Complet list of 1nj3 hssp file
Complete list of 1nj3.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1NJ3
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-04
HEADER PROTEIN BINDING 30-DEC-02 1NJ3
COMPND MOL_ID: 1; MOLECULE: NPL4; CHAIN: A; FRAGMENT: NZF DOMAIN; ENGINEERED:
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; ORGANISM_COMMON: NO
AUTHOR B.WANG,S.L.ALAM,H.H.MEYER,M.PAYNE,T.L.STEMMLER,D.R.DAVIS, W.I.SUNDQUIS
DBREF 1NJ3 A 3 31 UNP Q9ES54 NPL4_RAT 580 608
SEQLENGTH 31
NCHAIN 1 chain(s) in 1NJ3 data set
NALIGN 148
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F1LQX9_RAT 0.94 1.00 1 31 578 608 31 0 0 608 F1LQX9 Nuclear protein localization protein 4 homolog OS=Rattus norvegicus GN=Nploc4 PE=4 SV=2
2 : I3MYM8_SPETR 0.94 1.00 1 31 205 235 31 0 0 235 I3MYM8 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus PE=4 SV=1
3 : NPL4_MOUSE 0.94 1.00 1 31 578 608 31 0 0 608 P60670 Nuclear protein localization protein 4 homolog OS=Mus musculus GN=Nploc4 PE=1 SV=3
4 : NPL4_RAT 0.94 1.00 1 31 578 608 31 0 0 608 Q9ES54 Nuclear protein localization protein 4 homolog OS=Rattus norvegicus GN=Nploc4 PE=1 SV=3
5 : Q3UDU9_MOUSE 0.94 1.00 1 31 578 608 31 0 0 608 Q3UDU9 Putative uncharacterized protein OS=Mus musculus GN=Nploc4 PE=2 SV=1
6 : Q3UE06_MOUSE 0.94 1.00 1 31 578 608 31 0 0 608 Q3UE06 Putative uncharacterized protein OS=Mus musculus GN=Nploc4 PE=2 SV=1
7 : H0XCQ9_OTOGA 0.93 1.00 2 31 577 606 30 0 0 606 H0XCQ9 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=NPLOC4 PE=4 SV=1
8 : F1N7U2_BOVIN 0.90 1.00 1 31 578 608 31 0 0 608 F1N7U2 Uncharacterized protein OS=Bos taurus GN=NPLOC4 PE=4 SV=2
9 : F1PNX1_CANFA 0.90 1.00 1 31 578 608 31 0 0 608 F1PNX1 Uncharacterized protein (Fragment) OS=Canis familiaris GN=NPLOC4 PE=4 SV=2
10 : F6SFE1_HORSE 0.90 1.00 1 31 578 608 31 0 0 608 F6SFE1 Uncharacterized protein (Fragment) OS=Equus caballus GN=NPLOC4 PE=4 SV=1
11 : F7GV67_MACMU 0.90 0.97 1 31 205 235 31 0 0 235 F7GV67 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=LOC713927 PE=4 SV=1
12 : F7IBF0_CALJA 0.90 0.97 1 31 578 608 31 0 0 608 F7IBF0 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=NPLOC4 PE=4 SV=1
13 : F7IBG3_CALJA 0.90 0.97 1 31 578 608 31 0 0 608 F7IBG3 Nuclear protein localization protein 4 homolog OS=Callithrix jacchus GN=NPLOC4 PE=2 SV=1
14 : G1RU45_NOMLE 0.90 0.97 1 31 577 607 31 0 0 607 G1RU45 Uncharacterized protein OS=Nomascus leucogenys GN=NPLOC4 PE=4 SV=1
15 : G3GX68_CRIGR 0.90 0.97 1 31 187 217 31 0 0 217 G3GX68 Nuclear protein localization protein 4-like OS=Cricetulus griseus GN=I79_002383 PE=4 SV=1
16 : G3SGZ9_GORGO 0.90 0.97 1 31 577 607 31 0 0 607 G3SGZ9 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101125065 PE=4 SV=1
17 : G5BFG0_HETGA 0.90 1.00 1 31 553 583 31 0 0 583 G5BFG0 Nuclear protein localization protein 4-like protein OS=Heterocephalus glaber GN=GW7_13462 PE=4 SV=1
18 : G7NH94_MACMU 0.90 0.97 1 31 599 629 31 0 0 629 G7NH94 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_09090 PE=4 SV=1
19 : G7PT43_MACFA 0.90 0.97 1 31 674 704 31 0 0 704 G7PT43 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_08267 PE=4 SV=1
20 : H2NV16_PONAB 0.90 1.00 1 31 577 607 31 0 0 607 H2NV16 Uncharacterized protein (Fragment) OS=Pongo abelii GN=NPLOC4 PE=4 SV=1
21 : H9FWY0_MACMU 0.90 0.97 1 31 578 608 31 0 0 608 H9FWY0 Nuclear protein localization protein 4 homolog OS=Macaca mulatta GN=NPLOC4 PE=2 SV=1
22 : J9NXM8_CANFA 0.90 1.00 1 31 490 520 31 0 0 520 J9NXM8 Uncharacterized protein OS=Canis familiaris GN=NPLOC4 PE=4 SV=1
23 : K7ADN8_PANTR 0.90 0.97 1 31 578 608 31 0 0 608 K7ADN8 Nuclear protein localization 4 homolog OS=Pan troglodytes GN=NPLOC4 PE=2 SV=1
