Complet list of 1ps2 hssp file
Complete list of 1ps2.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1PS2
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-05
HEADER GROWTH FACTOR 07-JAN-97 1PS2
COMPND MOL_ID: 1; MOLECULE: PS2; CHAIN: A; SYNONYM: PNR-2; ENGINEERED: YES; M
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR M.A.WILLIAMS,V.I.POLSHAKOV,A.R.GARGARO,J.FEENEY
DBREF 1PS2 A 1 60 UNP P04155 TFF1_HUMAN 25 84
SEQLENGTH 60
NCHAIN 1 chain(s) in 1PS2 data set
NALIGN 148
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : H2QL27_PANTR 0.98 0.98 1 60 25 84 60 0 0 84 H2QL27 Uncharacterized protein OS=Pan troglodytes GN=TFF1 PE=4 SV=1
2 : TFF1_HUMAN 0.98 0.98 1 60 25 84 60 0 0 84 P04155 Trefoil factor 1 OS=Homo sapiens GN=TFF1 PE=1 SV=1
3 : G3RFG4_GORGO 0.97 0.98 1 60 25 84 60 0 0 84 G3RFG4 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101141526 PE=4 SV=1
4 : H2P388_PONAB 0.93 0.95 1 60 25 84 60 0 0 84 H2P388 Uncharacterized protein OS=Pongo abelii GN=TFF1 PE=4 SV=2
5 : G1RWS3_NOMLE 0.92 0.97 1 60 46 105 60 0 0 105 G1RWS3 Uncharacterized protein OS=Nomascus leucogenys GN=TFF1 PE=4 SV=2
6 : Q1KNE4_MACFA 0.82 0.95 1 60 8 67 60 0 0 67 Q1KNE4 Trefoil factor 1 (Fragment) OS=Macaca fascicularis GN=TFF1 PE=2 SV=1
7 : F7FJ17_MACMU 0.78 0.95 1 60 25 84 60 0 0 84 F7FJ17 Uncharacterized protein OS=Macaca mulatta GN=TFF1 PE=4 SV=1
8 : G7MMJ9_MACMU 0.78 0.96 1 55 25 79 55 0 0 79 G7MMJ9 Protein pS2 (Fragment) OS=Macaca mulatta GN=EGK_13213 PE=4 SV=1
9 : G7P074_MACFA 0.78 0.96 1 55 25 79 55 0 0 79 G7P074 Protein pS2 (Fragment) OS=Macaca fascicularis GN=EGM_12146 PE=4 SV=1
10 : F6YDB5_CALJA 0.75 0.95 1 60 25 84 60 0 0 84 F6YDB5 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=TFF1 PE=4 SV=1
11 : A9Q6H1_CANFA 0.70 0.88 1 60 22 81 60 0 0 81 A9Q6H1 Trefoil factor family peptide 1 OS=Canis familiaris PE=4 SV=1
12 : TFF1_CANFA 0.70 0.88 1 60 22 81 60 0 0 81 Q863T4 Trefoil factor 1 OS=Canis familiaris GN=TFF1 PE=3 SV=1
13 : B4X8D7_FELCA 0.67 0.80 1 60 22 81 60 0 0 81 B4X8D7 Trefoil factor family peptide 1 OS=Felis catus GN=TFF1 PE=4 SV=1
14 : B4X8E0_FELCA 0.67 0.80 1 60 22 81 60 0 0 81 B4X8E0 Trefoil factor family peptide 1 OS=Felis catus GN=TFF1 PE=4 SV=1
15 : L9JRQ6_TUPCH 0.66 0.80 1 56 22 77 56 0 0 114 L9JRQ6 Trefoil factor 1 OS=Tupaia chinensis GN=TREES_T100017902 PE=4 SV=1
16 : Q149Y8_MOUSE 0.65 0.80 1 60 28 87 60 0 0 87 Q149Y8 Trefoil factor 1 OS=Mus musculus GN=Tff1 PE=4 SV=1
17 : TFF1_MOUSE 0.65 0.80 1 60 28 87 60 0 0 87 Q08423 Trefoil factor 1 OS=Mus musculus GN=Tff1 PE=2 SV=1
18 : TFF1_RAT 0.65 0.75 1 60 22 81 60 0 0 81 Q63467 Trefoil factor 1 OS=Rattus norvegicus GN=Tff1 PE=3 SV=1
19 : G1NSK1_MYOLU 0.64 0.77 1 60 25 85 61 1 1 85 G1NSK1 Uncharacterized protein OS=Myotis lucifugus GN=TFF1 PE=4 SV=1
20 : H0XSV1_OTOGA 0.64 0.82 1 56 25 80 56 0 0 88 H0XSV1 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=TFF1 PE=4 SV=1
21 : D2HJJ4_AILME 0.63 0.78 5 55 7 57 51 0 0 57 D2HJJ4 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_011479 PE=4 SV=1
22 : F6Q3P2_HORSE 0.63 0.87 1 60 24 83 60 0 0 83 F6Q3P2 Uncharacterized protein (Fragment) OS=Equus caballus GN=TFF1 PE=4 SV=1
23 : G1L5G0_AILME 0.63 0.78 5 55 35 85 51 0 0 85 G1L5G0 Uncharacterized protein OS=Ailuropoda melanoleuca GN=TFF1 PE=4 SV=1
24 : L5MG61_MYODS 0.62 0.74 1 58 25 82 58 0 0 88 L5MG61 Trefoil factor 1 OS=Myotis davidii GN=MDA_GLEAN10011740 PE=4 SV=1
25 : G1SZM9_RABIT 0.60 0.80 1 60 22 81 60 0 0 81 G1SZM9 Uncharacterized protein OS=Oryctolagus cuniculus GN=TFF1 PE=4 SV=2
26 : G5B2T6_HETGA 0.59 0.85 1 46 24 69 46 0 0 69 G5B2T6 Trefoil factor 1 (Fragment) OS=Heterocephalus glaber GN=GW7_21333 PE=4 SV=1
27 : L9JVH5_TUPCH 0.58 0.71 11 58 36 81 48 1 2 147 L9JVH5 Trefoil factor 2 OS=Tupaia chinensis GN=TREES_T100017903 PE=4 SV=1
28 : M3YCR9_MUSPF 0.58 0.80 1 60 114 173 60 0 0 173 M3YCR9 Uncharacterized protein OS=Mustela putorius furo GN=TFF1 PE=4 SV=1
29 : I3LJD4_PIG 0.57 0.74 1 47 23 69 47 0 0 69 I3LJD4 Uncharacterized protein (Fragment) OS=Sus scrofa GN=TFF1 PE=4 SV=1
30 : Q0VTR3_PIG 0.57 0.74 1 47 23 69 47 0 0 69 Q0VTR3 Trefoil factor 1 (Fragment) OS=Sus scrofa GN=TFF1 PE=2 SV=1
31 : W5PM21_SHEEP 0.57 0.76 1 51 24 74 51 0 0 75 W5PM21 Uncharacterized protein (Fragment) OS=Ovis aries GN=TFF1 PE=4 SV=1
32 : G3N3Q9_BOVIN 0.56 0.75 1 59 25 80 59 1 3 81 G3N3Q9 Uncharacterized protein OS=Bos taurus GN=TFF1 PE=4 SV=1
33 : G3TMN8_LOXAF 0.55 0.75 1 59 22 81 60 1 1 82 G3TMN8 Uncharacterized protein OS=Loxodonta africana GN=TFF1 PE=4 SV=1
34 : S9YQE3_9CETA 0.55 0.76 5 54 176 226 51 1 1 286 S9YQE3 Uncharacterized protein OS=Camelus ferus GN=CB1_000325003 PE=4 SV=1
35 : F7F8F0_CALJA 0.54 0.71 11 58 36 81 48 1 2 129 F7F8F0 Uncharacterized protein OS=Callithrix jacchus GN=TFF2 PE=4 SV=1
