Complet list of 1m2e hssp file
Complete list of 1m2e.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1M2E
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-03
HEADER CIRCADIAN CLOCK PROTEIN 23-JUN-02 1M2E
COMPND MOL_ID: 1; MOLECULE: KAIA; CHAIN: A; FRAGMENT: N-TERMINAL DOMAIN (RESI
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SYNECHOCOCCUS ELONGATUS; ORGANISM_TAXI
AUTHOR S.B.WILLIAMS,I.VAKONAKIS,S.S.GOLDEN,A.C.LIWANG
DBREF 1M2E A 1 135 UNP Q79PF6 KAIA_SYNP7 1 135
SEQLENGTH 135
NCHAIN 1 chain(s) in 1M2E data set
NALIGN 13
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : KAIA_SYNE7 1R8J 1.00 1.00 1 135 1 135 135 0 0 284 Q79PF6 Circadian clock protein KaiA OS=Synechococcus elongatus (strain PCC 7942) GN=kaiA PE=1 SV=1
2 : Q5N596_SYNP6 0.99 1.00 1 135 1 135 135 0 0 284 Q5N596 Circadian clock protein KaiA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=kaiA PE=4 SV=1
3 : B1WND3_CYAA5 0.32 0.62 1 130 1 129 130 1 1 298 B1WND3 Circadian clock protein OS=Cyanothece sp. (strain ATCC 51142) GN=kaiA PE=4 SV=1
4 : Q3AHR7_SYNSC 0.31 0.56 11 133 12 127 125 3 11 294 Q3AHR7 Possible circadian clock protein KaiA (Precursor) OS=Synechococcus sp. (strain CC9605) GN=Syncc9605_2126 PE=4 SV=1
5 : A5GV20_SYNR3 0.30 0.60 2 126 3 120 127 4 11 293 A5GV20 Circadian clock protein KaiA OS=Synechococcus sp. (strain RCC307) GN=kaiA PE=4 SV=1
6 : G5J1U8_CROWT 0.30 0.57 24 130 5 113 109 1 2 282 G5J1U8 Circadian clock protein KaiA OS=Crocosphaera watsonii WH 0003 GN=CWATWH0003_1479 PE=4 SV=1
7 : I4FPK7_MICAE 0.30 0.60 27 130 37 140 104 0 0 309 I4FPK7 Circadian clock protein kaiA OS=Microcystis aeruginosa PCC 9717 GN=kaiA PE=4 SV=1
8 : I4HXD4_MICAE 0.30 0.60 27 130 37 140 104 0 0 309 I4HXD4 Circadian clock protein kaiA OS=Microcystis aeruginosa PCC 9809 GN=kaiA PE=4 SV=1
9 : I4ICV5_9CHRO 0.30 0.60 27 130 37 140 104 0 0 309 I4ICV5 Circadian clock protein kaiA OS=Microcystis sp. T1-4 GN=kaiA PE=4 SV=1
10 : T2I6I4_CROWT 0.30 0.57 24 130 5 113 109 1 2 282 T2I6I4 Circadian clock protein KaiA OS=Crocosphaera watsonii WH 8502 GN=CWATWH8502_989 PE=4 SV=1
11 : T2J0G2_CROWT 0.30 0.57 24 130 5 113 109 1 2 282 T2J0G2 Circadian clock protein KaiA OS=Crocosphaera watsonii WH 0005 GN=CWATWH0005_554 PE=4 SV=1
12 : T2JJ52_CROWT 0.30 0.57 24 130 5 113 109 1 2 282 T2JJ52 Circadian clock protein KaiA OS=Crocosphaera watsonii WH 0401 GN=CWATWH0401_3831 PE=4 SV=1
