Complet list of 1n6z hssp file
Complete list of 1n6z.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1N6Z
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-04
HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-NOV-02 1N6Z
COMPND MOL_ID: 1; MOLECULE: HYPOTHETICAL 12.3 KDA PROTEIN IN ZDS2-URA5 INTERG
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; ORGANISM_COM
AUTHOR A.PINEDA-LUCENA,C.H.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIU
DBREF 1N6Z A 1 105 UNP Q03759 YMK8_YEAST 1 105
SEQLENGTH 105
NCHAIN 1 chain(s) in 1N6Z data set
NALIGN 44
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : E7NL72_YEASO 1.00 1.00 1 105 1 105 105 0 0 105 E7NL72 YML108W-like protein OS=Saccharomyces cerevisiae (strain FostersO) GN=FOSTERSO_3447 PE=4 SV=1
2 : G2WJU8_YEASK 1.00 1.00 1 105 1 105 105 0 0 105 G2WJU8 K7_Yml108wp OS=Saccharomyces cerevisiae (strain Kyokai no. 7 / NBRC 101557) GN=K7_YML108W PE=4 SV=1
3 : YMK8_YEAST 1.00 1.00 1 105 1 105 105 0 0 105 Q03759 Uncharacterized protein YML108W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YML108W PE=1 SV=1
4 : A6ZLV6_YEAS7 0.98 1.00 1 105 1 105 105 0 0 105 A6ZLV6 Conserved protein OS=Saccharomyces cerevisiae (strain YJM789) GN=SCY_4068 PE=4 SV=1
5 : B3LLF1_YEAS1 0.98 1.00 1 105 1 105 105 0 0 105 B3LLF1 Putative uncharacterized protein OS=Saccharomyces cerevisiae (strain RM11-1a) GN=SCRG_01791 PE=4 SV=1
6 : C7GV90_YEAS2 0.98 1.00 1 105 1 105 105 0 0 105 C7GV90 YML108W-like protein OS=Saccharomyces cerevisiae (strain JAY291) GN=C1Q_04390 PE=4 SV=1
7 : C8ZE94_YEAS8 0.98 1.00 1 105 1 105 105 0 0 105 C8ZE94 EC1118_1M3_0276p OS=Saccharomyces cerevisiae (strain Lalvin EC1118 / Prise de mousse) GN=EC1118_1M3_0276g PE=4 SV=1
8 : E7KG60_YEASA 0.98 1.00 1 105 1 105 105 0 0 105 E7KG60 YML108W-like protein OS=Saccharomyces cerevisiae (strain AWRI796) GN=AWRI796_3508 PE=4 SV=1
9 : E7KSB0_YEASL 0.98 1.00 1 105 1 105 105 0 0 105 E7KSB0 YML108W-like protein OS=Saccharomyces cerevisiae (strain Lalvin QA23) GN=QA23_3507 PE=4 SV=1
10 : E7LYJ7_YEASV 0.98 1.00 1 105 1 105 105 0 0 105 E7LYJ7 YML108W-like protein OS=Saccharomyces cerevisiae (strain VIN 13) GN=VIN13_3495 PE=4 SV=1
11 : E7Q7F2_YEASB 0.98 0.98 1 105 1 105 105 0 0 105 E7Q7F2 YML108W-like protein OS=Saccharomyces cerevisiae (strain FostersB) GN=FOSTERSB_3461 PE=4 SV=1
12 : E7QIS7_YEASZ 0.98 1.00 1 105 1 105 105 0 0 105 E7QIS7 YML108W-like protein OS=Saccharomyces cerevisiae (strain Zymaflore VL3) GN=VL3_3509 PE=4 SV=1
13 : H0GLN7_9SACH 0.98 1.00 1 105 1 105 105 0 0 105 H0GLN7 YML108W-like protein OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_3564 PE=4 SV=1
14 : N1NYT0_YEASC 0.98 1.00 1 105 1 105 105 0 0 105 N1NYT0 Uncharacterized protein OS=Saccharomyces cerevisiae (strain CEN.PK113-7D) GN=CENPK1137D_146 PE=4 SV=1
15 : W7PMV3_YEASX 0.98 1.00 1 105 1 105 105 0 0 105 W7PMV3 Uncharacterized protein OS=Saccharomyces cerevisiae R008 GN=R008_M10206 PE=4 SV=1
16 : W7QWR0_YEASX 0.98 1.00 1 105 1 105 105 0 0 105 W7QWR0 Uncharacterized protein OS=Saccharomyces cerevisiae P283 GN=P283_M10201 PE=4 SV=1
