Complet list of 1nkl hssp file
Complete list of 1nkl.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1NKL
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-04
HEADER SAPOSIN FOLD 17-APR-97 1NKL
COMPND MOL_ID: 1; MOLECULE: NK-LYSIN; CHAIN: A; OTHER_DETAILS: ACTIVE BY MEMB
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SUS SCROFA; ORGANISM_COMMON: PIG; ORGA
AUTHOR G.OTTING,E.LIEPINSH
DBREF 1NKL A 1 78 UNP Q29075 NKL_PIG 47 124
SEQLENGTH 78
NCHAIN 1 chain(s) in 1NKL data set
NALIGN 44
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F1SVC1_PIG 0.91 0.97 1 78 63 140 78 0 0 146 F1SVC1 Uncharacterized protein OS=Sus scrofa GN=GNLY PE=4 SV=2
2 : M9TM62_PIG 0.91 0.97 1 78 63 140 78 0 0 145 M9TM62 Antimicrobial peptide NK-lysin OS=Sus scrofa GN=NKL PE=2 SV=1
3 : NKL_PIG 0.91 0.97 1 78 47 124 78 0 0 129 Q29075 Antimicrobial peptide NK-lysin (Fragment) OS=Sus scrofa GN=NKL PE=1 SV=1
4 : F6VY56_HORSE 0.68 0.85 1 78 75 152 78 0 0 157 F6VY56 Antimicrobial peptide NK-lysin OS=Equus caballus GN=NKL PE=4 SV=1
5 : L5K7K2_PTEAL 0.68 0.86 4 77 5 78 74 0 0 79 L5K7K2 Antimicrobial peptide NK-lysin OS=Pteropus alecto GN=PAL_GLEAN10005187 PE=4 SV=1
6 : NKL_HORSE 0.68 0.85 1 78 63 140 78 0 0 145 Q8HZQ3 Antimicrobial peptide NK-lysin OS=Equus caballus GN=NKL PE=2 SV=3
7 : A6YT17_SHEEP 0.66 0.84 1 77 63 139 77 0 0 146 A6YT17 Granulysin OS=Ovis aries GN=GNLY PE=2 SV=1
8 : L8YDF1_TUPCH 0.66 0.92 4 77 66 139 74 0 0 148 L8YDF1 Antimicrobial peptide NK-lysin OS=Tupaia chinensis GN=TREES_T100011238 PE=4 SV=1
9 : W5NVE7_SHEEP 0.66 0.84 1 77 63 139 77 0 0 146 W5NVE7 Uncharacterized protein (Fragment) OS=Ovis aries PE=4 SV=1
10 : S9Y3Q0_9CETA 0.62 0.83 1 77 113 189 77 0 0 441 S9Y3Q0 Uncharacterized protein OS=Camelus ferus GN=CB1_000688067 PE=4 SV=1
11 : S7NRQ1_MYOBR 0.60 0.78 1 77 63 140 78 1 1 181 S7NRQ1 Antimicrobial peptide NK-lysin OS=Myotis brandtii GN=D623_10004597 PE=4 SV=1
12 : G1NVX6_MYOLU 0.59 0.78 1 77 63 140 78 1 1 147 G1NVX6 Uncharacterized protein OS=Myotis lucifugus GN=GNLY PE=4 SV=1
13 : Q24JZ1_BOVIN 0.57 0.79 1 77 63 139 77 0 0 146 Q24JZ1 Granulysin OS=Bos taurus GN=GNLY PE=2 SV=1
14 : Q864L6_BOVIN 0.57 0.79 1 77 15 91 77 0 0 98 Q864L6 Granulysin/NK-lysin-like protein (Fragment) OS=Bos taurus PE=2 SV=1
