Complet list of 1qxn hssp file
Complete list of 1qxn.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1QXN
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-07
HEADER TRANSFERASE 08-SEP-03 1QXN
COMPND MOL_ID: 1; MOLECULE: SULFIDE DEHYDROGENASE; CHAIN: A, B; SYNONYM: SUD;
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: WOLINELLA SUCCINOGENES; ORGANISM_TAXID
AUTHOR Y.J.LIN,F.DANCEA,F.LOEHR,O.KLIMMEK,S.PFEIFFER-MAREK, M.NILGES,H.WIENK,
DBREF 1QXN A 1 129 UNP Q56748 Q56748_WOLSU 21 149
DBREF 1QXN B 1 129 UNP Q56748 Q56748_WOLSU 21 149
SEQLENGTH 137
NCHAIN 2 chain(s) in 1QXN data set
KCHAIN 1 chain(s) used here ; chains(s) : A
NALIGN 29
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q56748_WOLSC 1.00 1.00 1 129 21 149 129 0 0 149 Q56748 Sulfide dehydrogenase (Precursor) OS=Wolinella succinogenes GN=sud PE=1 SV=1
2 : Q79HP4_WOLSU 1.00 1.00 1 129 21 149 129 0 0 149 Q79HP4 SULFIDE DEHYDROGENASE OS=Wolinella succinogenes (strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W) GN=SUD PE=4 SV=1
3 : D0RNB5_9PROT 0.38 0.62 25 125 20 124 107 2 8 130 D0RNB5 Rhodanese-like sulfurtransferase OS=alpha proteobacterium HIMB114 GN=HIMB114_00002810 PE=4 SV=1
4 : B9L8F2_NAUPA 0.34 0.60 3 130 21 148 129 2 2 156 B9L8F2 Sulfide dehydrogenase OS=Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH) GN=NAMH_0492 PE=4 SV=1
5 : D4H0U8_DENA2 0.34 0.65 11 126 30 144 116 1 1 164 D4H0U8 Rhodanese domain protein (Precursor) OS=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) GN=Dacet_1847 PE=4 SV=1
6 : F2KPE5_ARCVS 0.33 0.56 12 128 28 144 120 3 6 145 F2KPE5 Rhodanese-like protein (Precursor) OS=Archaeoglobus veneficus (strain DSM 11195 / SNP6) GN=Arcve_0343 PE=4 SV=1
7 : V4IG44_9DELT 0.33 0.56 8 126 30 145 121 3 7 162 V4IG44 Uncharacterized protein OS=uncultured Desulfofustis sp. PB-SRB1 GN=N839_01205 PE=4 SV=1
8 : A3YW88_9SYNE 0.32 0.57 15 130 15 131 118 2 3 135 A3YW88 Uncharacterized protein OS=Synechococcus sp. WH 5701 GN=WH5701_02314 PE=4 SV=1
9 : B3Q918_RHOPT 0.32 0.53 9 124 2 118 122 4 11 129 B3Q918 Rhodanese domain protein OS=Rhodopseudomonas palustris (strain TIE-1) GN=Rpal_4950 PE=4 SV=1
10 : E6W6I2_DESIS 0.32 0.55 13 127 48 160 115 2 2 161 E6W6I2 Rhodanese domain protein (Precursor) OS=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) GN=Selin_2606 PE=4 SV=1
11 : N9CNQ1_9GAMM 0.32 0.60 15 128 8 131 124 3 10 135 N9CNQ1 Uncharacterized protein OS=Acinetobacter towneri DSM 14962 = CIP 107472 GN=F947_01173 PE=4 SV=1
12 : Q1ASS9_RUBXD 0.32 0.55 7 124 1 115 119 3 5 119 Q1ASS9 Rhodanese-like protein OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_2632 PE=4 SV=1
13 : D3RYB1_FERPA 0.31 0.57 15 128 18 131 117 3 6 132 D3RYB1 Rhodanese domain protein (Precursor) OS=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) GN=Ferp_1321 PE=4 SV=1
14 : G2IU82_9SPHN 0.31 0.49 7 124 2 122 124 3 9 128 G2IU82 Uncharacterized protein OS=Sphingobium sp. SYK-6 GN=SLG_p_00190 PE=4 SV=1
15 : I3IPY8_9PLAN 0.31 0.57 3 126 24 142 124 2 5 146 I3IPY8 Uncharacterized protein OS=planctomycete KSU-1 GN=KSU1_D0474 PE=4 SV=1
16 : N6X6I6_9RHOO 0.31 0.53 9 131 2 121 125 4 7 126 N6X6I6 Sulfurtransferase OS=Thauera sp. 63 GN=C664_12160 PE=4 SV=1
17 : N8XT30_9GAMM 0.31 0.51 15 128 8 123 120 3 10 123 N8XT30 Uncharacterized protein OS=Acinetobacter sp. CIP 56.2 GN=F966_00332 PE=4 SV=1
18 : Q3J9M7_NITOC 0.31 0.57 3 120 238 353 120 4 6 361 Q3J9M7 Sulfurtransferase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=Noc_2007 PE=4 SV=1
19 : W0SG19_9RHOO 0.31 0.52 12 127 6 117 118 3 8 126 W0SG19 Sulfurtransferase OS=Sulfuritalea hydrogenivorans sk43H GN=SUTH_00856 PE=4 SV=1