24 : K7ETY3_PONAB 0.90 1.00 1 31 579 609 31 0 0 609 K7ETY3 Uncharacterized protein OS=Pongo abelii GN=NPLOC4 PE=4 SV=1
25 : L8I1A8_9CETA 0.90 1.00 1 31 573 603 31 0 0 603 L8I1A8 Uncharacterized protein (Fragment) OS=Bos mutus GN=M91_17353 PE=4 SV=1
26 : M3WHV8_FELCA 0.90 1.00 1 31 578 608 31 0 0 608 M3WHV8 Uncharacterized protein OS=Felis catus GN=NPLOC4 PE=4 SV=1
27 : NPL4_HUMAN 0.90 0.97 1 31 578 608 31 0 0 608 Q8TAT6 Nuclear protein localization protein 4 homolog OS=Homo sapiens GN=NPLOC4 PE=1 SV=3
28 : W5QAL9_SHEEP 0.90 1.00 1 31 578 608 31 0 0 608 W5QAL9 Uncharacterized protein (Fragment) OS=Ovis aries GN=NPLOC4 PE=4 SV=1
29 : G1MGU8_AILME 0.87 1.00 1 31 573 603 31 0 0 603 G1MGU8 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=NPLOC4 PE=4 SV=1
30 : H0VAW6_CAVPO 0.87 1.00 1 31 578 608 31 0 0 608 H0VAW6 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=NPLOC4 PE=4 SV=1
31 : I3L829_PIG 0.87 1.00 1 31 509 539 31 0 0 539 I3L829 Uncharacterized protein (Fragment) OS=Sus scrofa GN=NPLOC4 PE=4 SV=1
32 : K7FWN0_PELSI 0.87 0.97 1 31 507 537 31 0 0 537 K7FWN0 Uncharacterized protein OS=Pelodiscus sinensis GN=NPLOC4 PE=4 SV=1
33 : K7FWP9_PELSI 0.87 0.97 1 31 580 610 31 0 0 610 K7FWP9 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis GN=NPLOC4 PE=4 SV=1
34 : K9ITG1_DESRO 0.87 1.00 1 31 573 603 31 0 0 603 K9ITG1 Putative nuclear pore complex rnpl4 component sc npl4 (Fragment) OS=Desmodus rotundus PE=2 SV=1
35 : L5KN67_PTEAL 0.87 1.00 1 31 535 565 31 0 0 565 L5KN67 Nuclear protein localization protein 4 like protein OS=Pteropus alecto GN=PAL_GLEAN10014542 PE=4 SV=1
36 : M3YJ86_MUSPF 0.87 1.00 1 31 577 607 31 0 0 607 M3YJ86 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=NPLOC4 PE=4 SV=1
37 : U6D3M9_NEOVI 0.87 0.97 1 31 573 603 31 0 0 603 U6D3M9 Nuclear protein localization protein 4 homolog (Fragment) OS=Neovison vison GN=NPL4 PE=2 SV=1
38 : E1BZJ3_CHICK 0.84 0.97 1 31 579 609 31 0 0 609 E1BZJ3 Uncharacterized protein OS=Gallus gallus GN=NPLOC4 PE=4 SV=2
39 : G1KQR1_ANOCA 0.84 1.00 1 31 579 609 31 0 0 609 G1KQR1 Uncharacterized protein OS=Anolis carolinensis GN=NPLOC4 PE=4 SV=2
40 : G1N3T3_MELGA 0.84 0.97 1 31 579 609 31 0 0 609 G1N3T3 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=NPLOC4 PE=4 SV=1
41 : G1NT23_MYOLU 0.84 1.00 1 31 578 608 31 0 0 608 G1NT23 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=NPLOC4 PE=4 SV=1
42 : G3U4D3_LOXAF 0.84 0.97 1 31 579 609 31 0 0 609 G3U4D3 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=NPLOC4 PE=4 SV=1
43 : G3UDP2_LOXAF 0.84 0.97 1 31 579 609 31 0 0 609 G3UDP2 Uncharacterized protein OS=Loxodonta africana GN=NPLOC4 PE=4 SV=1
44 : J3S974_CROAD 0.84 0.97 1 31 579 609 31 0 0 609 J3S974 Nuclear protein localization protein 4-like protein OS=Crotalus adamanteus PE=2 SV=1
45 : S7NPA4_MYOBR 0.84 1.00 1 31 587 617 31 0 0 617 S7NPA4 Nuclear protein localization protein 4 like protein OS=Myotis brandtii GN=D623_10007362 PE=4 SV=1
46 : T1DM32_CROHD 0.84 1.00 1 31 579 609 31 0 0 609 T1DM32 Nuclear protein localization 4-like protein OS=Crotalus horridus PE=2 SV=1
47 : U3FWH2_MICFL 0.84 1.00 1 31 579 609 31 0 0 609 U3FWH2 Nuclear protein localization protein 4 OS=Micrurus fulvius PE=2 SV=1
48 : V8PHM1_OPHHA 0.84 1.00 1 31 564 594 31 0 0 594 V8PHM1 Nuclear protein localization protein 4-like protein (Fragment) OS=Ophiophagus hannah GN=NPLOC4 PE=4 SV=1
49 : G1SKM5_RABIT 0.81 0.94 1 31 578 608 31 0 0 608 G1SKM5 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=NPLOC4 PE=4 SV=1
50 : H2MFA4_ORYLA 0.81 0.94 1 31 571 601 31 0 0 601 H2MFA4 Uncharacterized protein OS=Oryzias latipes GN=LOC101163208 PE=4 SV=1
51 : H2SHH1_TAKRU 0.81 0.94 1 31 594 624 31 0 0 624 H2SHH1 Uncharacterized protein OS=Takifugu rubripes GN=LOC101075431 PE=4 SV=1