15 : A7XWQ6_BUBBU 0.56 0.81 1 77 2 78 77 0 0 85 A7XWQ6 Granulysin (Fragment) OS=Bubalus bubalis PE=2 SV=2
16 : F1MB18_BOVIN 0.55 0.78 1 77 11 87 77 0 0 94 F1MB18 Uncharacterized protein (Fragment) OS=Bos taurus PE=4 SV=2
17 : Q864L7_BOVIN 0.55 0.78 1 77 15 91 77 0 0 98 Q864L7 Granulysin/NK-lysin-like protein (Fragment) OS=Bos taurus PE=2 SV=1
18 : W5QH94_SHEEP 0.54 0.78 4 77 66 139 74 0 0 146 W5QH94 Uncharacterized protein OS=Ovis aries GN=LOC101104728 PE=4 SV=1
19 : W5QH95_SHEEP 0.54 0.78 4 77 66 139 74 0 0 162 W5QH95 Uncharacterized protein OS=Ovis aries GN=LOC101104728 PE=4 SV=1
20 : Q24JZ2_BOVIN 0.52 0.77 1 77 63 139 77 0 0 146 Q24JZ2 Granulysin OS=Bos taurus GN=GNLY PE=2 SV=1
21 : G3MZD7_BOVIN 0.51 0.77 1 77 63 139 77 0 0 146 G3MZD7 Uncharacterized protein OS=Bos taurus GN=LOC100850470 PE=4 SV=1
22 : K0BZX8_SHEEP 0.51 0.77 1 77 63 139 77 0 0 146 K0BZX8 Nk-lysin OS=Ovis aries PE=2 SV=1
23 : F1N0K5_BOVIN 0.47 0.74 4 77 63 136 74 0 0 142 F1N0K5 Uncharacterized protein OS=Bos taurus GN=LOC616323 PE=4 SV=1
24 : Q29RG7_BOVIN 0.47 0.74 4 77 66 139 74 0 0 145 Q29RG7 Similar to granulysin isoform NKG5 OS=Bos taurus GN=LOC616323 PE=2 SV=1
25 : L8ISG9_9CETA 0.46 0.74 4 77 66 139 74 0 0 143 L8ISG9 Antimicrobial peptide NK-lysin (Fragment) OS=Bos mutus GN=M91_17779 PE=4 SV=1
26 : F7F5X3_ORNAN 0.37 0.65 2 78 17 95 79 2 2 101 F7F5X3 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus PE=4 SV=1
27 : F7GSZ2_CALJA 0.35 0.63 1 77 63 140 78 1 1 146 F7GSZ2 Uncharacterized protein OS=Callithrix jacchus GN=GNLY PE=4 SV=1
28 : H2P5L6_PONAB 0.35 0.65 4 77 66 139 75 2 2 145 H2P5L6 Uncharacterized protein OS=Pongo abelii GN=GNLY PE=4 SV=1
29 : H2QIA0_PANTR 0.35 0.70 7 76 69 139 71 1 1 144 H2QIA0 Uncharacterized protein OS=Pan troglodytes GN=GNLY PE=4 SV=1
30 : H9YYG7_MACMU 0.35 0.66 1 76 63 138 77 2 2 145 H9YYG7 Granulysin isoform NKG5 OS=Macaca mulatta GN=GNLY PE=2 SV=1
31 : B4NH07_DROWI 0.34 0.61 4 76 652 725 74 1 1 935 B4NH07 GK13103 OS=Drosophila willistoni GN=Dwil\GK13103 PE=4 SV=1
32 : G3QRT3_GORGO 0.34 0.70 7 76 69 139 71 1 1 146 G3QRT3 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101126114 PE=4 SV=1