20 : W0TP18_9GAMM 0.31 0.50 11 129 4 127 124 2 5 160 W0TP18 Rhodanese domain protein OS=gamma proteobacterium Hiromi1 GN=TBH_C2433 PE=4 SV=1
21 : A4ACS5_9GAMM 0.30 0.54 9 131 2 121 125 4 7 126 A4ACS5 Rhodanese-related protein sulfurtransferase OS=Congregibacter litoralis KT71 GN=KT71_19523 PE=4 SV=1
22 : B6BY96_9GAMM 0.30 0.55 3 123 242 360 123 4 6 365 B6BY96 Sulfurtransferase OS=Nitrosococcus oceani AFC27 GN=NOC27_868 PE=4 SV=1
23 : D3SBI7_THISK 0.30 0.52 15 126 10 126 117 3 5 137 D3SBI7 Rhodanese domain protein OS=Thioalkalivibrio sp. (strain K90mix) GN=TK90_1901 PE=4 SV=1
24 : D8K6Z1_NITWC 0.30 0.55 3 124 239 358 124 4 6 362 D8K6Z1 Sulfurtransferase OS=Nitrosococcus watsoni (strain C-113) GN=Nwat_1812 PE=4 SV=1
25 : H1DIG6_9PORP 0.30 0.45 4 120 16 127 119 4 9 130 H1DIG6 Uncharacterized protein OS=Odoribacter laneus YIT 12061 GN=HMPREF9449_02195 PE=4 SV=1
26 : L0A070_DEIPD 0.30 0.50 15 129 10 127 121 3 9 136 L0A070 Rhodanese-related sulfurtransferase OS=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) GN=Deipe_1299 PE=4 SV=1
27 : M5A3A0_9ACTN 0.30 0.55 9 124 2 112 116 2 5 386 M5A3A0 Putative molybdopterin synthase sulfurylase MoeB OS=Ilumatobacter coccineus YM16-304 GN=moeB PE=4 SV=1
28 : S3QIL7_9GAMM 0.30 0.56 10 126 3 129 127 3 10 131 S3QIL7 Uncharacterized protein OS=Acinetobacter gyllenbergii CIP 110306 GN=F957_00951 PE=4 SV=1
29 : W6RGQ5_PSEPS 0.30 0.54 13 131 6 121 121 4 7 126 W6RGQ5 Rhodanese domain-containing protein OS=Pseudomonas pseudoalcaligenes CECT 5344 GN=BN5_2520 PE=4 SV=1
## ALIGNMENTS 1 - 29
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A A 0 0 98 3 0 AA
2 2 A D > + 0 0 126 3 0 DD
3 3 A M T 3> + 0 0 65 8 4 MM L M M M M
4 4 A G H 3> S+ 0 0 5 9 16 GG S G G G GG
5 5 A E H <> S+ 0 0 158 9 64 EE G I E E EK
6 6 A K H > S+ 0 0 141 9 71 KK P L K K KS
7 7 A F H X S+ 0 0 9 11 83 FF M M LI R R RY
8 8 A D H X S+ 0 0 45 12 89 DD A D A TF V V VA
9 9 A A H X S+ 0 0 64 16 77 AA H T T K RKK S KS SS A
10 10 A T H X S+ 0 0 61 17 48 TT I K T S TKT T TT TR TT
11 11 A F H X S+ 0 0 0 19 84 FF FL T L Y SLA P FAP PM FA
12 12 A K H X S+ 0 0 68 21 64 KK KDKK K E KHQ QHLQQ QD RD
13 13 A A H X S+ 0 0 63 23 62 AA AAEE QA D QAD DDEDD DW DQD
14 14 A Q H X S+ 0 0 84 23 61 QQ EKQL ML L LDL LLLLL LV LLL
15 15 A V H >X S+ 0 0 9 29 31 VV VIVVVMLIVLVKVVVVIVVVVTVLIV
16 16 A K H >X S+ 0 0 116 29 79 KK KEADEETTAQSEAKQVKAQAQSQSLL
17 17 A A H 3X S+ 0 0 55 29 52 AA AAGAQAEEEAEDAQEEDAEEEPEADA
18 18 A A H << S+ 0 0 15 29 36 AA NTEAAAAAAEATAAAACAAAADAAAA
19 19 A K H << S+ 0 0 47 29 53 KK AADRRNRKRKNKKKRKMKRRRSKKKK
20 20 A A H < S+ 0 0 76 29 78 AA KKLAAAKSRGATASKSHAKQKVQSQT
21 21 A D S < S+ 0 0 51 29 86 DD YITERAVQQIVEREQQTGQHQSRSHR
22 22 A M S S- 0 0 17 29 48 MM VIVTIVTITYVVTIVIVIVVVFVIII
23 23 A V E -a 111 0A 76 29 78 VV KEKNEPPTRKEKHERKKTRERQETQT
24 24 A M E +a 112 0A 52 29 67 MM YQNQAREEQDSNENEEEEEEENNEEE
25 25 A L E -a 113 0A 36 30 28 LLLIIIVVVIMVILIILIVLVIIILLIIV
26 26 A S > - 0 0 41 29 57 SSSTKSPTSSSSSSTG.DSMADSDSSDSD
27 27 A P H > S+ 0 0 2 30 63 PPPPPPIPVVVPVPPISVTPLVPVVVTVL
28 28 A K H > S+ 0 0 87 30 78 KKLQSVAQDEQEDEKDPAAWEAEASDDKS
29 29 A D H > S+ 0 0 79 30 50 DDEQEEDQDEDEEDQADTEDGTATDQTDQ
30 30 A A H X S+ 0 0 0 30 64 AALLLALAALVVAAAAQVALAVLVFVAFA
31 31 A Y H X S+ 0 0 53 30 93 YYKKIFKFRNYRYAKEVKQEEKSKQASHE
32 32 A K H X S+ 0 0 125 29 62 KKEKKEREHKEEE.EAEQAEEQEQKAAKA
33 33 A L H X S+ 0 0 27 30 82 LLLWMLVELMVALRLAQRLRARKRLEKIA
34 34 A L H < S+ 0 0 0 30 48 LLQMIIILIIYLILIIELMLVLMLLLIWI
35 35 A Q H < S+ 0 0 74 30 78 QQKDKQDSEESRQVDRLGTQLGEGADDTR
36 36 A E H < S+ 0 0 132 30 67 EEQEEKETQAKSKGHDADKAADADDSETD
37 37 A N >< - 0 0 57 30 65 NNKDKnDGGGHGnAEASGRNAGGGTGGNA
38 38 A P T 3 S+ 0 0 93 19 65 PPPKQpEK.EPEpPK.G..P..E....N.
