Complet list of 1qn1 hssp file
Complete list of 1qn1.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1QN1
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-07
HEADER ELECTRON TRANSPORT 11-OCT-99 1QN1
COMPND MOL_ID: 1; MOLECULE: CYTOCHROME C3; CHAIN: A; SYNONYM: TETRAHEME CYTOC
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: DESULFOVIBRIO GIGAS; ORGANISM_TAXID: 8
AUTHOR L.BRENNAN,A.C.MESSIAS,J.LEGALL,D.L.TURNER,A.V.XAVIER
DBREF 1QN1 A 1 112 UNP P00133 CYC3_DESGI 1 112
SEQLENGTH 112
NCHAIN 1 chain(s) in 1QN1 data set
NALIGN 28
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q9RM62_DESGI 1.00 1.00 1 112 26 137 112 0 0 137 Q9RM62 Cytochrome c3 OS=Desulfovibrio gigas GN=cyc PE=4 SV=1
2 : T2G7I6_DESGI 1.00 1.00 1 112 26 137 112 0 0 137 T2G7I6 Cytochrome c3 OS=Desulfovibrio gigas DSM 1382 = ATCC 19364 GN=cyc PE=4 SV=1
3 : CYC3_DESGI 1WAD 0.99 1.00 1 112 1 112 112 0 0 112 P00133 Cytochrome c3 OS=Desulfovibrio gigas PE=1 SV=2
4 : G2HAW1_9DELT 0.56 0.69 23 111 42 130 90 2 2 130 G2HAW1 Cytochrome c3 OS=Desulfovibrio sp. A2 GN=DA2_2915 PE=4 SV=1
5 : CYC3_DESVM 2Z47 0.49 0.65 13 111 32 130 100 2 2 130 P00132 Cytochrome c3 OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM 19637) GN=DvMF_2499 PE=1 SV=2
6 : Q30WH0_DESDG2A3P 0.49 0.69 1 111 19 130 112 1 1 130 Q30WH0 Cytochrome c class III (Precursor) OS=Desulfovibrio desulfuricans (strain G20) GN=Dde_3182 PE=1 SV=1
7 : Q9RF05_DESDE 0.49 0.69 1 111 19 130 112 1 1 130 Q9RF05 Cytochrome c3 (Precursor) OS=Desulfovibrio desulfuricans GN=cycA PE=4 SV=1
8 : A1V9X3_DESVV 0.48 0.61 3 110 21 128 109 2 2 129 A1V9X3 Cytochrome c, class III (Precursor) OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=Dvul_0215 PE=4 SV=1
9 : CYC3_DESVH 1MDV 0.48 0.61 3 110 21 128 109 2 2 129 P00131 Cytochrome c3 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=DVU_3171 PE=1 SV=1
10 : E3IQX1_DESVR 0.48 0.61 3 110 21 128 109 2 2 129 E3IQX1 Cytochrome c, class III, conserved region (Precursor) OS=Desulfovibrio vulgaris (strain RCH1) GN=Deval_2928 PE=4 SV=1
11 : T2G7I8_DESGI 0.42 0.65 2 112 22 133 112 1 1 133 T2G7I8 Cytochrome c class III OS=Desulfovibrio gigas DSM 1382 = ATCC 19364 GN=DGI_0326 PE=4 SV=1
12 : B6WXU8_9DELT 0.40 0.55 14 111 34 135 102 2 4 135 B6WXU8 Cytochrome c3 OS=Desulfovibrio piger ATCC 29098 GN=DESPIG_02928 PE=4 SV=1
13 : Q9FDJ8_DESDE 0.39 0.52 2 111 19 128 111 2 2 128 Q9FDJ8 Cytochrome c3 (Precursor) OS=Desulfovibrio desulfuricans PE=4 SV=1
14 : C6BUH4_DESAD 0.38 0.55 22 111 47 133 93 5 9 137 C6BUH4 Cytochrome c class III (Precursor) OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=Desal_1922 PE=4 SV=1
15 : B8J2Z0_DESDA2KSU 0.37 0.49 18 111 35 128 95 2 2 128 B8J2Z0 Cytochrome c class III (Precursor) OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=Ddes_2013 PE=1 SV=1
16 : L0REF7_9DELT 0.37 0.56 18 112 45 136 97 4 7 139 L0REF7 Cytochrome c class III OS=Desulfovibrio hydrothermalis AM13 = DSM 14728 GN=DESAM_22330 PE=4 SV=1