36 : G7P075_MACFA 0.54 0.67 11 58 36 81 48 1 2 125 G7P075 Spasmolytic polypeptide (Fragment) OS=Macaca fascicularis GN=EGM_12147 PE=4 SV=1
37 : H0XBC9_OTOGA 0.54 0.67 11 58 36 81 48 1 2 129 H0XBC9 Uncharacterized protein OS=Otolemur garnettii GN=TFF2 PE=4 SV=1
38 : L5MF58_MYODS 0.54 0.64 9 58 1 48 50 1 2 144 L5MF58 Trefoil factor 2 OS=Myotis davidii GN=MDA_GLEAN10011739 PE=4 SV=1
39 : M3WHF2_FELCA 0.54 0.69 11 58 36 81 48 1 2 125 M3WHF2 Uncharacterized protein OS=Felis catus GN=TFF2 PE=4 SV=1
40 : G3U055_LOXAF 0.53 0.72 1 59 29 88 60 1 1 89 G3U055 Uncharacterized protein OS=Loxodonta africana GN=TFF1 PE=4 SV=1
41 : G1L5H5_AILME 0.52 0.70 7 52 32 76 46 1 1 76 G1L5H5 Uncharacterized protein OS=Ailuropoda melanoleuca GN=TFF3 PE=4 SV=1
42 : G5B2T8_HETGA 0.52 0.67 7 60 40 88 54 1 5 88 G5B2T8 Trefoil factor 3 OS=Heterocephalus glaber GN=GW7_21335 PE=4 SV=1
43 : G7MMK0_MACMU 0.52 0.67 11 58 36 81 48 1 2 125 G7MMK0 Spasmolytic polypeptide (Fragment) OS=Macaca mulatta GN=EGK_13214 PE=4 SV=1
44 : V9LKZ6_MUSSP 0.52 0.69 11 58 21 66 48 1 2 98 V9LKZ6 Trefoil factor 2 (Fragment) OS=Mus spretus GN=Tff2 PE=2 SV=1
45 : D2HJJ6_AILME 0.50 0.70 2 51 2 50 50 1 1 52 D2HJJ6 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_011481 PE=4 SV=1
46 : F6QZB8_MONDO 0.50 0.61 5 60 25 76 56 1 4 76 F6QZB8 Uncharacterized protein OS=Monodelphis domestica GN=TFF1 PE=4 SV=2
47 : F6VM99_ORNAN 0.50 0.68 7 56 32 76 50 1 5 80 F6VM99 Uncharacterized protein OS=Ornithorhynchus anatinus GN=TFF3 PE=4 SV=1
48 : G5E5Q6_BOVIN 0.50 0.70 7 60 33 81 54 1 5 81 G5E5Q6 Trefoil factor 3 OS=Bos taurus GN=TFF3 PE=4 SV=1
49 : H0W771_CAVPO 0.50 0.75 1 60 25 84 60 0 0 84 H0W771 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=TFF1 PE=4 SV=1
50 : I3LKR2_PIG 0.50 0.69 7 60 32 80 54 1 5 80 I3LKR2 Trefoil factor 3 OS=Sus scrofa GN=TFF3 PE=4 SV=1
51 : TFF3_BOVIN 0.50 0.70 7 60 33 81 54 1 5 81 A8YXX7 Trefoil factor 3 OS=Bos taurus GN=TFF3 PE=3 SV=1
52 : TFF3_PIG 0.50 0.69 7 60 32 80 54 1 5 80 Q29183 Trefoil factor 3 OS=Sus scrofa GN=TFF3 PE=3 SV=1
53 : W5PLW3_SHEEP 0.50 0.69 7 60 33 81 54 1 5 81 W5PLW3 Uncharacterized protein OS=Ovis aries GN=TFF3 PE=4 SV=1
54 : XP1_XENLA 0.49 0.73 5 55 30 77 51 1 3 78 Q00222 Putative gastrointestinal growth factor xP1 OS=Xenopus laevis GN=p1 PE=2 SV=1
55 : D2HJJ5_AILME 0.48 0.64 9 58 9 56 50 1 2 100 D2HJJ5 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_011480 PE=4 SV=1
56 : F7DVQ8_HORSE 0.48 0.67 7 60 32 80 54 1 5 80 F7DVQ8 Uncharacterized protein OS=Equus caballus GN=TFF3 PE=4 SV=1
57 : F7EKB1_MACMU 0.48 0.69 7 60 31 80 54 1 4 80 F7EKB1 Uncharacterized protein OS=Macaca mulatta GN=TFF3 PE=4 SV=1
58 : G1RWR5_NOMLE 0.48 0.69 7 60 82 130 54 1 5 130 G1RWR5 Uncharacterized protein OS=Nomascus leucogenys GN=TFF3 PE=4 SV=1
59 : G3RFF2_GORGO 0.48 0.67 7 60 82 130 54 1 5 130 G3RFF2 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101140656 PE=4 SV=1
60 : H0XBC7_OTOGA 0.48 0.67 7 60 32 80 54 1 5 80 H0XBC7 Uncharacterized protein OS=Otolemur garnettii GN=TFF3 PE=4 SV=1
61 : H2P3J7_PONAB 0.48 0.67 7 60 81 129 54 1 5 129 H2P3J7 Uncharacterized protein (Fragment) OS=Pongo abelii GN=LOC100436154 PE=4 SV=1
62 : H2QL25_PANTR 0.48 0.67 7 60 82 130 54 1 5 130 H2QL25 Uncharacterized protein OS=Pan troglodytes GN=TFF3 PE=4 SV=1
63 : H2XW68_CIOIN 0.48 0.69 10 56 26 73 48 1 1 624 H2XW68 Uncharacterized protein OS=Ciona intestinalis GN=LOC100187546 PE=3 SV=1
64 : TFF3_HUMAN 0.48 0.67 7 60 32 80 54 1 5 80 Q07654 Trefoil factor 3 OS=Homo sapiens GN=TFF3 PE=1 SV=1
65 : M7B0T9_CHEMY 0.47 0.60 7 59 32 82 53 1 2 127 M7B0T9 Trefoil factor 2 (Fragment) OS=Chelonia mydas GN=UY3_11390 PE=4 SV=1
66 : A9Q6H6_CANFA 0.46 0.69 7 60 32 80 54 1 5 80 A9Q6H6 Trefoil factor family peptide 3 OS=Canis familiaris PE=4 SV=1
67 : A9Q7D0_CANLU 0.46 0.69 7 60 31 79 54 1 5 79 A9Q7D0 Trefoil factor family peptide 3 (Fragment) OS=Canis lupus GN=TFF3 PE=2 SV=1
68 : F1PPU5_CANFA 0.46 0.70 7 60 32 80 54 1 5 80 F1PPU5 Trefoil factor 3 OS=Canis familiaris GN=TFF3 PE=4 SV=1
69 : G1NSK0_MYOLU 0.46 0.67 7 60 32 80 54 1 5 80 G1NSK0 Uncharacterized protein OS=Myotis lucifugus GN=TFF3 PE=4 SV=1
70 : G3T9W2_LOXAF 0.46 0.69 2 60 28 81 59 1 5 81 G3T9W2 Uncharacterized protein OS=Loxodonta africana GN=TFF3 PE=4 SV=1
71 : G3WP26_SARHA 0.46 0.65 7 60 54 102 54 1 5 102 G3WP26 Uncharacterized protein OS=Sarcophilus harrisii GN=TFF3 PE=4 SV=1
72 : H0W2H4_CAVPO 0.46 0.67 7 60 32 80 54 1 5 80 H0W2H4 Uncharacterized protein OS=Cavia porcellus GN=TFF3 PE=4 SV=1
73 : N0D420_CHICK 0.46 0.58 7 58 80 127 52 1 4 127 N0D420 Trefoil factor 2 OS=Gallus gallus PE=2 SV=1
74 : Q5KR09_XENLA 0.46 0.65 7 60 29 77 54 1 5 77 Q5KR09 P-domain peptide OS=Xenopus laevis GN=tff1 PE=4 SV=1