33 : G3RT35_GORGO 0.34 0.70 7 76 69 139 71 1 1 147 G3RT35 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101126114 PE=4 SV=1
34 : M3ZBM5_NOMLE 0.34 0.69 4 76 66 138 74 2 2 145 M3ZBM5 Uncharacterized protein OS=Nomascus leucogenys GN=GNLY PE=4 SV=1
35 : B4E3H9_HUMAN 0.32 0.68 7 76 96 165 71 2 2 172 B4E3H9 Granulysin OS=Homo sapiens GN=GNLY PE=2 SV=1
36 : GNLY_HUMAN 0.32 0.68 7 76 69 138 71 2 2 145 P22749 Granulysin OS=Homo sapiens GN=GNLY PE=1 SV=3
37 : H0YDW8_HUMAN 0.32 0.68 7 76 36 105 71 2 2 187 H0YDW8 Granulysin (Fragment) OS=Homo sapiens GN=GNLY PE=4 SV=1
38 : K7BYN6_PANTR 0.32 0.70 7 76 69 139 71 1 1 146 K7BYN6 Granulysin OS=Pan troglodytes GN=GNLY PE=2 SV=1
39 : Q285P0_ICTPU 0.32 0.62 4 76 57 129 73 0 0 129 Q285P0 NK-lysin type 2 OS=Ictalurus punctatus PE=4 SV=1
40 : Q285P2_ICTPU 0.32 0.62 4 76 57 129 73 0 0 129 Q285P2 NK-lysin type 2 OS=Ictalurus punctatus PE=2 SV=1
41 : B4GNA3_DROPE 0.31 0.57 4 76 678 751 74 1 1 1005 B4GNA3 GL13982 OS=Drosophila persimilis GN=Dper\GL13982 PE=4 SV=1
42 : Q29CC4_DROPS 0.31 0.57 4 76 665 738 74 1 1 956 Q29CC4 GA11373 OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA11373 PE=4 SV=2
43 : Q2VQN9_ICTPU 0.31 0.59 4 77 57 130 74 0 0 148 Q2VQN9 NK-lysin type 1 OS=Ictalurus punctatus PE=2 SV=1
44 : W5L6K4_ASTMX 0.31 0.56 4 77 318 392 75 1 1 528 W5L6K4 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
## ALIGNMENTS 1 - 44
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 75 21 14 GGGG GG GGGGSSSGG GGG G G
2 2 A Y >> + 0 0 151 22 31 LLLI IL LFVILLLLL LLL VF F
3 3 A F H 3> S+ 0 0 96 22 87 IIIA AL LITTRRLLL LLL TR D
4 4 A a H 3> S+ 0 0 36 38 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCC CC C CCCCCC
5 5 A E H <> S+ 0 0 66 38 96 EEEWWWGKGHRRGGDGGDDGGGGGGSKR KL R WWLLWA
6 6 A S H X S+ 0 0 0 38 79 SSSSSSPPPSLLSSRSSLLPPPPPPSTT IL T AAIIAI
7 7 A b H X S+ 0 0 2 45 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A R H X S+ 0 0 142 45 82 RRRRTRRQRQKQRRQQQQQQWWQQQQLLLLKLLLLLLLKKEEQE
9 9 A K H X S+ 0 0 111 45 82 KKKKKKKKKMGWRRKRREEMMMKKKIRSMRETTRTTTMWWEEWY
10 10 A I H X S+ 0 0 1 45 28 IIIIIIIIILIIIIIIIIIIIIIIIIMIIILIIIIIIIAALLAV
11 11 A I H X S+ 0 0 3 45 35 IIILILIMIIIIIIIIIMMMMMMMMMIVIIIVVVVVVVMMVVMM
12 12 A Q H X S+ 0 0 62 45 29 QQQQQQKQKQQQQQQQQQQQQQQQQQQQQQKQQQQQQQNNKKKK