17 : J8PK50_SACAR 0.94 0.98 1 105 1 105 105 0 0 105 J8PK50 YML108W OS=Saccharomyces arboricola (strain H-6 / AS 2.3317 / CBS 10644) GN=SU7_2424 PE=4 SV=1
18 : H0GYW6_9SACH 0.93 0.99 1 105 1 105 105 0 0 105 H0GYW6 YML108W-like protein OS=Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7 GN=VIN7_8973 PE=4 SV=1
19 : J8TR16_SACK1 0.93 0.99 9 105 1 97 97 0 0 97 J8TR16 YML108W-like protein OS=Saccharomyces kudriavzevii (strain ATCC MYA-4449 / AS 2.2408 / CBS 8840 / NBRC 1802 / NCYC 2889) GN=YML108W PE=4 SV=1
20 : Q6FP49_CANGA 0.64 0.75 4 105 2 103 103 2 2 112 Q6FP49 Similar to uniprot|Q03759 Saccharomyces cerevisiae YML108w OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=CAGL0J06666g PE=4 SV=1
21 : G0VB70_NAUCC 0.62 0.76 1 105 1 109 109 1 4 115 G0VB70 Uncharacterized protein OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 / NBRC 1992 / NRRL Y-12630) GN=NCAS0B01100 PE=4 SV=1
22 : G8BX98_TETPH 0.62 0.72 2 105 3 119 117 3 13 138 G8BX98 Uncharacterized protein OS=Tetrapisispora phaffii (strain ATCC 24235 / CBS 4417 / NBRC 1672 / NRRL Y-8282 / UCD 70-5) GN=TPHA0I00190 PE=4 SV=1
23 : Q6CSE6_KLULA 0.62 0.75 2 104 3 102 104 4 5 112 Q6CSE6 KLLA0D01661p OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=KLLA0D01661g PE=4 SV=1
24 : J7S877_KAZNA 0.61 0.76 6 105 8 111 104 2 4 111 J7S877 Uncharacterized protein OS=Kazachstania naganishii (strain ATCC MYA-139 / BCRC 22969 / CBS 8797 / CCRC 22969 / KCTC 17520 / NBRC 10181 / NCYC 3082) GN=KNAG0G03360 PE=4 SV=1
25 : W0T464_KLUMA 0.61 0.78 2 104 3 101 103 1 4 106 W0T464 Uncharacterized protein YML108W OS=Kluyveromyces marxianus DMKU3-1042 GN=KLMA_10578 PE=4 SV=1
26 : M9MUZ6_ASHG1 0.60 0.77 1 105 1 102 105 1 3 112 M9MUZ6 FAAL184Wp OS=Ashbya gossypii (strain FDAG1) GN=FAGOS_FAAL184W PE=4 SV=1
27 : Q75FB5_ASHGO 0.60 0.77 1 105 1 102 105 1 3 112 Q75FB5 AAL184Wp OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=AAL184W PE=4 SV=1
28 : A7TRB3_VANPO 0.59 0.81 2 105 4 112 109 3 5 115 A7TRB3 Putative uncharacterized protein OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_1069p3 PE=4 SV=1
29 : C5E0M2_ZYGRC 0.59 0.77 2 104 3 99 106 4 12 112 C5E0M2 ZYRO0G13970p OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) GN=ZYRO0G13970g PE=4 SV=1
30 : H2AMW2_KAZAF 0.59 0.78 2 105 3 112 110 2 6 112 H2AMW2 Uncharacterized protein OS=Kazachstania africana (strain ATCC 22294 / BCRC 22015 / CBS 2517 / CECT 1963 / NBRC 1671 / NRRL Y-8276) GN=KAFR0A02760 PE=4 SV=1
31 : R9X8U8_ASHAC 0.59 0.77 1 105 1 102 105 1 3 112 R9X8U8 AaceriAAL184Wp OS=Ashbya aceri GN=AACERI_AaceriAAL184W PE=4 SV=1
32 : S6E345_ZYGB2 0.59 0.76 5 104 6 99 101 2 8 106 S6E345 ZYBA0S04-07206g1_1 OS=Zygosaccharomyces bailii (strain CLIB 213 / ATCC 58445 / CBS 680 / CCRC 21525 / NBRC 1098 / NCYC 1416 / NRRL Y-2227) GN=BN860_07206g PE=4 SV=1
33 : W0VG95_ZYGBA 0.59 0.76 5 104 6 99 101 2 8 106 W0VG95 Uncharacterized protein OS=Zygosaccharomyces bailii ISA1307 GN=ZBAI_00309 PE=4 SV=1
34 : C5DDV4_LACTC 0.58 0.76 1 105 1 108 108 3 3 113 C5DDV4 KLTH0C04070p OS=Lachancea thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=KLTH0C04070g PE=4 SV=1