75 : TFF3_CANFA 0.46 0.69 7 60 32 80 54 1 5 80 Q863B4 Trefoil factor 3 OS=Canis familiaris GN=TFF3 PE=3 SV=1
76 : TFF3_MOUSE 0.46 0.63 7 60 33 81 54 1 5 81 Q62395 Trefoil factor 3 OS=Mus musculus GN=Tff3 PE=1 SV=2
77 : TFF3_RAT 0.46 0.61 7 60 33 81 54 1 5 81 Q03191 Trefoil factor 3 OS=Rattus norvegicus GN=Tff3 PE=1 SV=1
78 : C3Y1U4_BRAFL 0.45 0.62 5 51 5 51 47 0 0 51 C3Y1U4 Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_219506 PE=4 SV=1
79 : E2RMI5_CANFA 0.45 0.67 12 60 38 81 49 1 5 81 E2RMI5 Trefoil factor 3 OS=Canis familiaris GN=TFF3 PE=4 SV=1
80 : R7VNS8_COLLI 0.45 0.64 7 59 5 55 53 1 2 99 R7VNS8 Trefoil factor 2 (Fragment) OS=Columba livia GN=A306_14132 PE=4 SV=1
81 : F7ADS3_CALJA 0.44 0.67 7 60 32 80 54 1 5 80 F7ADS3 Uncharacterized protein OS=Callithrix jacchus GN=TFF3 PE=4 SV=1
82 : H2P386_PONAB 0.44 0.65 7 60 82 129 54 2 6 129 H2P386 Uncharacterized protein (Fragment) OS=Pongo abelii GN=TFF3 PE=4 SV=1
83 : K7FDW2_PELSI 0.44 0.54 7 58 32 81 52 1 2 128 K7FDW2 Uncharacterized protein OS=Pelodiscus sinensis GN=TFF2 PE=4 SV=1
84 : L5KAC8_PTEAL 0.44 0.65 7 60 32 80 54 1 5 80 L5KAC8 Trefoil factor 3 OS=Pteropus alecto GN=PAL_GLEAN10008370 PE=4 SV=1
85 : XP2_XENLA 0.44 0.63 2 60 346 400 59 1 4 439 P17437 Skin secretory protein xP2 OS=Xenopus laevis GN=p2 PE=1 SV=2
86 : B7ZQR4_XENLA 0.43 0.65 11 59 80 126 49 1 2 224 B7ZQR4 P-domain peptide OS=Xenopus laevis GN=tff2 PE=2 SV=1
87 : F7AZ82_XENTR 0.43 0.65 11 59 80 126 49 1 2 224 F7AZ82 Uncharacterized protein OS=Xenopus tropicalis GN=tff2 PE=4 SV=1
88 : G5B2T7_HETGA 0.43 0.76 1 51 84 134 51 0 0 188 G5B2T7 Trefoil factor 2 OS=Heterocephalus glaber GN=GW7_21334 PE=4 SV=1
89 : H2YIM0_CIOSA 0.43 0.55 16 60 68 111 47 3 5 232 H2YIM0 Uncharacterized protein OS=Ciona savignyi GN=Csa.7911 PE=4 SV=1
90 : I3LWZ5_SPETR 0.43 0.59 7 60 32 80 54 1 5 80 I3LWZ5 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=TFF2 PE=4 SV=1
91 : I3N540_SPETR 0.43 0.60 1 60 72 126 60 1 5 126 I3N540 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=TFF2 PE=4 SV=1
92 : M3YCP0_MUSPF 0.43 0.70 7 60 32 80 54 1 5 80 M3YCP0 Uncharacterized protein OS=Mustela putorius furo GN=TFF3 PE=4 SV=1
93 : S7NSA1_MYOBR 0.43 0.73 7 57 32 81 51 1 1 110 S7NSA1 Trefoil factor 3 OS=Myotis brandtii GN=D623_10016540 PE=4 SV=1
94 : TFF3_FELCA 0.43 0.67 7 60 32 80 54 1 5 80 B4X8D9 Trefoil factor 3 OS=Felis catus GN=TFF3 PE=3 SV=1
95 : U6DXX6_NEOVI 0.43 0.70 7 60 34 82 54 1 5 82 U6DXX6 Trefoil factor 3 (Intestinal) (Fragment) OS=Neovison vison GN=E9PBB5 PE=2 SV=1
96 : XP4_XENLA 0.43 0.65 11 59 80 126 49 1 2 224 Q00223 Putative gastrointestinal growth factor xP4 OS=Xenopus laevis GN=p4 PE=2 SV=1
97 : C3XPD0_BRAFL 0.42 0.65 1 46 821 868 48 2 2 882 C3XPD0 Uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_85333 PE=4 SV=1
98 : E1BZ37_CHICK 0.42 0.64 7 59 31 81 53 1 2 128 E1BZ37 Uncharacterized protein OS=Gallus gallus GN=TFF2 PE=4 SV=1
99 : F7DPS8_XENTR 0.42 0.65 2 58 76 132 57 0 0 231 F7DPS8 Uncharacterized protein OS=Xenopus tropicalis GN=tff1 PE=4 SV=1
100 : G1NP11_MELGA 0.42 0.66 7 59 31 81 53 1 2 128 G1NP11 Uncharacterized protein OS=Meleagris gallopavo GN=TFF2 PE=4 SV=1
101 : G9KT27_MUSPF 0.42 0.71 7 58 30 76 52 1 5 77 G9KT27 Trefoil factor 3 (Fragment) OS=Mustela putorius furo PE=2 SV=1
102 : H0Z589_TAEGU 0.42 0.64 7 59 5 55 53 1 2 99 H0Z589 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=TFF2 PE=4 SV=1
103 : H0ZXJ8_TAEGU 0.42 0.64 7 59 3 53 53 1 2 100 H0ZXJ8 Uncharacterized protein (Fragment) OS=Taeniopygia guttata PE=4 SV=1
104 : R0KKH6_ANAPL 0.42 0.66 7 59 5 55 53 1 2 99 R0KKH6 Trefoil factor 2 (Fragment) OS=Anas platyrhynchos GN=Anapl_14757 PE=4 SV=1
105 : S7QF82_MYOBR 0.42 0.67 3 57 58 112 55 0 0 114 S7QF82 Trefoil factor 2 OS=Myotis brandtii GN=D623_10016541 PE=4 SV=1
106 : U3IMN1_ANAPL 0.42 0.66 7 59 29 79 53 1 2 126 U3IMN1 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=TFF2 PE=4 SV=1
107 : U3JH78_FICAL 0.42 0.64 7 59 32 82 53 1 2 128 U3JH78 Uncharacterized protein OS=Ficedula albicollis GN=TFF2 PE=4 SV=1
108 : W5M242_LEPOC 0.42 0.62 7 59 593 639 53 1 6 683 W5M242 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
109 : A8WH27_XENTR 0.41 0.59 5 58 19 67 54 1 5 67 A8WH27 LOC100127757 protein (Fragment) OS=Xenopus tropicalis GN=LOC100127757 PE=2 SV=1
110 : I3NDI4_SPETR 0.41 0.61 7 60 2 53 54 1 2 101 I3NDI4 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=TFF2 PE=4 SV=1
111 : M3WQN7_FELCA 0.41 0.65 7 60 32 80 54 1 5 80 M3WQN7 Trefoil factor 3 OS=Felis catus GN=TFF3 PE=4 SV=1
112 : MUA1_XENLA 0.41 0.59 2 59 18 75 58 0 0 400 P10667 Integumentary mucin A.1 OS=Xenopus laevis PE=1 SV=1
113 : H2YIM1_CIOSA 0.40 0.52 11 60 572 620 52 3 5 741 H2YIM1 Uncharacterized protein OS=Ciona savignyi GN=Csa.7911 PE=4 SV=1