13 13 A K H X S+ 0 0 62 45 76 KKKKKKSKSKQKHHHHHMMHHHMMMKATRTEKKAKKKRNNTTKE
14 14 A L H X S+ 0 0 0 45 13 LLLLLLLLLVLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVVVVL
15 15 A E H X S+ 0 0 40 45 64 EEEEEEEEEELMMMMMMEEMMMKKKKKKKKEKKKKKKKKKEEKE
16 16 A D H < S+ 0 0 116 45 65 DDDDKDDDDDDNDDDDDYYDDDYYYDDADAKNNEKKKDKKKKKD
17 17 A M H < S+ 0 0 60 45 53 MMMLMLMMMLMMKKKKKMMKKKMMMMMMMMKMMMMMMVHHKKQM
18 18 A V H < S- 0 0 24 45 26 VVVVVVVVVVVVLLLLLVVLLLVVVVVVVVLLLVVVVVLLMMLI
19 19 A G < - 0 0 28 45 36 GGGGGGGGGGGGGGGGGGGGGGGGGGKNENGDDKDDDEGGGGGQ
20 20 A P S S+ 0 0 106 45 64 PPPEKEDEDQEEDDDDDNNDDDNNNNEQDEPDDQKKKDIIKKND
21 21 A Q S S+ 0 0 178 45 55 QQQQQQQQQQDQQQQQQKKQQQRRRnPPQPKQQPPPPQNNHHNQ
22 22 A P - 0 0 27 39 15 PPPPPPPPPPPPPPPPPPPPPPPPPkT.P.PPP....PPPPPPT
23 23 A N > - 0 0 86 45 64 NNNNDNNNNTDDDDDDDSSDDDSSSDKTTTNTTTTTTTTTTTTT
24 24 A E H > S+ 0 0 77 45 60 EEEEKEEEEQEEEEEEEKKEEEKKKMEQQQKQQEQQQQVVKKVE
25 25 A D H > S+ 0 0 88 45 65 DDDADADEDDDDNNNNNNNNNNNNNEARRRAKKKRRRRDDDDDE
26 26 A T H > S+ 0 0 52 45 72 TTTTSTTTTTTTTTTTTVVTTTVVVAINSSDSSSSSSSMMSSIE
27 27 A V H X S+ 0 0 1 45 19 VVVIIIIIIIIIVVVVVIIVVVIIIISVVIIVVVVVVVIIIIIV
28 28 A T H X S+ 0 0 47 45 87 TTTNANRARAAAIIIIIIIIIIIIIKDSSSESSSSSSSKKKKKM
29 29 A Q H X S+ 0 0 108 45 66 QQQEQEEQEQQQEEEEERREEEHHRRANNNKNNKNNNNAAQQAQ
30 30 A A H X S+ 0 0 15 45 38 AAAAAAAAAAAAEEAAAAAAVVVVVAAAAAEAAAAAAAQQAAQA
31 31 A A H X S+ 0 0 2 45 58 AAAAAAAAAAAVAAAAATTAAATTTEEAAELAAAAAAALLLLLV
32 32 A S H X S+ 0 0 36 45 57 SSSSSSSSSSSSSSSSSSSSSSSSSNTTTASTTTTTTTAAEEKE
33 33 A Q H X S+ 0 0 87 45 51 RRRRRRKKKQRRKKKKKKKKKKKNKQQRRRQWWRRRRREEQQKK
34 34 A V H X S+ 0 0 0 45 25 VVVVVVVVVVVVVVVVVVVVMMVVVLLVMVVVVVVVVMVVSSVV
35 35 A c H < S+ 0 0 0 45 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
36 36 A D H < S+ 0 0 43 45 73 DDDRSRSGSRSSSSSGGRRGSSSSSKRRRRDRRKRRRRNNDDNN
37 37 A K H < S+ 0 0 142 45 60 KKKNKNKKKKKKKKKKKKKKKKKKKFRTTMKMMKTTTTSSKKSI
38 38 A L S < S- 0 0 30 45 63 MMMLMLMMMFVVMMMMMMMMMMMMMVMGGVLGGQGGGGIILLIL
39 39 A K + 0 0 176 45 68 KKKGRGKGKKKKRRGGGGGGRRGGGSKRRKKRRRRRRRGGKKGP
40 40 A I S > S+ 0 0 168 45 88 IIILLLLLLRggLLLPPLLPLLLLLfpsssksssssssFFkkFs
41 41 A L T 3> S+ 0 0 23 45 46 LLLLLLLLLLllLLLLLLLLLLWWWlwwwwawwwwwwwLLvvLl