39 39 A D T 3 S+ 0 0 78 24 46 DDDDDDDA.NDGNDD.QK.D.KDKTE.D.
40 40 A I S < S- 0 0 13 29 77 IILFFFVVAIIIFVIDAT.IDTWTVAALD
41 41 A T E -b 85 0A 15 30 70 TTVTVVIALTITVQFVIATLVALAQVLIL
42 42 A L E -bc 86 62A 0 30 28 LLLVLIILVVLVIFIVLIILLILILLVLL
43 43 A I E -bc 87 63A 2 29 19 IIILILI.IIIVLVLIIIIVIIVIIILII
44 44 A D E -bc 88 64A 0 30 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDD
45 45 A V + 0 0 4 30 6 VVIVVVVIVVVVIIVVVVVVVVVVVVVVV
46 46 A R - 0 0 25 30 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR
47 47 A D > - 0 0 16 30 35 DDDEETTEDDEETETEDEEEEEEETEEEE
48 48 A P H > S+ 0 0 79 30 43 PPIPEPPPAPPPPPEPAPYPGPPPPPPPA
49 49 A D H > S+ 0 0 18 30 63 DDRANEDSPNEEEAEDEEDYNEYEAGDED
50 50 A E H >>S+ 0 0 30 30 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEE
51 51 A L H <5S+ 0 0 23 30 59 LLLTVFYWVWHWFVYFRFYYYFYFFQYYY
52 52 A K H <5S+ 0 0 139 30 75 KKKALSEEGEQGKADSVAAEQAEAEVEQS
53 53 A A H <5S+ 0 0 59 30 64 AAKAAQVENVAQSKKAAAAADAKAAQEEA
54 54 A M T <5S- 0 0 95 30 69 MMTGGGAHTGCGETVGGGGMGGIGGSGAA
55 55 A G < - 0 0 1 30 76 GGGTKHHIGVAHHGHHIHHHHHHHHGASH
56 56 A K E -E 128 0B 58 30 55 KKKVIIVDKIIIILLIILLIILVLIVIII
57 57 A P E -E 127 0B 0 29 66 PP.DEEPGIDDPDVKPPPPRGPPPPIPDP
58 58 A D + 0 0 79 29 75 DD.WSNDAAFRGGASGSGGDGGNGHPGRG
59 59 A V - 0 0 12 30 53 VVIISAAVGAAAASAAAAASAASAAGASA
60 60 A K S S+ 0 0 145 30 82 KKKENIYQAGVKIANVLIILIILILAVVI
61 61 A N S S+ 0 0 16 30 70 NNGLYNNVVTNHNVLNNNNLNNLNNVHNN
62 62 A Y E -c 42 0A 51 30 72 YYAEMVIPNKFIIHIIIVIVIVIVISIFI
63 63 A K E -c 43 0A 42 30 68 KKKKHNPRITPPDVPPSPPPPPPPDAPPP
64 64 A H E -c 44 0A 53 30 76 HHHISYRGSIrRFPIRRRRrRRrRVPRrR
65 65 A M + 0 0 15 9 64 MMM....L..e........i..l....e.
66 66 A S > + 0 0 58 14 93 SSPPPY.L.SM.Y......L..L....M.
67 67 A R T 4 S- 0 0 166 17 55 RRRRRS.ERRK.SR.....E..E..R.K.