52 : H2SHH2_TAKRU 0.81 0.94 1 31 580 610 31 0 0 610 H2SHH2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101075431 PE=4 SV=1
53 : H3D2U9_TETNG 0.81 0.94 1 31 577 607 31 0 0 607 H3D2U9 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
54 : I3KNQ4_ORENI 0.81 0.94 1 31 594 624 31 0 0 624 I3KNQ4 Uncharacterized protein OS=Oreochromis niloticus GN=nploc4 PE=4 SV=1
55 : Q4S8H6_TETNG 0.81 0.94 1 31 554 584 31 0 0 584 Q4S8H6 Chromosome 2 SCAF14705, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00022333001 PE=4 SV=1
56 : S7QF65_MYOBR 0.81 1.00 1 31 187 217 31 0 0 217 S7QF65 Nuclear protein localization protein 4 like protein OS=Myotis brandtii GN=D623_10017343 PE=4 SV=1
57 : W5K0S2_ASTMX 0.81 0.94 1 31 564 594 31 0 0 594 W5K0S2 Uncharacterized protein (Fragment) OS=Astyanax mexicanus PE=4 SV=1
58 : L9KZ26_TUPCH 0.80 0.97 2 31 391 420 30 0 0 420 L9KZ26 Nuclear protein localization protein 4 like protein OS=Tupaia chinensis GN=TREES_T100007397 PE=4 SV=1
59 : Q7ZVI8_DANRE 0.80 0.93 2 31 595 624 30 0 0 624 Q7ZVI8 Nploc4 protein OS=Danio rerio GN=nploc4 PE=2 SV=1
60 : S9XGH8_9CETA 0.80 1.00 1 25 403 427 25 0 0 1296 S9XGH8 Fanconi anemia-associated protein-like protein OS=Camelus ferus GN=CB1_000088004 PE=4 SV=1
61 : G3PN45_GASAC 0.77 0.90 1 31 602 632 31 0 0 632 G3PN45 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
62 : G3PN48_GASAC 0.77 0.90 1 31 591 621 31 0 0 621 G3PN48 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
63 : M4AJF3_XIPMA 0.77 0.94 1 31 600 630 31 0 0 630 M4AJF3 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
64 : U3KDX6_FICAL 0.77 0.97 1 31 579 609 31 0 0 609 U3KDX6 Uncharacterized protein OS=Ficedula albicollis GN=NPLOC4 PE=4 SV=1
65 : W5N5X1_LEPOC 0.77 0.97 1 31 586 616 31 0 0 616 W5N5X1 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
66 : H3BGJ8_LATCH 0.73 0.97 2 31 583 612 30 0 0 612 H3BGJ8 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
67 : B5DFQ1_XENTR 0.71 0.94 1 31 580 610 31 0 0 610 B5DFQ1 Uncharacterized protein OS=Xenopus tropicalis GN=nploc4 PE=2 SV=1
68 : F7C8S1_XENTR 0.71 0.94 1 31 580 610 31 0 0 610 F7C8S1 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=nploc4 PE=4 SV=1
69 : F7DM09_XENTR 0.71 0.94 1 31 583 613 31 0 0 613 F7DM09 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=nploc4 PE=4 SV=1
70 : Q06EZ2_SQUMI 0.68 0.97 1 31 325 355 31 0 0 355 Q06EZ2 Nuclear protein localization 4 (Fragment) OS=Squalus mitsukurii GN=NPL4 PE=2 SV=1
71 : Q63ZR4_XENLA 0.68 0.94 1 31 580 610 31 0 0 610 Q63ZR4 LOC494816 protein OS=Xenopus laevis GN=LOC494816 PE=2 SV=1
72 : Q7SZT9_XENLA 0.68 0.94 1 31 580 610 31 0 0 610 Q7SZT9 Npl4 protein OS=Xenopus laevis GN=nploc4 PE=2 SV=1
73 : C4Q7T4_SCHMA 0.67 0.77 1 30 661 690 30 0 0 692 C4Q7T4 Nuclear protein localization, putative OS=Schistosoma mansoni GN=Smp_039180.1 PE=4 SV=1
74 : U6I2C7_HYMMI 0.62 0.79 7 30 614 637 24 0 0 639 U6I2C7 Nuclear protein localization protein 4 OS=Hymenolepis microstoma GN=HmN_000000300 PE=4 SV=1
75 : S4RQ99_PETMA 0.61 0.94 1 31 605 635 31 0 0 635 S4RQ99 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
76 : F6T141_XENTR 0.60 0.72 7 31 198 222 25 0 0 471 F6T141 Uncharacterized protein (Fragment) OS=Xenopus tropicalis PE=4 SV=1
77 : T1JQQ6_TETUR 0.60 0.76 6 30 496 520 25 0 0 523 T1JQQ6 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
78 : V4AI10_LOTGI 0.60 0.80 1 30 602 631 30 0 0 632 V4AI10 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_214584 PE=4 SV=1
79 : U6I3W4_ECHMU 0.59 0.76 2 30 628 656 29 0 0 659 U6I3W4 Nuclear protein localization protein 4 OS=Echinococcus multilocularis GN=EmuJ_001148600 PE=4 SV=1
