLMIMMIQLVI
31 31 A M E - B 0 41A 81 570 77 VQQQQQQQRQQQQRQRIRQLQVQQRRQQLLRQRLRLIMRQQQLRLLQFQLRVRRLRRRMVRQLQLVLRRL
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 TTTTTTTTTTTTTLTLTTTTTTTTLLTTTTTTTTTTTTLIIITLTTTTITLTLLTLLLLTLITITTTLTT
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
35 35 A A S S+ 0 0 89 570 36 ACCCCCSRGRAAAASSAGRSAACRSSAASSAAASGSGAAAAASSAACSSASSSSSSSASAASRASASSAR
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAAAAAAAAAGSAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PPPPPPASPSPPPSSSGPSPPPPSSSPPPPPPPPPPSPSSSSPSPPPPSPSPSSPSSSGPSSPSPPPSPP
40 40 A S S S- 0 0 54 570 80 PEEEEEEEEEPPPEEEEEETEPEEEEEEAAEPEAEAEPEEEEEEAAETEAEMEETEEESPEEPETPMEEP
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTVTTTTTTTTTTVTTTTTTTTTTTTTVTTTTVTTTTTTVTVVTVVVTTVTTTTTTVTT
42 42 A I E -B 30 0A 26 570 75 RRRRRRRRRRRRRRRRKRRQRRRRRRRRRRMRMRRRRRRRRRRRRRRRRRRQRRQRRRIRRRRRQRTRIR
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFIFFFFFFFFIFFFFFFFFFFFFFFFFIFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFIFFMF
44 44 A Y E -BC 28 53A 39 570 19 YYYYYYFFFFYYYFFFYFLYYYYFFFYYYYYYYYFYFYFFFFYFYYYYFYFFFFYFFFYYFFYFYYYFYY
45 45 A K E -BC 27 52A 31 570 69 KKKKKKKRERRKRRRKRERRIKKRKKIIKKRRRKEKRKKVVVRKKIKRVIRRRRRRRRTRRVKVRKKRRK
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 RKKKKKMTTTTTTTTTVTTTPRKTTIPPTTCTCTTTTTTTTTTVTTKQTTTVTTTTTTVTTTTTITCTCT
48 48 A K S S+ 0 0 156 570 63 RKKKKKERARKKKKEKKKEKKRKRKKKKKKKKKKaKKKEEEEKKKKKKERQKKQKEKASKAEKEKKnGKK
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCaCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCC
50 50 A G + 0 0 34 570 47 GSSSSSKKGKGGGGDGGGGQGGSKKSGGGGNGNGGGSGDEEENKGRSKERGGSGKGKGKGGEGESGGGNG
51 51 A H - 0 0 71 566 64 YHHHHHHHHHYHHKYFYHNYHYHYFYHHKKHYHK KLYHHHHYYKKHYHKKHNKNKHKHKKHKHHYHHNK
52 52 A T E +C 45 0A 40 566 72 VTTTTTVTKTTVTTTTTKTTRVTTTTRRVVTTTV VTVTKKKTTVVTTKVTTTTTTTTGTTSVKTSRTRV
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW WWWWWWWWWWYWWWYWWWWWWWWWWWWWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRNR
55 55 A S - 0 0 14 502 37 EEEEEEEEEEEEEEEEVEENEEEEEEEEEEQEQE EEEQEEEDEEEEDEEEEEENEEE EEEEESEDEQE
56 56 A Y 0 0 150 248 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYY Y Y YYYY YYYYYY YYYYYYYYY YY Y YY YYY
57 57 A E 0 0 184 205 46 EDDDDDDDQDEEEDDDDQD EDDDD EE E E EDED DE D N DN NDD ED E D E
## ALIGNMENTS 141 - 210
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A G 0 0 134 266 34 EEEEEE EE EE ED E D QD DEE EE D E
2 2 A S + 0 0 123 346 72 SS EEEEEE EE EE ES E VD VQ EEG GGDDD T
3 3 A H + 0 0 161 346 84 ED EEEEEE EE EE EQ E PD VQ ENE NNVVE T
4 4 A M - 0 0 139 379 81 V TL MMMMMM MM MM MA M ME SL VVV TFSST E
5 5 A E + 0 0 167 445 64 E ENDPPPPPPDPP PPEPPDDDDDDDDDDP D PD D QP S SSSSSEPDD DDDDP N SS
6 6 A Q - 0 0 127 476 72 K EQQASSSSSSSSS SSSVPAAAAAAAAAAS A AEQG DDKA S SSSSSDAEQ QQVAVEADDSS
7 7 A D + 0 0 104 512 59 E EDAEGGGGGGEGGEGGEGPEEEEEEEEEEGDE GKEG SDDG E DEGEEEEGGG GGDEGEDDDGG
8 8 A L + 0 0 67 522 93 E VANDAAAAAAAAANAAESTDDDDDDDDDDAID TVVSVIALT E MEEEEEYTLL LLDNAKDMAEE
9 9 A K S S+ 0 0 215 538 75 IEHRKKQQQQQQDQQSQQDQAKKKKRKKKKKQPKQQNANRNQGQETETTTTTTSQPP PPRRQNEKMTT
10 10 A T S S+ 0 0 78 545 71 TNPIPMGKKKKKKAKKGKKATQGGGGGGGGGGKTGTITTGTTVDKNSNNSSSSSSKTT TTGGVTGNSSS
11 11 A L S S- 0 0 75 566 72 LLLETELIIIIIIRIILIIRMILLLLLLLLLLIALVIMKLLHAGMVLVALLLLLSMTTLTTLLLEKAFLL
12 12 A P - 0 0 87 570 62 ApDpTSPKKKKKKPKKPKKPRVPPPPPPPPPPKAPTRPPPPPPPRDPDPPPPPPAKLEaSSPPKpPPqPP
13 13 A T E -A 27 0A 75 450 70 .d.d.TK......T..T..T.KTQTTTKKTKT.EQ..TTTTTTI.SESSEEEEEQ...k..TT.dTKkEE
14 14 A T E -A 26 0A 43 484 60 .KSS.IT......T..T..T.GTTTTTTTTTT.TT..IFTITTT.TTTTTTTTTT...T..TTGSATTTT
15 15 A K E +A 25 0A 189 516 72 .TDETRTGGGGGGEGGSGGEGSTTTTDTTTTTGET.GQAEARDDGADAEDDDDDDG..A..EESDEEQDD
16 16 A I - 0 0 40 534 73 .VAAAIAVVVVVVIVVAVVAVIAAAAVAAAAAVAA.VIIVVGAMVEAEAAAAAAEVAATVTVVVAVAAAA
17 17 A T - 0 0 84 548 84 QQVVYDHLLLLLLQLLQLLHVRQHQQEHHQHQLPHQSKKQKLRELPHPTLHKLIKMQKSRRHHTVITRII
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPPPEPPPPPPPVPPPPPPPPPPPPPPPPPPPPPPPPPPPYPPSPPPPPPPPPPPPQPDPDPPPEPDPP
20 20 A K T 4 S+ 0 0 148 570 62 iKKKEKESSSSSSESSESSESREEEEEEEEEESREvSKENNREQKKEKFEEEEEKNEEREEEEKKEYKEE
21 21 A C T 4 S- 0 0 58 569 0 cCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A G < + 0 0 52 570 44 GHKGDHGKKKKKKDKKDKKGKGDGDDDGGDGDKGGGKEEDGGGSGEGEGGGGGGSRGGYGGGGGRGGGGG
23 23 A N - 0 0 21 570 59 GENNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNFNNHNNNNNNHNHHNNNNNHNNHNHHNNHNNHHNN
24 24 A D S S+ 0 0 113 570 66 DFTKDQDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNNDGRDSDPDPGDDDDDTDNTGNNDDDSDGNDD
25 25 A T E +A 15 0A 37 570 68 KGGGTEREEEEEEREEREEREERRRRRRRRQREKSKELLQEERKERRRKRRRRRREKVEVVEEEGEEERR
26 26 A A E -AB 14 46A 0 570 38 AVAAAGAAAAAAAAAAAAAAVLAAAAAAAAAAAAAAAAAAALAAVAAAAAAAAAAVAAAAAAAVAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 YYYYYVYYYYYYYYYYYYYFYLYYYYYYYYYYYYYYYFFYFESTYYYYAYHYYYYFYYYYYYYYYWAFHH
28 28 A W E + B 0 44A 93 570 21 FWYYWWWFFFFFFWFFWFFWFAWWWWWWWWWWFFWFFWWWWWYWFFWFFWWWWWFFWWFWWWWFYYFFWW
29 29 A W E - B 0 43A 68 570 82 FELVYWYWWWWWWEWWYWWEWWYYYYYYYYYYWKYFWWWYWWETWMYMKYYYYYVWWWKWWYYWVTKTYY
30 30 A E E - B 0 42A 134 570 79 QALLMSMIIIIIILIIMIIMMMMMMMMMMMMMISMQILMLLMMEMQMQELMMLMQMMLQLLMMMLIEEMM
31 31 A M E - B 0 41A 81 570 77 LLKKQLQLLLLLLKLLQLLKVIQQQQQQQQQQLMQLLRRQRVKALLQLFQQQQQMLRRMRRQQMKKFIQQ
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 ITTTITITTTTTTITTITTITTIIIIIIIIIITIIITLLILMILTTITTTIITITTLLILLIITTTTIII
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRRRRRRRRRRRRRRRGRRRR
35 35 A A S S+ 0 0 89 570 36 SASAASSRRRRRRARRSRRSAASSSSASSSSSRSSSSASSSRASASSSSSASSSSASSSSSSSSSASSSS