68 68 A G T 4 S- 0 0 6 29 46 GGGGGKGFGGIGPGQGGGGSGGGG.GGIG
69 69 A K T 4 S- 0 0 7 29 78 KKMLLTLAMLAVNLELTVVALVAV.MHAL
70 70 A L S X S+ 0 0 1 30 51 LLLVIFLALLQLFLLLLLLCLLALKLLQL
71 71 A E H >> S+ 0 0 21 30 22 EEEDDEEDEEHEKEEEEEEEEEDEEEEHE
72 72 A P H 34 S+ 0 0 31 30 85 PPFVINFPFFPYEFQFFFFWFFPFVFAPF
73 73 A L H 3> S+ 0 0 36 30 88 LLWKIESTRRVREQNKVRKNMRNRNFQLK
74 74 A L H XX S+ 0 0 0 30 65 LLLAALISAAVALVILALIYLLTLFAIVL
75 75 A A H 3< S+ 0 0 31 30 69 AADAANWADPNAKDEGDGGESGPGEDENS
76 76 A K H 34 S+ 0 0 157 30 80 KKpVKRsrpAhSKpRspntetnhnkpGhn
77 77 A S H << S- 0 0 39 25 72 SSkGG.pdk.a..a.psaeleaaakaKsa
78 78 A G < + 0 0 43 27 87 GGDYS.DAHQLD.K.EEECVSELETEILQ
79 79 A L - 0 0 4 30 40 LLILLLLLLVALLLIYLLAMLLVLLFIKL
80 80 A D > - 0 0 12 30 57 DDTKKDDDADdpDAPdQaDAqanaDDDea
81 81 A P T 3 S+ 0 0 34 29 64 PPPPTK.PKVarKAKrPpKRrprpPPKsr
82 82 A E T 3 S+ 0 0 104 29 60 EEDNEN.SDNEGNSDDNNGNSNDNSKTQT
83 83 A K S < S- 0 0 45 30 76 KKKNQKEAREKAKSKLTIKRRIKVRRAKL
84 84 A P + 0 0 22 30 69 PPTTTTTRPRDRTRQKRPPERPPPPRPDK
85 85 A V E -bd 41 110A 0 30 52 VVKYIYIVVIIIYLVVTIYVYIVIVIVIL
86 86 A V E -bd 42 111A 0 30 51 VVVVVLYIIYYVLVIVIILVLIAMAIVYV
87 87 A V E -bd 43 112A 2 30 25 VVLVVVVVVVLVILVLLLIVLLVLVVVIL
88 88 A F E +b 44 0A 0 30 50 FFYIYYYYYIIHYYHYHYYVYYMYYHYIY
89 89 A C + 0 0 11 30 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
90 90 A K + 0 0 30 30 67 KKAKKRRRAKGARGAKAQRRKQAQRAAKK
91 91 A T S S+ 0 0 43 30 54 TTSTKTSSSSTATSATGTTSTTTTSAGTN
92 92 A A S S+ 0 0 58 30 27 AANGGGGGGGGGGGGSGGSGSGGGGGGGS
93 93 A A S S- 0 0 8 30 64 AAWGSHATGAAGHAVGGGGQGGGGVGVGG
94 94 A R >> + 0 0 9 30 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRR
95 95 A A H 3> S+ 0 0 0 30 44 AASAGSAASGSGTSSASAASAAAASSSSS
96 96 A A H 3> S+ 0 0 1 30 38 AAATLGAAAIAASAAAAAAVAAAARAAAA
97 97 A L H <4 S+ 0 0 36 30 19 LLLLLLLLLFLLLLKLLLLLLLMLKLFLL
98 98 A A H < S+ 0 0 1 30 17 AAAAAAAAAAAAAAASAASASASAAAAAA
99 99 A G H X S+ 0 0 0 30 57 GGAgAVAAGSTAMACALATAAAVAAAVTA
100 100 A K H X S+ 0 0 39 30 81 KKLkAEKLKKQKPKKCKWVNKWQWRDQLD
101 101 A T H > S+ 0 0 1 30 77 TTTLSVQTVASTLSLATSQSTSRSKTTSA
102 102 A L H >>>S+ 0 0 2 30 12 LLIVLMMLLLLLFLLMLLLLMLLLLLMLL
103 103 A R H 3<5S+ 0 0 83 30 58 RRQKHKQQKIQQKKKQQKQQEKRKAQEQR
104 104 A E H 3<5S+ 0 0 99 30 63 EEEQEEETDDREEEDDACKVECECEQEKE
105 105 A Y H <<5S- 0 0 56 30 42 YYMYLLLLLLMMLMKMLLILMLMLKMLMM
106 106 A G T <5 + 0 0 42 30 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGG
107 107 A F < - 0 0 12 30 13 FFFFFFYFYYFYFVLYYYYFYYFYFYYFY
108 108 A K S S+ 0 0 159 29 72 KKNKKKTTEPETKEKARTSKLTGT.TTTR
109 109 A T + 0 0 51 30 66 TTNHKKNHKSKDENEQNDDNHDQDRNNKN
110 110 A I E - d 0 85A 7 30 35 IIVVIVVVVVIVVVLVVALVVAVAVVALV
111 111 A Y E -ad 23 86A 32 30 83 YYSYYYYAFTFAYVYKATIAKTVVYAMFL
112 112 A N E -ad 24 87A 0 30 69 NNHVNNSNNNSNNHNSHLSSSLNLNHSSS
113 113 A S E -a 25 0A 0 30 47 SSILLMVLLVVMMVMILIMLIIVILLMVL
114 114 A E S S+ 0 0 80 29 74 EEKKKMSE.VQELPELEAAEDAAADEDQA
115 115 A G S S- 0 0 14 30 16 GGGGGGTGGGGGGGGGGGGTGGGGKGGGG
