Complet list of 1oyi hssp file
Complete list of 1oyi.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1OYI
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-05
HEADER VIRAL PROTEIN 04-APR-03 1OYI
COMPND MOL_ID: 1; MOLECULE: DOUBLE-STRANDED RNA-BINDING PROTEIN; CHAIN: A; FR
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: VACCINIA VIRUS; ORGANISM_TAXID: 10245;
AUTHOR J.D.KAHMANN,D.A.WECKING,V.PUTTER,K.LOWENHAUPT,Y.-G.KIM, P.SCHMIEDER,H.
DBREF 1OYI A 5 81 UNP Q86638 Q86638_9POXV 2 78
SEQLENGTH 62
NCHAIN 1 chain(s) in 1OYI data set
NALIGN 72
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A4GDB4_9POXV 1.00 1.00 1 62 9 70 62 0 0 190 A4GDB4 Double-stranded RNA-specific adenosine deaminase-like protein p25 OS=Vaccinia virus GN=List055 PE=4 SV=1
2 : A9CBE2_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 A9CBE2 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
3 : E3_VACCW 1.00 1.00 1 62 9 70 62 0 0 190 P21605 Protein E3 OS=Vaccinia virus (strain Western Reserve) GN=VACWR059 PE=1 SV=1
4 : E9N3T3_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 E9N3T3 E3L (Fragment) OS=Vaccinia virus PE=4 SV=1
5 : L7QJC9_9POXV 1.00 1.00 1 62 9 70 62 0 0 190 L7QJC9 Double-strand RNA-binding protein OS=Vaccinia virus GN=E3L PE=4 SV=1
6 : Q07C36_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 Q07C36 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
7 : Q07C37_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 Q07C37 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
8 : Q09S71_9POXV 1.00 1.00 1 62 8 69 62 0 0 189 Q09S71 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
9 : Q09XT3_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 Q09XT3 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
10 : Q09XT6_9POXV 1.00 1.00 1 62 3 64 62 0 0 179 Q09XT6 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
11 : Q0GP28_HSPV 1.00 1.00 1 62 9 70 62 0 0 190 Q0GP28 HSPV060 OS=Horsepox virus PE=4 SV=1
12 : Q6RZP3_9POXV 1.00 1.00 1 62 9 70 62 0 0 190 Q6RZP3 RPXV048 OS=Rabbitpox virus GN=RPXV048 PE=4 SV=1
13 : Q7TEI7_9POXV 1.00 1.00 1 62 9 70 62 0 0 107 Q7TEI7 TE3L+T34L protein (Fragment) OS=Vaccinia virus PE=4 SV=1
14 : Q86638_9POXV1OYI 1.00 1.00 1 62 9 70 62 0 0 190 Q86638 Double-stranded RNA-binding protein OS=Vaccinia virus GN=E3L PE=1 SV=1
15 : Q9JFD6_VACCT 1.00 1.00 1 62 9 70 62 0 0 81 Q9JFD6 TE4L OS=Vaccinia virus (strain Tian Tan) PE=4 SV=1
16 : B2BC06_9POXV 0.98 1.00 1 62 8 69 62 0 0 189 B2BC06 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
17 : G0XTB9_COWPX 0.98 1.00 1 62 9 70 62 0 0 190 G0XTB9 Double-stranded RNA binding protein OS=Cowpox virus GN=CPXV_FIN2000_MAN_064 PE=4 SV=1
18 : G0XUJ7_COWPX 0.98 1.00 1 62 9 70 62 0 0 190 G0XUJ7 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
19 : J7FB54_9POXV 0.98 1.00 1 62 9 70 62 0 0 190 J7FB54 Double-stranded RNA-binding protein OS=Buffalopox virus GN=E3L PE=4 SV=1
20 : M9XJZ1_9POXV 0.98 1.00 1 62 9 70 62 0 0 190 M9XJZ1 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_TP3_063 PE=4 SV=1
21 : Q1M1R1_9POXV 0.98 1.00 1 62 9 70 62 0 0 190 Q1M1R1 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_DPP21_069 PE=4 SV=1