13 : T2JU94_CROWT 0.30 0.57 24 130 5 113 109 1 2 282 T2JU94 Circadian clock protein KaiA OS=Crocosphaera watsonii WH 0402 GN=CWATWH0402_3749 PE=4 SV=1
## ALIGNMENTS 1 - 13
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 213 4 0 MMM
2 2 A L + 0 0 107 5 82 LLQ V
3 3 A S - 0 0 100 5 67 SST T
4 4 A Q - 0 0 109 5 68 QQR E
5 5 A I E -a 29 0A 5 5 39 IIL L
6 6 A A E +a 30 0A 11 5 83 AAS V
7 7 A I E -ab 31 53A 0 5 0 III I
8 8 A C E -ab 32 54A 0 5 49 CCC G
9 9 A I E -ab 33 55A 0 5 77 IIL A
10 10 A W E +a 34 0A 4 5 51 WWY L
11 11 A V - 0 0 5 6 62 VVSLV
12 12 A E S S+ 0 0 128 6 85 EESGR
13 13 A S > - 0 0 49 6 60 SSDSN
14 14 A T H > S+ 0 0 91 6 78 TTEPE
15 15 A A H > S+ 0 0 49 6 81 AAHAL
16 16 A I H > S+ 0 0 53 6 34 IILLL
17 17 A L H X S+ 0 0 13 6 59 LLTVL
18 18 A Q H X S+ 0 0 83 6 48 QQQEK
19 19 A D H X S+ 0 0 62 6 101 DDLAS
20 20 A C H X S+ 0 0 0 6 66 CCLCC
21 21 A Q H < S+ 0 0 39 6 82 QQTRR
22 22 A R H >< S+ 0 0 152 6 73 RRHPQ
23 23 A A H 3< S+ 0 0 20 6 121 AAHWW
24 24 A L T 3< S+ 0 0 0 11 0 LLLLLL LLLL
25 25 A S < + 0 0 78 11 40 SSSPrS SSSS
26 26 A A > - 0 0 37 11 40 AAGAaG GGGG
27 27 A D T 3 S+ 0 0 161 14 23 DDDNDDEEEDDDD
28 28 A R T 3 S+ 0 0 85 14 0 RRRRRRRRRRRRR
29 29 A Y E < -a 5 0A 24 14 1 YYYYFYYYYYYYY
30 30 A Q E -a 6 0A 99 14 64 QQRERRHHNRRRR
31 31 A L E -a 7 0A 39 14 24 LLLslLLLLLLLL
32 32 A Q E -a 8 0A 83 14 88 QQHlvHTTTHHHH
33 33 A V E -a 9 0A 59 14 43 VVITIILLLIIII
34 34 A C E -a 10 0A 5 14 86 CCIVPIGGGIIII
35 35 A E S S+ 0 0 143 14 66 EEDDLDSSSDDDD
36 36 A S S S- 0 0 48 14 77 SSQPNQSSSQQQQ
37 37 A G S > S+ 0 0 6 14 84 GGLGPVSSSVVVV
38 38 A E H > S+ 0 0 153 14 37 EEEEEESSSEEEE
39 39 A M H > S+ 0 0 79 14 79 MMDTSEEEEEEEE
40 40 A L H > S+ 0 0 0 14 0 LLLLLLLLLLLLL
41 41 A L H X S+ 0 0 10 14 49 LLVAFILLLIIII
42 42 A E H < S+ 0 0 129 14 71 EEPADPAAAPPPP
43 43 A Y H >< S+ 0 0 37 14 82 YYFVAFNNNFFFF
44 44 A A H >X S+ 0 0 3 14 61 AALLLLIIILLLL
45 45 A Q T 3< S+ 0 0 74 14 67 QQEGQKEEEKKKK
46 46 A T T <4 S+ 0 0 92 14 62 TTDPEAAAAAAAA
47 47 A H T <> + 0 0 80 14 42 HHHRRHQQQHHHH
48 48 A R T < S+ 0 0 107 14 76 RRSQWSKKKSSSS
49 49 A D T 4 S+ 0 0 140 14 19 DDEDEEEEEEEEE
50 50 A Q T 4 S+ 0 0 111 14 81 QQTDDTKKKTTTT
51 51 A I < - 0 0 8 14 18 IIIFLIIIIIIII
52 52 A D S S+ 0 0 43 14 0 DDDDDDDDDDDDD
53 53 A C E -b 7 0A 0 13 17 CCCA.CCCCCCCC
54 54 A L E -bc 8 79A 2 14 33 LLLVGLLLLLLLL