116 116 A G >> - 0 0 5 30 3 GGGGGGGGAGGGGGGGGGGGGGGGGGGGG
117 117 A M H 3> S+ 0 0 10 30 50 MMFMIISFFMMLIFIFFYFIFYIYFIYII
118 118 A D H 3> S+ 0 0 78 30 76 DDQVHAVVKDQGTSNDKDERDDKDLKGQE
119 119 A K H <> S+ 0 0 57 30 59 KKAGAEDADAAAAAKAAAVGAAGASARTA
120 120 A W H <>S+ 0 0 1 30 12 WWMWWWWWWWWWWLWWWWWWWWWWWWWWW
121 121 A L H ><5S+ 0 0 58 28 84 LLVMMEAKAMIRKKQAV NKKRER SKLQ
122 122 A E H 3<5S+ 0 0 116 28 52 EEDKEAQEEAEENEEAE TDEAAA EDNA
123 123 A E T 3<5S- 0 0 79 28 65 EEEADKSAAEARRAEAA EYSAEA AEEA
124 124 A G T < 5 + 0 0 67 27 21 GGGGGGGGGGGGGGGGN GDG DE GGNG
125 125 A L < - 0 0 18 22 77 LLFYYLYL YL Y YKK RLK L R LR
126 126 A P + 0 0 39 21 16 PP TPPPP PP P PPP PPP P P PE
127 127 A S E -E 57 0B 34 16 71 SS V V W VT V VV TLV V L
128 128 A L E +E 56 0B 91 14 47 LL V V I I V AI VA V L
129 129 A D - 0 0 71 10 65 DD N E K DH K T
130 130 A R - 0 0 197 6 72 K H P P P
131 131 A S + 0 0 97 4 37 S S T
132 132 A H + 0 0 104 1 0
133 133 A H + 0 0 184 1 0
134 134 A H + 0 0 185 1 0
135 135 A H + 0 0 108 1 0
136 136 A H 0 0 178 1 0
137 137 A H 0 0 235 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 3 0 0 0.000 0 1.00
3 3 A 0 13 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0.377 12 0.96
4 4 A 0 0 0 0 0 0 0 89 0 0 11 0 0 0 0 0 0 0 0 0 9 0 0 0.349 11 0.84
5 5 A 0 0 11 0 0 0 0 11 0 0 0 0 0 0 0 11 0 67 0 0 9 0 0 1.003 33 0.36
6 6 A 0 11 0 0 0 0 0 0 0 11 11 0 0 0 0 67 0 0 0 0 9 0 0 1.003 33 0.29
7 7 A 0 9 9 18 27 0 9 0 0 0 0 0 0 0 27 0 0 0 0 0 11 0 0 1.673 55 0.16
8 8 A 25 0 0 0 8 0 0 0 25 0 0 8 0 0 0 0 0 0 0 33 12 0 0 1.474 49 0.11
9 9 A 0 0 0 0 0 0 0 0 25 0 25 13 0 6 6 25 0 0 0 0 16 0 0 1.646 54 0.22
10 10 A 0 0 6 0 0 0 0 0 0 0 6 71 0 0 6 12 0 0 0 0 17 0 0 0.998 33 0.51
11 11 A 0 16 0 5 32 0 5 0 16 16 5 5 0 0 0 0 0 0 0 0 19 0 0 1.858 62 0.15
12 12 A 0 5 0 0 0 0 0 0 0 0 0 0 0 10 5 38 24 5 0 14 21 0 0 1.646 54 0.36
13 13 A 0 0 0 0 0 4 0 0 30 0 0 0 0 0 0 0 13 13 0 39 23 0 0 1.397 46 0.37
14 14 A 4 61 0 4 0 0 0 0 0 0 0 0 0 0 0 4 17 4 0 4 23 0 0 1.288 42 0.39
15 15 A 66 10 14 3 0 0 0 0 0 0 0 3 0 0 0 3 0 0 0 0 29 0 0 1.133 37 0.68
16 16 A 3 7 0 0 0 0 0 0 17 0 10 7 0 0 0 21 17 14 0 3 29 0 0 2.041 68 0.20
17 17 A 0 0 0 0 0 0 0 3 41 3 0 0 0 0 0 0 7 34 0 10 29 0 0 1.384 46 0.47
18 18 A 0 0 0 0 0 0 0 0 76 0 0 7 3 0 0 0 0 7 3 3 29 0 0 0.927 30 0.64
19 19 A 0 0 0 3 0 0 0 0 7 0 3 0 0 0 28 48 0 0 7 3 29 0 0 1.424 47 0.46
20 20 A 3 3 0 0 0 0 0 3 31 0 14 7 0 3 3 21 10 0 0 0 29 0 0 1.962 65 0.22
21 21 A 7 0 7 0 0 0 3 3 3 0 7 7 0 7 14 0 21 10 0 10 29 0 0 2.339 78 0.14
22 22 A 38 0 31 10 3 0 3 0 0 0 0 14 0 0 0 0 0 0 0 0 29 0 0 1.471 49 0.52
23 23 A 10 0 0 0 0 0 0 0 0 7 0 14 0 3 14 21 7 21 3 0 29 0 0 2.034 67 0.21
24 24 A 0 0 0 10 0 0 3 0 3 0 3 0 0 0 3 0 10 45 17 3 29 0 0 1.713 57 0.33
25 25 A 23 30 43 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 1 0 1.177 39 0.71
26 26 A 0 0 0 3 0 0 0 3 3 3 55 10 0 0 0 3 0 0 0 17 29 0 0 1.446 48 0.42
27 27 A 33 7 7 0 0 0 0 0 0 43 3 7 0 0 0 0 0 0 0 0 30 0 0 1.384 46 0.37