42 42 A R H 3> S+ 0 0 111 45 48 RRRRTRKRKRRRKKKKKRRKKKSSSRRRRRSRRRRRRRRRAART
43 43 A G H <> S+ 0 0 51 45 64 GGGGGGRGRGGGGGGGGRRGGGIIIKDDDDHDDDDDDDGGSSGA
44 44 A L H > S+ 0 0 47 45 66 VVVALAPIPLLLLLLLLRRLLLLLLSFVVVQVVVVVVVLLKKLQ
45 45 A c H X S+ 0 0 0 45 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
46 46 A K H X S+ 0 0 70 45 47 KKKKKKQKQKKKKKKKKNNKKKNNNQQKRKHRRKRRRRKKHHKK
47 47 A K H X S+ 0 0 161 45 72 KKKKKKSRSMRRSSSSSKKSSSQQQTKNNNKNNHNNNNTTKKKD
48 48 A I H X S+ 0 0 18 45 44 IIIIIIIIIITTIIIIIIIIIIMMMLAFFFIFFFFFFFIILLML
49 49 A M H X S+ 0 0 4 45 42 MMMMMMMMMTMMMMMTTMMTTTMMMMIMMMVMMIMMMMIIIIII
50 50 A R H < S+ 0 0 208 45 58 RRRRKRKRKKRRKKKKKKKKKKKKKLSRRRDRRTRRRRNNDDNE
51 51 A S H < S+ 0 0 77 45 53 TTTTTTKTKLKKKKRRRKKRRRKKKKRKRRKRRTRRRRKKKKKT
52 52 A F H X S+ 0 0 67 45 23 FFFCFCFFFASSFFFFFFFFFFYYYYYYYYYYYYYYYYYYFFYY
53 53 A L H X S+ 0 0 52 45 65 LLLLLLLLLLLLLLLLLLLLLLLLLLLQQQGQQQQQQQLLGGLG
54 54 A R H > S+ 0 0 127 45 77 RRRRRRRRRNQRRRRRRHHRRRNNNLPPSPDPPPSSSSDDDDDQ
55 55 A R H > S+ 0 0 120 45 59 RRRLRLRLRRRRTTRRRRRRRRRRHPCRRRKRRRRRRRTTQQTA
56 56 A I H X S+ 0 0 2 45 17 IIIIIIIIIIIIIIIIIIIIIIIIIIIVVVIVVVVVVVLLIILI
57 57 A S H X S+ 0 0 1 45 65 SSSSSSTSTSSSAAAAASSAAASSSATTTTATTTTTTTVVAAVI
58 58 A W H X S+ 0 0 60 45 71 KKKRKREREQKKEEAAAAAAAAKKKIKQQQDQQQQQQQEEDDEE
59 59 A D H <>S+ 0 0 0 45 55 DDDDDDDDDDDDDDDDDDDDDDDDDAGGGGLGGGGGGGEELLEL
60 60 A I H ><5S+ 0 0 13 45 27 IIIIIIIIIIIIIIIIIIIIIIIIIVILLLLLLLLLLLLLLLLL
61 61 A L H 3<5S+ 0 0 60 45 66 LLLLMLKMKIMMVVTTTIITTTMMMRMVVLIVVVVVVVSSLLSV
62 62 A T T 3<5S- 0 0 84 45 39 TTTAAAAAAAAAAAAAAAAAAAAAALAAAAAAAAAAAATTKKTQ
63 63 A G T < 5 + 0 0 38 45 50 GGGGGGGGGGGGGGGGGRRGGGRRRGRGGGAGGGGGGGTTEETE
64 64 A K < - 0 0 49 45 54 KKKKKKKKKKKKKKKKKKKKKKKKKKEEEEEEEKEEEEDDMMDA
65 65 A K > - 0 0 111 45 62 KKKKTKKSKKGGTTTTTKKTTTTTTSNTTTDTTTTTTTNNDDDD
66 66 A P H > S+ 0 0 12 45 49 PPPPPPPAPPAASSSSSPPSSSPPPPTAAAPAAAAAAAPPPPPP
67 67 A Q H > S+ 0 0 126 45 56 QQQQNQQQQRLHQQRRRQQRRRQQQRKQQQKQQKQQQQTTKKTK
68 68 A A H > S+ 0 0 33 45 83 AAAEEEAEAEEEVVVVVAAVVVAAADEEQKYQQEQQQQTTLLTT
69 69 A I H X S+ 0 0 0 45 8 IIIVIVIVIIIVIIVVVIIVIIIIIVIIIIIIIIIIIIIIIIII
70 70 A b H <>S+ 0 0 0 45 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