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PPPPSPSPPPPPPSPPSPPSPPSSSSSSSSSSPPSPPSSSSASGPPSPPSSSSSPPSSPSSSSPPPPPSS
40 40 A S S S- 0 0 54 570 80 MEEEEEEPPPPPPEPPEPPEPPEEEEEEEEEEPEEMAEEEEEESPMEMAEEEEESPEEMEEEEMEPAAEE
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTVVTVTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 TRKARRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRTRRRRRRRIRTRTLRRRRRIRRRTRRRRRKRLLRR
43 43 A F E -BC 29 54A 50 570 7 FFFIFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFKFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 YYYYFYFYYYYYYFYYFYYFYYFFFFFFFFFFYYFYYFFFFYFYYYFYYFFFFFYYFFYFFFFYYFYFFF
45 45 A K E -BC 27 52A 31 570 69 KTTTVRVKKKKKKTKKVKKTRRVVVVVVVVVVKRVKKRKVRRTCKKIKKIIIIISKKKKKKVVRTKRKII
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 VTAATITTTTTTTTTTTTTTTTTTTTTTTTTTTLTCTTVTTTTTTCTCLSTTSTITTTCTTTTKATLCTT
48 48 A K S S+ 0 0 156 570 63 KHSKEKEKKKKKKEKKEKKERKEEEEEEEEEEKKEKKEKEnKEKRnEnnEEEEEKKKKnKKNEREEnKEE
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCcCccCCCCCCCCCcCCCCCCCcCCC
50 50 A G + 0 0 34 570 47 SGGGGNEGGGGGGGGGEGGGGGEEEEEEEEEEGEEGGGGENGERGGEGKEEEEEHGSGQGSEERAGQGEE
51 51 A H - 0 0 71 566 64 HHHHHFHKKKKKKHKKHKKHKYHHHHHHHHHHKFHHKHYHHNHHKHHHKHHHHHHKYAFLAHHYHHKNHH
52 52 A T E +C 45 0A 40 566 72 QRRRKTKVVVVVVKVVKVVKTTKKKKSKKKKKVTKRVTTKTTKRVRKRQKKKKKIVTTQTTRRTRRQTKK
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWYWWWWWWWWWWWWWWWWWWWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRRRRRRTRRRRRRRRRRRRRRR
55 55 A S - 0 0 14 502 37 EEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEE E EDEDEEEEEEEEEDDEEEEEEEEEEE
56 56 A Y 0 0 150 248 0 YYY Y YYYYYY YY YY YY Y YYY Y Y YYY YY YYY
57 57 A E 0 0 184 205 46 EEEEEE EE EE EA E EDD D E EDD DD A N
## ALIGNMENTS 211 - 280
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....2....:....3....:....4....:....5....:....6....:....7....:....8
1 1 A G 0 0 134 266 34 E E EQ E Q Q D EE E EEEEEE E E G Q E D E
2 2 A S + 0 0 123 346 72 T IDID ITDVDDEDDTDD DIIDDDDND A SDSSSDTT S E K D T DDI DD E IQ
3 3 A H + 0 0 161 346 84 V MAMT MKAIVVIATKIE IMMAAAAIV T QNDDDASS S D G V K VAI TD F IE
4 4 A M - 0 0 139 379 81 I AVAS AMVVSKSVSAST SAAVVVVNS Q LVAEEAEE P L I S V SVE SKIL EV
5 5 A E + 0 0 167 445 64 EEDSDSE SHDSDKEDDHDPSDSSDDDDED EE DSDNNNDDD D EEA D H DDSDEEDE SD
6 6 A Q - 0 0 127 476 72 DNAVMVV VDVSADAIVSAMGAVVIIIVEA ER DEQAAAEAA AQDKE A Q AVSVVQDQE SG
7 7 A D + 0 0 104 512 59 DEQEDNDEDDSNEEDDNDGEGDEDDNNNNKQENENQNTNNNGAADDDDEKEKDQDEGEQNGDDNQQN EE
8 8 A L + 0 0 67 522 93 PYPDLNLAELENENIRNVEDAKDLLNNNNVDMMSVELAFFFKDDPPPFAHVEPDPVDIDNENAFYGV EQ
9 9 A K S S+ 0 0 215 538 75 KSARKKKESKAKTRPQKESQQGQKKKKKKSRKARDSEAEEEPEEKKKEKKNTKRKNENKKTAENSRD TD
10 10 A T S S+ 0 0 78 545 71 DSTGRNRDGRANSGKTNDAGVTGRRNNNNTGSQTSTNQGGGTGGDDDGAHAIDGDAAAGNSDDQSTS SG
11 11 A L S S- 0 0 75 566 72 MSLLFMFMMFLMLLGEMMLLLMLFFMMMMFLAMITRLCKKKVKKMMMKIKEYMLMELELMLIMKSRILLR
12 12 A P - 0 0 87 570 62 PAPPvSvgrvLSPPPVSgLPKVPvvSSSSKPPeQPPaPpppEPPPPPpSkpsPPPpLpPSPggkAADaPA
13 13 A T E -A 27 0A 75 450 70 DQKShKhtthLKETEIKtKT..ThhKKKK.TKe..Tk.aaa.TTDDDa.tdaDTDdKdKKEttkQT.kET
14 14 A T E -A 26 0A 43 484 60 GIATTTTTVTVTTTTITTVTG.TTTTTTTTTTS..CI.TTT.AAGGGTTLSKGTGSVSTTTTTIIV.TTV
15 15 A K E +A 25 0A 189 516 72 MDTKGQGDRGTQDEEKQGTGSDEGGQQQQKSAD..DM.DDD.EEMMMDTKEGMSMDTDTQDKGKED.ADE
16 16 A I - 0 0 40 534 73 LEETIAIAEIEAAVAHAAEAVEAIIAAAANVVTVGKA.IIIIVVLLLVFQAVLVLAEAVAAAASEDVTAE
17 17 A T - 0 0 84 548 84 QKEFQVKHIQKVKHPTVIRSSKSQKVVVVLVTEDREI.VIVEAEQQQITEVKQVQVKVVVHIREKDVSHN
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCICCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 GPPPKPKPPKPPPSPEPPPPPPPKKPPPPRPQPEPPPDDDDEDDGGGDAPPPGPGPPPPPPPPPPPNPPP
20 20 A K T 4 S+ 0 0 148 570 62 KKAEKKKEKKSKEERNKESEKAEKKKKKKKDRKKKSTSEEEEEDKKKEKDKKKDKVEVSKEKEQKKSREK
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A G < + 0 0 52 570 44 KSHGKTKGGKGTGGGGTGGDGGDKKTTTTGDNGDEgNGGGGGGGKKKGKGHSKDKHGHETGGGGGGINGN
23 23 A N - 0 0 21 570 59 SHNNQHQNHQHHNNHNNNHNHHNQQNNNHNNHQAHeNNNNNNNNSSSHEHHSSNSHHHNHNHNYHNHHHN
24 24 A D S S+ 0 0 113 570 66 RTRDEDEDDEMDDDDDDDDDDMDEEDDDDNDGKKPTNDQRQDDDRRRDSDVERDRTMMDDDDEHNHDGDH
25 25 A T E +A 15 0A 37 570 68 KRERTETRRTEEREKEEREREKRTTEEEEEEEKEREEKEEELRRKKKKKTGEKEKGEGKERVRTRGRERE
26 26 A A E -AB 14 46A 0 570 38 TAAAVAVAAVAAAAAVAAAAVAAVVAAAAAAAIVAHAAAAAAAATTTAVLAVTATAAAAAAAAMAMAAAA
27 27 A Y E -AB 13 45A 38 570 67 SYYYVYVFSVYYYYYKYFYHYFHVVYYYYFHYITYEYYWWWWWWSSSWSYYVSHSYYYHYHRFYYEYYYK
28 28 A W E + B 0 44A 93 570 21 YFWYRFRWYRSFWWFFFWSWFYWRRFFFFVWFSWFWFFYYYYYYYYYYYFYYYWYYSYWFWYYFFYFFWY
29 29 A W E - B 0 43A 68 570 82 YVVYLYLEELKYYYKYYEKYWKYLLYYYYHYKWAMWYFTTTTTTYYYTSWLFYYYLKLYYYEEWVYLKYS
30 30 A E E - B 0 42A 134 570 79 EQLMESEMLEESMMTTTMEMMEMEETTTSTMQTEQMSQLLLIIIEEEIQTLTEMELELMSMMMTQTQQMT
31 31 A M E - B 0 41A 81 570 77 MMRQKMKKLKMLQQMMLKMQMMQKKLLLLIQMEMIEILKKKKKKMMMKAVKLMQMKMKQLQKKVMRVMQL
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 TTTITITITTLIIIILIILITTITTIIIILIITLTTIITTTTTTTTTTTTTTTITTLTIIIIITTLTIIM
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRAAAGGGRRRGRRRRRRRRRRRRRRRRRRRRRR
35 35 A A S S+ 0 0 89 570 36 SSGSSSSASSSSSSSSSASASSASSSSSSSSSSSSASSSSSSSSSSSSSSSASSSSSSSSSSASSSSSAS
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAAAAAAAAAAAVAAAAAAAAAAAAASAASAAAAAAAAAAAAAAASAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PPPSAPASAAGPSSPGPSGSPGSAAPPPPGSPPGPPPPPPPPPPPPPPPGPAPSPPGPSPSSSGPGPPSG
40 40 A S S S- 0 0 54 570 80 MSEETSTEPTSSEEESSESEMAETTSSSSQEMPSMASMPPPPPPMMMPLSEEMEMESEESEEESSQMMEQ
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 VIRRILIRRIIIRRRVIRIRRIRIIIIILVRTRITRNTRRRRRRVVVRTVKIVRVKIKRLRRRVTIVTRI
43 43 A F E -BC 29 54A 50 570 7 FKIFEFEFFELFFFFFFFLFFFFEEFFFFFFIFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFKFFFFF
44 44 A Y E -BC 28 53A 39 570 19 AYFFYYYFFYYYFFYYYLYFYYFYYYYYYYFYYYYYYLFFFFFFAAAFCYYYAFAYYYFYFFFYYYYYFY
45 45 A K E -BC 27 52A 31 570 69 KSEITITTTTTIIVRTITTIRTITTIIIIEIRKSKETKKKKKKKKKKKEETKKIKTTTIIITTESEKRIE
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 HMTTSISTESAITTVLVTVTKATSSVVVVTTCVSCRTVTTTTTTHHHTTQALHTHEVETITVTAMPCCST
48 48 A K S S+ 0 0 156 570 63 SKRESKSEKSKKEEKKKESERDESSKKKKKEkNKnEKKEEEEEESSSEVDAKSESSNSEKEEEDKNNrEK
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCC
50 50 A G + 0 0 34 570 47 GHAEGNGDHGKNEEENNEGERKEGGNNNNGEQSGGGKGGGGGGGGGGGGKGGGEGGKGENEDEKRGGQEG
51 51 A H - 0 0 71 566 64 SHHNHHHHHHHHHHQHYHHHYHHHHYYYHTHHYHHNKHHHHHHHSSSHHFYYSHSHHHHHHHHHH HLHH
52 52 A T E +C 45 0A 40 566 72 RIKRRHRKKRGHKRTKHKGKTGKRRHHHHKRETRRVRQRRRRRRRRRRRKRTRRRRGRRHKKKTI REKV
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWW WWW WHWWWWWWWWWWWWWFWWWWWWWWWWWWWYW WWWW
54 54 A R E -C 43 0A 113 544 27 KTRRRKRRRRRKRRRNKRRRRKRRRKKKK RRR RKRRRRRRRRKKKRK RRKRKRRRRKRRRTT RRRS
55 55 A S - 0 0 14 502 37 SEEE E EG EEEETEE EE E EEEE EEE DEEEGGGGGGQQQG EEQEQE EEEEEEQE EDE
56 56 A Y 0 0 150 248 0 Y Y Y Y Y YYYYYY Y YY Y Y
57 57 A E 0 0 184 205 46 Q D A D NNN S E
## ALIGNMENTS 281 - 350
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....9....:....0....:....1....:....2....:....3....:....4....:....5
1 1 A G 0 0 134 266 34 EEEEEEE EE E EEEEEQEEQ QQ ESEEEEQDQGEEEEEEEEEEEEEEEEE
2 2 A S + 0 0 123 346 72 VVIIIVID DDDDDDIID DT S PSSSSTSAT QQ TTPSSVQDQQSTSISVSSSSSVSSTSS
3 3 A H + 0 0 161 346 84 IIIIIIIT TTTTTTIIT TS S ISSSDKSVK KK EVIDDIKIKKSESIDIDDDSSIDDEDD
4 4 A M - 0 0 139 379 81 EEEEEEES SSSSSSEES SE T FEEEEVPVL VV EQFEEEVPVMEEEEEEEAEEEEEEEEE
5 5 A E + 0 0 167 445 64 SSSSSSSDEDEEEEEESSE EDE GA SDEDNHDTH AADGASNNSATAGDNDSNSNNNDDSNNNNN
6 6 A Q - 0 0 127 476 72 SSSSSSSVVVVVVVVVSSVEVAG AD EAAAADAKD EEDAREAASEAENAAASASAAAAASAAAAA
7 7 A D + 0 0 104 512 59 GEGGGDGSDDDDDDDDGEDADNSDSEDDDDNNNNADDADKKDNEDNNEKAKRNDNGNGNNNNNENNDNND
8 8 A L + 0 0 67 522 93 EEEEEEEADNAAAAAAEEAIAFDPTMSSSDFFFFNFDNSTTEFSDFFETETTFFFEFEFFFFFEFFFFFN
9 9 A K S S+ 0 0 215 538 75 TTTTTTTEAAEEEEEETTEKEEAKDKQQQMEEEEEEIDQSSAERMEETSTSNEEETETEEEEETEEEEEA
10 10 A T S S+ 0 0 78 545 71 SSSSSSSDEDDDDDDDSSDSDGQDQSGGGTGGGGGGPAGQQEGTTGGSQEQQGGGSGSGGGGGSGGGGGE
11 11 A L S S- 0 0 75 566 72 LLLLLLLMIIMMMMMMLLMAMKLMLATTTNKKKKLKTLTLLGKINKKLLALLKKKLKLKKKKKLKKKKKI
12 12 A P - 0 0 87 570 62 PPPPPPPgggggggggPPgPgPKPVPQQQappppLpaLQYYPpQappPYPYKpppPpPpppppPpppppg
13 13 A T E -A 27 0A 75 450 70 EEEEEEEtttttttttEEtKtT.D.K...saaaaKaeK...Ia.saaE....aaaEaEaaaaaEaaaaat
14 14 A T E -A 26 0A 43 484 60 TTTTTTTTTTTTTTTTTTTTTAVG.T...TTTTTVDTV...VK.TTTT....TTTTTTTTTTTTTTTTTT
15 15 A K E +A 25 0A 189 516 72 DDDDDDDDTKGGGGGGDDGEGETM.A...EDDDDTDET...SD.EDDD....DDDDDDDDDDDDDDDDDT
16 16 A I - 0 0 40 534 73 TAAAAAAAVAAAAAAAAAAAAEEL.V...AVIVVEIAE...RIVAVVA....VVVAVAVVVVVAVVVVVA
17 17 A T - 0 0 84 548 84 HNIIIHHRKIRRRRRRHNRTRTKQ.T...TIIIIKIPK.KKKVDTVVHK.K.VRVLVHIVVVVHVVRIVI
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPPPPPPPPPPPPPPPPPPPPPGPQPPPPDDDDPDPPPPPPDEPDDPPPPGDDDPDPDDDDDPDDDDDP
20 20 A K T 4 S+ 0 0 148 570 62 EEEEEEEEEKEEEEEEEEEREEEKRRaaaFEEEEEEREaNNKKKFEEENRNKEQEEDEEDEEEEEEQEEK
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A G < + 0 0 52 570 44 GGGGGGGGGGGGGGGGGGGCGGGKKNDDDGGGGGGGGGDKKGGDGEGGKGKGGGGGGGGGGGGGGGGEGE
23 23 A N - 0 0 21 570 59 NNNNNHNNHHNNNNNNHHNFNHHSAHGGGHNANNHHHHGQQNHAHNTHQHQKTTTHNNNNNTTHTTTNNH
24 24 A D S S+ 0 0 113 570 66 DDDDDDDDDDEEEEEEDDEGEDMRRGDDDGQEQQMGDMDRRDGKGQQDRDRNQEQDQDQQQQQDQQEQQD
25 25 A T E +A 15 0A 37 570 68 RRRRRRRRRVRRRRRRRRRQRTEKDERRRKEEEEEEKERMMKEEKEERMKMDEEEREREEEEEREEEEEV
26 26 A A E -AB 14 46A 0 570 38 AAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAACCMAVAAAACACVAAAAAAAAAAAAAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 HYHHHYHFRRFFFFFFYYFYFWFSSYYYYAWWWWYWYFYTTSWTAWWYTYTEWWWYWHWWWWWYWWWWWR
28 28 A W E + B 0 44A 93 570 21 WWWWWWWWYYYYYYYYWWYYYYSYYFFFFFYYYYSYFSFYYYYWFYYWYFYYYYYWYWYYYYYWYYYYYY
29 29 A W E - B 0 43A 68 570 82 YYYYYYYEEEEEEEEEYYEFETKYTKYYYKTTTTKTKRYRRATSKTTYRKRYTYTYTYTTTTTYTTYTTE
30 30 A E E - B 0 42A 134 570 79 MMMMMMMMMMMMMMMMMMMQMIEEEQQQQELLLLEISEQEETIEELLMESEELILMLMLLLLLMLLILLM
31 31 A M E - B 0 41A 81 570 77 QQQQQQQKKKKKKKKKKQKMKKILVMLLLFKKKKAKMMLVVLKMFKKQVMVVKQKQKQKKKKKQKKQKKK
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 IIIIIIIIIIIIIIIIIIIIITMTTIIIITTTTTLTILITTLTLTTTITITLTTTITITTTTTITTTTTI
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRRRRRRGRRRRRRRRAAAARGRRRRRRGRRAARRRRRAAARARAAAAARAAAAAR
35 35 A A S S+ 0 0 89 570 36 SSSSSSSASSAAAAAAAAASASSSSSSSSSSSSSSASSSAASASSSSSASAASSSSSSSSSSSSSSSSSS
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAAAAAAAAAAAAAAAASAAAAAAAAAAAAAAALLAAAAAAALALAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 SSSSSSSSSSSSSSSSSSSPSPGPPPPPPPPPPPGPPGPPPGPGPPPSPPPPPPPSPSPPPPPSPPPPPS
40 40 A S S S- 0 0 54 570 80 EEEEEEEEEEEEEEEEEEEMEPSMMMMMMAPPPPSPESMSSQPSAPPESESMPPPEPEPPPPPEPPPPPE
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 RRRRRRRRRRRRRRRRRRRTRRIVITTTTLRRRRIRRITIIVRILRRRIRIVRRRRRRRRRRRRRRRRRR
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFFFFFFFFFFFFFFFLFFIFFFFFFFFFFFFFFFFFFFFFFFFFIFFFFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 FFFFFFFFFFFFFFFFFFFYFFYAAYFFFYFFFFYFYYFCCFFYYFFFCYCAFFFFFFFFFFFFFFFFFF
45 45 A K E -BC 27 52A 31 570 69 IIIIIIITTTTTTTTTIITMTKTKSRKKKKKKKKTKRTKTTTKRKKKITRTTKKKIKIKKKKKIKKKKKT
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 TTTTTSTTVVTTTTTTSSTATKVHKCTTTLTTTTVKLVTKKTKSLTTSKLKITTTSTTTTTTTSTTTTTV
48 48 A K S S+ 0 0 156 570 63 EDEEEEEEEEEEEEEEEEEnEEAAKkTTTnEDEEKEKKTKKKEKnEEEKKKKEEEEEEEEEEEEEEEEEE