28 28 A 3 3 0 0 0 3 0 0 17 3 10 0 0 0 0 17 10 17 0 17 30 0 0 2.109 70 0.21
29 29 A 0 0 0 0 0 0 0 3 7 0 0 13 0 0 0 0 17 23 0 37 30 0 0 1.569 52 0.49
30 30 A 20 23 0 0 7 0 0 0 47 0 0 0 0 0 0 0 3 0 0 0 30 0 0 1.311 43 0.35
31 31 A 3 0 3 0 7 0 17 0 7 0 7 0 0 3 7 23 7 13 3 0 30 1 0 2.263 75 0.06
32 32 A 0 0 0 0 0 0 0 0 17 0 0 0 0 3 3 28 10 38 0 0 29 0 0 1.493 49 0.38
33 33 A 7 33 3 7 0 3 0 0 13 0 0 0 0 0 17 7 3 7 0 0 30 0 0 1.996 66 0.18
34 34 A 3 40 33 10 0 3 3 0 0 0 0 0 0 0 0 0 3 3 0 0 30 0 0 1.530 51 0.52
35 35 A 3 7 0 0 0 0 0 10 3 0 7 7 0 0 10 7 20 10 0 17 30 0 0 2.260 75 0.21
36 36 A 0 0 0 0 0 0 0 3 17 0 7 7 0 3 0 13 7 23 0 20 30 0 0 1.997 66 0.33
37 37 A 0 0 0 0 0 0 0 33 13 0 3 3 0 3 3 7 0 3 23 7 30 11 2 1.902 63 0.34
38 38 A 0 0 0 0 0 0 0 5 0 47 0 0 0 0 0 16 5 21 5 0 19 0 0 1.438 48 0.34
39 39 A 0 0 0 0 0 0 0 4 4 0 0 4 0 0 0 13 4 4 8 58 24 0 0 1.444 48 0.54
40 40 A 14 7 28 0 14 3 0 0 14 0 0 10 0 0 0 0 0 0 0 10 29 0 0 1.945 64 0.22
41 41 A 23 17 13 0 3 0 0 0 13 0 0 23 0 0 0 0 7 0 0 0 30 0 0 1.809 60 0.29
42 42 A 20 50 27 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 1 0 1.134 37 0.71
43 43 A 14 17 69 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.833 27 0.80
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 30 0 0 0.000 0 1.00
45 45 A 87 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.393 13 0.93
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 30 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 60 0 23 30 0 0 0.945 31 0.64
48 48 A 0 0 3 0 0 0 3 3 10 73 0 0 0 0 0 0 0 7 0 0 30 0 0 0.978 32 0.57
49 49 A 0 0 0 0 0 0 7 3 10 3 3 0 0 0 3 0 0 33 10 27 30 0 0 1.813 60 0.36
50 50 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 30 0 0 0.000 0 1.00
51 51 A 10 13 0 0 23 10 30 0 0 0 0 3 0 3 3 0 3 0 0 0 30 0 0 1.883 62 0.41
52 52 A 7 3 0 0 0 0 0 7 20 0 10 0 0 0 0 17 10 23 0 3 30 0 0 2.008 67 0.24
53 53 A 7 0 0 0 0 0 0 0 50 0 3 0 0 0 0 13 10 10 3 3 30 0 0 1.596 53 0.36
54 54 A 3 0 3 13 0 0 0 47 10 0 3 10 3 3 0 0 0 3 0 0 30 0 0 1.765 58 0.30
55 55 A 3 0 7 0 0 0 0 23 7 0 3 3 0 50 0 3 0 0 0 0 30 0 0 1.501 50 0.24
56 56 A 13 20 47 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0 3 30 1 0 1.358 45 0.45
57 57 A 3 0 7 0 0 0 0 7 0 52 0 0 0 0 3 3 0 7 0 17 29 0 0 1.546 51 0.33
58 58 A 0 0 0 0 3 3 0 34 10 3 10 0 0 3 7 0 0 0 7 17 29 0 0 1.973 65 0.25
59 59 A 13 0 7 0 0 0 0 7 57 0 17 0 0 0 0 0 0 0 0 0 30 0 0 1.250 41 0.46
60 60 A 13 13 27 0 0 0 3 3 10 0 0 0 0 0 0 17 3 3 7 0 30 0 0 2.053 68 0.17
61 61 A 13 13 0 0 0 0 3 3 0 0 0 3 0 7 0 0 0 0 57 0 30 0 0 1.380 46 0.30
62 62 A 17 0 40 3 7 0 10 0 3 3 3 0 0 3 0 3 0 3 3 0 30 0 0 1.983 66 0.28
63 63 A 3 0 3 0 0 0 0 0 3 50 3 3 0 3 3 17 0 0 3 7 30 0 0 1.733 57 0.32
64 64 A 3 0 10 0 3 0 3 3 0 7 7 0 0 13 50 0 0 0 0 0 30 21 4 1.660 55 0.24
65 65 A 0 22 11 44 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 9 0 0 1.273 42 0.36
66 66 A 0 21 0 14 0 0 14 0 0 21 29 0 0 0 0 0 0 0 0 0 14 0 0 1.574 52 0.07