17 : Q9L915_DESDE1UP9 0.37 0.49 18 111 35 128 95 2 2 128 Q9L915 Cytochrome c3 (Precursor) OS=Desulfovibrio desulfuricans GN=cytc3 PE=1 SV=2
18 : G1UXA9_9DELT 0.36 0.53 19 111 37 129 94 2 2 129 G1UXA9 Uncharacterized protein OS=Desulfovibrio sp. 6_1_46AFAA GN=HMPREF1022_03232 PE=4 SV=1
19 : C4XGG7_DESMR 0.35 0.51 1 91 26 113 92 3 5 128 C4XGG7 Cytochrome c3 OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=DMR_02560 PE=4 SV=1
20 : D9YC16_9DELT 0.34 0.51 13 111 31 129 100 2 2 129 D9YC16 Uncharacterized protein OS=Desulfovibrio sp. 3_1_syn3 GN=HMPREF0326_01176 PE=4 SV=1
21 : G7Q9B6_9DELT 0.34 0.50 1 91 26 113 92 3 5 128 G7Q9B6 Cytochrome c, class III, conserved region OS=Desulfovibrio sp. FW1012B GN=DFW101_2153 PE=4 SV=1
22 : I2PYE7_9DELT 0.34 0.50 1 91 26 113 92 3 5 128 I2PYE7 Class III cytochrome C family protein (Precursor) OS=Desulfovibrio sp. U5L GN=DesU5LDRAFT_0852 PE=4 SV=1
23 : K6GTK6_9DELT 0.34 0.51 1 91 26 113 92 3 5 128 K6GTK6 Class III cytochrome C family protein (Precursor) OS=Desulfovibrio magneticus str. Maddingley MBC34 GN=B193_0988 PE=4 SV=1
24 : C0QHA6_DESAH 0.32 0.54 16 112 44 139 100 4 7 142 C0QHA6 Cytochrome c, class III family protein OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=HRM2_47160 PE=4 SV=1
25 : D9YHI1_9DELT 0.32 0.56 2 98 27 122 98 2 3 141 D9YHI1 Uncharacterized protein OS=Desulfovibrio sp. 3_1_syn3 GN=HMPREF0326_02960 PE=4 SV=1
26 : G1UX31_9DELT 0.32 0.56 2 98 28 123 98 2 3 142 G1UX31 Uncharacterized protein OS=Desulfovibrio sp. 6_1_46AFAA GN=HMPREF1022_03154 PE=4 SV=1
27 : F0JIY2_DESDE 0.31 0.47 19 104 45 132 90 4 6 135 F0JIY2 Cytochrome c, class III, conserved region (Precursor) OS=Desulfovibrio desulfuricans ND132 GN=DND132_2678 PE=4 SV=1
28 : K1YNL0_9BACT 0.31 0.47 1 100 22 127 110 4 14 139 K1YNL0 Cytochrome c, class III OS=uncultured bacterium GN=ACD_75C00619G0002 PE=4 SV=1
## ALIGNMENTS 1 - 28
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A V 0 0 139 11 24 VVV LL V VVV L
2 2 A D - 0 0 154 15 63 DDD PP A A D EED NN A
3 3 A V - 0 0 94 18 58 VVV VVVVVV L A AAA LL F
4 4 A P - 0 0 77 18 62 PPP IIAAAA A P PPP SS A
5 5 A A - 0 0 67 18 23 AAA AAAAAA A A AAA NN A
6 6 A D E S+A 25 0A 82 18 72 DDD AAPPPP P D DDD II D
7 7 A G E + 0 0A 38 18 83 GGG EEKKKQ T G MLG KK P
8 8 A A E -A 24 0A 44 18 63 AAA AAAAAS A E TTE KK G
9 9 A K E -A 23 0A 136 18 72 KKK PPPPPP P I IIV PP P
10 10 A I E +A 22 0A 51 18 86 III AAAAAS D K KKK II A
11 11 A D + 0 0 49 18 64 DDD DDDDDS K A VVA EE E
12 12 A F + 0 0 98 18 97 FFF GGGGGP P P PPP LL I
13 13 A I S S- 0 0 78 20 80 III LLLLLLL L ELAAA NN T
14 14 A A - 0 0 100 21 80 AAA KKKKKKTQE GEGGG GG L
15 15 A G - 0 0 17 21 76 GGG MMMMMMLGF MLMMF GG G
16 16 A G - 0 0 59 22 75 GGG DEEEEERSK PKTTASTT E
17 17 A E S S+ 0 0 187 22 71 EEE KNNAAAYNG AGAAAESS G
18 18 A K S S- 0 0 166 25 73 KKK TTTTTTLPA SKS TSTTTRKK G
19 19 A N - 0 0 68 27 55 NNN KKKKKKKKQ QDQKQKQQQDRRKK