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCcCCCCCcCCCcCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCC
50 50 A G + 0 0 34 570 47 EEEEEEEEGDEEEEEEEEEQEGRGGQGGGKGGGGKGEKGGGKGGKGGEGDGGGGGEGEGGGGGEGGGGGD
51 51 A H - 0 0 71 566 64 HYHHHHHHHHHHHHHHHHHKHAHAKHAAAKHNHHFHFYAHHFHHKHHHHFHHHHHHKYKKKHHHHHHHKH
52 52 A T E +C 45 0A 40 566 72 KKKKKKKKKKKKKKKKKKKQKRGRRERRRQRRRRGRTGREEKRKQRRKETERRKRKRKRRRRRKRRKRKK
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFF WWWWWWFWFWWWWWWWWWWWWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRRRRRRR RTRRRR R RRRRRRRRRRRRRRRRRRR
55 55 A S - 0 0 14 502 37 EEEEEEEEEEEEEEEEEEEEED QAEEEEEGEGG GE E GQEGGE E QGGGEGEGGGGGEGGGGGE
56 56 A Y 0 0 150 248 0 Y YYYY Y Y YY YYY Y YYYYY YYYYY
57 57 A E 0 0 184 205 46 S NNNN S N NN NNN N NNNNN NNNNN
## ALIGNMENTS 351 - 420
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....6....:....7....:....8....:....9....:....0....:....1....:....2
1 1 A G 0 0 134 266 34 QDDQQQQEEEEDD D G E EEQ D DSQGDDD DDEDQADDDDDDDEED
2 2 A S + 0 0 123 346 72 D QDDQQQQTVSTEE DSD A T ADD S THT KDDDDEGADA DDKDEADDDDDDEDTD
3 3 A H + 0 0 161 346 84 M KIIKKKKEISSII EDV D S HAA I SVK IAAVARDVVV VVVVHAVVVVVVHISV
4 4 A M - 0 0 139 379 81 S VPPVVVVEEEEFF EEL A E IVV A EVV LVVLSMSLLL LLMIMLLLLLLLQIEL
5 5 A E + 0 0 167 445 64 EAATTAAAAGSEDEE D ETGEEEWEEED EGDDEK DSHEEGDDGSTAGGG GGSDTGGGGGGGEGDG
6 6 A Q - 0 0 127 476 72 VQEAAEEEEVSAAKK E AAGEEEKEEEA EGMMAN AKATTEMMGMEKEGE GGEDEDGGGGGGASAG
7 7 A D + 0 0 104 512 59 DEKAAKKKKNGNAPPENEDEDKKKNKKKADDKDNNDEEAEAQQDNNGDNEEGE GGVENDGGGGGGSSNG
8 8 A L + 0 0 67 522 93 DETEETTTTFEFSSSLLLRYDLLLVLLLDPPLLNNELVSDNKKENNWPRMQWQ WWTARNWWWWWWRTFW
9 9 A K S S+ 0 0 215 538 75 AKSTTSSSSETEEGGEKEGESNNNDNNNEKKNDKKGKSEIEEEYKKDEPMWDWKDDGNPKDDDDDDGEED
10 10 A T S S+ 0 0 78 545 71 EAQEEQQQQGSGGEEDFDAGWDDDSDDDGDDDTNNADAGPDEEKNNNNVDKNKDNNPWVPNNNNNNAGGN
11 11 A L S S- 0 0 75 566 72 IILAALLLLKLKKLLGVGVKGLLLTLLLKMMLKMMIGEKTLAAYMMVMIMNVNVVVASIQVVVVVVKLKV
12 12 A P - 0 0 87 570 62 gSYPPYYYYPPpPggASAIpNpppEpppPPPpASSIApPaLAAaSSDPDTaDaQDDrEDeDDDDDDASpD
13 13 A T E -A 27 0A 75 450 70 t........TEaTffT.T.aQiiv.iviTDDv.KK.IdTeKTTtKKQD..kQkQQQtT.tQQQQQQ.MaQ
14 14 A T E -A 26 0A 43 484 60 TT.......ETSAEEI.I.STEEE.EEEAGGE.TT.ISATVIICTTTG..TTTTTTVV.ITTTTTT.TKT
15 15 A K E +A 25 0A 189 516 72 TT.......EDDEAAK.KDDPWWW.WWWEMMW.QQKNDEETDDNQQKM.EEKEEKKEE.KKKKKKKPDDK
16 16 A I - 0 0 40 534 73 VM.......TAVEIIE.EEVAKKKAKKKVLLK.AAEEAEAEEEKAATLEAITIATTETEETTTTTTAAVT
17 17 A T - 0 0 84 548 84 NTK..KKKKRLVTDDKKKKTPAAPTAPAEQQPQIIKKVTPKKKNIIQTTDIQIVQQTKTKQQQQQQSRTQ
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PNPPPPPPPDPDPPPPGPPEPRRRPRRREGGRPPPPPPPPPPPIPPPGPPEPEPPPPGPPPPPPPPPPDP
20 20 A K T 4 S+ 0 0 148 570 62 NKNRRNNNNDEDERRQkQEEKAAAKAAAEKKAKKKQKREREKKKKKnKKKKnKannKKKGnnnnnnKQDn
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCcCcccCCCCccccccCCCc
22 22 A G < + 0 0 52 570 44 GKKGGKKKKGGGGGGGGGGGEKKKEKKKGKKKGTTGAHGGGGGDTTGKHHGGGDGGGDHGGGGGGGSDGG
23 23 A N - 0 0 21 570 59 HQQHHQQQQHHNHHHNSNHHHNNNHNNNASSNHHHHNHHHHNNSHHGSHHYGHSGGNHHNGGGGGGHHNG
24 24 A D S S+ 0 0 113 570 66 DSRDDRRRRDDQGGGEEEGGPTTTDTTTERRTRDDDDKGDMDDDDDERGNNENNEEPNGDEEEEEETAGE
25 25 A T E +A 15 0A 37 570 68 RRMKKMMMMEREERREEEKEMEEEREEERKKEEEEEKGEKEQQKEESKQRSSSRSSEKQESSSSSSERKS
26 26 A A E -AB 14 46A 0 570 38 AVCAACCCCAAAAAAMVMMAAYYYAYYYATTYSAAMMAAAAMMAAAATAAAAAAAAMAAMAAAAAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 RATYYTTTTYYWWLLQSQYWHFFFYFFFWSSFTYYQHRWCYTTLYYYSYSYYYYYYDYYNYYYYYYYFWY
28 28 A W E + B 0 44A 93 570 21 YYYFFYYYYYWYYFFYFYFYFYYYFYYYYYYYYFFYYYYFSFFFFFFYYYFFFFFFYFYFFFFFFFFFYF
29 29 A W E - B 0 43A 68 570 82 ETRKKRRRRTYETKKHVHKNMRRRMRRRTYYRKYYHHVTKKHHMYYFYAVMFMKFFYQSHFFFFFFYFTF
30 30 A E E - B 0 42A 134 570 79 MQESSEEEEFMLIEETETTIEQQQQQQQIEEQESSTTLISETTESSQESQQQQQQQTMSTQQQQQQEEIQ
31 31 A M E - B 0 41A 81 570 77 KAVMMVVVVKKKKVVLLLAKLLLLILLLKLLLKLLLLKKMALLLLLLMMQILIMLLLFILLLLLLLIMKL
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 ITTIITTTTTITTTTLTLTTITTTITTTTTTTMIILLTTILLLTIIITMTIIIIIILTMLIIIIIIITTI
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRARAGRRRRRRGRRRRRRRRGRRRRRRRRRGRRRRRRRRRRRRRRRRRRRRRRRRRRRRRGR
35 35 A A S S+ 0 0 89 570 36 ASASSAAAASSSSSSSSSSASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
36 36 A G S S+ 0 0 78 570 11 AALAALLLLAAAAAAAAAAAAAAAAAAAASSAAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 SPPPPPPPPPSPPAAGPGGPPPPPPPPPPPPPGPPGGPPPGGGPPPPPGPPPPPPPGPGGPPPPPPPPPP
40 40 A S S S- 0 0 54 570 80 EMSEESSSSPEPPTTAMAQPMIIMSIMIPMMMASSAAEPESSSMSSMMQSMMMMMMQMQTMMMMMMMMPM
41 41 A T E -B 31 0A 7 570 8 TTTSSTTTTTTTTTTTTTTTTTTTSTTTTSSTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 RTIRRIIIIRRRRVVVIVIRITTTLTTTRVVTLLLVVKRRIVVILLTVIVTTTTTTVQIVTTTTTTAVRT
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFIFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 FCCYYCCCCFFFFYYYYYYLYYYYFYYYFAAYYYYYYYFYYYYYYYYAFYYYYYYYYFFYYYYYYYYYFY
45 45 A K E -BC 27 52A 31 570 69 TETRRTTTTKIKKQQTKTDRKIITKITIKKKTSIITTTKRTEEEIIKKECKKKRKKEKEDKKKKKKCCKK
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 VTKLLKKKKVSTQVVPIPMKAKKKCKKKTHHKLVVTTEQLVPPIVVVHCEAVAVVVKCCPVVVVVVCETV
48 48 A K S S+ 0 0 156 570 63 ENKKKKKKKEEDDLLKRKKEnKKKnKKKEAAKnNNKAEDKRRRKNNNTSKnNnkNNKKNKNNNNNNNEEN
49 49 A C S S- 0 0 58 562 0 CCCCCCCCCCCCCCCCCCCCcCCCcCCCCCCCcCCCCCCCCCCCCCCCCCcCcqCCCCCCCCCCCCCCCC
50 50 A G + 0 0 34 570 47 DGGEEGGGGGEGGEEAKASGGSSNQSNSGGGNKNNHGGGEKGGKNNGGGNGGGEGGGGGGGGGGGGRKGG
51 51 A H - 0 0 71 566 64 HNHFFHHHHHHYNHHYKY YFKKKHKKKHAAKHYYYYYNFFYYAYYHSHHYHYHHHHHHYHHHHHHFHNH
52 52 A T E +C 45 0A 40 566 72 KRETTEEEERKRRNNKVK TQTTTQTTTRRRTTHHKRRRTGKKNHHRRKKQRQARRKQKKRRRRRRRKRR