35 : W0VW45_ZYGBA 0.58 0.75 5 104 6 99 101 2 8 106 W0VW45 Uncharacterized protein OS=Zygosaccharomyces bailii ISA1307 GN=ZBAI_05468 PE=4 SV=1
36 : I2GYF8_TETBL 0.57 0.73 2 105 3 122 120 4 16 122 I2GYF8 Uncharacterized protein OS=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) GN=TBLA0B03190 PE=4 SV=1
37 : G8JPF0_ERECY 0.55 0.73 1 105 4 104 106 3 6 115 G8JPF0 Uncharacterized protein OS=Eremothecium cymbalariae (strain CBS 270.75 / DBVPG 7215 / KCTC 17166 / NRRL Y-17582) GN=Ecym_2711 PE=4 SV=1
38 : G0WAT2_NAUDC 0.52 0.67 2 105 3 122 120 4 16 122 G0WAT2 Uncharacterized protein OS=Naumovozyma dairenensis (strain ATCC 10597 / BCRC 20456 / CBS 421 / NBRC 0211 / NRRL Y-12639) GN=NDAI0E00360 PE=4 SV=1
39 : G8ZNK2_TORDC 0.52 0.73 2 105 3 110 113 4 14 111 G8ZNK2 Uncharacterized protein OS=Torulaspora delbrueckii (strain ATCC 10662 / CBS 1146 / NBRC 0425 / NCYC 2629 / NRRL Y-866) GN=TDEL0B00670 PE=4 SV=1
40 : G8BG60_CANPC 0.36 0.55 7 103 18 98 97 4 16 129 G8BG60 Putative uncharacterized protein OS=Candida parapsilosis (strain CDC 317 / ATCC MYA-4646) GN=CPAR2_204870 PE=4 SV=1
41 : A5E0S9_LODEL 0.35 0.57 8 103 19 96 96 3 18 137 A5E0S9 Putative uncharacterized protein OS=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) GN=LELG_03216 PE=4 SV=1
42 : Q6BLI6_DEBHA 0.35 0.55 8 103 21 98 97 5 20 125 Q6BLI6 DEHA2F13134p OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) GN=DEHA2F13134g PE=4 SV=1
43 : H8X690_CANO9 0.32 0.53 7 103 18 98 97 4 16 134 H8X690 Uncharacterized protein OS=Candida orthopsilosis (strain 90-125) GN=CORT_0D04980 PE=4 SV=1
44 : G3AJY8_SPAPN 0.31 0.57 8 103 17 94 97 4 20 116 G3AJY8 Putative uncharacterized protein OS=Spathaspora passalidarum (strain NRRL Y-27907 / 11-Y1) GN=SPAPADRAFT_59464 PE=4 SV=1
## ALIGNMENTS 1 - 44
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 127 25 0 MMMMMMMMMMMMMMMMMM M MM M M M
2 2 A S + 0 0 100 34 44 SSSSSSSSSSSSSSSSSS SGA TAAGGGA S SSSG
3 3 A K S S- 0 0 120 34 76 KKKKKKKKKKKKKKKKKK KET STTAPST D NATN
4 4 A S S S+ 0 0 108 35 62 SSSSSSSSSSSSSSSSNS SDSE EDDEEDD E SDND
5 5 A N + 0 0 88 38 25 NNNNNNNNNNNNNNNNNN NNAN NNNSNNNNNRNVNNN
6 6 A T - 0 0 80 39 90 TTTTTTTTTTTTTTTTTT LMPVTVFFNSRFLLNLAFMF
7 7 A Y E -A 43 0A 48 41 0 YYYYYYYYYYYYYYYYYY YYYYYYYYYYYYYYYYYYYYY Y
8 8 A R E -A 42 0A 105 44 23 RRRRRRRRRRRRRRRRRR RRRRRRRRRRRRHHRHRRRHPRRPR
9 9 A M E -Ab 41 82A 4 45 17 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMLIALI
10 10 A L E -Ab 40 83A 34 45 32 LLLLLLLLLLLLLLLLLLLMLLLLLMMLLLMLLLLMMMIRVIRI
11 11 A V E -Ab 39 84A 0 45 17 VVVVVVVVVVVVVVVVVVVVVVIIIIIIVVIVVVVVIIIILIII
12 12 A L E +Ab 37 85A 16 45 17 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFVVVVV
13 13 A L E - b 0 86A 23 45 7 LLLLLLLLLLLLLLLLLLLLLLLVLLLLLLLLLVLLLLLLLVLL
14 14 A E - 0 0 45 45 28 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVDNVN
15 15 A D - 0 0 94 45 46 DDDDDDDDDDDDDDDDDDDEEEEEEEEEEEEEEDEEEEETISTS
16 16 A D - 0 0 72 45 65 DDDDDDDDDDDDDDDDDDDPEPPPPPPGPEPPPVPDAESDAADP
17 17 A T - 0 0 58 45 87 TTTTTTTTTTTTTTTTTTTMMlILAHHmVsHVVlVmIiiEGEDS
18 18 A K - 0 0 170 34 63 KKKKKKKKKKKKKKKKKKKEEr.EPKKn.vK..q.k.is.....
