Complet list of 1qld hssp file
Complete list of 1qld.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1QLD
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-07
HEADER XYLANASE 26-AUG-99 1QLD
COMPND MOL_ID: 1; MOLECULE: XYLANASE; CHAIN: A; FRAGMENT: CELLULOSE BINDING D
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; ORGANISM_TAXI
AUTHOR S.RAGHOTHAMA,P.J.SIMPSON,H.J.GILBERT,M.P.WILLIAMSON
DBREF 1QLD A 21 69 UNP P14768 XYNA_PSEFL 180 228
SEQLENGTH 50
NCHAIN 1 chain(s) in 1QLD data set
NALIGN 55
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : XYNA_CELJU 1XYS 1.00 1.00 2 50 180 228 49 0 0 611 P14768 Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) GN=xynA PE=1 SV=2
2 : B3PKS4_CELJU 0.80 0.98 2 50 166 214 49 0 0 638 B3PKS4 Cellulose or protein binding domain OS=Cellvibrio japonicus (strain Ueda107) GN=CJA_0831 PE=4 SV=1
3 : C5HG55_9BACT 0.79 0.94 3 50 669 716 48 0 0 862 C5HG55 Cellulase OS=bacterium enrichment culture clone CelA20 PE=4 SV=1
4 : B3PKK7_CELJU 0.78 0.92 2 50 390 438 49 0 0 585 B3PKK7 Endo-1, 4-beta mannanase, man5B OS=Cellvibrio japonicus (strain Ueda107) GN=man5B PE=4 SV=1
5 : Q840C1_CELJA 0.78 0.92 2 50 366 414 49 0 0 561 Q840C1 Endo-b1,4-mannanase 5B OS=Cellvibrio japonicus GN=man5B PE=4 SV=1
6 : B3PKK5_CELJU 0.76 0.92 1 50 161 210 50 0 0 698 B3PKK5 Cellobiohydrolase, putative, cel6A OS=Cellvibrio japonicus (strain Ueda107) GN=cel6A PE=4 SV=1
7 : I3I952_9GAMM 0.75 0.90 3 50 672 719 48 0 0 865 I3I952 Cellulase OS=Cellvibrio sp. BR GN=O59_002310 PE=4 SV=1
8 : B3PCS3_CELJU 0.74 0.92 1 50 376 425 50 0 0 570 B3PCS3 Endo-1,4-beta glucanase, cel5B OS=Cellvibrio japonicus (strain Ueda107) GN=cel5B PE=4 SV=1
9 : B3PKK9_CELJU 0.74 0.90 1 50 822 871 50 0 0 1017 B3PKK9 Endo-1,4-beta-glucanase/xyloglucanase, putative, gly74A OS=Cellvibrio japonicus (strain Ueda107) GN=gly74A PE=4 SV=1
10 : Q59665_CELJA 0.74 0.92 1 50 376 425 50 0 0 570 Q59665 Endo-1,4-beta-glucanase OS=Cellvibrio japonicus GN=celE PE=4 SV=1
11 : D9J046_PSEFL 0.73 0.92 2 50 180 228 49 0 0 748 D9J046 Cellulase OS=Pseudomonas fluorescens PE=4 SV=1
12 : B3PF23_CELJU 0.71 0.88 3 50 176 223 48 0 0 605 B3PF23 Cellulase, putative, cel5E OS=Cellvibrio japonicus (strain Ueda107) GN=cel5E PE=4 SV=1
13 : D0ESZ3_PSEAI 0.71 0.90 2 50 667 715 49 0 0 960 D0ESZ3 Cellulase OS=Pseudomonas aeruginosa PE=4 SV=1
14 : GUNA_CELJU 0.71 0.90 2 50 667 715 49 0 0 962 P10476 Endoglucanase A OS=Cellvibrio japonicus (strain Ueda107) GN=celA PE=3 SV=2
15 : GUNC_CELJU 0.70 0.92 1 50 178 227 50 0 0 747 P27033 Endoglucanase C OS=Cellvibrio japonicus (strain Ueda107) GN=celC PE=1 SV=2
16 : GUNB_CELJU 0.69 0.86 2 50 177 225 49 0 0 511 P18126 Endoglucanase B OS=Cellvibrio japonicus (strain Ueda107) GN=celB PE=1 SV=1