20 20 A L + 0 0 101 27 83 LLL QMMQQQKKK KLKKSKAASLMMTK
21 21 A T - 0 0 58 27 73 TTT PPPPPPEPT TGTTPTEEPSFFPP
22 22 A V E -A 10 0A 36 28 7 VVV VVVVVVVVVVVVVVVVVVVVVVVA
23 23 A V E -A 9 0A 74 29 60 VVVVVIIVVVVTMVMVMMKMAAKMTTVV
24 24 A F E -A 8 0A 60 29 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFF
25 25 A N E > -A 6 0A 53 29 58 NNNNNNNNNNPNPNPNPPSPSSSNNNPP
26 26 A H G > S+ 0 0 51 29 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHH
27 27 A S G 3 S+ 0 0 81 29 54 SSSSSSSSSSASASASAAKAKKKSSSKK
28 28 A T G < S+ 0 0 78 29 67 TTTTTSSTTTATPSPSPPGPGGGSSSKK
29 29 A H S X S+ 0 0 70 29 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHH
30 30 A K T 3 S+ 0 0 185 29 71 KKKKKSSKKKGKAEEEEQAQAAAEKKVQ
31 31 A D T 3 S+ 0 0 140 29 71 DDDAASSSSSATKNKNKKKKKKKSGGDD
32 32 A V S < S- 0 0 35 29 51 VVVVVYYVVVLVVYVYVVIVIIVYVVga
33 33 A K >> - 0 0 153 29 52 KKKKKQQKKKEEEEEDEEDEDDDDKKdk
34 34 A C H 3> S+ 0 0 112 29 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCC
35 35 A D H 34 S+ 0 0 92 29 89 DDDGGAAGGGRVVIVAVVKVKKKSRRLA
36 36 A D H <4 S+ 0 0 31 29 67 DDDDDDDDDDTITDTDTTATVVVETTVD
37 37 A C H < S+ 0 0 73 29 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCC
38 38 A H < + 0 0 74 29 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHH
39 39 A H + 0 0 106 29 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHH
40 40 A Q - 0 0 45 29 81 QQDppppppppplnlNlkKkKKKkeekg
41 41 A P - 0 0 94 24 82 PPPnndnnnnddnkd.dq.q...kllta
42 42 A G S > S+ 0 0 29 25 57 GGGGGGGGGGGGGKGIGD.D...LPPSD
43 43 A D T 4 S+ 0 0 170 29 62 DDDKKKKKKKEKKSKKKKGKGGGLKKKG
44 44 A K T >4 S+ 0 0 93 29 45 KKKEEEEEEENEEGEKEEEEEEEKDDDK
45 45 A Q T 34 S+ 0 0 62 29 74 QQQDDNNDDDPSSESSSNANAAAERRDQ
46 46 A Y T 3< S+ 0 0 165 29 77 YYYYYLLYYYMYFPYGYFTFTTTgYYVv
47 47 A A S < S- 0 0 31 29 68 AAAQQAARRRPAATAKAQQQQQQpAAKe
48 48 A G - 0 0 45 29 56 GGGKKKKKKKKKKSKPKKKKKKKPSSGK
49 49 A C S S+ 0 0 53 29 16 CCCCCCCCCCCCCCCTCCCCCCCRCCCC
50 50 A T S S+ 0 0 27 28 57 TTTAAAAGGGSAG.GSGASAAASSTTAE
51 51 A T S S- 0 0 74 28 58 TTTTTTTTTTETS.SCSTSTSSSCNNST
52 52 A D S S+ 0 0 139 29 47 DDDAAAAAAAAAAASASAAAAAAAEEEC
53 53 A G S S+ 0 0 63 29 33 GGGGGGGGGGGGGTGSGGGGGGGTEEGH
54 54 A C S S- 0 0 29 29 10 CCCCCCCCCCCCCCCCCCCCCCCCCCCN
55 55 A H S S+ 0 0 26 29 7 HHHHHHHHHHHHHHHHHHHHHHHHHHHP
56 56 A N + 0 0 67 29 42 NNNDDDDDDDDDDDDDDDDDDDDTSSIN
57 57 A I B -b 67 0B 52 29 81 IIISNVVSSSVNDNDNDDSDSSSGIIDV
58 58 A L + 0 0 93 29 63 LLLMMFFMMMFLLYLFLLLLTTTTKKAL
59 59 A D - 0 0 83 28 51 DDDDDDDDDDDK.STETTDTDDDDGGSA
60 60 A K S S+ 0 0 161 29 71 KKKKKKKKKKADKAAAAAPAPPPIAAAG
61 61 A A S S+ 0 0 98 29 58 AAAKKKKKKKKKAMKMKKKKKKKNHRAK
62 62 A D S S- 0 0 76 29 54 DDDDDDDDDDDKKPKPKKDKDDDEEEAT
63 63 A K + 0 0 167 29 54 KKKKKKKKKKKGKTGAGGKGKKKTRRKK
64 64 A S S > S- 0 0 42 29 69 SSSSSSSSSSSTGKEKEETETTTKDDKG
65 65 A V T 3 S+ 0 0 83 29 82 VVVAAVVAAAENEgKgKKsKsssgTTeS
66 66 A N T 3 + 0 0 65 28 73 NNNKKHHKKKKSKkSkSSkShhkkMMt.