114 : I3LMK2_PIG 0.40 0.66 3 60 79 131 58 1 5 131 I3LMK2 Trefoil factor 2 OS=Sus scrofa GN=TFF2 PE=4 SV=1
115 : L9JS54_TUPCH 0.40 0.64 7 60 32 86 55 1 1 115 L9JS54 Trefoil factor 3 OS=Tupaia chinensis GN=TREES_T100017904 PE=4 SV=1
116 : O15999_CIOSA 0.40 0.52 11 60 572 620 52 3 5 741 O15999 CsEpi-1 OS=Ciona savignyi PE=2 SV=1
117 : TFF2_PIG 0.40 0.66 3 60 75 127 58 1 5 127 P01359 Trefoil factor 2 (Fragment) OS=Sus scrofa GN=TFF2 PE=1 SV=4
118 : V8NRN5_OPHHA 0.40 0.62 5 59 31 82 55 1 3 121 V8NRN5 Trefoil factor 2 (Fragment) OS=Ophiophagus hannah GN=Tff2 PE=4 SV=1
119 : B7ZQT1_XENLA 0.39 0.65 11 59 80 126 49 1 2 224 B7ZQT1 p4.2 trefoil factor OS=Xenopus laevis GN=tff-A PE=2 SV=1
120 : B7ZQT3_XENLA 0.39 0.65 11 59 80 126 49 1 2 224 B7ZQT3 p4.2 trefoil factor OS=Xenopus laevis GN=tff-A PE=2 SV=1
121 : F6QFL6_XENTR 0.39 0.57 5 58 19 67 54 1 5 67 F6QFL6 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=tff1 PE=4 SV=1
122 : H2YP71_CIOSA 0.39 0.66 2 57 17 69 56 2 3 253 H2YP71 Uncharacterized protein OS=Ciona savignyi GN=Csa.6299 PE=4 SV=1
123 : K7GH60_PELSI 0.39 0.66 5 60 30 81 56 1 4 81 K7GH60 Uncharacterized protein OS=Pelodiscus sinensis GN=TFF3 PE=4 SV=1
124 : L5K9X0_PTEAL 0.39 0.69 1 51 77 127 51 0 0 183 L5K9X0 Trefoil factor 2 OS=Pteropus alecto GN=PAL_GLEAN10008369 PE=4 SV=1
125 : Q9PT64_XENLA 0.39 0.65 11 59 80 126 49 1 2 224 Q9PT64 Trefoil factor OS=Xenopus laevis GN=xP4.2 PE=2 SV=1
126 : A9Q6H4_CANFA 0.38 0.67 1 60 72 126 60 1 5 126 A9Q6H4 Trefoil factor family peptide 2 (Fragment) OS=Canis familiaris PE=2 SV=1
127 : A9UML2_XENTR 0.38 0.64 4 58 164 214 55 1 4 314 A9UML2 LOC100135388 protein OS=Xenopus tropicalis GN=LOC100135388 PE=2 SV=1
128 : B1H2Z4_XENTR 0.38 0.64 4 58 150 200 55 1 4 300 B1H2Z4 LOC100145517 protein OS=Xenopus tropicalis GN=LOC100145517 PE=2 SV=1
129 : F1PPU3_CANFA 0.38 0.67 1 60 97 151 60 1 5 151 F1PPU3 Trefoil factor 2 OS=Canis familiaris GN=TFF2 PE=4 SV=2
130 : G1L5H4_AILME 0.38 0.60 1 60 75 129 60 1 5 129 G1L5H4 Uncharacterized protein OS=Ailuropoda melanoleuca GN=TFF2 PE=4 SV=1
131 : G1PQG9_MYOLU 0.38 0.64 3 60 77 129 58 1 5 129 G1PQG9 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=TFF2 PE=4 SV=1
132 : G3TN48_LOXAF 0.38 0.67 3 60 77 129 58 1 5 129 G3TN48 Uncharacterized protein OS=Loxodonta africana GN=TFF2 PE=4 SV=1
133 : G3WPR8_SARHA 0.38 0.62 1 60 75 129 60 1 5 129 G3WPR8 Uncharacterized protein OS=Sarcophilus harrisii GN=TFF2 PE=4 SV=1
134 : MUC1_XENLA 0.38 0.56 4 58 523 573 55 1 4 662 Q05049 Integumentary mucin C.1 (Fragment) OS=Xenopus laevis PE=2 SV=1
135 : TFF2_CANFA 0.38 0.67 1 60 75 129 60 1 5 129 Q863J2 Trefoil factor 2 OS=Canis familiaris GN=TFF2 PE=2 SV=1
136 : C3YZG4_BRAFL 0.37 0.59 5 58 4 51 54 1 6 52 C3YZG4 Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_204571 PE=4 SV=1
137 : F6QHI0_HORSE 0.37 0.63 1 60 75 129 60 1 5 129 F6QHI0 Uncharacterized protein OS=Equus caballus GN=TFF2 PE=4 SV=1
138 : L8HWM2_9CETA 0.37 0.71 1 51 75 125 51 0 0 125 L8HWM2 Trefoil factor 2 (Fragment) OS=Bos mutus GN=M91_12125 PE=4 SV=1
139 : W5MEA6_LEPOC 0.36 0.47 1 59 48 100 59 2 6 410 W5MEA6 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
140 : B4X8D8_FELCA 0.35 0.62 1 60 75 129 60 1 5 129 B4X8D8 Trefoil factor family peptide 2 OS=Felis catus GN=TFF2 PE=2 SV=1
141 : F6QZC5_MONDO 0.35 0.55 1 60 75 129 60 1 5 129 F6QZC5 Uncharacterized protein OS=Monodelphis domestica GN=TFF2 PE=4 SV=2
142 : F6YDE1_CALJA 0.35 0.65 1 60 75 129 60 1 5 129 F6YDE1 Uncharacterized protein OS=Callithrix jacchus GN=TFF2 PE=4 SV=1
143 : M3YCQ8_MUSPF 0.35 0.62 1 60 75 129 60 1 5 129 M3YCQ8 Uncharacterized protein OS=Mustela putorius furo GN=TFF2 PE=4 SV=1
144 : Q3V5L7_POLMI 0.35 0.54 3 59 160 212 57 1 4 266 Q3V5L7 Trefoil factor OS=Polyandrocarpa misakiensis GN=trf PE=2 SV=1
145 : Q80YV5_MOUSE 0.35 0.67 1 60 73 127 60 1 5 127 Q80YV5 Tff2 protein (Fragment) OS=Mus musculus GN=Tff2 PE=2 SV=1
146 : Q9QX97_MOUSE 0.35 0.67 1 60 75 129 60 1 5 129 Q9QX97 Trefoil Factor 2/Spasmolytic polypeptide protein OS=Mus musculus GN=Tff2 PE=2 SV=1
147 : TFF2_MOUSE 0.35 0.67 1 60 75 129 60 1 5 129 Q03404 Trefoil factor 2 OS=Mus musculus GN=Tff2 PE=2 SV=2
148 : W5PLZ4_SHEEP 0.35 0.63 1 60 77 131 60 1 5 131 W5PLZ4 Uncharacterized protein (Fragment) OS=Ovis aries GN=TFF2 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A E 0 0 219 53 57 EEEEEQQQQEQQQQQQQQQE Q QQE NRRQQQ Q E
2 2 A A - 0 0 58 59 76 AAAAASSSSTGGVVDAANVG S VDG QGGVGA T T G S
3 3 A Q - 0 0 142 65 51 QQQQQQQQQQQQQQQQQQQP E QQQ EEEEEE L A E A
4 4 A T - 0 0 56 68 72 TTTTTTTTTSQQLLTEEETT A TEA SGGTTA P T T A
5 5 A E + 0 0 169 79 29 EEEEEEEEEEEEEEVEEEEEEEEEED EDDEEEN E ND G E N
6 6 A T + 0 0 33 79 69 TTTTTTTTTTTTTTTTTTTTTTTTTN TTTTTIQ I LT T Q Q