80 : U6J9P5_ECHGR 0.59 0.76 2 30 628 656 29 0 0 659 U6J9P5 Nuclear protein localization protein 4 OS=Echinococcus granulosus GN=EgrG_001148600 PE=4 SV=1
81 : W6UKU0_ECHGR 0.59 0.76 2 30 628 656 29 0 0 659 W6UKU0 Nuclear protein localization protein OS=Echinococcus granulosus GN=EGR_06378 PE=4 SV=1
82 : B4GF64_DROPE 0.58 0.83 7 30 171 194 24 0 0 194 B4GF64 GL21677 OS=Drosophila persimilis GN=Dper\GL21677 PE=4 SV=1
83 : G1PEJ3_MYOLU 0.58 0.71 7 30 353 376 24 0 0 1071 G1PEJ3 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
84 : L5M2I0_MYODS 0.58 0.71 7 30 363 386 24 0 0 1083 L5M2I0 RING finger protein 31 OS=Myotis davidii GN=MDA_GLEAN10004097 PE=4 SV=1
85 : L8HHQ0_ACACA 0.58 0.79 7 30 238 261 24 0 0 263 L8HHQ0 Fbox domain containing protein OS=Acanthamoeba castellanii str. Neff GN=ACA1_173330 PE=4 SV=1
86 : S7P0X4_MYOBR 0.58 0.71 7 30 373 396 24 0 0 1119 S7P0X4 RING finger protein 31 OS=Myotis brandtii GN=D623_10003712 PE=4 SV=1
87 : U3JGB3_FICAL 0.58 0.71 7 30 14 37 24 0 0 72 U3JGB3 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=RBCK1 PE=4 SV=1
88 : V9K7Y6_CALMI 0.58 0.77 1 31 353 383 31 0 0 383 V9K7Y6 Nuclear protein localization protein 4-like protein OS=Callorhynchus milii PE=2 SV=1
89 : W4XKM7_STRPU 0.58 0.75 7 30 520 543 24 0 0 546 W4XKM7 Uncharacterized protein OS=Strongylocentrotus purpuratus GN=Sp-Tab2/3 PE=4 SV=1
90 : T1I1X9_RHOPR 0.57 0.77 1 30 611 640 30 0 0 640 T1I1X9 Uncharacterized protein OS=Rhodnius prolixus PE=4 SV=1
91 : C3YV25_BRAFL 0.56 0.68 7 31 185 209 25 0 0 498 C3YV25 Putative uncharacterized protein (Fragment) OS=Branchiostoma floridae GN=BRAFLDRAFT_230191 PE=4 SV=1
92 : F4R9S3_MELLP 0.56 0.74 3 29 670 696 27 0 0 698 F4R9S3 Putative uncharacterized protein OS=Melampsora larici-populina (strain 98AG31 / pathotype 3-4-7) GN=MELLADRAFT_42071 PE=4 SV=1
93 : F7ES70_MONDO 0.56 0.64 7 31 342 366 25 0 0 410 F7ES70 Uncharacterized protein OS=Monodelphis domestica GN=SHARPIN PE=4 SV=2
94 : H0WW90_OTOGA 0.56 0.64 7 31 347 371 25 0 0 382 H0WW90 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=SHARPIN PE=4 SV=1
95 : U5EVM2_9DIPT 0.56 0.67 5 31 610 636 27 0 0 636 U5EVM2 Putative nuclear pore complex rnpl4 component sc npl4 OS=Corethrella appendiculata PE=2 SV=1
96 : W5Q004_SHEEP 0.56 0.64 7 31 342 366 25 0 0 409 W5Q004 Uncharacterized protein OS=Ovis aries GN=SHARPIN PE=4 SV=1
97 : O01894_CAEEL 0.55 0.79 1 29 496 524 29 0 0 527 O01894 Protein NPL-4.2, isoform a OS=Caenorhabditis elegans GN=npl-4.2 PE=4 SV=1
98 : Q95QZ9_CAEEL 0.55 0.79 1 29 498 526 29 0 0 529 Q95QZ9 Protein NPL-4.2, isoform b OS=Caenorhabditis elegans GN=npl-4.2 PE=4 SV=1
99 : T1IW71_STRMM 0.55 0.79 3 31 582 610 29 0 0 612 T1IW71 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
100 : F6Z0X2_MONDO 0.54 0.71 7 30 361 384 24 0 0 1075 F6Z0X2 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
101 : G1SIH7_RABIT 0.54 0.71 7 30 346 369 24 0 0 999 G1SIH7 Uncharacterized protein OS=Oryctolagus cuniculus PE=4 SV=1
102 : H2WGV7_CAEJA 0.54 0.79 2 29 482 509 28 0 0 511 H2WGV7 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00134531 PE=4 SV=2
103 : K7E4N3_MONDO 0.54 0.71 7 30 361 384 24 0 0 933 K7E4N3 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
104 : K7IWZ8_NASVI 0.54 0.73 5 30 614 639 26 0 0 639 K7IWZ8 Uncharacterized protein OS=Nasonia vitripennis PE=4 SV=1
105 : U3IKS6_ANAPL 0.54 0.67 7 30 32 55 24 0 0 87 U3IKS6 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=RBCK1 PE=4 SV=1
106 : ZRAB3_MOUSE 0.54 0.65 6 31 620 645 26 0 0 1069 Q6NZP1 DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus GN=Zranb3 PE=1 SV=1
107 : K4BZ01_SOLLC 0.53 0.60 2 31 311 340 30 0 0 371 K4BZ01 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc05g016380.2 PE=4 SV=1