67 67 A S B X> -b 57 0B 1 28 60 SSSGGSSGGGSLSSLSLLSLSSSPSSS.
68 68 A W T 34 S+ 0 0 39 28 20 WWWYYYYYYYFYLYYYYFFFFFFYLLF.
69 69 A Y T 34 S+ 0 0 98 28 2 YYYYYYYYYYYYYFYFYYYYYYYFFFY.
70 70 A K T <4 S+ 0 0 58 29 80 KKKHHKKHHHKVAKVKVVRVKKRKMMSL
71 71 A V S < S+ 0 0 31 29 54 VVVAAIIVVVIMVAVAVVAVAAAAAAAA
72 72 A V S S+ 0 0 32 29 74 VVVMMIIMMMVHVMHMHHFHFYFMYYFL
73 73 A H S S+ 0 0 63 29 39 HHHHHHHHHHHAHHAHATHTHHHHHHHD
74 74 A D > + 0 0 32 29 73 DDDDDDDDDDGKTYKYKKDKDDDMSSST
75 75 A A T 3 S+ 0 0 36 28 86 AAA.KRRKKKPERKGKGTMTMMMIPPKL
76 76 A K T 3 S- 0 0 183 29 59 KKKKGKKNNNGKTREREGKGKKKKDDKK
77 77 A G < - 0 0 14 29 80 GGGGTAATTTAAENLNLLSLSSSKTTSG
78 78 A G - 0 0 54 28 74 GGGTKTTKK.ADLNKNKKEKEEENDDDA
79 79 A A S S+ 0 0 113 28 89 AAAKFTT.FKAAKAHEHHKHKNKFRRAG
80 80 A K S S- 0 0 94 28 89 KKKFKVVF.FApHkTkTQSQSSSRSSSH
81 81 A P - 0 0 54 18 72 PPPKSAAKKKPqMp.p.......P...G
82 82 A T - 0 0 20 21 49 TTTT.TTSSSSSTSSSST.T...S...N
83 83 A C S > S+ 0 0 63 29 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCC
84 84 A I H > S+ 0 0 37 29 42 IIIVVMMVVVLLLLLVLLMLIIMIYYLL
85 85 A S H > S+ 0 0 15 29 48 SSSGGSSGGGASGGASAEGEGGGAGGAE
86 86 A C H 4 S+ 0 0 47 29 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCC
87 87 A H H >< S+ 0 0 43 29 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHH
88 88 A K H 3X S+ 0 0 96 29 81 KKKLLLLVVVKVSVSISTKTKKKTRRKK
89 89 A D T 3< S+ 0 0 139 29 52 DDDEEEEEEEDKKKKRKKKKKKKRKKKE
90 90 A K T <4 S+ 0 0 145 28 84 KKKATAAVVVTVVEVEVVEVEEE.LLEK
91 91 A A T 4 S- 0 0 34 28 58 AAAAAAAAAAAVVFVFVVAVAAT.AAKA
92 92 A G < - 0 0 42 24 35 GGGGGGGGGGAAAGAGAA A .GGKG
93 93 A D S S+ 0 0 148 24 70 DDDAASSAAAKEENEQEE E .KKAS
94 94 A D >> - 0 0 93 25 64 DDDDDDDDDDNKKDKDKK K EYYGD
95 95 A K H 3> S+ 0 0 160 23 71 KKKAAKKAAAPPP.P.PP P FPPKP
96 96 A E H 3> S+ 0 0 114 23 55 EEEAADDAAAEDE.E.EE E GNNNA
97 97 A L H <4 S+ 0 0 82 23 68 LLLKKLLKKKRLL.L.LL L DFFVL
98 98 A K H X>S+ 0 0 56 23 18 KKKKKKKKKKKKK.K.KK K DKKPK
99 99 A K H <5S+ 0 0 115 23 30 KKKKKKKKKKKKKKKKKK K P VE
100 100 A K T <5S+ 0 0 108 23 54 KKKEEEEDDDVDDEDDDD D D SK
101 101 A L T 45S+ 0 0 40 22 22 LLLLLLLLLLLLLMLMLL L M C
102 102 A T T <5S+ 0 0 26 22 10 TTTTTTTTTTTTTTTTTT T T K
103 103 A G < - 0 0 21 22 8 GGGGGGGGGGGGGGGGGG G G E
104 104 A C S > S+ 0 0 94 22 0 CCCCCCCCCCCCCCCCCC C C C
105 105 A K T 3 S+ 0 0 181 21 71 KKKKKKKKKKAAAIAVAA A A