19 19 A I - 0 0 61 34 85 IIIIIIIIIIIIIIIIIIIEED.DEQQL.IQ..A.S.DV.....
20 20 A N >> - 0 0 89 40 70 NNNNNNNNNNNNNNNNDSSDpgSdSHHdSeN..g.ePeDP.SP.
21 21 A K T 34 S+ 0 0 163 34 72 KKKKKKKKKKKKKKKKKKKInv.tKSSt.nT..k.dEe......
22 22 A E T 34 S- 0 0 177 35 57 EEEEEEEEEEEEEEEEEEETDNEEETTQ.DS..N.NST......
23 23 A D T <4 S- 0 0 110 35 58 DDDDDDDDDDDDDDDDDDDITESVDDDQ.ND..E.TKK......
24 24 A E < + 0 0 83 35 60 EEEEEEEEEEEEEEEEEEESTHATTGGD.GG..Q.EDD......
25 25 A K S S+ 0 0 117 38 59 KKKKKNKKKKKKKKKKKKKDDNGSKRRR.ERKKEKKEV......
26 26 A F S S+ 0 0 190 38 113 FFFFFFFFFFFFFFFFFFF.SVDEKKKT.QKGGTGVNHN.....
27 27 A L S S- 0 0 51 39 93 LLLLLLLLLLLLLLLLLLLSKETDQIIE.PITTKTTING.....
28 28 A K - 0 0 179 43 58 KKKKKKKKKKKKKKKKKKKKAKKGNEEEGKESSGSTKSEKK.K.
29 29 A G - 0 0 12 43 65 GGGGGGGGGGGGGGGGGGGETGKSANNPSQNEEEETADDSE.S.
30 30 A K - 0 0 161 44 62 KKKKKKKKKKKKKKKKKKKEEEKQTAAKKEAQQGQKNEKKT.KH
31 31 A P - 0 0 24 45 67 PPPPPPPPPPPPPPPPPPPKPtQPHSSEpSSEEAEnaeqETpEp
32 32 A G S S+ 0 0 79 39 68 GGGGGGGGGGGGGGGGGGGKKs.IE..SeT.DDPNp.vvS.gSg
33 33 A K S S- 0 0 146 39 37 KKKKKKKKKKKKKKKKKKKVKKNK...KKK.KKKKK.KKE.DEE
34 34 A M + 0 0 115 39 67 MMMMMMMMMMMMMMMMMMMMTSas...kkS.kkakk.ksM.MMM
35 35 A H S S+ 0 0 77 39 0 HHHHHHHHHHHHHHHHHHHHHHhh.HHhhHHhhhhhhhh.....
36 36 A E - 0 0 95 39 8 EEEEEEEEEEEEEEEEEEEEEEEE.DDEEEDEEEEEDEE.....
37 37 A F E -A 12 0A 127 40 0 FFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFF.....
38 38 A V E - 0 0A 83 41 19 VVVVVVVVVVVVVIVVIVVMIVVIVVVVMIVVVVVIVIV.M...
39 39 A D E -A 11 0A 73 41 8 DDDDDDDDDDDDDDDDDDDDEDDDDDDDDEDDDDDDDED.E...