7 7 A a + 0 0 42 129 0 CCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCC CCC CCCCCCCCCC CCCCCCC CCCCCCC
8 8 A T + 0 0 119 128 80 TTTTTTTTTATTIVTIIAVSVTVVDN VQQQQAK AEV ENAADAAAAS AAAAAAA AAEEAAA
9 9 A V - 0 0 26 131 34 VVVVVVVVVMVVVVIMMVIMVVVMMV VVVVVVV M VVV VVVVVVVVVVIVVVVVVV VVVVVIV
10 10 A A - 0 0 39 132 67 AAAAAAAAAAAADDAAAIALAAAAAA AEEEEAP N AQP QEPPAPPPPEAPPPPPPPPPAPPPPP
11 11 A P S > S+ 0 0 67 147 54 PPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPSPPPPPPSPPPPPPPAPAAAARAAAAAAAASAPPPPAA
12 12 A R T 3 S+ 0 0 239 148 73 RRRRRRRRRQHHHHRRRRSKHQHSRKHHHHHHHKHQHDHHKKQHKKNKNKKKKLHKKKKKKKGKKKKKKK
13 13 A E T 3 S+ 0 0 144 148 67 EEEEEEEEEEHHKKEEEEQEHAHQEQNHAAQQAENKNSKADDKNDKMDQDDDDANDDDDDDDPDTDDDDD
14 14 A R < - 0 0 42 148 2 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
15 15 A Q - 0 0 80 148 79 QQQQQQQQQKDDTTQIIISVATASRNKTVVTQSVKKKKESVVKKVVVVIVVVVVTVVVVVVVPVVVVVVV
16 16 A N B -A 45 0A 97 149 30 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNDDNNDNDDNDDDDNNDDDDDDDDDNDDDDD
17 17 A b - 0 0 11 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A G S S- 0 0 15 149 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGGGGG
19 19 A F - 0 0 117 149 33 FFFFFFFFFFSSSSYFFFFFAFAFYFFAFFHHYFFFFFFYYYFFYWYYFYYYYYFYYYYYYYYYPYYYYY
20 20 A P S S+ 0 0 69 149 17 PPPPPPPPPPPPPPPPPPNPPPPNPSPPSSPPPPPPPPPPPPPPPPPPSPPPPSPPPPPPPPPPPPPPPP
21 21 A G S S+ 0 0 63 149 38 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGKGGGGGGEGGGEGGEGQEQEGGKQQQEQQGHGEEEEQ
22 22 A V - 0 0 10 149 12 VVVVVIIIIVIIIIVVVVIVIVIIVIIIIIIIIVIIIIIIIVIIIVVVIVVVVIIVVVVVVVIVIIIIVV
23 23 A T >> - 0 0 68 149 41 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTT
24 24 A P H 3> S+ 0 0 89 149 57 PPPPPAAAAAPPPPPAAAPAPAPPERSPAAAARPSSPSSRPQSSPEPPQPPPPPPPPPPPPPPPASSSPP
25 25 A S H 3> S+ 0 0 84 149 64 SSSSSSSSSSSSSSSQQQASASADAEDSEEKKEEDDDEDEEKDEEQQEKEEEEQDEEEKEQKRKKEEEEE
26 26 A Q H X> S+ 0 0 89 149 39 QQQQQQQQQQQQQQEQQQQEQEQQEQQQQQEEKQQQQQQKQQQQQEQQEQQQQETQQEEQEEQEQQQQQQ
27 27 A c H 3X>S+ 0 0 0 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A A H 3<5S+ 0 0 72 149 86 AAAAATTTTAKKKKKTTKAQKKKTREFKEEKKQNFFFFFQNNFFNLNNENNNNTFNNNNNNNINEVVVNN
29 29 A N H <<5S+ 0 0 137 149 64 NNNNSSSSSSDDDDSEEEENADAASDNAKKDENNDDGASNNNDDNDNNSNNNNKGNNNNNNNNNDNNNNS
30 30 A K H <5S- 0 0 113 149 46 KKKKKRRRRKKKKKKRRKKKKKKKKRSRKKKKKRNKSASKRRKLRKRRRRRRRQRRRRRRRRQRARRRRR
31 31 A G T <5 + 0 0 51 149 31 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGHGGGGGGGGGGGGGKGGGGGGGGGGGGGGGGGGGGGGGG
32 32 A b < - 0 0 10 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A a E -B 45 0A 19 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A F E +B 44 0A 56 149 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFWFFFFFFF
35 35 A D + 0 0 53 149 37 DDDDDDDDDDDDDDDDDDDDDDDDNNDDDDDDDDDDDDDDDDDDDDDDSDDDDDDDDDDDDDDDNDDDDD
36 36 A D + 0 0 103 149 58 DDNDNDDDDDNNNNDDDDSSSDSSRDSNTTSNDNSSSTSDSSSSSTSSNSSSSSSSSSSSSSDSSSSSSS
37 37 A T S S+ 0 0 104 149 65 TTTTTSSSSTTTTTTSSSTSTTTTSKTTKKTTKSTRSTSKSSRSSTSSKSSSSTKSSSRSKRSRKSSSSS
38 38 A V S S- 0 0 93 149 26 VVVVVVVVVIVVVVVVVVVVVVVVIVVIVVVVIIVVVVVIIIVVIVVIHIIIIIIIIIIIIIVIVIIIII
39 39 A R S S+ 0 0 215 148 68 RRRRRRRRRLRRRRPRRRPPSRSPPHPSTTRRPHGAPPVPPRAAPPPHRPHXPQRPVPPPPPDPPHHHPR
40 40 A G S S+ 0 0 85 148 50 GGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGGNEGGGGGGDNRGGGEGGGGGGGGEG
41 41 A V S S- 0 0 41 148 26 VVVFVFFFFVVVVVVFFFHYVVVHYVVVVVVVVVVVVVVVVVVVVTVVVVVVVAIVVVVVVVVVVVVVVV
42 42 A P - 0 0 31 149 27 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPIPPPIPPPPPPPPPPPPPPPPPPPPPPPPP
43 43 A W S S+ 0 0 71 149 7 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
44 44 A c E S+ B 0 34A 0 148 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
45 45 A F E -AB 16 33A 3 149 1 FFFFFFFFFFYYFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFF
46 46 A Y - 0 0 113 149 91 YYYHHHHHHTYYFFQHHRYTHHHYYHNQNHQYYKHEETHYKKEHKSSKIKKKKYRKKKKKKKHKIKKKKK
47 47 A P - 0 0 54 147 22 PPPPPPPPPPPPPPPPPPPPPPPPP PPPPTTPPPPPPPPPPAPPPPPKPPPPPPPPPPPPPRPPPPPPP
48 48 A N - 0 0 59 145 78 NNNKKNNNNKVVVVAMMLLKAVALM LV AEALLLLLLALLLLLELLQLLLLRLLLLLLLLTLLLLLLL
49 49 A T - 0 0 102 145 79 TTTTTTAAATAAAALAAVnTAAASA PA PLvqPPPPPvQQPPQAQQQQQQQAPQQQQQQQiQAQQQQQ
50 50 A I - 0 0 90 41 46 IIIIIIIIIIVVVVVIIIvIVVVII .V V.da.....d........V.............a.......
51 51 A D - 0 0 129 44 42 DDDDDDDDDDDDDDNEEENDEDEND .D E.EG.....ED...D...N.............T.......
52 52 A V - 0 0 59 65 83 VVVVVVIIIVNNNNTNNNNRNDNNN MN .VAKKRMKVT.KN ...I.....K.......I.R.....
53 53 A P S S+ 0 0 121 70 76 PPPPPPPPPPPPPPPTTQVAQSQVP QS VPPQQQQQP .QQ ...S....TQ.......R.K.....
54 54 A P S S- 0 0 100 80 82 PPPPPPPPPSPPPPEQQQPQPSPPA EP GLPEEGDAL .EE I..P....PE.E.....P.Y.....