71 71 A V H ><5S+ 0 0 38 45 60 VVVVVVVVVVVVVVVEEVVEEEVVVVVVEVLEEVEEEEVVAAGT
72 72 A D H 3<5S+ 0 0 62 45 22 DDDDDDDDDDDDDDDDDDDDDDDDDGDDDDEDDDDDDDNNEENV
73 73 A I T 3<5S- 0 0 16 45 26 IIIIIIILILIIIIIIIIIIIIIIIIILLLLLLLLLLLIILLLL
74 74 A K T < 5S+ 0 0 139 45 61 KKKKKKKKKKRRKKKKKMMKKKKKKKRRRRGRRERRRRGGGGGG
75 75 A I < + 0 0 11 45 30 IIILMLVIVKIMMMMMMLLMMMLLLFMLLLFLLLLLLLIILLIL
76 76 A a S S- 0 0 18 45 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
77 77 A K 0 0 149 31 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKK KK
78 78 A E 0 0 123 7 66 EEEH H N
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 86 0 0 14 0 0 0 0 0 0 0 0 0 21 0 0 0.410 13 0.85
2 2 A 9 59 14 0 14 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 1.213 40 0.68
3 3 A 0 36 18 0 5 0 0 0 9 0 0 14 0 0 14 0 0 0 0 5 22 0 0 1.720 57 0.13
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
5 5 A 0 8 0 0 0 16 0 32 3 0 3 0 0 3 11 8 0 11 0 8 38 0 0 2.018 67 0.04
6 6 A 0 13 11 0 0 0 0 0 8 24 34 8 0 0 3 0 0 0 0 0 38 0 0 1.709 57 0.20
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
8 8 A 0 24 0 0 0 4 0 0 0 0 0 2 0 0 22 9 31 7 0 0 45 0 0 1.661 55 0.17
9 9 A 0 0 2 13 0 9 2 2 0 0 2 11 0 0 16 31 0 11 0 0 45 0 0 1.963 65 0.18
10 10 A 2 9 80 2 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.743 24 0.71
11 11 A 22 4 42 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 1.200 40 0.65
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 80 0 4 0 45 0 0 0.606 20 0.70
13 13 A 0 0 0 11 0 0 0 0 4 0 4 9 0 18 4 38 2 4 4 0 45 0 0 1.911 63 0.23
14 14 A 13 87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.393 13 0.86
15 15 A 0 2 0 20 0 0 0 0 0 0 0 0 0 0 0 40 0 38 0 0 45 0 0 1.141 38 0.35
16 16 A 0 0 0 0 0 0 11 0 4 0 0 0 0 0 0 22 0 2 7 53 45 0 0 1.317 43 0.35
17 17 A 2 7 0 60 0 0 0 0 0 0 0 0 0 4 0 24 2 0 0 0 45 0 0 1.139 38 0.47
18 18 A 62 31 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.881 29 0.74
19 19 A 0 0 0 0 0 0 0 73 0 0 0 0 0 0 0 4 2 4 4 11 45 0 0 0.971 32 0.64
20 20 A 0 0 4 0 0 0 0 0 0 11 0 0 0 0 0 13 7 16 16 33 45 0 0 1.777 59 0.36
21 21 A 0 0 0 0 0 0 0 0 0 16 0 0 0 4 7 7 56 0 9 2 45 6 1 1.415 47 0.44
22 22 A 0 0 0 0 0 0 0 0 0 92 0 5 0 0 0 3 0 0 0 0 39 0 0 0.320 10 0.85
23 23 A 0 0 0 0 0 0 0 0 0 0 11 38 0 0 0 2 0 0 22 27 45 0 0 1.383 46 0.35