40 40 A E E -A 10 0A 82 45 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQ
41 41 A L E -A 9 0A 20 45 45 LLLLLLLLLLLLLLLLLLLLLLLLVLLLLLLLLLLLVLLEEEED
42 42 A I E -A 8 0A 82 44 54 IIIVVVVVVVXVVIVVIIITLIPHTLLVVILVVIVIVIVIRAIR
43 43 A L E -A 7 0A 13 45 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
44 44 A P + 0 0 12 45 39 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPVLLLL
45 45 A F - 0 0 3 45 67 FFFFFFFFFFFFFFFFFFFFFFIFIIIFFFIFFFLFMFFDDDDD
46 46 A N > - 0 0 1 45 70 NNNNNNNNNNNNNNNNQEEQENQGQQQQNEQAAEAHQGQTSGRT
47 47 A V T 3 S+ 0 0 75 45 19 VVVVVVVVVVVVVVVVVIIIVVVLVVVVVTVVVIVVVTVIVVII
48 48 A D T 3 S+ 0 0 94 45 32 DDDDDDDDDDDDDDDDDDDDSDDDDDDDDSDDDDDDDEDSQQTQ
49 49 A E <> + 0 0 24 45 41 EEEEEEEEEEEEEEEEEEEEEEEEEDDEEEDQQDQEEEESTSSS
50 50 A L H > S+ 0 0 43 45 17 LLLLLLLLLLLLLLLLLLLILLMLMLLIILLLLMLLLLIFFFFM
51 51 A D H > S+ 0 0 143 45 18 DDDDDDDDDDDDDDDDDDDDDDDDDEEDDDDDDDDDDDDKDDRE
52 52 A E H > S+ 0 0 107 45 77 EEEEEEEEEEEEEEEEEEELAMLALVVSQTVEEKEIVLALEDME
53 53 A L H X S+ 0 0 6 45 9 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMVMMV
54 54 A N H X S+ 0 0 94 45 4 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNNNN
55 55 A T H X S+ 0 0 88 45 78 TTTTTTTTTTTTTTTTVIIKKESESTTDSEASSESEKEEALEVD
56 56 A W H X S+ 0 0 45 45 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFFFFF
57 57 A F H X S+ 0 0 40 45 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
58 58 A D H X S+ 0 0 107 45 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
59 59 A K H >X S+ 0 0 120 45 20 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAKKAE
60 60 A F H 3X S+ 0 0 39 45 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
61 61 A D H 3X S+ 0 0 39 45 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
62 62 A A H < S+ 0 0 51 45 28 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSSCSCCCCAAAAC
66 66 A I T 3< S+ 0 0 130 45 6 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIILIIIVIVI
67 67 A P T 3 S+ 0 0 46 45 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
68 68 A N < - 0 0 10 45 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
69 69 A E + 0 0 172 45 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
70 70 A G S S- 0 0 36 45 4 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGG
71 71 A H - 0 0 171 45 16 HHHHHHHHHHHHHHHHHHHHHHHHNHHHHNHHHFHHYHHHHHHH
72 72 A I E -C 86 0A 37 45 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
73 73 A K E +C 85 0A 89 45 5 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQ
74 74 A Y E -C 84 0A 96 45 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
75 75 A E E -C 83 0A 111 45 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
76 76 A I E -C 82 0A 58 45 9 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVVVV
77 77 A S E >> -C 81 0A 47 45 47 SSSSSSSSSSSSSSSSSSSTSTSSSSSTTSSTTSTTSTTGGGGG
78 78 A S T 34 S+ 0 0 84 45 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
79 79 A D T 34 S- 0 0 147 45 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
80 80 A G T <4 S+ 0 0 9 45 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
81 81 A L E < + C 0 77A 82 45 12 LLLLLLLLLLLLLLLLLLLLLLLLLLLIILLIILILLLMLLLLM
82 82 A I E +bC 9 76A 4 45 13 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIVIIIIMVVVVV
83 83 A V E -bC 10 75A 26 45 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVV
84 84 A L E -bC 11 74A 10 45 15 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIIIIV
85 85 A M E +bC 12 73A 19 45 36 MMMMMMMMMMMMMMMMMMMILMIMIIIIILIVVLVIMLLIIVIL
86 86 A L E -bC 13 72A 0 45 19 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLVLLVVVVV
87 87 A D > - 0 0 35 45 7 DDDDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDSDDDDDDD
88 88 A K G > S+ 0 0 82 45 40 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKRKNQKKDTSSS
89 89 A E G 3 S+ 0 0 130 45 51 EEEEEEEEEEEEEEEEVEEEEESESEEEEQEKKSKDEEETKLTE
90 90 A I G X> S+ 0 0 0 45 59 IIIIIIIIIIIIIIIIIIILIIIIIIIIMIILLKLIRILKESKE
91 91 A E H <> + 0 0 73 45 62 EEEEEEEEEEEEEEEEEQQgEEEEESSEEESEEEEKSEELLLLL
92 92 A E H 3> S+ 0 0 72 40 55 EEEEEEEEEEEEEEEEEEEeNHHHHEENPNDHHDHHSDH.....