55 55 A E - 0 0 155 135 68 EEEEEEEEEEEEEEDEEEEEDEDEE SD EK SSLKSK ESS EEEEEEEEELEQEEEEEQEKDDDEE
56 56 A E - 0 0 155 132 73 EEEEEEE DEEEEGEEEED D GE EE EE EEEEEE TEE TEADTATA ETGAATAANAKTTTTT
57 57 A E + 0 0 189 128 45 EEEEEEE EEEEE EEEE E TE EE VE QQQEEE EQQ E EEEEEE EEEEEEEE EVEEEEE
58 58 A S - 0 0 105 125 8 CCCCCCC CCCCC CCCC C SC CC CC CCCCCC CCC C CCCCCC CCCCCCCC CCCCCCC
59 59 A E 0 0 194 105 84 EEEEEEE EPPSS PPPE P P S EN N T I TLTTTT KSTTTTT TPRRRTT
60 60 A F 0 0 263 82 4 FFFFFFF FFFFF FFFF F F F F F FFFFFF FFFFFFF F FFFFF
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A E 0 0 219 53 57 E E R K K KK K K KKRK
2 2 A A - 0 0 58 59 76 P P T P P G A Q Q QQ Q Q QQTQ
3 3 A Q - 0 0 142 65 51 K G A D A D Q E E K E E EEDDE E EEAA
4 4 A T - 0 0 56 68 72 T S E D A K A S S S S SSSSLKASSS LSAS
5 5 A E + 0 0 169 79 29 E E E S A A E E Q E EE EQEE ETTEEEEEGENEEEE
6 6 A T + 0 0 33 79 69 E D Q Q E Q E Q D E EQ QVQE QEEQEEQGEQEEELE
7 7 A a + 0 0 42 129 0 CCCCCCCC CCCCCC C CCCCCC CCCCCCCCCCCCCCCC CC CC CCCC CCCCCCCCCCCCCCC
8 8 A T + 0 0 119 128 80 AAPEEMML KAANAK V AVEAAE LKEKEKKKVKKSTAAS VA VQ T.AV VSSVVVVVKVQVVSV
9 9 A V - 0 0 26 131 34 IVAIVVVV QVVVVG M IFVIVV VIIIVVVIMIVVVIVV MV MV VLLM MMMMMMMMMMLMMVM
10 10 A A - 0 0 39 132 67 PPDEPPPE APPDPD E PPPPPP EAEAPVVAEAVNEPPA EP EQ EPQE ESSEDEEEEEDEERE
11 11 A P S > S+ 0 0 67 147 54 AAPPPAAP PAAPAPPPV GAAAAAPPAPAAPPPVPPPRGAPVVAVVPPPRQPVPVPPVVVVVPVPVVPV
12 12 A R T 3 S+ 0 0 239 148 73 SARKKNNSKRKKKKFKKS SKKKKKKARKRKRRKSKRKLSKNNSKNSNKKLSFSKAGGASSEKSASSSAS
13 13 A E T 3 S+ 0 0 144 148 67 EEISDVVLDEDDTDKAAD EEDDNDAMEAEDEEEAEEEAENMPADPAAAAAAAAAAAAAVAAAKAADADA
14 14 A R < - 0 0 42 148 2 RRRRRRRRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRAR
15 15 A Q - 0 0 80 148 79 VVVIVVVQVRVVTVTVVK VVVVVVVHRIRVTTKVKTEVVVVYKVYKLVVVTVRVKVVKKVKVAKQEKLR
16 16 A N B -A 45 0A 97 149 30 DDNNDDDEDNDDNDDNNDEDNDDDDNENNNDNNNNNNENDDNENDENNNNNDNDNNDDNNNNNDNDNDAN
17 17 A b - 0 0 11 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A G S S- 0 0 15 149 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
19 19 A F - 0 0 117 149 33 YYYPYYYWYYYYPYYYFFFYYYYYYYWPPPYYYHYHYYYYYYFYYFYYYYYYYYYYYYYYYYYYYWYYEY
20 20 A P S S+ 0 0 69 149 17 PPPPPPPGPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPSPPPPPPPPPPPSPPPPPSSPPPPPPPGPPPP
21 21 A G S S+ 0 0 63 149 38 ERGGESTGEGQQGEGGGGGANEEEEGGGGGEGGGGGGGGAETGGQGGHGGGGYGGGGGGGGGAGGGGGQG
22 22 A V - 0 0 10 149 12 VVIIIVVIIIIVIVIIIIVIIIVIIIIIIIIIIIIIIIIIIVVIVVIIIIIIIIIIVVIIIIIIIIIIVI
23 23 A T >> - 0 0 68 149 41 TTTSTTTTTSTTSTTTSTTGDSTSSTTSTSSSSSSSSTTGSTTSSTSSSSTQSSSSSSSSSSSTSTSSGS
24 24 A P H 3> S+ 0 0 89 149 57 AKAQSSSQSAPPPQESAPEKQSPPSSSAPASAAAPAAAAKPEEPPEPASSAPAPSPEEPPPPPEPPPPEP
25 25 A S H 3> S+ 0 0 84 149 64 EEKTEEEHEVEQEEGQEKFEEEEEEQDAIAEAAAEAAEDEEAFEEFEQQQDSEQQQSSQQEEESQAEEAE
26 26 A Q H X> S+ 0 0 89 149 39 QQEEQQQQQEQEEQQDDDHDAQQQQDQDEDQEEDDDEEEDQDHDQHDEDDEAEEDEQQEEDETQEEEERE
27 27 A c H 3X>S+ 0 0 0 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A A H 3<5S+ 0 0 72 149 86 NQINVNNRVRNNRNKDDIVNTTNVTDRRNRTKKRARKNTNVRVANVAYDDTTNADARRAAAAKRAQAERA
29 29 A N H <<5S+ 0 0 137 149 64 NNSNNNNQNKSNNSAKHSaNNNNNNKSRTKNKKKSKKNKNNAaANaRNSSKQNSSSNNSASSSSSESSAS
30 30 A K H <5S- 0 0 113 149 46 RRRKRRRRRARRSRKKKRrRRRRRRKKAKARIIARAIRHRRVrRRrRRKKHLRRKRKKRRRRRKRRRRKR
31 31 A G T <5 + 0 0 51 149 31 GGRGGGGGGGGGGGGGGQGGGGGGGGGGGGGGGGKGGGGGGGGNGGNGGGGGGKGNSSNKKNGGNGKKQK
32 32 A b < - 0 0 10 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A a E -B 45 0A 19 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A F E +B 44 0A 56 149 1 FFFFFFFFFFFFFFFFFFWFFFFFFFYFFFFFFFFFFFFFFFWFFWFFFFFWFFFFFFFFFFFFFFFFFF
35 35 A D + 0 0 53 149 37 DDRNDDDDDNDDSDDNNNDDDDDDDNnNDNDNNNSNNSDDDDDSDDSDNNDNDSNSDDSSSSDDSDSSDS
36 36 A D + 0 0 103 149 58 SNASSSSSSAASSSSDDNASSSSSSDaASASAAADAASSSSSADSADSDDSTNDDDSSDDDDDSDSDNSD
37 37 A T S S+ 0 0 104 149 65 SSHRSSSSSSSKESSTTANKSSSSSTTSSSSSSSTSSAKKSSNTSNTSAAKDSVATSSTTTTQSTSDTSN
38 38 A V S S- 0 0 93 149 26 IIPIIIIVIVIIVIIIIVSTIIIIIITVIVIVVVIVVIVTIISIISIIIIVVIIIIIIIIIIIIIFIIVI
39 39 A R S S+ 0 0 215 148 68 PRASHPPPHPFPPPVPPPpPRHPPHPrPVPHPPPPPPPAPPLpPPpPVPPALPPPRPPRVPPPPRQTPNF
40 40 A G S S+ 0 0 85 148 50 ENGGGNNTGGEGDQGNNRrGGGEEGNeGGGGSSGEGSNDGENrEErEGNNDGDQNNNNNNEQEQNDQK.E
41 41 A V S S- 0 0 41 148 26 VVVVVVVMVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVAVVTVVVVVVVVAVVVVVVVVVVVVTVAVV.V
42 42 A P - 0 0 31 149 27 PPPIPPPKPPPPPPKVVPPPPPPPPVPPIPPPPPPPPKIPPKPPPPPIVVIPIPVPKKPPPPPKPPPPPP
43 43 A W S S+ 0 0 71 149 7 WWWWWWWWWWWWWWWWWWQWWWWWWWWWWWWWWWWWWWWWWWQWWQWWWWWWWWWWWWWWWWWWWWWWSW
44 44 A c E S+ B 0 34A 0 148 0 CCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
45 45 A F E -AB 16 33A 3 149 1 FFFFFFFFFFFYFFFYYFFFFFFFFYFFFFFYYFFFYFYFFFFFFFFFYYYFFFYFFFFFFFFFFFFFFF
46 46 A Y - 0 0 113 149 91 KKYYKKKHKAKKTKFQQFQKEKKKKQHTYTKNNTFTNKYKKYQFKQFFQQYHFFQFYYFFFFYYFYFFYF
47 47 A P - 0 0 54 147 22 PAHPPPPKPPPPPPPPPPPPPPPPPP APAPPPAPAPPPPPNPPPPPPPPPRPPPPTTPPPPPSPSPPKP
48 48 A N - 0 0 59 145 78 LLRKLLLKLKLLLLRIIKNLMLLLLI KKKLKKKKKKNRLLANMLNMQIIRTGLIIQQIIKLLLITIINM
49 49 A T - 0 0 102 145 79 QQTPQQQGQVQQPQTIIPGQQQQQQI PAPQPPPPPPEAQQTGSqGSQIIAAPPILSSLSPSPPLGSSDS
50 50 A I - 0 0 90 41 46 .......V.........V........ .E.....V......A..t........V.............V..