24 24 A 7 0 0 2 0 0 0 0 0 0 0 0 0 0 0 20 22 49 0 0 45 0 0 1.271 42 0.39
25 25 A 0 0 0 0 0 0 0 0 9 0 0 0 0 0 16 7 0 7 29 33 45 0 0 1.591 53 0.34
26 26 A 11 0 4 4 0 0 0 0 2 0 27 44 0 0 0 0 0 2 2 2 45 0 0 1.572 52 0.27
27 27 A 49 0 49 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 45 0 0 0.784 26 0.81
28 28 A 0 0 29 2 0 0 0 0 11 0 22 9 0 0 4 13 0 2 4 2 45 0 0 1.951 65 0.13
29 29 A 0 0 0 0 0 0 0 0 9 0 0 0 0 4 9 4 27 27 20 0 45 0 0 1.734 57 0.33
30 30 A 11 0 0 0 0 0 0 0 76 0 0 0 0 0 0 0 7 7 0 0 45 0 0 0.817 27 0.61
31 31 A 4 13 0 0 0 0 0 0 64 0 0 11 0 0 0 0 0 7 0 0 45 0 0 1.115 37 0.41
32 32 A 0 0 0 0 0 0 0 0 7 0 60 22 0 0 0 2 0 7 2 0 45 0 0 1.171 39 0.42
33 33 A 0 0 0 0 0 4 0 0 0 0 0 0 0 0 36 38 16 4 2 0 45 0 0 1.386 46 0.48
34 34 A 82 4 0 9 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 45 0 0 0.653 21 0.75
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
36 36 A 0 0 0 0 0 0 0 9 0 0 29 0 0 0 33 4 0 0 9 16 45 0 0 1.583 52 0.27
37 37 A 0 0 2 7 2 0 0 0 0 0 7 13 0 0 2 62 0 0 4 0 45 0 0 1.317 43 0.39
38 38 A 9 16 7 47 2 0 0 18 0 0 0 0 0 0 0 0 2 0 0 0 45 0 0 1.517 50 0.37
39 39 A 0 0 0 0 0 0 0 33 0 2 2 0 0 0 31 31 0 0 0 0 45 0 0 1.262 42 0.31
40 40 A 0 36 9 0 9 0 0 4 0 9 24 0 0 0 2 7 0 0 0 0 45 0 18 1.761 58 0.12
41 41 A 4 62 0 0 0 31 0 0 2 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.881 29 0.54
42 42 A 0 0 0 0 0 0 0 0 4 0 9 4 0 0 60 22 0 0 0 0 45 0 0 1.133 37 0.51
43 43 A 0 0 7 0 0 0 0 49 2 0 4 0 0 2 9 2 0 0 0 24 45 0 0 1.482 49 0.36
44 44 A 29 42 2 0 2 0 0 0 4 4 2 0 0 0 4 4 4 0 0 0 45 0 0 1.668 55 0.33
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 7 16 58 9 0 11 0 45 0 0 1.246 41 0.52
47 47 A 0 0 0 2 0 0 0 0 0 0 22 7 0 2 7 31 7 0 20 2 45 0 0 1.815 60 0.27
48 48 A 0 9 53 9 22 0 0 0 2 0 0 4 0 0 0 0 0 0 0 0 45 0 0 1.323 44 0.55
49 49 A 2 0 18 67 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 45 0 0 0.931 31 0.57
50 50 A 0 2 0 0 0 0 0 0 0 0 2 2 0 0 40 38 0 2 7 7 45 0 0 1.434 47 0.42
51 51 A 0 2 0 0 0 0 0 0 0 0 2 20 0 0 33 42 0 0 0 0 45 0 0 1.221 40 0.47
52 52 A 0 0 0 0 44 0 44 0 2 0 4 0 4 0 0 0 0 0 0 0 45 0 0 1.082 36 0.77
53 53 A 0 69 0 0 0 0 0 9 0 0 0 0 0 0 0 0 22 0 0 0 45 0 0 0.806 26 0.34