93 93 A V H <> S+ 0 0 0 40 22 VVVVVVVVVVVVVVVVVVVFVVIVLVVVLVVLLVLVIVL.....
94 94 A V H X S+ 0 0 15 45 46 VVVVVVVVVVVVVVVVVVVVIVVYVIILVVIVVVVVVVVKERKM
95 95 A E H X S+ 0 0 116 45 57 EEEEEEEEEEEEEEEEEEEGSSQEAGGDSEGTTATENGNDDDDG
96 96 A K H X S+ 0 0 82 45 63 KKKKKKKKKKKKKKKKKKKKEKEQDLLKQKSDDQDQQEDSKKDD
97 97 A V H X S+ 0 0 3 45 21 VVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVIVVVAAA
98 98 A K H X S+ 0 0 61 45 56 KKKKKKKKKKKKKKKKKKKKKKTKKRRKRKRRRRRKKKKVLLVL
99 99 A K H X S+ 0 0 95 45 61 KKKKKKKKKKKKKKKKKNNTKESSQDDESEDSSKSDNKTKAKKK
100 100 A F H X S+ 0 0 19 45 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
101 101 A V H X S+ 0 0 2 45 11 VVVVVVVVVVVVVVVVVVVVIVVIVVVVVVVVVVVVVIVVVMII
102 102 A E H < S+ 0 0 105 44 38 EEEDDEDDDDXDDDDDEEEEDSEEEAAQENTEEEEQAEEEDEDD
103 103 A E H < S+ 0 0 138 45 61 EEEEEEEEEEEEEEEEEDDQDAQTEAASKNANNANNKTEEGDDG
104 104 A N H < 0 0 62 40 23 NNNNNNNNNNNNNNNNNNNNNNNHNNNNHNNHHEHNNNN
105 105 A N < 0 0 104 34 63 NNNNNNNNNNNNNNNNNNNNQQ Q QQH QQ S QPQS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 15 12 0 71 3 0 0 0 0 0 0 0 0 34 0 0 0.883 29 0.55
3 3 A 0 0 0 0 0 0 0 0 6 3 6 15 0 0 0 59 0 3 6 3 34 0 0 1.405 46 0.24
4 4 A 0 0 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 14 6 20 35 0 0 1.070 35 0.38
5 5 A 3 0 0 0 0 0 0 0 3 0 3 0 0 0 3 0 0 0 89 0 38 0 0 0.482 16 0.74
6 6 A 5 10 0 5 13 0 0 0 3 3 3 51 0 0 3 0 0 0 5 0 39 0 0 1.672 55 0.10
7 7 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 0 0 5 0 0 0 9 86 0 0 0 0 0 44 0 0 0.485 16 0.76
9 9 A 0 7 4 87 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.528 17 0.82
10 10 A 2 71 7 16 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 45 0 0 0.935 31 0.67
11 11 A 67 2 31 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.718 23 0.82
12 12 A 11 87 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.453 15 0.83
13 13 A 7 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.245 8 0.92
14 14 A 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 4 2 45 0 0 0.466 15 0.72
15 15 A 0 0 2 0 0 0 0 0 0 0 4 4 0 0 0 0 0 42 0 47 45 0 0 1.081 36 0.54
16 16 A 2 0 0 0 0 0 0 2 7 29 2 0 0 0 0 0 0 7 0 51 45 0 0 1.317 43 0.35
17 17 A 9 7 9 9 0 0 0 2 2 0 4 44 0 7 0 0 0 4 0 2 45 11 7 1.897 63 0.12
18 18 A 3 0 3 0 0 0 0 0 0 3 3 0 0 0 3 71 3 9 3 0 34 0 0 1.186 39 0.37
19 19 A 3 3 62 0 0 0 0 0 3 0 3 0 0 0 0 0 9 9 0 9 34 0 0 1.355 45 0.14
20 20 A 0 0 0 0 0 0 0 5 0 10 15 0 0 5 0 0 0 8 45 13 40 6 8 1.628 54 0.30
21 21 A 3 0 3 0 0 0 0 0 0 0 6 9 0 0 0 65 0 6 6 3 34 0 0 1.307 43 0.27
22 22 A 0 0 0 0 0 0 0 0 0 0 6 11 0 0 0 0 3 66 9 6 35 0 0 1.163 38 0.42
23 23 A 3 0 3 0 0 0 0 0 0 0 3 6 0 0 0 6 3 6 3 69 35 0 0 1.257 41 0.42
24 24 A 0 0 0 0 0 0 0 11 3 0 3 9 0 3 0 0 3 60 0 9 35 0 0 1.382 46 0.40
25 25 A 3 0 0 0 0 0 0 3 0 0 3 0 0 0 11 63 0 8 5 5 38 1 0 1.325 44 0.40
26 26 A 5 0 0 0 53 0 0 8 0 0 3 5 0 3 0 11 3 3 5 3 38 0 0 1.719 57 -0.14
27 27 A 0 51 10 0 0 0 0 3 0 3 3 13 0 0 0 5 3 5 3 3 39 0 0 1.708 57 0.06
28 28 A 0 0 0 0 0 0 0 7 2 0 9 2 0 0 0 65 0 12 2 0 43 0 0 1.199 40 0.42
29 29 A 0 0 0 0 0 0 0 49 5 2 9 5 0 0 0 2 2 14 7 5 43 0 0 1.722 57 0.35
30 30 A 0 0 0 0 0 0 0 2 7 0 0 5 0 2 0 61 9 11 2 0 44 0 0 1.346 44 0.37