53 53 A W E -C 44 0A 49 556 4 WWFWWFFFFWWWWWWFWF WWYYYWYYYWWWYWWWFFWWWWFFWWWWWYWWWWRWWFWYFWWWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RK RR RRRRRRRKR RKKKKRKKKRKKKRKKRRRRRRSSKKKKKRNRKRAKKSKRSKKKKKKRSRK
55 55 A S - 0 0 14 502 37 E EE KEEDQQTET EE E GQQ QEETTEDE TTEEEEQTDDEDEEE ETQEEEEEEEEEE
56 56 A Y 0 0 150 248 0 Y YY Y Y YY Y
57 57 A E 0 0 184 205 46 N NN K S N N
## ALIGNMENTS 421 - 490
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....3....:....4....:....5....:....6....:....7....:....8....:....9
1 1 A G 0 0 134 266 34 DEAEEDAQDQ EEEEEEEEEESD QDEDADDEA QDQEEEEAQEEEEEAD DD Q E NQ Q
2 2 A S + 0 0 123 346 72 DKASKDGQATAKVSSSTTTTTDA EAKAADAKA ATDQTTTTAEKKKKKADAAAAEEARAAEDAAAQAQD
3 3 A H + 0 0 161 346 84 VVASAVEIVLMVISSSEEEEEAV IVVVSVVAA MLVKSEEEARVVVVVSVMMMMEEMKMMNLEMMTMAR
4 4 A M - 0 0 139 379 81 LMLETLAELTVMEEEEEEEEESL SLMLILLTL VTLVAEEELMMMMMMILVVVVMMVMVVVIRVVVTVQ
5 5 A E + 0 0 167 445 64 GSGERGARGEATSEEEGGGGGSGAEGSGGGGRG AEGAAGGGGTSSSSSGGAAAAFFAQGADEGAATADK
6 6 A Q - 0 0 127 476 72 GEDADGKGEDQESAAAAAAAAMEQGEEENGEDDEQDGEATAADEEEEEENGQQQQKKQKQKSEQQQAVKA
7 7 A D + 0 0 104 512 59 GVDNEGGDEDAVENNNNNNNNDEEDEVEDGEEDEADGKNSNNDNVVVVVDGAAAQNNANPATQHQQSEND
8 8 A L + 0 0 67 522 93 WTNFLWRLQMETEFFFFFFFFPQEMQTQNWQLKVEMWTFFFFQRTTTTTNWEEEEAAEEEEAKMEEEEIA
9 9 A K S S+ 0 0 215 538 75 DGKEGDDQWQRGTEEEEEEEEAWKQWGWKDWGKSRQDSEEEEKPGGGGGKDRRRRDDRGRREVKRRNKNA
10 10 A T S S+ 0 0 78 545 71 NPPGPNPNKTSPSGGGGGGGGDKATKPKPNKPPASTNQGGGGPVPPPPPPNSSSSKKSPSSPQKSSNATD
11 11 A L S S- 0 0 75 566 72 VAQKGVVENDIALKKKKKKKKMNIDNANKVNGQEIDVLKKKKQIAAAAAKVIIIILLIVIVWLAIIQIEG
12 12 A P - 0 0 87 570 62 DrepPDAAaASrPppppppppPaSAaraeDaPepSADYppppeDrrrrreDSSSSPPSVSSPSTSSASAP
13 13 A T E -A 27 0A 75 450 70 QttaTQ.TkT.tEaaadaaaaDk.VktktQkTtd.TQ.adsat.ttttttQ...........KT..T.TI
14 14 A T E -A 26 0A 43 484 60 TVITIT.ITITVTTTTKTNNTGTTITVTITTIISTIT.DDSTI.VVVVVITTTTK..T.KT.VDKKVTIV
15 15 A K E +A 25 0A 189 516 72 KEKDEKQKERSEDDDDSDDDDMETKEEEKKEEKDSRK.DSDDK.EEEEEKKSSSS..SESS.NQSSKTSS
16 16 A I - 0 0 40 534 73 TEEVVTEVIQLEAVVVVVIIILIFQIEIETIVEALQT.VVVVEEEEEEEETLLLLVVLRLL.KFLLEFER
17 17 A T - 0 0 84 548 84 QTKVDQKTITTTHIVINTVVVTIVPITIKQIDKITTQKTVHVKTTTTTTKQQQQQQQQKQQ.TQQQTTTK
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPDVPQTEEGPPDDDDEDDDSEGEEPEPPEVPPGEPPEDEEPPPPPPPPPGGGGPPGSGG.EGGGPGPP
20 20 A K T 4 S+ 0 0 148 570 62 nKGEKnKEKKKKEEEEDEEEEKKKKKKKGnKKGRKKnNDDKAGKKKKKKGnKKKKssKKKKKKKKKQKKK
21 21 A C T 4 S- 0 0 58 569 0 cCCCCcCCCCCCCCCCCCCCCCCCCCCCCcCCCCCCcCCCCCCCCCCCCCcCCCCccCCCC.CCCCCCCC
22 22 A G < + 0 0 52 570 44 GGGGPGGGGGGGGGGGGGGGDKGKGGGGGGGPGHGGGKGGGGGHGGGGGGGGGGGNNGGGGgGKGGGKGG
23 23 A N - 0 0 21 570 59 GNNASGHRHRQNHAAANHHHHSHQNHNHNGHSNHQRGQHNHHNHNNNNNNGQQQQGGQNQQhHQQQHQRN
24 24 A D S S+ 0 0 113 570 66 ELDEKEIDNEKLDEEEGGGGGRNAENPNDENKDKKEERGTGDDGPPPPPDERRRREERDRRPGRRRDSED
25 25 A T E +A 15 0A 37 570 68 SEEEDSGESEKEREEEVEEEEKSKESESESSDEGKESMTVVEEQEEEEEESKKKKYYKIKKREKKKTREK
26 26 A A E -AB 14 46A 0 570 38 AMMAVALVAVVMAAAAAAAAATAVVAMAMAAVMAVVACAAAAMAMMMMMMAVVVVAAVMVVAACVVLVVM
27 27 A Y E -AB 13 45A 38 570 67 YDNWTYSRYRSDYWWWWWWWWSYARYDYNYYTNRSRYTWYWWNYDDDDDNYTTTTYYTSTTYAQTTLARS
28 28 A W E + B 0 44A 93 570 21 FYFYYFYYFYYYWYYYYYYYYYFYFFYFFFFYFYYYFYYYYYFYYYYYYFFYYYYFFYYYYFFYYYFYFY
29 29 A W E - B 0 43A 68 570 82 FYHTSFKTMYSYYTTTTTTTTYMSYMYMHFMSHVSYFRTTTTHAYYYYYHFTTTTYYTATTMYYTTRSTA
30 30 A E E - B 0 42A 134 570 79 QTTLQQEAQTQTMLLLIIIIIEQQTQTQTQQQTLQTQEIIIITSTTTTTTQEEEEQQETEEQTQEETQAT
31 31 A M E - B 0 41A 81 570 77 LLLKVLMVIQALQKKKKKKKKMIAQILILLIVLKAQLVKKKKLMLLLLLLLAAAALLALAALRMAAAAVL
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 ILLTLILLILTLITTTTTTTTTITLILILIILLTTLITTTTTLMLLLLLLITTTTIITLTTTMTTTLTLL
34 34 A R S S- 0 0 240 570 30 RRRARRRRRRRRRAAAGGGGGRRRRRRRRRRRRRRRRRGGGGRRRRRRRRRRRRRRRRRRRRRRRRRRRR
35 35 A A S S+ 0 0 89 570 36 SSSSSSSSSSSSSSSSSAAAASSSSSSSSSSSSSSSSAASAASSSSSSSSSSSSASSSSASCSSAASSSS
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PGGPGPGGPGPGSPPPPPPPPPPPGPGPGPPGGPPGPPPPPPGGGGGGGGPPPPPPPPGPPPGPPPGPGG
40 40 A S S S- 0 0 54 570 80 MQTPSMSSMSMQEPPPPPPPPMMLSMQMTMMSTEMSMSPPPPTQQQQQQTMMMMMMMMQMMMQMMMQLSQ
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 TVVRITIITVTVRRRRRRRRRVTTVTVTVTTIVKTVTIRRRRVIVVVVVVTLLLLTTLVLLTTTLLITIV
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 YYYFYYYYYYCYFFFFFFFFFAYCYYYYYYYYYYCYYCFFFFYFYYYYYYYCCCCLLCYCCYYVCCYCYF
45 45 A K E -BC 27 52A 31 570 69 KEDKNKKRKTEEIKKKKKKKKKKETKEKDKKNDTETKTKKKKDEEEEEEDKTTTTRRTTTTKTTTTTETT
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 VKPTLVLDAETKSTTTTKKKKHATPAKAPVALPETEVKKTTKPCKKKKKPVMMMLTTMTLTGTTLLPTDT
48 48 A K S S+ 0 0 156 570 63 NKKDKNNCnCVKEDDEENEEEVnVRnKnKNnKKEVCNKDDEEKSKKKKKKNNNNHTTHKAVnRNNNKMCK
49 49 A C S S- 0 0 58 562 0 CCCCCCC.c.CCCCCCCCCCCCcCCcCcCCcCCCC.CCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCC.C
50 50 A G + 0 0 34 570 47 GGGKGGGGGGGGEKKKGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAAGGGGGGGGGRGGQ
51 51 A H - 0 0 71 566 64 HHYNHH NYHNHYNNNHRHHHSYNHYHYYHYHYYNHHHNYYRYHHHHHHYHKKKKKKKYKKHHNKKYHYF
52 52 A T E +C 45 0A 40 566 72 RKKKRR KQKRKKKKKRRRRRRQRKQKQKRQRKRRKRERRRRKKKKKKKKRSSSSTTSKSSRQRSSKRKK
53 53 A W E -C 44 0A 49 556 4 WFFW W WWWWFWWWWWWWWWWWWWWFWFWW FWWWWFWWWWFYFFFFFFWWWWWWWW WWWFWWWFWW
54 54 A R E -C 43 0A 113 544 27 KSSR K NRNKSRRRRRRRRRKRKNRSRSKR SRKNK RRRRSRSSSSSSKRRRRRRR RRRQKRRSKT
55 55 A S - 0 0 14 502 37 E QE E TDT EEEEEGGGGQD TD DQED QE TE EEEGQT QEQQQQDDQ QQDE QQ Q
56 56 A Y 0 0 150 248 0 Y YYYYYYYY Y YYYY
57 57 A E 0 0 184 205 46 N NNNNNNNN NSNS
## ALIGNMENTS 491 - 560
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....0....:....1....:....2....:....3....:....4....:....5....:....6
1 1 A G 0 0 134 266 34 Q A D E DDD E QEDD EDDDED NEQDQEDEEEEEEE EEEEEEEEESE EDEADDDEEEE