106 106 A G T 3 S+ 0 0 51 21 66 GGGGGKKKKKGKKNKNKK K T
107 107 A S S < S- 0 0 6 21 0 SSSSSSSSSSSSSSSSSS S S
108 108 A A S S+ 0 0 71 21 59 AAAKKKKKKKAKKAKSKK K A
109 109 A C S S+ 0 0 45 21 0 CCCCCCCCCCCCCCCCCC C C
110 110 A H S S+ 0 0 63 21 0 HHHHHHHHHHHHHHHHHH H H
111 111 A P 0 0 82 18 15 PPPSSPP PPPPPPPP P P
112 112 A S 0 0 165 7 61 SSS S E N
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 73 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.586 19 0.75
2 2 A 0 0 0 0 0 0 0 0 20 13 0 0 0 0 0 0 0 13 13 40 15 0 0 1.494 49 0.36
3 3 A 56 17 0 0 6 0 0 0 22 0 0 0 0 0 0 0 0 0 0 0 18 0 0 1.120 37 0.41
4 4 A 0 0 11 0 0 0 0 0 33 44 11 0 0 0 0 0 0 0 0 0 18 0 0 1.215 40 0.38
5 5 A 0 0 0 0 0 0 0 0 89 0 0 0 0 0 0 0 0 0 11 0 18 0 0 0.349 11 0.77
6 6 A 0 0 11 0 0 0 0 0 11 28 0 0 0 0 0 0 0 0 0 50 18 0 0 1.191 39 0.27
7 7 A 0 6 0 6 0 0 0 33 0 6 0 6 0 0 0 28 6 11 0 0 18 0 0 1.769 59 0.16
8 8 A 0 0 0 0 0 0 0 6 56 0 6 11 0 0 0 11 0 11 0 0 18 0 0 1.380 46 0.37
9 9 A 6 0 17 0 0 0 0 0 0 56 0 0 0 0 0 22 0 0 0 0 18 0 0 1.120 37 0.28
10 10 A 0 0 33 0 0 0 0 0 33 0 6 0 0 0 0 22 0 0 0 6 18 0 0 1.388 46 0.14
11 11 A 11 0 0 0 0 0 0 0 11 0 6 0 0 0 0 6 0 17 0 50 18 0 0 1.455 48 0.36
12 12 A 0 11 6 0 22 0 0 28 0 33 0 0 0 0 0 0 0 0 0 0 18 0 0 1.461 48 0.02
13 13 A 0 45 20 0 0 0 0 0 15 0 0 5 0 0 0 0 0 5 10 0 20 0 0 1.496 49 0.20
14 14 A 0 5 0 0 0 0 0 29 19 0 0 5 0 0 0 29 5 10 0 0 21 0 0 1.691 56 0.20
15 15 A 0 10 0 43 10 0 0 38 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 1.179 39 0.23
16 16 A 0 0 0 0 0 0 0 18 5 5 9 18 0 0 5 9 0 27 0 5 22 0 0 1.972 65 0.25
17 17 A 0 0 0 0 0 0 5 14 32 0 9 0 0 0 0 5 0 23 14 0 22 0 0 1.743 58 0.28
18 18 A 0 4 0 0 0 0 0 4 4 4 12 40 0 0 4 28 0 0 0 0 25 0 0 1.621 54 0.27
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 44 26 0 15 7 27 0 0 1.379 46 0.44
20 20 A 0 22 0 15 0 0 0 0 7 0 7 4 0 0 0 30 15 0 0 0 27 0 0 1.768 59 0.16
21 21 A 0 0 0 0 7 0 0 4 0 41 4 33 0 0 0 0 0 11 0 0 27 0 0 1.413 47 0.26
22 22 A 96 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0.154 5 0.92
23 23 A 48 0 7 21 0 0 0 0 7 0 0 10 0 0 0 7 0 0 0 0 29 0 0 1.465 48 0.40
24 24 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
25 25 A 0 0 0 0 0 0 0 0 0 28 14 0 0 0 0 0 0 0 59 0 29 0 0 0.942 31 0.42