55 55 A I E +bc 9 80A 0 14 27 IIIVVILLLIIII
56 56 A L E - c 0 81A 0 13 32 LL.LLVVVVVVVV
57 57 A V E > - c 0 82A 6 14 83 VVVEIRVVVRRRR
58 58 A A T 3 S+ 0 0 16 14 99 AAKQEEFFFEEEE
59 59 A A T 3 S+ 0 0 81 14 78 AAQSQEHHHEEEE
60 60 A N S < S- 0 0 18 14 86 NNELGAPPPAAAA
61 61 A P S > S+ 0 0 104 14 67 PPPLASSSSSSSS
62 62 A S T >> S+ 0 0 68 14 87 SSSDLILLLIIII
63 63 A F H 3> S+ 0 0 0 14 91 FFIADLQQQLLLL
64 64 A R H <> S+ 0 0 115 13 66 RRL.RPPPPPPPP
65 65 A A H <> S+ 0 0 41 14 98 AAPEHLTTTLLLL
66 66 A V H X S+ 0 0 13 14 68 VVLVGFFFFFFFF
67 67 A V H X S+ 0 0 0 14 90 VVFKLNNNNNNNN
68 68 A Q H X S+ 0 0 86 14 28 QQNEDQQQQQQQQ
69 69 A Q H X S+ 0 0 69 14 71 QQQQQLLLLLLLL
70 70 A L H X>S+ 0 0 1 14 53 LLLLLYYYYYYYY
71 71 A C H <5S+ 0 0 10 14 102 CCYLREEEEEEEE
72 72 A F H <5S+ 0 0 158 14 114 FFEATRGGARRRR
73 73 A E H <5S- 0 0 41 14 56 EEQAQGGGGGGGG
74 74 A G T <5 + 0 0 41 14 72 GGGGGTIIVTTTT
75 75 A V < + 0 0 1 14 37 VVTLMLLLLLLLL
76 76 A V + 0 0 30 14 21 VVLLLLLLLLLLL
77 77 A V - 0 0 4 14 79 VVVFLPPPPPPPP
78 78 A P - 0 0 5 14 62 PPPPPVVVVVVVV
79 79 A A E -c 54 0A 0 13 67 AAVA.IVVVIIII
80 80 A I E -cd 55 104A 0 13 5 IIIV.IIIIIIII
81 81 A V E -cd 56 105A 0 13 16 VVII.VIIIVVVV
82 82 A V E +cd 57 106A 8 13 81 VVFV.EVVVEEEE
83 83 A G S S+ 0 0 23 13 82 GGEG.KAAAKKKK
84 84 A D - 0 0 33 13 38 DDDE.GDDDGGGG
85 85 A R - 0 0 148 12 72 RRK..EKKKEEEE
86 86 A D + 0 0 155 12 47 DDV..DNNNDDDD
87 87 A S - 0 0 69 13 91 SSE.APIIIPPPP
88 88 A E + 0 0 192 13 83 EES.VSTTTSSSS
89 89 A D > - 0 0 73 13 91 DDS.VIAAAIIII
90 90 A P T 3 S+ 0 0 109 13 83 PPD.LAEEGAAAA
91 91 A D T 3 S+ 0 0 128 13 104 DDN.GLTTTLLLL
92 92 A E S < S- 0 0 95 13 79 EEV.DANNNAAAA
93 93 A P + 0 0 76 14 89 PPEVVnDDDnnnn
94 94 A A + 0 0 51 14 64 AAPKTsSSSssss
95 95 A K S > S- 0 0 143 14 66 KKPGGPPPPPPPP
96 96 A E G > S+ 0 0 86 14 62 EETQETTTTTTTT
97 97 A Q G 3 + 0 0 96 14 111 QQFVVFCCCFFFF
98 98 A L G < S- 0 0 14 14 47 LLLDDLLLLLLLL
99 99 A Y S < S- 0 0 0 14 0 YYYYYYYYYYYYY
100 100 A H > - 0 0 0 14 0 HHHHHHHHHHHHH
101 101 A S T 3 S+ 0 0 38 14 29 SSSPDSSSSSSSS
102 102 A A T 3 S+ 0 0 0 14 15 AAAEAAAAAAAAA
103 103 A E < - 0 0 4 14 0 EEEEEEEEEEEEE
104 104 A L E -d 80 0A 25 14 30 LLVLVVLLLVVVV
105 105 A H E -d 81 0A 65 14 55 HHRHHRQQQRRRR
106 106 A L E -d 82 0A 0 14 84 LLYLLHIIIHHHH
107 107 A G > - 0 0 6 14 67 GGRPQGTTTGGGG
108 108 A I G > S+ 0 0 104 14 47 IIVDAVVVVVVVV