31 31 A 0 0 0 0 0 0 0 0 4 56 9 4 0 2 0 2 4 16 2 0 45 6 7 1.500 50 0.32
32 32 A 5 0 3 0 0 0 0 56 0 5 10 3 0 0 0 5 0 5 3 5 39 1 0 1.600 53 0.32
33 33 A 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 85 0 8 3 3 39 0 0 0.620 20 0.62
34 34 A 0 0 0 64 0 0 0 0 5 0 10 3 0 0 0 18 0 0 0 0 39 4 11 1.073 35 0.33
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 39 0 0 0.000 0 1.00
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90 0 10 39 0 0 0.331 11 0.91
37 37 A 0 0 0 0 98 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.117 3 1.00
38 38 A 76 0 17 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 41 0 0 0.705 23 0.81
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 0 90 41 0 0 0.320 10 0.91
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 45 0 0 0.107 3 0.96
41 41 A 4 84 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 2 45 0 0 0.581 19 0.54
42 42 A 41 9 34 0 0 0 0 0 2 2 0 5 0 2 5 0 0 0 0 0 44 0 0 1.490 49 0.45
43 43 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
44 44 A 2 9 0 0 0 0 0 0 0 89 0 0 0 0 0 0 0 0 0 0 45 0 0 0.404 13 0.61
45 45 A 0 2 11 2 73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 45 0 0 0.885 29 0.33
46 46 A 0 0 0 0 0 0 0 7 7 0 2 4 0 2 2 0 22 11 42 0 45 0 0 1.696 56 0.29
47 47 A 78 2 16 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 45 0 0 0.708 23 0.80
48 48 A 0 0 0 0 0 0 0 0 0 0 7 2 0 0 0 0 7 2 0 82 45 0 0 0.691 23 0.67
49 49 A 0 0 0 0 0 0 0 0 0 0 9 2 0 0 0 0 7 73 0 9 45 0 0 0.923 30 0.58
50 50 A 0 73 9 9 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.873 29 0.82
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 7 0 89 45 0 0 0.454 15 0.81
52 52 A 9 11 2 4 0 0 0 0 7 0 2 2 0 0 0 2 2 56 0 2 45 0 0 1.612 53 0.22
53 53 A 4 89 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.424 14 0.91
54 54 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 98 0 45 0 0 0.107 3 0.95
55 55 A 4 2 4 0 0 0 0 0 4 0 13 42 0 0 0 7 0 18 0 4 45 0 0 1.758 58 0.21
56 56 A 0 0 0 0 11 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.349 11 0.95
57 57 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 45 0 0 0.000 0 1.00
59 59 A 0 0 0 0 0 0 0 0 4 0 0 0 0 0 0 93 0 2 0 0 45 0 0 0.287 9 0.80
60 60 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
61 61 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 45 0 0 0.000 0 1.00
62 62 A 0 0 0 0 0 0 0 0 47 0 2 0 0 0 0 0 7 38 0 7 45 0 0 1.169 39 0.42
63 63 A 0 0 0 0 0 0 0 0 4 0 0 2 0 0 0 9 13 69 0 2 45 0 0 1.048 34 0.54
64 64 A 9 2 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.404 13 0.91
65 65 A 0 0 0 0 0 0 0 0 9 0 7 0 84 0 0 0 0 0 0 0 45 0 0 0.538 17 0.72
66 66 A 4 2 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.287 9 0.94
67 67 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
68 68 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 45 0 0 0.000 0 1.00
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 45 0 0 0.000 0 1.00
70 70 A 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 2 0 0 45 0 0 0.107 3 0.95
71 71 A 0 0 0 0 2 0 2 0 0 0 0 0 0 91 0 0 0 0 4 0 45 0 0 0.392 13 0.83