22 : Q1PIZ1_9POXV 0.98 1.00 1 62 9 70 62 0 0 190 Q1PIZ1 VACV056 OS=Vaccinia virus GN=VACV_056 PE=4 SV=1
23 : Q49PS9_9POXV 0.98 1.00 1 62 9 70 62 0 0 190 Q49PS9 Double-stranded RNA-specific adenosine OS=Vaccinia virus GN=m8069L PE=4 SV=1
24 : V5QZ82_9POXV 0.98 0.98 1 62 9 70 62 0 0 190 V5QZ82 Double-stranded RNA-specific adenosine deaminase-like protein p25 OS=Vaccinia virus GN=W86/88-1-055 PE=4 SV=1
25 : Q4PL71_9POXV 0.97 0.98 1 62 9 70 62 0 0 190 Q4PL71 Putative double-stranded RNA binding protein OS=Vaccinia virus PE=4 SV=1
26 : Q80E10_COWPX 0.97 0.98 1 62 9 70 62 0 0 190 Q80E10 F3L protein OS=Cowpox virus GN=F3L PE=4 SV=1
27 : A9J1K4_VACCA 0.95 0.97 1 62 9 70 62 0 0 190 A9J1K4 Double-stranded RNA binding protein OS=Vaccinia virus (strain Ankara) GN=CVA065 PE=4 SV=1
28 : B9U1D0_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 B9U1D0 Double-stranded RNA binding protein OS=Vaccinia virus GLV-1h68 GN=GL075 PE=4 SV=1
29 : E3_VACCC 0.95 0.97 1 62 9 70 62 0 0 190 P21081 Protein E3 OS=Vaccinia virus (strain Copenhagen) GN=E3L PE=2 SV=1
30 : G0XSF4_COWPX 0.95 0.97 1 62 9 70 62 0 0 189 G0XSF4 Double-stranded RNA binding protein OS=Cowpox virus GN=CPXV_AUS1999_867_064 PE=4 SV=1
31 : H2DS75_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 H2DS75 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_DPP9_069 PE=4 SV=1
32 : H2DSW3_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 H2DSW3 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_DPP10_069 PE=4 SV=1
33 : H2DUY0_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 H2DUY0 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_DPP13_069 PE=4 SV=1
34 : J7FAL7_9POXV 0.95 0.98 1 62 9 70 62 0 0 190 J7FAL7 Double-stranded RNA-binding protein OS=Buffalopox virus GN=E3L PE=4 SV=1
35 : M9WB52_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 M9WB52 IFN resistance/PKR inhibitor OS=Vaccinia virus GN=VACV_TT8_071 PE=4 SV=1
36 : M9WE13_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 M9WE13 IFN resistance/PKR inhibitor OS=Vaccinia virus GN=VACV_TT12_071 PE=4 SV=1
37 : O57186_9POXV 0.95 0.97 1 62 9 70 62 0 0 190 O57186 Double-stranded RNA binding protein OS=Vaccinia virus GN=MVA050L PE=4 SV=1
38 : E9N3T4_9POXV 0.94 0.97 1 62 3 64 62 0 0 179 E9N3T4 E3L (Fragment) OS=Vaccinia virus PE=4 SV=1
39 : G0XTY2_COWPX 0.94 0.97 1 62 9 70 62 0 0 192 G0XTY2 Double-stranded RNA binding protein OS=Cowpox virus GN=CPXV_FRA2001_NANCY_064 PE=4 SV=1
40 : G0XX01_COWPX 0.94 0.97 1 62 9 70 62 0 0 190 G0XX01 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
41 : H2DUQ2_9POXV 0.94 0.97 1 62 9 70 62 0 0 190 H2DUQ2 Double-stranded RNA binding protein OS=Vaccinia virus GN=VAC_DPP12_069 PE=4 SV=1
42 : Q09XT4_9POXV 0.94 0.95 1 62 3 64 62 0 0 179 Q09XT4 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
43 : Q09XT5_9POXV 0.94 0.95 1 62 3 64 62 0 0 179 Q09XT5 Double-stranded RNA-binding protein (Fragment) OS=Vaccinia virus PE=4 SV=1
44 : Q0NPF1_9POXV 0.94 0.97 1 62 9 70 62 0 0 190 Q0NPF1 Double-stranded RNA binding protein OS=Taterapox virus GN=TATV_DAH68_060 PE=4 SV=1