51 51 A D - 0 0 129 44 42 .......S.........E....E... .Q.....Q......G..G........Q.............E..
52 52 A V - 0 0 59 65 83 ....... .K..K..EQ ....T..E KAK.KKKDKK..E.P..E...EE.V. E............ ..
53 53 A P S S+ 0 0 121 70 76 ....... .K..K..AA P...A..A KIK.KKKMKK..T.IP.KP.NAA.S. A............ ..
54 54 A P S S- 0 0 100 80 82 ..V.... .V..Y.AVV K...G..V VSV.VVVQVV..A.KK.LK.EVV.AT V.QQ.....Q... V.
55 55 A E - 0 0 155 135 68 EDEEDEE DREEKEREE NEKDNDDE KKKDKKKKKK.TEDKNVLNVGEETDN ENVVNVVVVVN.V TV
56 56 A E - 0 0 155 132 73 ATEETTT TKTAKTARR LTETGTTR KKKTKKKEKKSPSTLLERLEGRRPGE RQAAQEQQNAQGE VD
57 57 A E + 0 0 189 128 45 EEGDEEE EVEEVEQDD DEEEDEED VDVEVVVDVVVEQVEDDLDDNDDAEE DDDDDDDDEDDAD ED
58 58 A S - 0 0 105 125 8 CCCCCCC CCCCCCCCC FCCC CCC CCCCCCC CCCCCCCFCCFCCCCC C CCCCCCCCCCCCC CC
59 59 A E 0 0 194 105 84 TT FRTT RPTT TLSS NTTR TRS P P PPP PPA VGSNHVNHNSS V SH HSHHH H H TH
60 60 A F 0 0 263 82 4 FF FFFF F FF FF FFFF FF FF FYLFY L Y YYYYY Y Y Y
## ALIGNMENTS 141 - 148
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A E 0 0 219 53 57 KKK NNNK
2 2 A A - 0 0 58 59 76 QQQ QQQQ
3 3 A Q - 0 0 142 65 51 AEEEEEEE
4 4 A T - 0 0 56 68 72 SSSRSSSS
5 5 A E + 0 0 169 79 29 EEEDEEEE
6 6 A T + 0 0 33 79 69 EQQEQQQE
7 7 A a + 0 0 42 129 0 CCCCCCCC
8 8 A T + 0 0 119 128 80 VVVDVVVV
9 9 A V - 0 0 26 131 34 MMMVMMMM
10 10 A A - 0 0 39 132 67 EEEDEEEE
11 11 A P S > S+ 0 0 67 147 54 VVVGVVVV
12 12 A R T 3 S+ 0 0 239 148 73 KSSASSSS
13 13 A E T 3 S+ 0 0 144 148 67 AATKAAAA
14 14 A R < - 0 0 42 148 2 RRRRRRRR
15 15 A Q - 0 0 80 148 79 VRRVKKKK
16 16 A N B -A 45 0A 97 149 30 NNDDNNND
17 17 A b - 0 0 11 149 0 CCCCCCCC
18 18 A G S S- 0 0 15 149 1 GGGGGGGG
19 19 A F - 0 0 117 149 33 YYYFYYYY
20 20 A P S S+ 0 0 69 149 17 PPPWPPPP
21 21 A G S S+ 0 0 63 149 38 GGGGGGGG
22 22 A V - 0 0 10 149 12 IIIIIIII
23 23 A T >> - 0 0 68 149 41 PSSTSSSS
24 24 A P H 3> S+ 0 0 89 149 57 LPPKPPPP
25 25 A S H 3> S+ 0 0 84 149 64 EEEEEEEE
26 26 A Q H X> S+ 0 0 89 149 39 TEEQDDDE
27 27 A c H 3X>S+ 0 0 0 149 0 CCCCCCCC
28 28 A A H 3<5S+ 0 0 72 149 86 KAAGAAAE
29 29 A N H <<5S+ 0 0 137 149 64 ESSDSSSS
30 30 A K H <5S- 0 0 113 149 46 RRRRRRRR
31 31 A G T <5 + 0 0 51 149 31 GKKGNNNK
32 32 A b < - 0 0 10 149 0 CCCCCCCC
33 33 A a E -B 45 0A 19 149 0 CCCCCCCC
34 34 A F E +B 44 0A 56 149 1 FFFWFFFF
35 35 A D + 0 0 53 149 37 DSSDSSSS
36 36 A D + 0 0 103 149 58 DNDSNNND
37 37 A T S S+ 0 0 104 149 65 HLNSLLLT
38 38 A V S S- 0 0 93 149 26 IIITIIII
39 39 A R S S+ 0 0 215 148 68 PFVAFFFP
40 40 A G S S+ 0 0 85 148 50 QEEGEEEQ
41 41 A V S S- 0 0 41 148 26 VVVAVVVV
42 42 A P - 0 0 31 149 27 PPPPPPPP
43 43 A W S S+ 0 0 71 149 7 WWWWWWWW
44 44 A c E S+ B 0 34A 0 148 0 CCCCCCCC
45 45 A F E -AB 16 33A 3 149 1 FFFFFFFF
46 46 A Y - 0 0 113 149 91 RFFNFFFF
47 47 A P - 0 0 54 147 22 PPPSPPPP
48 48 A N - 0 0 59 145 78 IKIKQQQI
49 49 A T - 0 0 102 145 79 PSPNSSSS
50 50 A I - 0 0 90 41 46 ........
51 51 A D - 0 0 129 44 42 ........
52 52 A V - 0 0 59 65 83 ........
53 53 A P S S+ 0 0 121 70 76 ........
54 54 A P S S- 0 0 100 80 82 ...V....