17 : C5BK63_TERTT 0.68 0.87 4 50 30 76 47 0 0 648 C5BK63 Glycoside hydrolase family 53 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2309 PE=4 SV=1
18 : I3IDD3_9GAMM 0.65 0.86 2 50 384 432 49 0 0 575 I3IDD3 Endo-1, 4-beta mannanase, man5B OS=Cellvibrio sp. BR GN=O59_000089 PE=4 SV=1
19 : B3PIN1_CELJU 0.63 0.77 5 47 616 658 43 0 0 661 B3PIN1 Endo-1,4-beta-xylanase, esterase, xyn11A OS=Cellvibrio japonicus (strain Ueda107) GN=xyn11A PE=4 SV=1
20 : Q6XR86_9BACT 0.63 0.86 2 50 186 234 49 0 0 525 Q6XR86 GnuB OS=uncultured bacterium GN=gnuB PE=4 SV=1
21 : XY11A_CELJA 0.63 0.77 5 47 616 658 43 0 0 661 Q59674 Bifunctional xylanase/xylan deacetylase OS=Cellvibrio japonicus GN=xyn11A PE=1 SV=1
22 : I3I951_9GAMM 0.62 0.87 5 49 162 206 45 0 0 703 I3I951 Cellobiohydrolase, putative, cel6A OS=Cellvibrio sp. BR GN=O59_002309 PE=4 SV=1
23 : I3I9L4_9GAMM 0.62 0.79 3 50 163 210 48 0 0 736 I3I9L4 Endo-1,4-beta glucanase, cel5A OS=Cellvibrio sp. BR GN=O59_002472 PE=4 SV=1
24 : I3IEH3_9GAMM 0.60 0.74 5 47 611 653 43 0 0 656 I3IEH3 Endo-beta-1,4-xylanase OS=Cellvibrio sp. BR GN=O59_000479 PE=4 SV=1
25 : Q59300_9GAMM 0.60 0.74 5 47 611 653 43 0 0 656 Q59300 Endo-beta-1,4-xylanase (Precursor) OS=Cellvibrio mixtus PE=4 SV=1
26 : Q21N11_SACD2 0.56 0.87 2 40 469 507 39 0 0 507 Q21N11 Putative mannan endo-1,4-b-mannosidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=man5O PE=4 SV=1
27 : Q21N17_SACD2 0.55 0.78 2 50 179 227 49 0 0 558 Q21N17 Putative cellulose-binding protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cbm2D PE=4 SV=1
28 : Q21PQ1_SACD2 0.55 0.86 2 50 372 420 49 0 0 561 Q21PQ1 Putative mannan endo-1,4-b-mannosidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=man5N PE=4 SV=1
29 : C5BRL9_TERTT 0.54 0.71 3 50 457 504 48 0 0 952 C5BRL9 Acetylxylan esterase / xylanase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_3603 PE=3 SV=1
30 : C5BJI9_TERTT 0.53 0.77 4 50 173 219 47 0 0 486 C5BJI9 Glycoside hydrolase family 16 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2211 PE=4 SV=1
31 : C5BQL1_TERTT 0.53 0.73 5 49 845 889 45 0 0 1043 C5BQL1 Glycoside hydrolase family 74 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_3347 PE=4 SV=1
32 : B3PG16_CELJU 0.52 0.78 1 50 98 147 50 0 0 830 B3PG16 Endo-1, 4-beta mannanase, man5C OS=Cellvibrio japonicus (strain Ueda107) GN=man5C PE=4 SV=1
33 : C5BLQ7_TERTT 0.52 0.70 5 48 1179 1222 44 0 0 1324 C5BLQ7 Glucose/sorbosone dehydrogenase domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2567 PE=4 SV=1
34 : Q840C0_CELJA2BGO 0.52 0.78 1 50 98 147 50 0 0 830 Q840C0 Endo-b1,4-mannanase 5C OS=Cellvibrio japonicus GN=man5C PE=1 SV=1
35 : C5BIG0_TERTT 0.51 0.76 2 50 476 524 49 0 0 579 C5BIG0 Glycoside hydrolase family 5 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_4344 PE=4 SV=1