45 : Q0NQ16_COWPX 0.94 0.97 1 62 9 70 62 0 0 194 Q0NQ16 Double-stranded RNA binding protein OS=Cowpox virus GN=CPXV_GER1998_2_064 PE=4 SV=1
46 : Q5U9R4_9POXV 0.94 0.95 1 62 9 70 62 0 0 190 Q5U9R4 Putative double-stranded RNA binding protein OS=Cantagalo virus PE=4 SV=1
47 : Q775Y2_CAMPS 0.94 0.97 1 62 9 70 62 0 0 190 Q775Y2 CMP55L OS=Camelpox virus (strain CMS) GN=CMP55L PE=4 SV=1
48 : Q8V2W2_CAMPM 0.94 0.97 1 62 9 70 62 0 0 190 Q8V2W2 Putative dsRNA-binding PKR inhibitor OS=Camelpox virus (strain M-96) PE=4 SV=1
49 : U5TET2_COWPX 0.94 0.97 1 62 9 70 62 0 0 190 U5TET2 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
50 : U5TF50_COWPX 0.94 0.97 1 62 9 70 62 0 0 190 U5TF50 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
51 : U5TKL2_COWPX 0.93 0.97 1 61 9 69 61 0 0 190 U5TKL2 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
52 : E3_VAR67 0.92 0.95 1 62 9 70 62 0 0 190 P33863 Protein E3 OS=Variola virus (isolate Human/India/Ind3/1967) GN=E3L PE=3 SV=1
53 : G0XXL3_COWPX 0.92 0.95 1 61 9 69 61 0 0 190 G0XXL3 Double-stranded RNA binding protein OS=Cowpox virus GN=CPXV_UK2000_K2984_064 PE=4 SV=1
54 : Q0N5A3_VARV 0.92 0.95 1 62 9 70 62 0 0 190 Q0N5A3 Double-stranded RNA binding protein OS=Variola virus GN=VARV_AFG70_vlt4_047 PE=4 SV=1
55 : Q0N5W0_VARV 0.92 0.95 1 62 9 70 62 0 0 192 Q0N5W0 Double-stranded RNA binding protein OS=Variola virus GN=VARV_BOT72_143_047 PE=4 SV=1
56 : Q0NAG8_VARV 0.92 0.95 1 62 9 70 62 0 0 192 Q0NAG8 Double-stranded RNA binding protein OS=Variola virus GN=VARV_SOM77_1252_047 PE=4 SV=1
57 : Q0NBM3_VARV 0.92 0.95 1 62 9 70 62 0 0 192 Q0NBM3 Double-stranded RNA binding protein OS=Variola virus GN=VARV_BEN68_59_047 PE=4 SV=1
58 : Q0NCS8_VAR65 0.92 0.95 1 62 9 70 62 0 0 192 Q0NCS8 Double-stranded RNA binding protein OS=Variola virus (isolate Human/South Africa/102/1965) GN=VARV_SAF65_102_047 PE=4 SV=1
59 : Q0NG95_VAR46 0.92 0.95 1 62 9 70 62 0 0 190 Q0NG95 Double-stranded RNA binding protein OS=Variola virus (isolate Human/Japan/Yamada MS-2(A)/1946) GN=VARV_JAP46_yam_047 PE=4 SV=1
60 : Q0NM10_VAR66 0.92 0.95 1 62 9 70 62 0 0 192 Q0NM10 Double-stranded RNA binding protein OS=Variola virus (isolate Human/Brazil/v66-39/1966) GN=VARV_BRZ66_39_047 PE=4 SV=1
61 : Q85372_VARV 0.92 0.95 1 62 9 70 62 0 0 192 Q85372 Homolog of vaccinia virus CDS E3L OS=Variola major virus GN=E3L PE=4 SV=1
62 : Q91ER1_COWPX 0.92 0.95 1 61 9 69 61 0 0 190 Q91ER1 CPXV069 protein OS=Cowpox virus GN=CPXV069 CDS PE=4 SV=1
63 : Q9QNK2_VARV 0.92 0.95 1 62 9 70 62 0 0 192 Q9QNK2 C3L protein OS=Variola minor virus GN=C3L PE=4 SV=1
64 : U5TBZ3_COWPX 0.92 0.95 1 62 9 70 62 0 0 190 U5TBZ3 CPXV069 protein OS=Cowpox virus GN=CPXV069 PE=4 SV=1
65 : I0AZB7_9POXV 0.89 0.93 2 62 10 70 61 0 0 190 I0AZB7 Interferon resistance and PKR inhibitor OS=Ectromelia virus ERPV GN=ERPV_046 PE=4 SV=1
66 : Q91EP5_9POXV 0.89 0.93 2 62 10 70 61 0 0 190 Q91EP5 DsRNA binding protein OS=Ectromelia virus GN=EVM043 PE=4 SV=1
67 : I3MMD8_SPETR 0.39 0.67 11 58 120 168 49 1 1 1149 I3MMD8 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=ADAR PE=4 SV=1