67 67 A 0 0 0 0 0 0 0 0 0 0 12 0 0 0 59 12 0 18 0 0 17 0 0 1.122 37 0.45
68 68 A 0 0 7 0 3 0 0 76 0 3 3 0 0 0 0 3 3 0 0 0 29 0 0 0.975 32 0.54
69 69 A 17 28 0 10 0 0 0 0 17 0 0 7 0 3 0 10 0 3 3 0 29 0 0 1.964 65 0.22
70 70 A 3 67 3 0 7 0 0 0 7 0 0 0 3 0 0 3 7 0 0 0 30 0 0 1.265 42 0.49
71 71 A 0 0 0 0 0 0 0 0 0 0 0 0 0 7 0 3 0 77 0 13 30 0 0 0.766 25 0.77
72 72 A 7 0 3 0 47 3 3 0 3 23 0 0 0 0 0 0 3 3 3 0 30 0 0 1.669 55 0.14
73 73 A 7 13 3 3 3 3 0 0 0 0 3 3 0 0 20 13 7 7 13 0 30 0 0 2.350 78 0.11
74 74 A 10 40 13 0 3 0 3 0 23 0 3 3 0 0 0 0 0 0 0 0 30 0 0 1.658 55 0.34
75 75 A 0 0 0 0 0 3 0 17 23 7 7 0 0 0 0 3 0 13 10 17 30 0 0 2.024 67 0.30
76 76 A 3 0 0 0 0 0 0 3 3 17 10 7 0 10 10 20 0 3 13 0 30 5 19 2.214 73 0.20
77 77 A 0 4 0 0 0 0 0 8 32 8 20 0 0 0 0 16 0 8 0 4 25 0 0 1.843 61 0.28
78 78 A 4 11 4 0 0 0 4 11 4 0 7 4 4 4 0 4 7 22 0 11 27 0 0 2.429 81 0.12
79 79 A 7 63 10 3 3 0 3 0 7 0 0 0 0 0 0 3 0 0 0 0 30 0 0 1.334 44 0.60
80 80 A 0 0 0 0 0 0 0 0 23 7 0 3 0 0 0 7 7 3 3 47 30 1 10 1.577 52 0.43
81 81 A 3 0 0 0 0 0 0 0 7 41 3 3 0 0 21 21 0 0 0 0 29 0 0 1.550 51 0.35
82 82 A 0 0 0 0 0 0 0 7 0 0 14 7 0 0 0 3 3 17 31 17 29 0 0 1.844 61 0.40
83 83 A 3 7 7 0 0 0 0 0 10 0 3 3 0 0 17 37 3 7 3 0 30 0 0 2.005 66 0.23
84 84 A 0 0 0 0 0 0 0 0 0 37 0 20 0 0 23 7 3 3 0 7 30 0 0 1.617 53 0.31
85 85 A 37 7 33 0 0 0 17 0 0 0 0 3 0 0 0 3 0 0 0 0 30 0 0 1.440 48 0.48
86 86 A 40 13 23 3 0 0 13 0 7 0 0 0 0 0 0 0 0 0 0 0 30 0 0 1.537 51 0.49
87 87 A 57 33 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.918 30 0.75
88 88 A 3 0 13 3 10 0 57 0 0 0 0 0 0 13 0 0 0 0 0 0 30 0 0 1.316 43 0.49
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 30 0 0 0.000 0 1.00
90 90 A 0 0 0 0 0 0 0 7 27 0 0 0 0 0 23 33 10 0 0 0 30 0 0 1.469 49 0.32
91 91 A 0 0 0 0 0 0 0 7 10 0 27 50 0 0 0 3 0 0 3 0 30 0 0 1.337 44 0.46
92 92 A 0 0 0 0 0 0 0 73 10 0 13 0 0 0 0 0 0 0 3 0 30 0 0 0.840 28 0.73
93 93 A 10 0 0 0 0 3 0 47 23 0 3 3 0 7 0 0 3 0 0 0 30 0 0 1.560 52 0.36
94 94 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 30 0 0 0.000 0 1.00
95 95 A 0 0 0 0 0 0 0 10 43 0 43 3 0 0 0 0 0 0 0 0 30 0 0 1.068 35 0.55
96 96 A 3 3 3 0 0 0 0 3 77 0 3 3 0 0 3 0 0 0 0 0 30 0 0 0.997 33 0.61
97 97 A 0 83 0 3 7 0 0 0 0 0 0 0 0 0 0 7 0 0 0 0 30 0 0 0.626 20 0.80
98 98 A 0 0 0 0 0 0 0 0 87 0 13 0 0 0 0 0 0 0 0 0 30 0 0 0.393 13 0.82
99 99 A 10 3 0 3 0 0 0 17 50 0 3 10 3 0 0 0 0 0 0 0 30 0 1 1.559 52 0.42
100 100 A 3 10 0 0 0 10 0 0 3 3 0 0 3 0 3 40 10 3 3 7 30 0 0 2.031 67 0.18
101 101 A 7 10 0 0 0 0 0 0 10 0 27 33 0 0 3 3 7 0 0 0 30 0 0 1.767 58 0.23
102 102 A 3 73 3 17 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.866 28 0.88
103 103 A 0 0 3 0 0 0 0 0 3 0 0 0 0 3 17 30 37 7 0 0 30 0 0 1.548 51 0.42
104 104 A 3 0 0 0 0 0 0 0 3 0 0 3 10 0 3 7 7 50 0 13 30 0 0 1.660 55 0.36
105 105 A 0 43 3 33 0 0 13 0 0 0 0 0 0 0 0 7 0 0 0 0 30 0 0 1.291 43 0.57
106 106 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.000 0 1.00