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 29 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 0 21 0 59 0 0 0 0 21 0 0 0 0 29 0 0 0.965 32 0.45
28 28 A 0 0 0 0 0 0 0 14 3 17 24 34 0 0 0 7 0 0 0 0 29 0 0 1.587 52 0.33
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 29 0 0 0.000 0 1.00
30 30 A 3 0 0 0 0 0 0 3 17 0 7 0 0 0 0 41 10 17 0 0 29 0 0 1.623 54 0.29
31 31 A 0 0 0 0 0 0 0 7 10 0 21 3 0 0 0 31 0 0 7 21 29 0 0 1.735 57 0.29
32 32 A 62 3 10 0 0 0 17 3 3 0 0 0 0 0 0 0 0 0 0 0 29 0 2 1.182 39 0.48
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 7 28 0 24 29 0 0 1.248 41 0.48
34 34 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
35 35 A 21 3 3 0 0 0 0 17 14 0 3 0 0 0 10 14 0 0 0 14 29 0 0 2.032 67 0.11
36 36 A 14 0 3 0 0 0 0 0 3 0 0 28 0 0 0 0 0 3 0 48 29 0 0 1.328 44 0.32
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 29 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 29 0 0 0.000 0 1.00
40 40 A 0 10 0 0 0 0 0 3 0 31 0 0 0 0 0 28 10 7 7 3 29 5 20 1.789 59 0.19
41 41 A 0 8 0 0 0 0 0 0 4 17 0 4 0 0 0 8 8 0 29 21 24 0 0 1.871 62 0.17
42 42 A 0 4 4 0 0 0 0 64 0 8 4 0 0 0 0 4 0 0 0 12 25 0 0 1.257 41 0.42
43 43 A 0 3 0 0 0 0 0 17 0 0 3 0 0 0 0 59 0 3 0 14 29 0 0 1.238 41 0.38
44 44 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 24 0 59 3 10 29 0 0 1.123 37 0.54
45 45 A 0 0 0 0 0 0 0 0 14 3 17 0 0 0 7 0 17 7 14 21 29 0 0 1.964 65 0.26
46 46 A 7 7 0 3 10 0 48 7 0 3 0 14 0 0 0 0 0 0 0 0 29 0 2 1.645 54 0.23
47 47 A 0 0 0 0 0 0 0 0 41 7 0 3 0 0 10 7 28 3 0 0 29 0 0 1.556 51 0.32
48 48 A 0 0 0 0 0 0 0 17 0 7 10 0 0 0 0 66 0 0 0 0 29 0 0 0.999 33 0.43
49 49 A 0 0 0 0 0 0 0 0 0 0 0 3 93 0 3 0 0 0 0 0 29 1 0 0.299 9 0.84
50 50 A 0 0 0 0 0 0 0 21 36 0 18 21 0 0 0 0 0 4 0 0 28 0 0 1.455 48 0.43
51 51 A 0 0 0 0 0 0 0 0 0 0 29 54 7 0 0 0 0 4 7 0 28 0 0 1.188 39 0.42
52 52 A 0 0 0 0 0 0 0 0 66 0 7 0 3 0 0 0 0 10 0 14 29 0 0 1.086 36 0.52
53 53 A 0 0 0 0 0 0 0 79 0 0 3 7 0 3 0 0 0 7 0 0 29 0 0 0.785 26 0.66
54 54 A 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 3 0 29 0 0 0.150 5 0.90
55 55 A 0 0 0 0 0 0 0 0 0 3 0 0 0 97 0 0 0 0 0 0 29 0 0 0.150 5 0.93
56 56 A 0 0 3 0 0 0 0 0 0 0 7 3 0 0 0 0 0 0 17 69 29 0 0 0.976 32 0.57
57 57 A 14 0 21 0 0 0 0 3 0 0 28 0 0 0 0 0 0 0 14 21 29 0 0 1.670 55 0.19
58 58 A 0 41 0 17 14 0 3 0 3 0 0 14 0 0 0 7 0 0 0 0 29 1 0 1.631 54 0.37