36 : C5BQM3_TERTT 0.51 0.71 6 46 179 219 41 0 0 650 C5BQM3 Glycoside hydrolase family 5 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_3361 PE=4 SV=1
37 : C5BM19_TERTT 0.50 0.73 6 48 279 322 44 1 1 486 C5BM19 Carbohydrate esterase, family 3 OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2703 PE=4 SV=1
38 : C5BLA7_TERTT 0.49 0.73 6 49 190 234 45 1 1 629 C5BLA7 Xylanase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2546 PE=3 SV=1
39 : C5BLD5_TERTT 0.48 0.70 4 49 190 235 46 0 0 723 C5BLD5 Glycoside hydrolase family 26 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_0149 PE=4 SV=1
40 : C5BNR9_TERTT 0.48 0.74 4 48 678 723 46 1 1 876 C5BNR9 Glycoside hydrolase family 9 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_0645 PE=4 SV=1
41 : C5BU21_TERTT 0.48 0.64 6 47 644 684 42 1 1 687 C5BU21 Xylanase / acetylxylan esterase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_1678 PE=4 SV=1
42 : Q21HD3_SACD2 0.48 0.68 6 49 195 238 44 0 0 621 Q21HD3 Endoglucanase-like protein OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cel5D PE=4 SV=1
43 : C5BNA8_TERTT 0.47 0.77 4 49 673 719 47 1 1 814 C5BNA8 Glycoside hydrolase family 5 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2894 PE=4 SV=1
44 : C5BSV8_TERTT 0.47 0.67 5 49 33 77 45 0 0 1849 C5BSV8 Gluconolactonase domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_3803 PE=4 SV=1
45 : Q8RR71_9PSED 0.46 0.79 2 40 424 462 39 0 0 462 Q8RR71 Beta-1,4-mannanase OS=Pseudomonas sp. ND137 GN=amnA PE=4 SV=1
46 : A9Q634_TERTT 0.45 0.62 4 50 493 539 47 0 0 1010 A9Q634 Bifunctional beta 1,4-endoglucanase/cellobiohydrolase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=celAB PE=4 SV=1
47 : C5BNA9_TERTT 0.45 0.62 4 50 492 538 47 0 0 1010 C5BNA9 Glycoside hydrolase families 5 and 6 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=celA PE=4 SV=1
48 : C5BNB1_TERTT 0.45 0.65 3 50 127 174 49 2 2 650 C5BNB1 Cellobiohydrolase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_2898 PE=4 SV=1
49 : Q21N18_SACD2 0.45 0.70 4 49 669 715 47 1 1 867 Q21N18 Cellulose 1,4-beta-cellobiosidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cel9B PE=4 SV=1
50 : C5BQQ5_TERTT 0.44 0.73 3 49 189 236 48 1 1 525 C5BQQ5 Cellulase OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_3400 PE=4 SV=1
51 : Q21GI8_SACD2 0.44 0.69 4 50 181 228 48 1 1 619 Q21GI8 Putative xylanase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=xyn10B PE=3 SV=1
52 : Q21F54_SACD2 0.43 0.70 4 49 165 211 47 1 1 725 Q21F54 Putative retaining b-glycosidase OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=cel5I PE=4 SV=1
53 : C5BMU1_TERTT 0.42 0.62 3 50 137 184 48 0 0 699 C5BMU1 Glycoside hydrolase family 5 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_0427 PE=4 SV=1
54 : A4BA69_9GAMM 0.40 0.67 2 49 336 383 48 0 0 514 A4BA69 Putative hydrolase (Putative secreted protein) OS=Reinekea blandensis MED297 GN=MED297_09956 PE=4 SV=1