107 107 A 3 3 0 0 47 0 47 0 0 0 0 0 0 0 0 0 0 0 0 0 30 1 0 0.938 31 0.87
108 108 A 0 3 0 0 0 0 0 3 3 3 3 31 0 0 7 31 0 10 3 0 29 0 0 1.842 61 0.28
109 109 A 0 0 0 0 0 0 0 0 0 0 3 10 0 10 3 17 7 7 27 17 30 0 0 1.998 66 0.33
110 110 A 60 10 17 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 30 0 0 1.104 36 0.65
111 111 A 10 3 3 3 10 0 33 0 17 0 3 10 0 0 0 7 0 0 0 0 30 0 0 1.990 66 0.16
112 112 A 3 10 0 0 0 0 0 0 0 0 30 0 0 13 0 0 0 0 43 0 30 0 0 1.336 44 0.30
113 113 A 20 30 20 20 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 30 1 0 1.557 51 0.52
114 114 A 3 7 0 3 0 0 0 0 21 3 3 0 0 0 0 10 7 31 0 10 29 0 0 1.992 66 0.26
115 115 A 0 0 0 0 0 0 0 90 0 0 0 7 0 0 0 3 0 0 0 0 30 0 0 0.389 12 0.83
116 116 A 0 0 0 0 0 0 0 97 3 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.146 4 0.96
117 117 A 0 3 30 20 30 0 13 0 0 0 3 0 0 0 0 0 0 0 0 0 30 0 0 1.540 51 0.49
118 118 A 10 3 0 0 0 0 0 7 3 0 3 3 0 3 3 13 10 7 3 30 30 0 0 2.245 74 0.24
119 119 A 3 0 0 0 0 0 0 10 53 0 3 3 0 0 3 13 0 3 0 7 30 0 0 1.582 52 0.40
120 120 A 0 3 0 3 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.291 9 0.87
121 121 A 7 14 4 11 0 0 0 0 11 0 4 0 0 0 11 21 7 7 4 0 28 0 0 2.249 75 0.15
122 122 A 0 0 0 0 0 0 0 0 25 0 0 4 0 0 0 4 4 46 7 11 28 0 0 1.488 49 0.47
123 123 A 0 0 0 0 0 0 4 0 39 0 7 0 0 0 7 4 0 36 0 4 28 0 0 1.469 49 0.34
124 124 A 0 0 0 0 0 0 0 81 0 0 0 0 0 0 0 0 0 4 7 7 27 0 0 0.675 22 0.78
125 125 A 0 41 0 0 5 0 27 0 0 0 0 0 0 0 14 14 0 0 0 0 22 0 0 1.404 46 0.22
126 126 A 0 0 0 0 0 0 0 0 0 90 0 5 0 0 0 0 0 5 0 0 21 0 0 0.381 12 0.84
127 127 A 50 13 0 0 0 6 0 0 0 0 19 13 0 0 0 0 0 0 0 0 16 0 0 1.354 45 0.29
128 128 A 36 29 21 0 0 0 0 0 14 0 0 0 0 0 0 0 0 0 0 0 14 0 0 1.334 44 0.52
129 129 A 0 0 0 0 0 0 0 0 0 0 0 10 0 10 0 20 0 10 10 40 10 0 0 1.609 53 0.34
130 130 A 0 0 0 0 0 0 0 0 0 50 0 0 0 17 17 17 0 0 0 0 6 0 0 1.242 41 0.28
131 131 A 0 0 0 0 0 0 0 0 0 0 75 25 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.62
132 132 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
133 133 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
134 134 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
135 135 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
136 136 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
137 137 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
3 51 70 6 pESPYYKk
4 97 117 1 gAk
6 27 54 3 nKGNp
7 67 96 2 sIAp
8 62 76 2 rHHd
9 65 66 6 pDSPLHDk
11 51 58 3 rGMLe
11 63 73 6 hYCEVERa
11 67 83 1 dLa
12 71 71 1 pDr
13 24 41 3 nKNNp
14 68 69 6 pESPTHNa
16 64 65 1 sMp
16 68 70 1 dSr
17 59 66 6 pSSPLYKs
18 71 308 1 nTa
18 75 313 1 aDp
19 60 65 2 tVGe
20 55 58 1 rGi
20 67 71 4 eTEPEl
21 64 65 1 tDe
21 68 70 1 qDr
22 71 312 1 nTa
22 75 317 1 aDp
23 51 60 1 rGl
23 63 73 3 hRIEa
23 67 80 1 nAr
24 71 309 1 nTa
24 75 314 1 aDp
25 68 83 2 kNIk
26 60 69 6 pASPYHRa
28 56 58 3 rGLLe
28 68 73 6 hHCDEDIs
28 72 83 1 eLs
29 60 65 1 nDa
29 64 70 1 aEr
//