59 59 A 0 0 0 0 0 0 0 7 4 0 7 14 0 0 0 4 0 4 0 61 28 0 0 1.315 43 0.49
60 60 A 0 0 3 0 0 0 0 3 34 14 0 0 0 0 0 41 0 0 0 3 29 0 0 1.354 45 0.29
61 61 A 0 0 0 7 0 0 0 0 21 0 0 0 0 3 3 62 0 0 3 0 29 0 0 1.155 38 0.42
62 62 A 0 0 0 0 0 0 0 0 3 7 0 3 0 0 0 21 0 10 0 55 29 0 0 1.305 43 0.45
63 63 A 0 0 0 0 0 0 0 17 3 0 0 7 0 0 7 66 0 0 0 0 29 0 0 1.065 35 0.45
64 64 A 0 0 0 0 0 0 0 7 0 0 41 17 0 0 0 14 0 14 0 7 29 0 0 1.584 52 0.31
65 65 A 21 0 0 0 0 0 0 10 17 0 17 7 0 0 0 14 0 10 3 0 29 1 8 1.975 65 0.17
66 66 A 0 0 0 7 0 0 0 0 0 0 18 4 0 14 0 43 0 0 14 0 28 0 0 1.534 51 0.26
67 67 A 0 18 0 0 0 0 0 18 0 4 61 0 0 0 0 0 0 0 0 0 28 0 0 1.037 34 0.40
68 68 A 0 11 0 0 29 14 46 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 1.231 41 0.80
69 69 A 0 0 0 0 18 0 82 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0.469 15 0.98
70 70 A 17 3 0 7 0 0 0 0 3 0 3 0 0 17 7 41 0 0 0 0 29 0 0 1.688 56 0.19
71 71 A 41 0 10 3 0 0 0 0 45 0 0 0 0 0 0 0 0 0 0 0 29 0 0 1.076 35 0.46
72 72 A 21 3 7 28 14 0 10 0 0 0 0 0 0 17 0 0 0 0 0 0 29 0 0 1.793 59 0.25
73 73 A 0 0 0 0 0 0 0 0 10 0 0 7 0 79 0 0 0 0 0 3 29 0 0 0.719 24 0.61
74 74 A 0 0 0 3 0 0 7 3 0 0 10 7 0 0 0 17 0 0 0 52 29 1 0 1.480 49 0.26
75 75 A 0 4 4 14 0 0 0 7 14 11 0 7 0 0 11 25 0 4 0 0 28 0 0 2.115 70 0.13
76 76 A 0 0 0 0 0 0 0 14 0 0 0 3 0 0 7 52 0 7 10 7 29 0 0 1.518 50 0.40
77 77 A 0 14 0 0 0 0 0 21 14 0 17 21 0 0 0 3 0 3 7 0 29 1 0 1.918 64 0.19
78 78 A 0 4 0 0 0 0 0 14 7 0 0 11 0 0 0 25 0 14 11 14 28 1 0 1.967 65 0.26
79 79 A 0 0 0 0 11 0 0 4 29 0 0 7 0 14 7 21 0 4 4 0 28 1 0 1.939 64 0.11
80 80 A 7 0 0 0 11 0 0 0 4 4 25 7 0 7 4 25 7 0 0 0 28 11 3 2.043 68 0.10
81 81 A 0 0 0 6 0 0 0 6 11 44 6 0 0 0 0 22 6 0 0 0 18 1 0 1.581 52 0.28
82 82 A 0 0 0 0 0 0 0 0 0 0 48 48 0 0 0 0 0 0 5 0 21 0 0 0.852 28 0.51
83 83 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
84 84 A 21 34 24 14 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 1.494 49 0.57
85 85 A 0 0 0 0 0 0 0 45 17 0 28 0 0 0 0 0 0 10 0 0 29 0 0 1.253 41 0.52
86 86 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
87 87 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 29 0 0 0.000 0 1.00
88 88 A 17 14 3 0 0 0 0 0 0 0 10 10 0 0 7 38 0 0 0 0 29 0 0 1.714 57 0.18
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 48 0 28 0 17 29 1 0 1.194 39 0.47