55 : C5BMU2_TERTT 0.40 0.64 4 50 349 395 47 0 0 894 C5BMU2 Glycoside hydrolase family 11 and family 5 domain protein OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=TERTU_0428 PE=4 SV=1
## ALIGNMENTS 1 - 55
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 20 A M 0 0 246 8 34 I VLV V I I
2 21 A G + 0 0 70 24 53 GS GGT SSSG GGSG G S SGG V VA S T
3 22 A N - 0 0 156 32 40 NGGGGAAGGGGAGGGA G G G SAAG G GG G T T EG
4 23 A Q - 0 0 59 43 54 QQQQQQQQEQGQLLGQQE Q A AQQQE A AL QE E GEEEEQEEEDE
5 24 A Q E -A 14 0A 72 51 71 QQQQQQQQRQQQRRQAQTQMQQQQQTQQVQVQQQQ VM MESVVVMMMMVVM
6 25 A a E -A 13 0A 0 56 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
7 26 A N E -AB 12 45A 34 56 30 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQQNKNNQEDNNSKQKKSNN
8 27 A W E > -A 11 0A 31 56 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
9 28 A Y T 3 S- 0 0 123 56 9 YYYYYYYYYYYYYYYYWYWYWYYWWYYYYYYYYYYYYYYYWYYYHYYYYYYYYWY
10 29 A G T 3 S+ 0 0 50 56 23 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGQQGQGGQGGGGGQSQQGGG
11 30 A T E < S-A 8 0A 81 56 62 TTTTTTTTTTTTTTTTTNTSTTTTTTESTTTNANTTDDEDTEDYSQQQDDDDQTQ
12 31 A L E +A 7 0A 77 56 90 LLLRRLLLRLLRLLLLLRFLFLLRRQIVNLLSLSLTAPIATNPSIGGGAEAAGRG
13 32 A Y E -A 6 0A 67 56 72 YYYYYYYYYYYYYYYTYYYTYYYYYYRYYYYYYYYYplRpYRlWYTTtppppVYM
14 33 A P E -A 5 0A 29 55 29 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAPPAppPp.PpPPYYpppppYPY
15 34 A L B -c 32 0B 26 56 39 LLLLLVLLLLLLLLLLLILLLTMLLMLLLLVVLVVVLLLLPVLMVPPLLLLLPIP
16 35 A b + 0 0 1 56 27 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCICCCCLLCCCCCLCL
17 36 A V S > S+ 0 0 71 56 84 VVVVVVASVSVNVVVNQVQVQTTTTTNNQISQQQAAVAAQCATEQCCSNQNNCTC
18 37 A T T 3 S+ 0 0 113 56 65 TTTTTTVTTTSTTTSNTTTTTTSNNSNNNSGQNQNNNNNNQNQNNNNNNNNNQHQ
19 38 A T T > S+ 0 0 41 56 66 TTTTTTTTTTTTTTTTTTQTQTTTTTQQQQQAQAQQQQQQNQQTTNNTQTQQNVN
20 39 A T T < + 0 0 51 56 68 TTTSSTSTQTTTQQTSEATTTVAAASDATNDANANDNDDDSNDDSTTSNDNDTET
21 40 A N T 3 S- 0 0 157 55 39 NSSNNSSNSNSSSSSNVSSSSSSSSSSSTSSSTSSSSNSNTTSNSSS.SDSSSSS
22 41 A G S < S- 0 0 25 56 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
23 42 A W E +D 32 0B 130 56 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
24 43 A G E -D 31 0B 15 56 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
25 44 A W E +D 30 0B 151 56 7 WWYWWWYWWWYWWWYYWWWYWYYWWWWWWWWWWWYWWWWWWWWWWWWWWWWWWWW
26 45 A E E > +D 29 0B 96 56 2 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQE
27 46 A D T 3 S- 0 0 117 56 9 DNNNNNNNNNNNNNNDNNNNNNNNNNNNNQDNNNNNNNNNNNNNNNNNNNNNNNN
28 47 A Q T 3 S+ 0 0 184 56 50 QQNNNNNNSNNSSSNGNQSGSGNNNNQQSSNQNQNNQNSNNNNNDNNGQQNNNNN
29 48 A R E < S- D 0 26B 168 56 59 RRKQQRRAQARQQQRRQQRKRKRTTQQQASSQAQAAQQQQRQQSQQQQQQQQQTQ