54 54 A 0 2 0 0 0 0 0 0 0 13 11 0 0 4 42 0 4 0 9 13 45 0 0 1.722 57 0.23
55 55 A 0 7 0 0 0 0 0 0 2 2 0 11 2 2 67 2 4 0 0 0 45 0 0 1.256 41 0.40
56 56 A 22 7 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.757 25 0.82
57 57 A 7 0 2 0 0 0 0 0 27 0 36 29 0 0 0 0 0 0 0 0 45 0 0 1.344 44 0.35
58 58 A 0 0 2 0 0 2 0 0 18 0 0 0 0 0 7 22 24 18 0 7 45 0 0 1.823 60 0.28
59 59 A 0 9 0 0 0 0 0 24 2 0 0 0 0 0 0 0 0 7 0 58 45 0 0 1.142 38 0.44
60 60 A 2 38 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.759 25 0.72
61 61 A 27 20 9 18 0 0 0 0 0 0 7 13 0 0 2 4 0 0 0 0 45 0 0 1.869 62 0.33
62 62 A 0 2 0 0 0 0 0 0 76 0 0 16 0 0 0 4 2 0 0 0 45 0 0 0.809 26 0.61
63 63 A 0 0 0 0 0 0 0 71 2 0 0 7 0 0 13 0 0 7 0 0 45 0 0 0.957 31 0.50
64 64 A 0 0 0 4 0 0 0 0 2 0 0 0 0 0 0 62 0 24 0 7 45 0 0 1.043 34 0.45
65 65 A 0 0 0 0 0 0 0 4 0 0 4 49 0 0 0 24 0 0 7 11 45 0 0 1.396 46 0.37
66 66 A 0 0 0 0 0 0 0 0 29 51 18 2 0 0 0 0 0 0 0 0 45 0 0 1.093 36 0.51
67 67 A 0 2 0 0 0 0 0 0 0 0 0 7 0 2 18 13 56 0 2 0 45 0 0 1.337 44 0.43
68 68 A 18 4 0 0 0 0 2 0 24 0 0 9 0 0 0 2 16 22 0 2 45 0 0 1.882 62 0.17
69 69 A 20 0 80 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.500 16 0.91
70 70 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
71 71 A 62 2 0 0 0 0 0 2 4 0 0 2 0 0 0 0 0 27 0 0 45 0 0 1.040 34 0.39
72 72 A 2 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 7 7 82 45 0 0 0.691 23 0.78
73 73 A 0 38 62 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.663 22 0.74
74 74 A 0 0 0 4 0 0 0 16 0 0 0 0 0 0 27 51 0 2 0 0 45 0 0 1.208 40 0.38
75 75 A 4 44 20 24 4 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 45 0 0 1.388 46 0.69
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
77 77 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 31 0 0 0.000 0 1.00
78 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0 57 14 0 7 0 0 0.956 31 0.34
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
11 41 103 1 gFl
12 41 103 1 gFl
26 21 37 1 nTk
26 40 57 1 fIl
27 41 103 1 pRw
28 37 102 1 sRw
29 35 103 1 sQw
30 40 102 1 sQw
31 38 689 1 kAa
32 35 103 1 sRw
33 35 103 1 sRw
34 37 102 1 sRw
35 34 129 1 sRw
36 34 102 1 sRw
37 34 69 1 sRw
38 35 103 1 sQw
41 38 715 1 kPv
42 38 702 1 kPv
44 38 355 1 sTl
//