72 72 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
73 73 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 2 0 0 0 45 0 0 0.107 3 0.94
74 74 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 45 0 0 0.000 0 1.00
76 76 A 11 0 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.349 11 0.91
77 77 A 0 0 0 0 0 0 0 11 0 0 67 22 0 0 0 0 0 0 0 0 45 0 0 0.849 28 0.53
78 78 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
79 79 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 45 0 0 0.000 0 1.00
80 80 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
81 81 A 0 84 11 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.525 17 0.88
82 82 A 16 0 82 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.535 17 0.86
83 83 A 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.107 3 0.99
84 84 A 2 89 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.404 13 0.84
85 85 A 9 13 27 51 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 1.179 39 0.63
86 86 A 13 84 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.496 16 0.81
87 87 A 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 96 45 0 0 0.213 7 0.92
88 88 A 0 0 0 0 0 0 0 0 0 0 7 2 0 0 4 80 2 0 2 2 45 0 0 0.836 27 0.60
89 89 A 2 2 0 0 0 0 0 0 0 0 7 4 0 0 0 9 2 71 0 2 45 0 0 1.115 37 0.48
90 90 A 0 11 71 2 0 0 0 0 0 0 2 0 0 0 2 7 0 4 0 0 45 0 0 1.059 35 0.41
91 91 A 0 11 0 0 0 0 0 2 0 0 9 0 0 0 0 2 4 71 0 0 45 5 1 1.009 33 0.37
92 92 A 0 0 0 0 0 0 0 0 0 3 3 0 0 22 0 0 0 57 8 8 40 0 0 1.227 40 0.45
93 93 A 77 15 5 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.724 24 0.77
94 94 A 76 2 9 2 0 0 2 0 0 0 0 0 0 0 2 4 0 2 0 0 45 0 0 0.988 32 0.53
95 95 A 0 0 0 0 0 0 0 13 4 0 7 7 0 0 0 0 2 51 4 11 45 0 0 1.578 52 0.43
96 96 A 0 4 0 0 0 0 0 0 0 0 4 0 0 0 0 58 11 7 0 16 45 0 0 1.308 43 0.37
97 97 A 89 0 4 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.424 14 0.79
98 98 A 4 7 0 0 0 0 0 0 0 0 0 2 0 0 18 69 0 0 0 0 45 0 0 0.967 32 0.43
99 99 A 0 0 0 0 0 0 0 0 2 0 13 4 0 0 0 56 2 7 7 9 45 0 0 1.479 49 0.38
100 100 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
101 101 A 87 0 11 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.453 15 0.89
102 102 A 0 0 0 0 0 0 0 0 7 0 2 2 0 0 0 0 5 48 2 34 44 0 0 1.302 43 0.61
103 103 A 0 0 0 0 0 0 0 4 11 0 2 4 0 0 0 4 4 47 11 11 45 0 0 1.726 57 0.39
104 104 A 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 3 85 0 40 0 0 0.490 16 0.77
105 105 A 0 0 0 0 0 0 0 0 0 3 6 0 0 3 0 0 26 0 62 0 34 0 0 1.024 34 0.36
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
20 88 89 1 gEe
21 21 21 4 pELFDn
22 17 19 8 lEENIETLTr
22 20 30 4 gDVKEv
22 31 45 1 tQs
23 30 32 1 aTh
24 16 23 3 dVPTt
24 30 40 1 sTh
28 17 20 1 mEn
28 20 24 3 dEEQt
28 34 41 1 kMh
29 22 24 2 pEDe
29 25 29 1 kVh
30 17 19 2 sEEv
30 20 24 4 eKFEDn
32 24 29 1 kEh
33 24 29 1 kEh
34 18 18 1 lEq
34 21 22 1 gEk
34 35 37 1 aTh
35 24 29 1 kSh
36 17 19 9 mEPIEDDINLk
36 20 31 4 eSSSNd
36 31 46 2 nTEp
36 34 51 1 kSh
37 30 33 1 aTh
38 17 19 9 iGEPDLKDGSi
38 20 31 4 eATETe
38 31 46 2 eKNv
38 34 51 1 kMh
39 17 19 7 iENGQEGNs
39 26 35 1 qDv
39 29 39 1 sSh
42 13 33 1 pEg
44 13 29 1 pDg
//