108 : A7SZA1_NEMVE 0.52 0.85 5 31 516 541 27 1 1 541 A7SZA1 Predicted protein OS=Nematostella vectensis GN=v1g175733 PE=4 SV=1
109 : A8X418_CAEBR 0.52 0.72 1 29 496 524 29 0 0 527 A8X418 Protein CBR-NPL-4.1 OS=Caenorhabditis briggsae GN=npl-4.1 PE=4 SV=1
110 : B3RMF9_TRIAD 0.52 0.76 3 31 578 606 29 0 0 606 B3RMF9 Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_63700 PE=4 SV=1
111 : C3YJD0_BRAFL 0.52 0.87 1 31 500 530 31 0 0 530 C3YJD0 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_126926 PE=4 SV=1
112 : D6WVG4_TRICA 0.52 0.81 1 31 161 191 31 0 0 194 D6WVG4 Putative uncharacterized protein OS=Tribolium castaneum GN=TcasGA2_TC005938 PE=4 SV=1
113 : E3MDH3_CAERE 0.52 0.76 1 29 492 520 29 0 0 523 E3MDH3 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_17909 PE=4 SV=1
114 : G0N4P7_CAEBE 0.52 0.72 1 29 493 521 29 0 0 524 G0N4P7 Putative uncharacterized protein OS=Caenorhabditis brenneri GN=CAEBREN_20908 PE=4 SV=1
115 : H2KYU6_CAEEL 0.52 0.76 1 29 498 526 29 0 0 529 H2KYU6 Protein NPL-4.1, isoform b OS=Caenorhabditis elegans GN=npl-4.1 PE=4 SV=1
116 : H9K283_APIME 0.52 0.81 5 31 611 637 27 0 0 638 H9K283 Uncharacterized protein OS=Apis mellifera PE=4 SV=1
117 : K5W9D5_AGABU 0.52 0.79 1 29 637 665 29 0 0 666 K5W9D5 Uncharacterized protein OS=Agaricus bisporus var. burnettii (strain JB137-S8 / ATCC MYA-4627 / FGSC 10392) GN=AGABI1DRAFT_116991 PE=4 SV=1
118 : K9ICG0_AGABB 0.52 0.79 1 29 640 668 29 0 0 669 K9ICG0 Uncharacterized protein OS=Agaricus bisporus var. bisporus (strain H97 / ATCC MYA-4626 / FGSC 10389) GN=AGABI2DRAFT_198218 PE=4 SV=1
119 : M1DDX9_SOLTU 0.52 0.65 1 31 107 137 31 0 0 168 M1DDX9 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400037053 PE=4 SV=1
120 : Q95QZ7_CAEEL 0.52 0.76 1 29 496 524 29 0 0 527 Q95QZ7 Protein NPL-4.1, isoform a OS=Caenorhabditis elegans GN=npl-4.1 PE=4 SV=1
121 : S2KGV1_MUCC1 0.52 0.76 1 29 565 593 29 0 0 596 S2KGV1 Uncharacterized protein OS=Mucor circinelloides f. circinelloides (strain 1006PhL) GN=HMPREF1544_01552 PE=4 SV=1
122 : U9TMY2_RHIID 0.52 0.79 2 30 586 614 29 0 0 615 U9TMY2 Uncharacterized protein OS=Rhizophagus irregularis (strain DAOM 181602 / DAOM 197198 / MUCL 43194) GN=GLOINDRAFT_336084 PE=4 SV=1
123 : W4KP44_9HOMO 0.52 0.79 1 29 630 658 29 0 0 660 W4KP44 Uncharacterized protein OS=Heterobasidion irregulare TC 32-1 GN=HETIRDRAFT_121918 PE=4 SV=1
124 : B3LZ22_DROAN 0.50 0.71 3 30 630 657 28 0 0 657 B3LZ22 GF17266 OS=Drosophila ananassae GN=Dana\GF17266 PE=4 SV=1
125 : B3P6H4_DROER 0.50 0.71 3 30 597 624 28 0 0 624 B3P6H4 GG12234 OS=Drosophila erecta GN=Dere\GG12234 PE=4 SV=1
126 : B4JHL2_DROGR 0.50 0.71 3 30 628 655 28 0 0 655 B4JHL2 GH18610 OS=Drosophila grimshawi GN=Dgri\GH18610 PE=4 SV=1
127 : B4K4W5_DROMO 0.50 0.68 3 30 626 653 28 0 0 653 B4K4W5 GI10357 OS=Drosophila mojavensis GN=Dmoj\GI10357 PE=4 SV=1
128 : B4M4M3_DROVI 0.50 0.68 3 30 628 655 28 0 0 655 B4M4M3 GJ10209 OS=Drosophila virilis GN=Dvir\GJ10209 PE=4 SV=1
129 : B4NJD8_DROWI 0.50 0.71 3 30 633 660 28 0 0 660 B4NJD8 GK14396 OS=Drosophila willistoni GN=Dwil\GK14396 PE=4 SV=1
130 : B4PTI6_DROYA 0.50 0.71 3 30 597 624 28 0 0 624 B4PTI6 GE10682 OS=Drosophila yakuba GN=Dyak\GE10682 PE=4 SV=1
131 : E2ALF9_CAMFO 0.50 0.77 1 30 182 211 30 0 0 226 E2ALF9 Nuclear protein localization protein 4-like protein OS=Camponotus floridanus GN=EAG_05450 PE=4 SV=1
132 : E9ICT2_SOLIN 0.50 0.77 1 30 188 217 30 0 0 232 E9ICT2 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_06445 PE=4 SV=1
133 : F4WXE1_ACREC 0.50 0.77 1 30 323 352 30 0 0 367 F4WXE1 Nuclear protein localization protein 4-like protein OS=Acromyrmex echinatior GN=G5I_10625 PE=4 SV=1
134 : G3MM79_9ACAR 0.50 0.73 1 30 582 611 30 0 0 611 G3MM79 Putative uncharacterized protein OS=Amblyomma maculatum PE=2 SV=1