90 90 A 32 7 0 0 0 0 0 0 11 0 0 7 0 0 0 18 0 25 0 0 28 0 0 1.635 54 0.16
91 91 A 21 0 0 0 7 0 0 0 64 0 0 4 0 0 0 4 0 0 0 0 28 0 0 1.041 34 0.41
92 92 A 0 0 0 0 0 0 0 67 29 0 0 0 0 0 0 4 0 0 0 0 24 0 0 0.762 25 0.65
93 93 A 0 0 0 0 0 0 0 0 25 0 13 0 0 0 0 13 4 25 4 17 24 0 0 1.776 59 0.30
94 94 A 0 0 0 0 0 0 8 4 0 0 0 0 0 0 0 24 0 4 4 56 25 2 0 1.256 41 0.36
95 95 A 0 0 0 0 4 0 0 0 22 43 0 0 0 0 0 30 0 0 0 0 23 0 0 1.192 39 0.28
96 96 A 0 0 0 0 0 0 0 4 26 0 0 0 0 0 0 0 0 43 13 13 23 0 0 1.380 46 0.45
97 97 A 4 57 0 0 9 0 0 0 0 0 0 0 0 0 4 22 0 0 0 4 23 0 0 1.276 42 0.31
98 98 A 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 91 0 0 0 4 23 0 0 0.356 11 0.81
99 99 A 4 0 0 0 0 0 0 0 0 4 0 0 0 0 0 87 0 4 0 0 23 0 0 0.531 17 0.70
100 100 A 4 0 0 0 0 0 0 0 0 0 4 0 0 0 0 22 0 22 0 48 23 0 0 1.289 43 0.45
101 101 A 0 82 0 14 0 0 0 0 0 0 0 0 5 0 0 0 0 0 0 0 22 0 0 0.576 19 0.78
102 102 A 0 0 0 0 0 0 0 0 0 0 0 95 0 0 0 5 0 0 0 0 22 0 0 0.185 6 0.90
103 103 A 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 0 0 5 0 0 22 0 0 0.185 6 0.92
104 104 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 22 0 0 0.000 0 1.00
105 105 A 5 0 5 0 0 0 0 0 38 0 0 0 0 0 0 52 0 0 0 0 21 0 0 0.996 33 0.28
106 106 A 0 0 0 0 0 0 0 33 0 0 0 5 0 0 0 52 0 0 10 0 21 0 0 1.074 35 0.34
107 107 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
108 108 A 0 0 0 0 0 0 0 0 33 0 5 0 0 0 0 62 0 0 0 0 21 0 0 0.808 26 0.41
109 109 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
110 110 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 21 0 0 0.000 0 1.00
111 111 A 0 0 0 0 0 0 0 0 0 89 11 0 0 0 0 0 0 0 0 0 18 0 0 0.349 11 0.84
112 112 A 0 0 0 0 0 0 0 0 0 0 71 0 0 0 0 0 0 14 14 0 7 0 0 0.796 26 0.39
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 19 60 1 pVn
5 29 60 1 pVn
6 41 59 1 pVd
7 41 59 1 pVn
8 39 59 1 pVn
9 39 59 1 pVn
10 39 59 1 pVn
11 40 61 1 pWd
12 28 61 1 pVd
12 68 102 3 pLKHq
13 40 58 1 lVn
14 20 66 1 nIk
14 43 90 1 gYk
14 58 106 1 kRp
15 24 58 1 lVd
16 48 92 1 gYk
16 63 108 1 kRp
17 24 58 1 lVd
18 23 59 1 kVq
19 64 89 1 sDk
20 29 59 1 kVq
21 64 89 1 sEh
22 64 89 1 sEh
23 64 89 1 sDk
24 26 69 1 kMk
24 32 76 1 gEp
24 51 96 1 gYk
25 40 66 1 eGl
26 40 67 1 eGl
27 15 59 2 gGId
27 23 69 1 kAt
27 48 95 1 ePt
28 33 54 1 aFk
28 41 63 1 gMa
28 47 70 8 vPFAEGQKIe
//