30 49 A S E - D 0 25B 30 56 10 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSQSSSSSSSSSSSSSSSSSSSSDN
31 50 A b E - D 0 24B 1 56 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 51 A I E -cD 15 23B 0 56 4 IIIIIIIIIIIIIIIVIVIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVI
33 52 A A > - 0 0 0 56 42 AASAAASASASASSSASGSASSSTTSGGGGGAGAGGGGGGGGGGSGGGGGGGGGG
34 53 A R H > S+ 0 0 119 56 80 RRARRVARRRPPAAPRTRTTTTFTTPRRATAYIYAARRARTARIQRRRRIRRRRR
35 54 A S H 4>S+ 0 0 61 56 73 SASAASSASASSSSSTSTSASASSSSDTNNNANATEANNNANTNMQQQTNATQLQ
36 55 A T H 45S+ 0 0 43 56 10 TTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTDTDTTTTTTTTTTTTTTTTTTTTT
37 56 A a H <5S- 0 0 0 56 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
38 57 A A T <5S+ 0 0 4 56 66 ASSSSSSSASSSSSSSTANSNTDNNSSENQNASAENEENANNANDEEEENENEEQ
39 58 A A T 5S+ 0 0 69 56 49 AGAAASAGAGAGAAAATASASSASSGNSSNSSNSSASSSSSDSSSSSSSSSSSTS
40 59 A Q S - 0 0 87 54 71 PPPPPPPPPPPPPPPPPPGPGPPGG SSSSWPWPSWSSWSGWST NNNSSPSNPN
42 61 A A T 3 S+ 0 0 84 54 44 ASAAACAAAAASAAAAAATATSDAA GGGGGAGAGGGGGGTGGG GGGGGSGGDG
43 62 A P T 3 S+ 0 0 93 54 63 PPPPPPPPPPPPPPPPPPGPGPPGG NNGNEPNPNDNNGNGDSG GGGNGNNGPG
44 63 A F < + 0 0 45 54 91 FFFWWYFWFWYFYYYYYWGYGFWGG GGGGGYGYGGGGGGGGGG AANGGAGNYS
45 64 A G B S-B 7 0A 10 54 0 GGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGG GGGGGGGGGG
46 65 A I - 0 0 98 54 55 IIIIIIIIIIIIIIIIVIGVGVPGG IVVLVVPVIVIIVIGVIP GGGVVGVGVG
47 66 A V + 0 0 40 53 29 VVVVVVVVEVVVVVVVVEVVVVVVV IIVVVMVMV IVVIVVVR VVVIIVIVEV
48 67 A G + 0 0 55 48 55 GGGGGGGGGGGAGGGSGG G AN GGGTDGGGG TSNS SSG VVVNSVNVDV
49 68 A S 0 0 127 45 56 SGGDDSGGSGGGAAGTDS A GP GGGGEG GG TN SND SSNSTNSSGN
50 69 A G 0 0 152 34 54 GAGSSGGSGSSNAASSSG T G SSNN N NS NNS S N S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 20 A 38 13 38 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 1.255 41 0.65
2 21 A 8 0 0 0 0 0 0 46 4 0 33 8 0 0 0 0 0 0 0 0 24 0 0 1.270 42 0.46
3 22 A 0 0 0 0 0 0 0 63 19 0 3 6 0 0 0 0 0 3 6 0 32 0 0 1.171 39 0.59
4 23 A 0 7 0 0 0 0 0 7 9 0 0 0 0 0 0 0 44 30 0 2 43 0 0 1.402 46 0.45
5 24 A 16 0 0 16 0 0 0 0 2 0 2 4 0 0 6 0 53 2 0 0 51 0 0 1.443 48 0.28
6 25 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
7 26 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 7 7 2 79 2 56 0 0 0.829 27 0.70
8 27 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
9 28 A 0 0 0 0 0 13 86 0 0 0 0 0 0 2 0 0 0 0 0 0 56 0 0 0.464 15 0.91
10 29 A 0 0 0 0 0 0 0 86 0 0 2 0 0 0 0 0 13 0 0 0 56 0 0 0.464 15 0.76
11 30 A 0 0 0 0 0 0 2 0 2 0 5 57 0 0 0 0 9 5 5 14 56 0 0 1.428 47 0.37
12 31 A 2 38 5 0 4 0 0 9 9 4 5 4 0 0 14 0 2 2 4 0 56 0 0 2.082 69 0.10
13 32 A 2 4 0 2 0 2 66 0 0 11 0 9 0 0 5 0 0 0 0 0 56 1 9 1.220 40 0.28
14 33 A 0 0 0 0 0 0 7 0 4 89 0 0 0 0 0 0 0 0 0 0 55 0 0 0.414 13 0.71
15 34 A 14 66 4 5 0 0 0 0 0 9 0 2 0 0 0 0 0 0 0 0 56 0 0 1.115 37 0.60