68 : J9PCS6_CTEID 0.39 0.59 11 58 265 313 49 1 1 1392 J9PCS6 Double-stranded RNA-specific adenosine deaminase OS=Ctenopharyngodon idella GN=ADAR PE=2 SV=1
69 : L7RXQ4_CTEID 0.39 0.59 11 58 265 313 49 1 1 1392 L7RXQ4 RNA-specific adenosine deaminase OS=Ctenopharyngodon idella GN=adar PE=2 SV=1
70 : M1QSW4_CTEID 0.39 0.59 11 58 265 313 49 1 1 1107 M1QSW4 ADAR1-like protein OS=Ctenopharyngodon idella PE=2 SV=1
71 : Q803S9_DANRE 0.38 0.53 7 58 261 313 53 1 1 917 Q803S9 Adar protein OS=Danio rerio GN=adar PE=2 SV=1
72 : H6TAJ6_9POXV 0.36 0.67 5 58 11 65 55 1 1 192 H6TAJ6 Interferon resistance protein OS=Cotia virus SPAn232 GN=COTV051 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 13 A R 0 0 267 65 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
2 14 A S - 0 0 77 67 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
3 15 A N S > S+ 0 0 83 67 28 NNNNNNNNNNNNNNNDDDDNNNDNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
4 16 A A H > S+ 0 0 43 67 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
5 17 A E H > S+ 0 0 86 68 7 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA
6 18 A I H > S+ 0 0 88 68 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
7 19 A V H X S+ 0 0 33 69 5 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
8 20 A C H X S+ 0 0 81 69 26 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
9 21 A E H X S+ 0 0 122 69 47 EEEEEEEEEEEEEEEEEEEEEEEAAEAAAAAAAEAAAQEEAAAEEAEEEEEEEEEEEEEEEEEEEE
10 22 A A H X S+ 0 0 26 69 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
11 23 A I H X S+ 0 0 12 73 27 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIFIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLLL
12 24 A K H < S+ 0 0 163 73 19 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
13 25 A T H < S+ 0 0 111 73 73 TTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNESSS
14 26 A I H < S- 0 0 57 73 31 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLLL
15 27 A G S < S+ 0 0 41 73 21 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
16 28 A I S S+ 0 0 116 73 78 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILLIIILLILLLLLLLLLLLLLLLLLLLLEPPP
17 29 A E S > S+ 0 0 123 73 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEgddd
18 30 A G T 3 - 0 0 0 73 47 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGdttt
19 31 A A E 3 +A 58 0A 5 73 62 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAVVVVVVVVAVAAATVVV
20 32 A T E <> -A 57 0A 22 73 49 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTHHH
21 33 A A H > S+ 0 0 46 73 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
22 34 A A H > S+ 0 0 46 73 95 AAAAAAAAAAAAAAAAAAATTTAAAAAAAAAAAAAAAAVVTAAVVAVVVVVVVVVVVVVVVVVVVVRRRR
23 35 A Q H >> S+ 0 0 56 73 49 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEAAA
24 36 A L H 3X S+ 0 0 20 73 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
25 37 A T H 3< S+ 0 0 13 73 51 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAGGG
26 38 A R H << S+ 0 0 196 73 21 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKKK
27 39 A Q H < S+ 0 0 115 73 48 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKKKK
28 40 A L S < S- 0 0 58 73 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
29 41 A N S S- 0 0 133 73 28 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNRNNN
30 42 A M S S+ 0 0 140 73 20 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVLLL
31 43 A E >> + 0 0 100 73 61 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEPPPP
32 44 A K H 3> + 0 0 105 73 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
33 45 A R H 3> S+ 0 0 214 73 48 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRTTT
34 46 A E H <> S+ 0 0 122 73 66 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEKKEEKEEEEEEEEEEEEEEEEEEEEEIII
35 47 A V H X S+ 0 0 10 73 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
36 48 A N H X S+ 0 0 92 73 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
37 49 A K H X S+ 0 0 145 73 8 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKK
38 50 A A H X S+ 0 0 31 73 25 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
39 51 A L H X S+ 0 0 21 73 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
40 52 A Y H X S+ 0 0 113 73 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
41 53 A D H X S+ 0 0 99 73 47 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDSAAA
42 54 A L H X>S+ 0 0 30 73 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
43 55 A Q H <5S+ 0 0 66 73 65 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQALLL
44 56 A R H <5S+ 0 0 179 73 16 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRR
45 57 A S H <5S- 0 0 46 73 48 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSKTTT
46 58 A A T <5S+ 0 0 66 73 52 AAAAAAAAAAAAAAAAAAAAAAAAADAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGNNN
47 59 A M S S+ 0 0 83 67 28
4 16 A A H > S+ 0 0 43 67 0
5 17 A E H > S+ 0 0 86 68 7 E
6 18 A I H > S+ 0 0 88 68 0 I
7 19 A V H X S+ 0 0 33 69 5 VI
8 20 A C H X S+ 0 0 81 69 26 CN
9 21 A E H X S+ 0 0 122 69 47 AG
10 22 A A H X S+ 0 0 26 69 50 FI
11 23 A I H X S+ 0 0 12 73 27 LI
12 24 A K H < S+ 0 0 163 73 19 TN
13 25 A T H < S+ 0 0 111 73 73 SH
14 26 A I H < S- 0 0 57 73 31 LL
15 27 A G S < S+ 0 0 41 73 21 RS
16 28 A I S S+ 0 0 116 73 78 PI
17 29 A E S > S+ 0 0 123 73 36 ag
18 30 A G T 3 - 0 0 0 73 47 ts
19 31 A A E 3 +A 58 0A 5 73 62 IT
20 32 A T E <> -A 57 0A 22 73 49 QT
21 33 A A H > S+ 0 0 46 73 0 AA
22 34 A A H > S+ 0 0 46 73 95 KL
23 35 A Q H >> S+ 0 0 56 73 49 VQ
24 36 A L H 3X S+ 0 0 20 73 5 LI
25 37 A T H 3< S+ 0 0 13 73 51 GS
26 38 A R H << S+ 0 0 196 73 21 RK
27 39 A Q H < S+ 0 0 115 73 48 KD
28 40 A L S < S- 0 0 58 73 0 LL
29 41 A N S S- 0 0 133 73 28 GG
30 42 A M S S+ 0 0 140 73 20 LI
31 43 A E >> + 0 0 100 73 61 PG
32 44 A K H 3> + 0 0 105 73 0 KK
33 45 A R H 3> S+ 0 0 214 73 48 RS
34 46 A E H <> S+ 0 0 122 73 66 IT
35 47 A V H X S+ 0 0 10 73 0 VV
36 48 A N H X S+ 0 0 92 73 0 NN
37 49 A K H X S+ 0 0 145 73 8 KK
38 50 A A H X S+ 0 0 31 73 25 VY
39 51 A L H X S+ 0 0 21 73 0 LL
40 52 A Y H X S+ 0 0 113 73 0 YY
41 53 A D H X S+ 0 0 99 73 47 DK
42 54 A L H X>S+ 0 0 30 73 0 LL
43 55 A Q H <5S+ 0 0 66 73 65 LH
44 56 A R H <5S+ 0 0 179 73 16 KK
45 57 A S H <5S- 0 0 46 73 48 SD
46 58 A A T <5S+ 0 0 66 73 52 NG
47 59 A M S