2 2 A S + 0 0 123 346 72 DAD AQA EEASEKDDTSSSTDDDKDDDDDDDTADSSDSTTTTTTDDTTTTTTTTTDSSTDTADEETTTT
3 3 A H + 0 0 161 346 84 RMR MAM IHMASVVMEAAVEVVMVVVVEVMGEVVVDIDEEEEEEMMEEEEEEEEEAKAEVEAVSSEEEE
4 4 A M - 0 0 139 379 81 QVA VLM IDVEQLLSEEEEELLSMLLLSLSLEELEELEEEEEEESSEEEEEEEEESKEELELLQQEEEE
5 5 A E + 0 0 167 445 64 KAEEGDEGESAGEGGDGGGRGGGDSGGGDGDIGRGKNGNGGGGGGDDGGGGGGGGGSSGGGGGGEENNGG
6 6 A Q - 0 0 127 476 72 AQGSQKGEEEQGAEGVAGGHSGGVEGGGLGVDARGHADAAAAAAAVVSSSSSSAAAMVGSGADGAADDAS
7 7 A D + 0 0 104 512 59 DAEQPNPQQDQQADGDNQQKNGGGVGGGPGDEDNGNNENNNNNNNDDNNNNNNNNNDDQNGDNGAAQQNN
8 8 A L + 0 0 67 522 93 AEEKEIQLKDEIREWDFIIVFWWETWWWVWNDFIWLFVFFFFFFFNNFFFFFFFFFPTIFWFNWRRFFFF
9 9 A K S S+ 0 0 215 538 75 ARAERSTQVARTGYDAETTSEDDEGDDDNDADEQDQEFEEEEEEEAAEEEEEEEEEAQTEDEKDGGEEEE
10 10 A T S S+ 0 0 78 545 71 DSEESTEDQESTAKNEGTTTGNNAPNNNENENGTNTGEGGGGGGGDDGGGGGGGGGDTTGNGPNAAGGGG
11 11 A L S S- 0 0 75 566 72 GIGAIEVGLGIIKYVIKIIEKVVMAVVVVVILKDVEKNKKKKKKKIIKKKKKKKKKMFIKVKQVKKKKKK
12 12 A P - 0 0 87 570 62 PSPASATASPSPAaDgpPPApDDgrDDDPDgKpNDSpapppppppggpppppppppPSPpDpeDAApppp
13 13 A T E -A 27 0A 75 450 70 I.IT.T.KKT...tQta..VaQQttQQQ.Qt.aTQTaqaaaaaaattaaaaaaaaaD..aQatQ..dara
14 14 A T E -A 26 0A 43 484 60 VTVITI.VVVK..CTTT..TDTTTVTTT.TTFSVTANTNTNTTNTTTDDDDDDTNTGE.DTNIT..DDDD
15 15 A K E +A 25 0A 189 516 72 SSNESK.KNES.PEATD..TDKKEEKKK.KTVDNKHDEDDDDDDDTTDDDDDDDDDME.DKDKKPPDDDD
16 16 A I - 0 0 40 534 73 RLRELE.EKRL.AKVVV..EVVVTEVTVGVASVEVEVAVVVVVVVAAVVVVVVVVVLF.VVVEVAAVVVV
17 17 A T - 0 0 84 548 84 KQQKQT.EKEQ.SKQKT..TTQQRPQQQGQIKVTQTIKIVVVVVVIITTTTTTVVVSQ.TQHKQSSTTYT
18 18 A C > - 0 0 4 569 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PGPPGPPPEPGQPIPPEQQPEPPPPPPPPPPGDPPPDPDDDDDDDPPEEEEEEDDEGRQEPDPPPPEEDE
20 20 A K T 4 S+ 0 0 148 570 62 KKKKKKANKQKnKKnEDnnKEnnEKnnnnnKkDKnKEEEEEEEEEEEEEEEEEEEEKKnEnEGnKKEEEE
21 21 A C T 4 S- 0 0 58 569 0 CCCCCCCCCCCcCCcCCccCCccCCcccccCcCCcCCCCCCCCCCCCCCCCCCCCCCCcCcCCcCCCCCC
22 22 A G < + 0 0 52 570 44 GGGGGGKNGHGQSDGGGRQGGGGGGGGADGEGGGGGGGGDGGDGDGGGGGGGGDGGKGQGGGGGSSGGAG
23 23 A N - 0 0 21 570 59 NQNNQRHHHNQSHSGHHSSRHGGHNGGGSGHSHRGRAHAHHHHHHHHHHHHHHHHHSLSHGHNGHHHHNH
24 24 A D S S+ 0 0 113 570 66 DRDDREGDDDRTTNEDGTTTGEEDPEEENEDEGEEEEDEGGGGGGDDGGGGGGGGGRRTGETDETTGGTG
25 25 A T E +A 15 0A 37 570 68 KKQHKEKMEKKKEKRREKKEKSSRESSSKSVEKESEEREEEEEEEVVKKKKKKEEEKKKKSEESEEEESK
26 26 A A E -AB 14 46A 0 570 38 MVMMVVAAAMVAAAAAAAAVAAAAMAAAAAAVAVAVAAAAAAAAAAAAAAAAAAAATCAAAAMAAAAAAA
27 27 A Y E -AB 13 45A 38 570 67 STSTTRVYNSTYYLYRWYYRWYYSDYYYYYRSWRYKWNWWWWWWWRRWWWWWWWWWSSYWYWNYYYWWWW
28 28 A W E + B 0 44A 93 570 21 YYYFYFYCFYYFFFFYYFFFYFFFYFFFFFYFYYFYYFYYYYYYYYYYYYYYYYYYYFFYFYFFFFYYYY
29 29 A W E - B 0 43A 68 570 82 ATAHTSHIYATIYMFETIITTFFQYFFFYFEVTTFTTFTTTTTTTEETTTTTTTTTYFITFTHFYYTTTT
30 30 A E E - B 0 42A 134 570 79 TETTEAEMTTEQEEQMIQQTIQQMTQQQQQMEINQTLQLIIIIIIMMIIIIIIIIIEQQIQITQEEIIII
31 31 A M E - B 0 41A 81 570 77 LALLAVLFRLAIILLKKIIAKLLQLLLLLLKLKVLVKLKKKKKKKKKKKKKKKKKKMMIKLKLLIIKKKK
32 32 A Q + 0 0 121 570 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
33 33 A T - 0 0 100 570 54 LTLLTLTTMLTMITIITMMITIIILIIITIITTLILTTTTTTTTTIITTTTTTTTTTTMTITLIIITTTT
34 34 A R S S- 0 0 240 570 30 RRRRRRRRRRRRRRRRGRRRGRRRRRRRRRRRGRRRARAGGGGGGRRGGGGGGGGGRRRGRGRRRRGGAG
35 35 A A S S+ 0 0 89 570 36 SSSSSSSSSSASSSSSSSSSSSSSSSSSSSSSASSSSSSAAAAAASSSSSSSSAAASSSSSASSSSAASS
36 36 A G S S+ 0 0 78 570 11 AAAAAAASAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 GPGGPGPPGGPPPPPSPPPGPPPSGPPPPPSPPGPGPPPPPPPPPSSPPPPPPPPPPPPPPPGPPPPPPP
40 40 A S S S- 0 0 54 570 80 QMQSMSMMQQMAMMMEPAASPMMEQMMMPMEMPSMSPSPPPPPPPEEPPPPPPPPPMMAPMPTMMMPPPP
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 VLVVLIIRTVLVAITRRVVVRTTRVTTTSTRIRLTVRTRRRRRRRRRRRRRRRRRRVTVRTRVTAARRRR
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFIFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 FCFYCFYFYFCFYYYFFFFFFYYFYYYYFYFYFYYYFYFFFFFFFFFFFFFFFFFFAVFFYFYFYYFFFF
45 45 A K E -BC 27 52A 31 570 69 TTTETNMMTTTKCEKTKKKHKKKTEKKKKKTKKMKSKRKKKKKKKTTKKKKKKKKKKTKKKKDKCCKKKK
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 TMTPVDACTTLVCVVVKVVDQVVTKVVVVVVIQDVETMTKKKKKKVVQQQKQQKKKHHVQVKPVCCKKTQ
48 48 A K S S+ 0 0 156 570 63 KNKRNCnDRKHENLSENEECENNEKNNNENERECNCEKEEEEEEEEEEEEADEEEEVHEENEKNNNEDQE
49 49 A C S S- 0 0 58 562 0 CCCCC.cCCCCCCCCCCCC.CCCCCCCCCCCCC.C.CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
50 50 A G + 0 0 34 570 47 QGKAGGKKGKGGRKGSGGGGGAAGGGGGGGDKGGGGGAGGGGGGGDDGGGGGGGGGGGGGAGGGRRGGGG
51 51 A H - 0 0 71 566 64 FKYYKFHNHFKHFTNHRHHHHHHYHKNHKNHKKYNNNSNHHRHHHHHHHHHHHHHRSNHHHYYNFFYYHH
52 52 A T E +C 45 0A 40 566 72 KSKKSRRRQKSQRNRKRQQRRRRKKRRRQRKVRTRSRKRRRRRRRKKRRRRRRRRRRRQRRRKRRRRRRR
53 53 A W E -C 44 0A 49 556 4 W FWWWWS WWWWWWWWWWWWWWFWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFWWWWWWW
54 54 A R E -C 43 0A 113 544 27 R SRSNKQ RRRKRRRRRSRKKRSKKKRKRRRQKNRKRRRRRRRRRRRRRRRRRRKKRRKRSRRRRRRR
55 55 A S - 0 0 14 502 37 Q TQHENE QQEEEEGQQEEEEE EEEEEEEGEEEE EGGGGGGEEEEEDEEGGGQQQEEEQEEEDDEE
56 56 A Y 0 0 150 248 0 Y Y Y Y Y YYYYYYY YYYYYYYYY Y Y YYYY
57 57 A E 0 0 184 205 46 N N N N NNNNNNN NNNNNNNNN N N NNNN
## ALIGNMENTS 561 - 569
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....7....:....8....:....9....:....0....:....1....:....2....:....3
1 1 A G 0 0 134 266 34 EDDDEEEEE
2 2 A S + 0 0 123 346 72 EDDGDEEDE
3 3 A H + 0 0 161 346 84 QVVIMFFMF
4 4 A M - 0 0 139 379 81 SLLIDAADA
5 5 A E + 0 0 167 445 64 DGGTNNNNN
6 6 A Q - 0 0 127 476 72 LGGEAAAAA
7 7 A D + 0 0 104 512 59 PGGESDDSD
8 8 A L + 0 0 67 522 93 VWWSTSSTS
9 9 A K S S+ 0 0 215 538 75 NDDEAVVAV
10 10 A T S S+ 0 0 78 545 71 ENNAEGGEG
11 11 A L S S- 0 0 75 566 72 VVVQVTTVT
12 12 A P - 0 0 87 570 62 PDDnPQQPQ
13 13 A T E -A 27 0A 75 450 70 .QQk.....