135 : G6CVJ8_DANPL 0.50 0.64 3 30 504 531 28 0 0 578 G6CVJ8 TAK1-associated binding protein 2 isoform A OS=Danaus plexippus GN=KGM_04604 PE=4 SV=1
136 : I3RSF1_DROBU 0.50 0.71 3 30 599 626 28 0 0 626 I3RSF1 CG4673-PB-like protein OS=Drosophila buzzatii GN=Npl4 PE=4 SV=1
137 : I3RSF2_DROBU 0.50 0.71 3 30 628 655 28 0 0 655 I3RSF2 CG4673-PA-like protein OS=Drosophila buzzatii GN=Npl4 PE=4 SV=1
138 : I5APC1_DROPS 0.50 0.71 3 30 603 630 28 0 0 630 I5APC1 GA18345, isoform B OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA18345 PE=4 SV=1
139 : I5APC2_DROPS 0.50 0.71 3 30 533 560 28 0 0 560 I5APC2 GA18345, isoform C OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA18345 PE=4 SV=1
140 : NPL4_DROME 0.50 0.71 3 30 625 652 28 0 0 652 Q9VBP9 Nuclear protein localization protein 4 homolog OS=Drosophila melanogaster GN=Npl4 PE=1 SV=3
141 : Q296G8_DROPS 0.50 0.71 3 30 632 659 28 0 0 659 Q296G8 GA18345, isoform A OS=Drosophila pseudoobscura pseudoobscura GN=Dpse\GA18345 PE=4 SV=2
142 : T1GRH3_MEGSC 0.50 0.77 1 30 143 172 30 0 0 172 T1GRH3 Uncharacterized protein OS=Megaselia scalaris PE=4 SV=1
143 : T1PFW9_MUSDO 0.50 0.77 1 30 632 661 30 0 0 661 T1PFW9 NPL4 family OS=Musca domestica PE=2 SV=1
144 : W4W3B8_ATTCE 0.50 0.77 1 30 178 207 30 0 0 209 W4W3B8 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
145 : W8CDA8_CERCA 0.50 0.73 1 30 604 633 30 0 0 633 W8CDA8 Nuclear protein localization protein 4 OS=Ceratitis capitata GN=NPL4 PE=2 SV=1
146 : E1FK35_LOALO 0.48 0.68 1 31 516 546 31 0 0 548 E1FK35 NPL4 family protein OS=Loa loa GN=LOAG_01260 PE=4 SV=2
147 : J9EKS4_WUCBA 0.48 0.71 1 31 460 490 31 0 0 492 J9EKS4 NPL4 family protein (Fragment) OS=Wuchereria bancrofti GN=WUBG_06288 PE=4 SV=1
148 : T1FMC3_HELRO 0.48 0.71 1 31 577 607 31 0 0 607 T1FMC3 Uncharacterized protein OS=Helobdella robusta GN=HELRODRAFT_185061 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 106 99 51 AAAAAA AAATTTTATATTATATAAATAAAAAAAAATAAAAAAPAAAAAASSSASAA AAAAAA AAAS
2 2 A S + 0 0 131 109 61 AAAAAAAAATAAAAAAAAAAAAAAAAATAAAAATAAAVTVATTTATTTASSSSSSASPSASSSVSTAAAA
3 3 A T - 0 0 56 126 68 TTTTTTTSTTTTTTPTTTTTTTTTSTTSAASSSTATTSTSASSTATTTPSSSSSSTSASSSSSASSSSSP
4 4 A S S S- 0 0 114 126 56 SSSSSSASAAAAAASATAAAAAAASAASAAASSAAAAASAAAASASSSASSSSSSASASASSSASTSSST
5 5 A A - 0 0 69 130 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAAAASASSSAAAAAAATAAAAAAAASSSSSA
6 6 A M - 0 0 87 132 70 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVVMMMMMMMMMMMMMMMMMMLMAVVMMMMMMMMMM
7 7 A W E -A 16 0A 28 149 3 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
8 8 A A E -A 15 0A 76 149 65 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASSSSSSASASASSSPSSSSSS
9 9 A C - 0 0 15 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A Q S S+ 0 0 155 149 77 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQQQQQEQQQEQQQQLLLLLLELQLQLLLQRQVVVR
11 11 A H S S+ 0 0 136 149 30 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
12 12 A C S S- 0 0 34 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
13 13 A T + 0 0 115 149 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
14 14 A F - 0 0 104 149 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
15 15 A M E -A 8 0A 88 149 68 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVMMMMMMMMMMMM
16 16 A N E -A 7 0A 7 149 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
17 17 A Q - 0 0 77 149 71 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPPQQQQQPQQQQQQQQQQQQQQQQQQQQH
18 18 A P S S+ 0 0 52 149 57 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAAP
19 19 A G S S+ 0 0 72 148 55 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
20 20 A T + 0 0 56 149 83 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTMTTTT
21 21 A G S S+ 0 0 25 149 72 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEEGGGGDDDGGGDGDDDGEEEEEEGEAEGEEEDEDDDDD
22 22 A H S S- 0 0 123 149 86 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHLLHHHHHHHQ
23 23 A C - 0 0 12 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
24 24 A E S S+ 0 0 152 149 24 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
25 25 A M S S+ 0 0 107 149 25 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMIMMMMMMM
26 26 A C S S- 0 0 33 148 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCC
27 27 A S + 0 0 95 148 46 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSRRRN
28 28 A L - 0 0 89 148 28 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLL
29 29 A P - 0 0 65 148 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPP
30 30 A R 0 0 126 135 3 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRRRRRR
31 31 A T 0 0 155 92 55 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTSTSSSASSSSSSTSTS SSSSSATTTT
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 106 99 51 AAN S G P S GG G GSGGG GGSGA G PPPG
2 2 A S + 0 0 131 109 61 AAS S GSSS P S SS S D G AGSAS SSDSAAG PPPQ
3 3 A T - 0 0 56 126 68 SSE S ASSS P I G RRG S T GAAVGSG SSTGSSSDDDDDDDDDDSPDDDDD
4 4 A S S S- 0 0 114 126 56 SSS A TDDD A A T GGA S S GAGQGGG SSSGAAGAAAAAAAQQQASAADDA
5 5 A A - 0 0 69 130 52 SSS A EAAA D A A A AAS G G QSATGAAAATGGQAAPGNNNNNNNAAAPANNNNN
6 6 A M - 0 0 87 132 70 MMH V VSFFF M E S D VVL T E GMSTSVKTTVLIIMVPEMTTTTTTTLLLLSTTTTT
7 7 A W E -A 16 0A 28 149 3 WWWWWWWWWWWWWWWWWWWWWLWWWWWWWWWWWWWWWWWWWWWWWWRRWWIWRWWWWWWWWWWWWWWWWW
8 8 A A E -A 15 0A 76 149 65 SSAAAASTAAATAAQAPHATSASATPSSTSASSTSQRTNSETNNNTIIRNSSVTTTTTTTTTTTQTTTTT
9 9 A C - 0 0 15 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A Q S S+ 0 0 155 149 77 LVSQKSSSQQQNQQQQPKTPPPPPSPGGNQQSQSPGQKGQKPSGGSPPQGRRPNNNSSNNSSSQHNNNNN
11 11 A H S S+ 0 0 136 149 30 HHHHHDFHHHHHSSHSLHHHVHSSHSHHHSSHSHKFGHHHHHHHHHHHGHHHHHHHHHHHHHHHMHHHHH
12 12 A C S S- 0 0 34 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
13 13 A T + 0 0 115 149 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
14 14 A F - 0 0 104 149 1 FFFLYFFFFFFFFFYFFYFFFFFFFFFFFFFFFYFFFFFFLFFFFFFFFFFFFFFFFFFFFFFYFFFFFF
15 15 A M E -A 8 0A 88 149 68 MMHYNIEIHHHIEEIELVLLVEIIIIQQLEEQELILDIQIILQQQLEEDQTAEIIIIIIILLLQRIIIII
16 16 A N E -A 7 0A 7 149 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
17 17 A Q - 0 0 77 149 71 QQSSPKPSGGGREESEKPHLQEVTSAEEQEEEELKNSHEAQTEEEATTSEPKARRRRRRRAAASHRRRRR
18 18 A P S S+ 0 0 52 149 57 AAPLPPNSLLLGPPTPPPPPPPPPRPAAPPASPAPPGAARASAVAAHHCAPGPGGGGGGGAAARPGGGGG
19 19 A G S S+ 0 0 72 148 55 GGGDGTGGDDDDAASATIFHTGGSEGGGTAAGAETGW.GNHDSGADGGWAGHGEEEEEEEDDDTLEEDDE
20 20 A T + 0 0 56 149 83 TTTQTRSLRRRLAAEARMLLRTRRLRRRHTARTLRLLMRDNVSRRFGGLRITGLLLLLLLLLLDLLLLLL
21 21 A G S S+ 0 0 25 149 72 DDDTAPGGNNNQVVGVPDDAPTPPRPQQTVVQVNPPNGQEASRQQASSSQETHTTTNTTTAAAKDNNQQT
22 22 A H S S- 0 0 123 149 86 QHEEQGSSEEESLLSLGHKAGDGGTGDDLLLDLTGYVSDASNDDDMDDVDSIDSSSSSSSVVVVKSSSSS
23 23 A C - 0 0 12 149 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
24 24 A E S S+ 0 0 152 149 24 EEEEEEEEEEEEAADAEEEDEMEEEESSEAASAEEEDESEEESSSEEEESEEEEEEEEEEEEEEEEEEEE
25 25 A M S S+ 0 0 107 149 25 MMMMVMMMIIIIMMMMMMCMMVMMMMMMMIMMIMMMMMMMIMMMMMVVMMMMVIIIIIIIMMMMEIIIII
26 26 A C S S- 0 0 33 148 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A S + 0 0 95 148 46 RRRGSSGSGGGSEETESSESGGSSNSGGGEEGESSESGGNSSGGGGGGGGGAGSSSSSSSNNNSDSSSSS
28 28 A L - 0 0 89 148 28 LLLLLALLLLLLRRLRSLMLALTTLTLLLRRLRLTNTLLLLLLLLLLLTLLLLLLLLLLLLLLLMLLLLL
29 29 A P - 0 0 65 148 8 PPPPPPPPPPPPPPPPPPPPPPEQPQPPPPPPPPDPSPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPP
30 30 A R 0 0 126 135 3 RHRRRRRRRRRRRRRRRRRRR RRRR RRR RRRRRQ RRR R R R RRRRRRRRRRQRRRRRR
31 31 A T 0 0 155 92 55 TT SP T P PPNP N STA STS N T
## ALIGNMENTS 141 - 148
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A G 0 0 106 99 51 AGPATTG
2 2 A S + 0 0 131 109 61 GIPGEES
3 3 A T - 0 0 56 126 68 DGDDASSA
4 4 A S S S- 0 0 114 126 56 DSGQNSSE
5 5 A A - 0 0 69 130 52 NVNANNSS
6 6 A M - 0 0 87 132 70 TSTLQKKA
7 7 A W E -A 16 0A 28 149 3 WWWWWWWW
8 8 A A E -A 15 0A 76 149 65 TTTTQSSS
9 9 A C - 0 0 15 149 0 CCCCCCCC
10 10 A Q S S+ 0 0 155 149 77 NDNSNKKA
11 11 A H S S+ 0 0 136 149 30 HHHHHHHH
12 12 A C S S- 0 0 34 149 0 CCCCCCCC
13 13 A T + 0 0 115 149 0 TTTTTTTT
14 14 A F - 0 0 104 149 1 FFFFFFFY
15 15 A M E -A 8 0A 88 149 68 IIILLEEL
16 16 A N E -A 7 0A 7 149 0 NNNNNNNN
17 17 A Q - 0 0 77 149 71 RGRAPLSP
18 18 A P S S+ 0 0 52 149 57 GSSASVVQ
19 19 A G S S+ 0 0 72 148 55 DVEDEGGI
20 20 A T + 0 0 56 149 83 LLLLLRRN
21 21 A G S S+ 0 0 25 149 72 QSSANTTQ
22 22 A H S S- 0 0 123 149 86 SSSVSDDS
23 23 A C - 0 0 12 149 0 CCCCCCCC
24 24 A E S S+ 0 0 152 149 24 EEEEESSE
25 25 A M S S+ 0 0 107 149 25 IMIMMMMM
26 26 A C S S- 0 0 33 148 0 CCCCCCCC
27 27 A S + 0 0 95 148 46 SGSNSGGN
28 28 A L - 0 0 89 148 28 LLLLLLLL
29 29 A P - 0 0 65 148 8 PPPPPPPP
30 30 A R 0 0 126 135 3 RRRRRRRR
31 31 A T 0 0 155 92 55 SSS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 16 55 6 9 13 0 0 0 0 0 0 1 0 99 0 0 1.326 44 0.48
2 2 A 3 0 1 0 0 0 0 6 45 6 26 10 0 0 0 0 1 2 0 2 109 0 0 1.591 53 0.38
3 3 A 1 0 1 0 0 0 0 6 10 4 34 29 0 0 2 0 0 1 0 14 126 0 0 1.696 56 0.32
4 4 A 0 0 0 0 0 0 0 8 42 0 36 4 0 0 0 0 4 1 1 5 126 0 0 1.411 47 0.43
5 5 A 1 0 0 0 0 0 0 5 62 2 13 2 0 0 0 0 2 1 12 1 130 0 0 1.288 43 0.47
6 6 A 8 6 2 54 2 0 0 1 2 1 5 14 0 1 0 2 1 2 0 1 132 0 0 1.693 56 0.29
7 7 A 0 1 1 0 0 97 0 0 0 0 0 0 0 0 2 0 0 0 0 0 149 0 0 0.179 5 0.96
8 8 A 1 0 1 0 0 0 0 0 45 2 23 19 0 1 1 0 3 1 3 0 149 0 0 1.521 50 0.34
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
10 10 A 3 8 0 0 0 0 0 5 1 8 10 1 0 1 3 4 44 3 10 1 149 0 0 1.927 64 0.23
11 11 A 1 1 0 1 1 0 0 1 0 0 6 0 0 88 0 1 0 0 0 1 149 0 0 0.566 18 0.70
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
13 13 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
14 14 A 0 1 0 0 95 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 149 0 0 0.239 7 0.99
15 15 A 2 9 18 48 0 0 1 0 1 0 0 1 0 3 1 0 6 9 1 1 149 0 0 1.667 55 0.32
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 149 0 0 0.000 0 1.00
17 17 A 1 2 0 0 0 0 0 3 5 6 6 3 0 3 10 3 48 10 1 0 149 0 0 1.844 61 0.28
18 18 A 2 3 0 0 0 0 0 11 13 61 4 1 1 1 2 0 1 0 1 0 149 1 0 1.386 46 0.42
19 19 A 1 1 1 0 1 1 0 62 5 0 2 4 0 2 0 0 0 9 1 9 148 0 0 1.439 48 0.45
20 20 A 1 20 1 2 1 0 0 2 3 0 1 52 0 1 13 0 1 1 1 1 149 0 0 1.554 51 0.17
21 21 A 4 0 0 0 0 0 0 32 6 5 4 9 0 1 1 1 8 11 6 13 149 0 0 2.162 72 0.28
22 22 A 5 6 1 1 0 0 1 5 1 0 16 1 0 47 0 1 2 3 1 9 149 0 0 1.829 61 0.14
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 149 0 0 0.000 0 1.00
24 24 A 0 0 0 1 0 0 0 0 4 0 7 0 0 0 0 0 0 87 0 2 149 0 0 0.548 18 0.76
25 25 A 3 0 15 81 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 149 0 0 0.638 21 0.74
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 148 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 18 1 0 66 1 0 0 4 0 0 5 5 1 148 0 0 1.129 37 0.54
28 28 A 0 88 0 1 0 0 0 0 1 0 1 4 0 0 4 0 0 0 1 0 148 0 0 0.558 18 0.71
29 29 A 0 0 0 0 0 0 0 0 0 96 1 0 0 0 0 0 1 1 0 1 148 0 0 0.224 7 0.92
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 98 0 1 0 0 0 135 0 0 0.121 4 0.96
31 31 A 0 0 0 0 0 0 0 0 3 5 27 61 0 0 0 0 0 0 3 0 92 0 0 1.038 34 0.44
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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