55 55 A E - 0 0 155 135 68 VVVEVVVV
56 56 A E - 0 0 155 132 73 NEEAEEEE
57 57 A E + 0 0 189 128 45 DDDNDDDD
58 58 A S - 0 0 105 125 8 CCCCCCCC
59 59 A E 0 0 194 105 84 HHHSHHHH
60 60 A F 0 0 263 82 4 YYY YYYY
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 25 38 23 8 0 53 0 0 1.439 48 0.42
2 2 A 8 0 0 0 0 0 0 15 17 7 10 8 0 0 0 0 29 0 2 3 59 0 0 1.963 65 0.23
3 3 A 0 2 0 0 0 0 0 2 11 2 0 0 0 0 0 3 37 38 0 6 65 0 0 1.447 48 0.48
4 4 A 0 6 0 0 0 0 0 3 12 1 34 28 0 0 1 3 3 7 0 1 68 0 0 1.831 61 0.28
5 5 A 1 0 0 0 0 0 0 3 3 0 1 3 0 0 0 0 3 76 5 6 79 0 0 1.018 33 0.70
6 6 A 1 3 3 0 0 0 0 1 0 0 0 42 0 0 0 0 24 23 1 3 79 0 0 1.490 49 0.30
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 129 1 0 0.000 0 1.00
8 8 A 23 2 2 2 0 0 0 0 27 1 5 13 0 0 0 9 5 8 2 2 128 0 0 2.096 69 0.19
9 9 A 60 2 11 24 1 0 0 1 1 0 0 0 0 0 0 0 1 0 0 0 131 0 0 1.127 37 0.65
10 10 A 2 1 1 0 0 0 0 0 27 31 2 0 0 0 1 0 3 26 2 6 132 0 0 1.664 55 0.32
11 11 A 16 0 0 0 0 0 0 2 23 54 2 0 0 0 2 0 1 0 0 0 147 0 0 1.240 41 0.45
12 12 A 0 2 0 0 1 0 0 2 5 0 17 0 0 13 15 36 3 1 5 1 148 0 0 1.898 63 0.26
13 13 A 2 1 1 2 0 0 0 0 26 2 1 2 0 3 0 6 4 22 5 23 148 0 0 2.021 67 0.32
14 14 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 99 0 0 0 0 0 148 0 0 0.040 1 0.98
15 15 A 45 1 4 0 0 0 1 0 2 1 3 8 0 1 5 16 9 2 1 1 148 0 0 1.895 63 0.21
16 16 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 4 59 36 149 0 0 0.842 28 0.69
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
18 18 A 0 0 0 0 0 0 0 99 1 0 0 0 0 0 0 0 0 0 0 0 149 0 0 0.071 2 0.99
19 19 A 0 0 0 0 26 3 60 0 2 4 3 0 0 3 0 0 0 1 0 0 149 0 0 1.189 39 0.67
20 20 A 0 0 0 0 0 1 0 1 1 90 6 0 0 0 0 0 0 0 1 0 149 0 0 0.448 14 0.83
21 21 A 0 0 0 0 0 0 1 70 2 0 1 1 0 1 1 1 8 13 1 0 149 0 0 1.110 37 0.61
22 22 A 32 0 68 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 149 0 0 0.628 20 0.88
23 23 A 0 0 0 0 0 0 0 2 0 1 30 66 0 0 0 0 1 0 0 1 149 0 0 0.817 27 0.58
24 24 A 0 1 0 0 0 0 0 0 21 47 15 0 0 0 2 3 4 7 0 0 149 0 0 1.501 50 0.42
25 25 A 1 0 1 0 2 0 0 1 9 0 15 1 0 1 1 7 13 42 0 7 149 0 0 1.791 59 0.35
26 26 A 0 0 0 0 0 0 0 0 1 0 0 2 0 2 1 1 51 28 0 14 149 0 0 1.281 42 0.60
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
28 28 A 7 1 2 0 6 0 1 1 17 0 0 10 0 0 9 12 3 5 23 4 149 0 0 2.262 75 0.13
29 29 A 0 0 0 0 0 0 0 1 9 0 25 1 0 1 1 9 1 5 38 9 149 0 3 1.755 58 0.36
30 30 A 1 1 2 0 0 0 0 0 5 0 3 0 0 1 56 29 1 0 1 0 149 0 0 1.242 41 0.54
31 31 A 0 0 0 0 0 0 0 83 0 0 1 0 0 1 1 7 1 0 6 0 149 0 0 0.703 23 0.69
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
34 34 A 0 0 0 0 95 4 1 0 0 0 0 0 0 0 0 0 0 0 0 0 149 0 0 0.209 6 0.99
35 35 A 0 0 0 0 0 0 0 0 0 0 15 0 0 0 1 0 0 0 14 70 149 0 1 0.839 28 0.62
36 36 A 0 0 0 0 0 0 0 0 9 0 48 3 0 0 1 0 0 0 12 27 149 0 0 1.331 44 0.42
37 37 A 1 3 0 0 0 0 0 0 3 0 46 27 0 1 4 9 1 1 3 1 149 0 0 1.604 53 0.35
38 38 A 38 0 56 0 1 0 0 0 0 1 2 3 0 1 0 0 0 0 0 0 149 0 0 0.970 32 0.74
39 39 A 5 2 0 0 4 0 0 1 5 48 3 2 0 8 20 0 1 0 1 1 148 1 4 1.713 57 0.32
40 40 A 0 0 0 0 0 0 0 56 0 0 2 1 0 0 4 1 5 14 14 4 148 0 0 1.423 47 0.49
41 41 A 84 0 1 1 5 0 1 0 3 0 0 2 0 1 0 0 0 0 0 0 148 0 0 0.702 23 0.74
42 42 A 4 0 5 0 0 0 0 0 0 86 0 0 0 0 0 5 0 0 0 0 149 0 0 0.561 18 0.72
43 43 A 0 0 0 0 0 97 0 0 0 0 1 0 0 0 0 0 2 0 0 0 149 1 0 0.139 4 0.92
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 148 0 0 0.000 0 1.00
45 45 A 0 0 0 0 90 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 149 0 0 0.327 10 0.99
46 46 A 0 0 1 0 17 0 17 0 1 0 1 5 0 13 2 28 8 3 4 0 149 0 0 2.038 68 0.08
47 47 A 0 0 0 0 0 0 0 0 4 86 2 3 0 1 1 2 0 0 1 0 147 0 0 0.640 21 0.78
48 48 A 4 41 10 5 0 0 0 1 5 0 0 2 0 0 3 14 5 1 9 0 145 0 0 1.951 65 0.21
49 49 A 3 3 5 0 0 0 0 3 14 19 10 8 0 0 0 0 30 1 1 1 145 104 6 2.006 66 0.21
50 50 A 41 0 41 0 0 0 0 0 7 0 0 2 0 0 0 0 0 2 0 5 41 0 0 1.250 41 0.53
51 51 A 0 0 0 0 0 0 0 7 0 0 2 2 0 0 0 0 7 25 9 48 44 0 0 1.456 48 0.58
52 52 A 17 0 8 3 0 0 0 0 3 2 0 5 0 0 5 22 2 11 22 3 65 0 0 2.133 71 0.17
53 53 A 4 0 3 1 0 0 0 0 11 33 6 6 0 0 1 16 17 0 1 0 70 0 0 1.952 65 0.24
54 54 A 21 4 1 0 0 0 3 4 6 29 4 1 0 0 0 5 10 11 0 1 80 0 0 2.113 70 0.18
55 55 A 13 2 0 0 0 0 0 1 0 0 4 2 0 0 1 12 1 44 6 12 135 0 0 1.771 59 0.32
56 56 A 1 3 0 0 0 0 0 5 11 2 2 18 0 0 5 8 4 35 2 4 132 0 0 2.047 68 0.27
57 57 A 10 1 0 0 0 0 0 1 2 0 0 1 0 0 0 0 5 53 2 26 128 0 0 1.320 44 0.54
58 58 A 0 0 0 0 2 0 0 0 0 0 2 0 96 0 0 0 0 0 0 0 125 0 0 0.195 6 0.92
59 59 A 3 2 1 0 1 0 0 1 1 15 12 24 0 16 7 1 0 10 6 0 105 0 0 2.161 72 0.16
60 60 A 0 2 0 0 76 0 22 0 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.635 21 0.95
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
19 50 74 1 nIv
33 50 71 1 vVd
34 46 221 1 qEa
40 50 78 1 vVd
63 41 66 1 iSa
89 15 82 1 aIr
89 25 93 1 pFr
97 36 856 1 nTa
97 40 861 1 rPe
113 20 591 1 aIr
113 30 602 1 pFr
115 44 75 1 qEt
116 20 591 1 aIr
116 30 602 1 pFr
//