14 14 A T E -A 26 0A 43 484 60 .TTT.....
15 15 A K E +A 25 0A 189 516 72 .KKK.....
16 16 A I - 0 0 40 534 73 GVVG.....
17 17 A T - 0 0 84 548 84 GQQR.....
18 18 A C > - 0 0 4 569 0 CCCCCCCCC
19 19 A P T 4 S+ 0 0 111 569 46 PPPDPPPPP
20 20 A K T 4 S+ 0 0 148 570 62 nnnRAaaAa
21 21 A C T 4 S- 0 0 58 569 0 cccCCccCc
22 22 A G < + 0 0 52 570 44 DGGeGHHGN
23 23 A N - 0 0 21 570 59 SGGdYGGYG
24 24 A D S S+ 0 0 113 570 66 KEETREERE
25 25 A T E +A 15 0A 37 570 68 KSSWERRER
26 26 A A E -AB 14 46A 0 570 38 AAALAAAAA
27 27 A Y E -AB 13 45A 38 570 67 YYYYAYYAY
28 28 A W E + B 0 44A 93 570 21 FFFYYFFYF
29 29 A W E - B 0 43A 68 570 82 YFFYYFFYF
30 30 A E E - B 0 42A 134 570 79 QQQTQQQQQ
31 31 A M E - B 0 41A 81 570 77 LLLRVLLVL
32 32 A Q + 0 0 121 570 0 QQQQQQQQQ
33 33 A T - 0 0 100 570 54 TIILIIIII
34 34 A R S S- 0 0 240 570 30 RRRRRRRRR
35 35 A A S S+ 0 0 89 570 36 SSSSSSSSS
36 36 A G S S+ 0 0 78 570 11 AAAAAAAAA
37 37 A D S S- 0 0 101 570 0 DDDDDDDDD
38 38 A E - 0 0 66 570 0 EEEEEEEEE
39 39 A P S S+ 0 0 85 570 41 PPPGPPPPP
40 40 A S S S- 0 0 54 570 80 PMMQMMMMM
41 41 A T E -B 31 0A 7 570 8 TTTTTTTTT
42 42 A I E -B 30 0A 26 570 75 STTITTTTT
43 43 A F E -BC 29 54A 50 570 7 FFFFFFFFF
44 44 A Y E -BC 28 53A 39 570 19 FFFYYLLYL
45 45 A K E -BC 27 52A 31 570 69 KKKEKKKKK
46 46 A C E -B 26 0A 1 570 0 CCCCCCCCC
47 47 A T S S+ 0 0 45 570 74 IVVTKTTKT
48 48 A K S S+ 0 0 156 570 63 ENNKnSSnS
49 49 A C S S- 0 0 58 562 0 CCCCcCCcC
50 50 A G + 0 0 34 570 47 GGGGGGGGG
51 51 A H - 0 0 71 566 64 KNNHNAANA
52 52 A T E +C 45 0A 40 566 72 QRRKNRRNR
53 53 A W E -C 44 0A 49 556 4 WWWWWWWWW
54 54 A R E -C 43 0A 113 544 27 RRRSRRRRR
55 55 A S - 0 0 14 502 37 EEEQEEEEE
56 56 A Y 0 0 150 248 0 Y
57 57 A E 0 0 184 205 46
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 2 3 0 2 0 0 0 0 0 12 57 1 23 266 0 0 1.216 40 0.66
2 2 A 3 0 4 0 0 0 0 2 10 1 14 16 0 0 0 4 5 12 1 27 346 0 0 2.129 71 0.28
3 3 A 18 1 11 8 1 0 0 1 8 1 8 5 0 1 1 6 1 19 1 8 346 0 0 2.385 79 0.16
4 4 A 19 14 6 11 1 0 0 0 5 1 9 3 0 0 0 1 2 26 0 1 379 0 0 2.137 71 0.19
5 5 A 0 0 2 0 0 0 0 20 8 6 12 2 0 1 1 1 0 21 6 18 445 0 0 2.134 71 0.35
6 6 A 8 0 1 2 0 0 0 9 23 0 11 1 0 0 1 4 11 20 1 8 476 0 0 2.207 73 0.27
7 7 A 2 0 0 0 0 0 0 15 5 2 2 2 0 0 1 5 5 17 21 24 512 0 0 2.062 68 0.40
8 8 A 10 9 5 2 14 5 1 1 8 3 4 6 0 0 2 2 2 12 6 7 522 0 0 2.672 89 0.06
9 9 A 2 0 1 1 0 1 0 5 8 2 6 7 0 0 5 16 7 22 6 9 538 0 0 2.429 81 0.24
10 10 A 1 0 1 0 0 0 0 23 5 5 10 22 0 0 1 5 4 4 10 8 545 0 0 2.250 75 0.28
11 11 A 8 38 10 8 1 0 1 2 4 0 1 3 0 0 1 15 1 2 2 1 566 0 0 2.090 69 0.27
12 12 A 2 1 1 0 0 0 2 4 8 55 7 2 0 0 3 5 2 2 1 6 570 120 175 1.754 58 0.38
13 13 A 3 0 3 0 0 0 0 0 14 0 2 42 0 1 0 13 8 7 0 6 450 0 0 1.855 61 0.29
14 14 A 9 0 9 0 0 0 0 4 4 0 3 56 1 0 2 4 0 4 2 4 484 0 0 1.683 56 0.40
15 15 A 1 0 0 3 0 1 0 8 3 1 7 10 0 0 6 19 3 13 3 23 516 0 0 2.253 75 0.27
16 16 A 32 5 14 0 1 0 0 1 24 0 0 5 0 0 2 3 1 11 0 0 534 0 0 1.940 64 0.27
17 17 A 12 4 9 0 0 0 1 2 1 2 3 16 0 5 6 14 14 8 1 2 548 0 0 2.454 81 0.16
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 569 0 0 0.026 0 0.99
19 19 A 1 0 0 0 0 0 0 6 0 69 1 0 0 0 2 1 1 9 0 10 569 0 0 1.163 38 0.54
20 20 A 1 0 0 0 1 0 0 1 5 0 6 0 0 0 5 37 2 29 10 3 570 1 48 1.752 58 0.37
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 569 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 69 1 0 2 2 0 3 1 11 1 3 2 7 570 0 3 1.236 41 0.56
23 23 A 0 0 0 0 1 0 2 7 2 0 5 2 0 32 1 0 6 1 42 0 570 0 0 1.624 54 0.41
24 24 A 0 1 0 4 0 0 0 10 1 2 1 7 0 2 9 3 4 13 8 35 570 0 0 2.137 71 0.34
25 25 A 2 2 0 2 0 0 0 3 0 0 6 6 0 0 16 15 2 44 0 1 570 0 0 1.795 59 0.31
26 26 A 9 1 0 6 0 0 1 0 78 0 0 2 2 0 0 0 0 0 0 0 570 0 0 0.901 30 0.61
27 27 A 3 2 0 0 9 14 45 0 2 0 7 5 0 4 3 1 1 1 2 2 570 0 0 1.955 65 0.33
28 28 A 2 0 0 0 29 29 37 0 1 0 2 0 0 0 1 0 0 0 0 0 570 0 0 1.316 43 0.79
29 29 A 3 2 1 3 7 26 21 0 2 0 2 16 0 3 3 5 1 5 0 0 570 0 0 2.186 72 0.17
30 30 A 2 18 13 20 0 0 0 0 1 0 4 10 0 0 0 0 16 17 0 0 570 0 0 1.979 66 0.21
31 31 A 6 27 5 9 1 0 0 0 4 0 0 0 0 0 7 20 19 0 0 0 570 0 0 1.934 64 0.22
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 570 0 0 0.000 0 1.00
33 33 A 0 15 29 2 0 0 0 0 0 0 0 54 0 0 0 0 0 0 0 0 570 0 0 1.070 35 0.45
34 34 A 0 0 0 0 0 0 0 8 6 0 0 0 0 0 86 0 0 0 0 0 570 0 0 0.500 16 0.70
35 35 A 0 0 0 0 0 0 0 1 24 0 68 0 3 0 4 0 0 0 0 0 570 0 0 0.893 29 0.63
36 36 A 0 2 0 0 0 0 0 4 92 0 2 0 0 0 0 0 0 0 0 0 570 0 0 0.360 12 0.89
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 570 0 0 0.000 0 1.00
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 570 0 0 0.013 0 1.00
39 39 A 0 0 0 0 0 0 0 12 3 63 21 0 0 0 0 0 0 0 0 0 570 0 0 0.982 32 0.58
40 40 A 0 1 1 19 0 0 0 0 4 21 14 4 0 0 0 0 5 31 0 0 570 0 0 1.758 58 0.20
41 41 A 4 0 0 0 0 0 0 0 0 0 2 95 0 0 0 0 0 0 0 0 570 0 0 0.247 8 0.91
42 42 A 11 5 14 0 0 0 0 0 1 0 0 14 0 0 52 1 2 0 0 0 570 0 0 1.496 49 0.25
43 43 A 0 1 2 0 96 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 570 0 0 0.245 8 0.93
44 44 A 0 2 0 0 41 0 49 0 2 0 0 0 5 0 0 0 0 0 0 0 570 0 0 1.055 35 0.80
45 45 A 4 0 9 1 0 0 0 0 0 0 1 17 1 0 15 43 0 6 1 1 570 0 0 1.738 58 0.31