16 35 A 0 7 2 0 0 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 56 0 0 0.346 11 0.73
17 36 A 27 0 2 0 0 0 0 0 11 0 7 13 9 0 0 0 18 2 13 0 56 0 0 1.968 65 0.15
18 37 A 2 0 0 0 0 0 0 2 0 0 9 34 0 2 0 0 11 0 41 0 56 0 0 1.403 46 0.34
19 38 A 2 0 0 0 0 0 0 0 4 0 0 52 0 0 0 0 34 0 9 0 56 0 0 1.114 37 0.33
20 39 A 2 0 0 0 0 0 0 0 13 0 14 32 0 0 0 0 5 4 13 18 56 1 0 1.818 60 0.31
21 40 A 2 0 0 0 0 0 0 0 0 0 71 7 0 0 0 0 0 0 18 2 55 0 0 0.890 29 0.61
22 41 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
23 42 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
24 43 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
25 44 A 0 0 0 0 0 84 16 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.441 14 0.93
26 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 56 0 0 0.090 2 0.98
27 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 91 7 56 0 0 0.346 11 0.90
28 47 A 0 0 0 0 0 0 0 7 0 0 16 0 0 0 0 0 20 0 55 2 56 0 0 1.201 40 0.50
29 48 A 0 0 0 0 0 0 0 0 11 0 5 5 0 0 21 5 52 0 0 0 56 0 0 1.381 46 0.40
30 49 A 0 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 2 0 2 2 56 0 0 0.268 8 0.89
31 50 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
32 51 A 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 56 0 0 0.257 8 0.96
33 52 A 0 0 0 0 0 0 0 48 23 0 25 4 0 0 0 0 0 0 0 0 56 0 0 1.156 38 0.57
34 53 A 2 0 5 0 2 0 4 0 18 7 0 16 0 0 45 0 2 0 0 0 56 0 0 1.641 54 0.20
35 54 A 0 2 0 2 0 0 0 0 21 0 32 13 0 0 0 0 9 2 18 2 56 0 0 1.766 58 0.27
36 55 A 0 0 0 0 0 0 0 0 0 0 2 95 0 0 0 0 0 0 0 4 56 0 0 0.243 8 0.90
37 56 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 56 0 0 0.000 0 1.00
38 57 A 0 0 0 0 0 0 0 0 14 0 32 4 0 0 0 0 4 20 23 4 56 0 0 1.659 55 0.34
39 58 A 0 0 0 0 0 0 0 9 29 0 52 4 0 0 0 0 0 0 5 2 56 0 0 1.262 42 0.51
40 59 A 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 0 0 56 0 0 0.257 8 0.83
41 60 A 0 0 0 0 0 9 0 9 0 48 22 2 0 0 0 0 0 0 9 0 54 0 0 1.421 47 0.29
42 61 A 0 0 0 0 0 0 0 43 39 0 7 6 2 0 0 0 0 0 0 4 54 0 0 1.280 42 0.55
43 62 A 0 0 0 0 0 0 0 26 0 46 2 0 0 0 0 0 0 2 20 4 54 0 0 1.300 43 0.37
44 63 A 0 0 0 0 15 11 20 43 6 0 2 0 0 0 0 0 0 0 4 0 54 0 0 1.571 52 0.09
45 64 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 54 0 0 0.000 0 1.00
46 65 A 28 2 44 0 0 0 0 20 0 6 0 0 0 0 0 0 0 0 0 0 54 0 0 1.275 42 0.44
47 66 A 75 0 13 4 0 0 0 0 0 0 0 0 0 0 2 0 0 6 0 0 53 0 0 0.841 28 0.71
48 67 A 13 0 0 0 0 0 0 54 4 0 13 4 0 0 0 0 0 0 8 4 48 0 0 1.456 48 0.44
49 68 A 0 0 0 0 0 0 0 38 7 2 24 7 0 0 0 0 0 2 11 9 45 0 0 1.702 56 0.44
50 69 A 0 0 0 0 0 0 0 24 9 0 41 3 0 0 0 0 0 0 24 0 34 0 0 1.364 45 0.45
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
37 9 287 1 pRp
38 9 198 1 lRp
40 11 688 1 pRp
43 11 683 1 lRp
48 12 138 1 tYp
49 11 679 1 pRp
50 12 200 1 pRp
51 11 191 1 pRp
52 11 175 1 pRp
//