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 570 0 0 0.000 0 1.00
47 47 A 13 4 2 2 0 0 0 0 3 3 4 43 4 2 1 14 2 2 0 1 570 0 0 1.986 66 0.26
48 48 A 1 1 0 0 0 0 0 0 2 0 4 1 1 1 5 38 1 28 14 3 570 8 30 1.746 58 0.36
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 562 0 0 0.026 0 0.99
50 50 A 0 0 0 0 0 0 0 62 2 0 4 0 0 1 3 7 2 14 5 2 570 0 0 1.373 45 0.53
51 51 A 0 1 0 0 4 0 18 0 2 0 2 0 0 51 1 13 1 0 7 0 566 0 0 1.515 50 0.36
52 52 A 8 0 1 0 0 0 0 2 0 0 3 23 0 2 30 23 5 2 1 0 566 0 0 1.809 60 0.28
53 53 A 0 0 0 0 7 90 3 0 0 0 0 0 0 0 0 0 0 0 0 0 556 0 0 0.399 13 0.96
54 54 A 0 0 0 0 0 0 0 0 0 0 5 1 0 0 78 13 1 0 2 0 544 0 0 0.761 25 0.73
55 55 A 0 0 0 0 0 0 0 9 1 0 3 3 0 0 0 0 10 66 2 5 502 0 0 1.253 41 0.62
56 56 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 248 0 0 0.000 0 1.00
57 57 A 0 0 0 0 0 0 0 0 1 0 3 0 0 0 0 0 1 28 34 31 205 0 0 1.341 44 0.54
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
23 3 69 1 pVs
26 5 68 1 pKt
27 3 65 1 pKv
31 3 65 1 pKv
35 3 69 1 pVt
40 2 69 1 pVt
50 8 64 1 pRv
71 9 59 1 pIt
81 8 65 1 pKv
82 10 79 1 pKv
83 10 65 1 pKa
87 10 59 1 pVd
91 9 50 1 pYd
92 9 59 1 pIt
97 8 59 1 pYd
98 8 60 1 pYd
102 10 65 1 pKv
105 46 85 1 aSa
113 4 61 1 eSt
121 3 49 1 pTt
122 10 65 1 pTt
124 3 50 1 pTt
126 3 61 1 pTt
137 33 70 2 nAQc
141 8 74 2 iDSc
142 10 49 1 pId
144 8 57 1 pLd
176 9 75 2 vESc
181 42 97 2 nSKc
186 41 817 2 nAQc
188 41 792 2 nAQc
189 43 102 2 nNDc
199 3 64 1 aPk
199 39 101 2 nGNc
205 8 49 1 pLd
207 44 102 2 nEKc
208 8 65 1 qNk
215 13 302 1 vQh
217 13 302 1 vQh
218 12 61 1 gPt
219 7 86 1 rSt
220 13 302 1 vQh
228 12 61 1 gPt
234 13 302 1 vQh
235 13 302 1 vQh
242 43 157 2 kEEc
243 9 35 1 eFe
245 40 64 2 nVQc
246 19 63 1 gEe
247 13 69 1 aAk
249 13 62 1 pKa
250 13 62 1 pKa
251 13 62 1 pKa
258 13 62 1 pTa
260 13 91 1 kAt
261 9 57 1 pLd
262 13 61 1 sKa
266 7 57 1 pLd
268 7 48 1 pLd
272 9 60 1 gPt
273 12 53 1 gPt
274 12 295 1 kAk
278 3 64 1 aPk
278 39 101 2 rEEc
288 12 53 1 gPt
289 9 61 1 gPt
290 9 60 1 gPt
291 12 53 1 gPt
292 12 53 1 gPt
293 12 53 1 gPt
294 12 53 1 gPt
295 12 62 1 gPt
296 12 53 1 gPt
299 12 62 1 gPt
300 44 101 2 nSSc
301 12 62 1 gPt
306 48 101 2 kEEc
307 10 80 2 aEGc
308 10 80 2 aEGc
309 10 80 2 aEGc
310 13 65 1 aAs
310 49 102 2 nNEc
311 13 64 1 pKa
312 13 64 1 pKa
313 13 64 1 pKa
314 13 64 1 pKa
316 13 62 1 pTa
317 13 62 1 aAe
319 10 80 2 aEGc
323 13 64 1 pTa
325 13 65 1 aAs
325 49 102 2 nNEc
326 13 64 1 pKa
327 13 62 1 pKa
333 13 62 1 pKa
334 13 62 1 pKa
335 13 62 1 pKa
337 13 64 1 pKa
339 13 64 1 pKa
340 13 64 1 pKa
341 13 64 1 pKa
342 13 62 1 pKa
343 13 62 1 pKa
345 13 62 1 pKa
346 13 62 1 pKa
347 13 62 1 pKa
348 13 64 1 pKa
349 13 64 1 pKa
350 7 50 1 gPt
351 12 62 1 gPt
362 13 64 1 pIa
364 13 45 1 gNf
365 13 51 1 gNf
367 13 67 3 kKCEc
370 12 62 1 pTa
371 49 89 2 nKEc
372 9 125 1 pAi
373 9 125 1 pAi
374 9 125 1 pAv
375 46 73 2 nEDc
376 9 125 1 pAi
377 9 125 1 pAv
378 9 125 1 pAi
382 9 125 1 pAv
383 44 111 2 nPEc
388 7 56 1 pLd
390 13 58 1 aAe
394 13 61 1 aSt
397 21 72 3 nYDTc
401 13 61 1 aQk
401 49 98 2 nFDc
402 21 72 3 nYDTc
403 13 61 1 aQk
403 49 98 2 nFDc
404 13 430 2 aDGc
404 41 460 1 kSq
405 21 72 3 nYDTc
406 21 72 3 nYDTc
407 13 80 1 rAt
410 13 84 1 eAt
411 21 62 3 nYDTc
412 21 62 3 nYDTc
413 21 62 3 nYDTc
414 21 62 3 nYDTc
415 21 62 3 nYDTc
416 21 62 3 nYDTc
419 13 61 1 pTa
420 21 72 3 nYDTc
421 21 62 3 nYDTc
422 13 80 1 rAt
423 13 84 1 eAt
424 13 67 1 pKa
426 21 72 3 nYDTc
429 13 61 1 aQk
429 49 98 2 nFDc
432 13 78 1 rAt
434 13 64 1 pKa
435 13 64 1 pKa
436 13 64 1 pKa
437 13 62 1 pKd
438 13 62 1 pTa
439 13 64 1 pTa
440 13 64 1 pTa
441 13 64 1 pTa
443 13 61 1 aQk
443 49 98 2 nFDc
446 13 61 1 aQk
446 49 98 2 nFDc
447 13 80 1 rAt
448 13 61 1 aQk
448 49 98 2 nFDc
449 13 84 1 eAt
450 21 72 3 nYDTc
451 13 61 1 aQk
451 49 98 2 nFDc
453 13 102 1 eAt
454 8 62 1 pLd
457 21 72 3 nYDTc
459 13 62 1 pTa
460 13 51 1 pTd
461 13 63 1 pTs
462 13 64 1 pTa
463 13 84 1 eAt
465 13 80 1 rAt
466 13 80 1 rAt
467 13 80 1 rAt
468 13 80 1 rAt
469 13 80 1 rAt
470 13 204 1 eAt
471 21 72 3 nYDTc
476 18 80 2 sDTc
477 18 80 2 sDTc
482 14 73 1 gEh
482 40 100 2 nAQc
497 44 102 2 nKNc
502 15 112 4 nEDNPc
504 13 61 1 aSt
505 21 89 3 nYDEc
506 12 61 1 gPt
507 13 62 1 pTa
508 15 112 4 nEDNPc
509 15 112 4 nEDNPc
511 13 62 1 pTa
512 21 72 3 nYEKc
513 21 72 3 nYEKc
514 12 59 1 gPt
515 13 80 1 rAt
516 21 72 3 nYDKc
517 21 72 3 nYDTc
518 21 72 3 nYDKc
519 18 80 2 nEKc
520 21 73 3 nYDNc
521 12 60 1 gPt
522 20 67 3 kRCEc
523 13 55 1 pTa
525 21 72 3 nYDKc
527 13 64 1 pKa
528 13 63 1 aQq
529 13 64 1 pKa
530 13 64 1 pTa
531 13 64 1 pTa
532 13 64 1 pTa
533 13 64 1 pTa
534 13 64 1 pTa
535 13 64 1 pTa
536 12 60 1 gPt
537 12 60 1 gPt
538 13 62 1 pTa
539 13 62 1 pTa
540 13 62 1 pTa
541 13 62 1 pTa
542 13 62 1 pTa
543 13 62 1 pTa
544 13 64 1 pTa
545 13 64 1 pTa
546 13 64 1 pTa
549 15 112 4 nEDNPc
550 13 62 1 pTa
551 21 62 3 nYDTc
552 13 62 1 pTa
553 13 83 1 eAt
554 21 72 3 nYEKc
557 13 64 1 pTd
558 13 64 1 pTa
559 13 62 1 pTr
560 13 62 1 pTa
561 18 80 2 nETc
562 21 72 3 nYEKc
563 21 72 3 nYEKc
564 13 63 1 nAk
564 23 74 1 eEd
565 44 102 2 nKLc
566 16 79 2 aESc
567 16 79 2 aESc
568 44 102 2 nKMc
569 16 79 2 aESc
//