109 109 A H G 3 S+ 0 0 156 14 87 HHKDDSKKKSSSS
110 110 A Q G X + 0 0 64 14 27 QQEQQQEEEQQQQ
111 111 A L T < + 0 0 35 14 0 LLLLLLLLLLLLL
112 112 A E T 3 S+ 0 0 117 14 51 EEDAEGDDDGGGG
113 113 A Q <> + 0 0 45 14 66 QQEQQDSSSDDDD
114 114 A L H > S+ 0 0 0 14 36 LLILLVIIIVVVV
115 115 A P H > S+ 0 0 32 14 78 PPQGPQTTTQQQQ
116 116 A Y H > S+ 0 0 129 14 101 YYVYYMSSSMMMM
117 117 A Q H X S+ 0 0 13 14 92 QQTNNTVVVTTTT
118 118 A V H X S+ 0 0 0 14 22 VVIVLIIIIIIII
119 119 A D H X S+ 0 0 72 14 0 DDDDDDDDDDDDD
120 120 A A H X S+ 0 0 36 14 86 AARAARQQQRRRR
121 121 A A H X S+ 0 0 0 14 0 AAAAAAAAAAAAA
122 122 A L H X S+ 0 0 44 14 25 LLIIVIIIIIIII
123 123 A A H X S+ 0 0 48 14 67 AATSLTAAATTTT
124 124 A E H X S+ 0 0 58 14 58 EEKRRKRRRKKKK
125 125 A F H < S+ 0 0 39 14 0 FFFFFFFFFFFFF
126 126 A L H >< S+ 0 0 120 14 0 LLLLLLLLLLLLL
127 127 A R H 3< S+ 0 0 152 13 42 RRHR HHHHHHHH
128 128 A L T 3< S+ 0 0 41 13 23 LLLQ LLLLLLLL
129 129 A A < + 0 0 49 13 35 AAGG GAAAGGGG
130 130 A P S S- 0 0 126 13 17 PPPR PPPPPPPP
131 131 A V - 0 0 16 4 86 VV A
132 132 A E - 0 0 133 4 33 EE D
133 133 A T + 0 0 36 4 66 TA G
134 134 A M 0 0 134 3 0 MM
135 135 A A 0 0 57 3 0 AA
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0.000 0 1.00
2 2 A 20 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 0 0 5 0 0 0.950 31 0.18
3 3 A 0 0 0 0 0 0 0 0 0 0 60 40 0 0 0 0 0 0 0 0 5 0 0 0.673 22 0.32
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 20 0 60 20 0 0 5 0 0 0.950 31 0.31
5 5 A 0 40 60 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.673 22 0.60
6 6 A 20 0 0 0 0 0 0 0 60 0 20 0 0 0 0 0 0 0 0 0 5 0 0 0.950 31 0.16
7 7 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 20 0 0 0 0 80 0 0 0 0 0 0 0 5 0 0 0.500 16 0.51
9 9 A 0 20 60 0 0 0 0 0 20 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.950 31 0.22
10 10 A 0 20 0 0 0 60 20 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.950 31 0.49
11 11 A 67 17 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 6 0 0 0.868 28 0.37
12 12 A 0 0 0 0 0 0 0 17 0 0 17 0 0 0 17 0 0 50 0 0 6 0 0 1.242 41 0.15
13 13 A 0 0 0 0 0 0 0 0 0 0 67 0 0 0 0 0 0 0 17 17 6 0 0 0.868 28 0.40
14 14 A 0 0 0 0 0 0 0 0 0 17 0 50 0 0 0 0 0 33 0 0 6 0 0 1.011 33 0.22
15 15 A 0 17 0 0 0 0 0 0 67 0 0 0 0 17 0 0 0 0 0 0 6 0 0 0.868 28 0.19
16 16 A 0 50 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0.693 23 0.65
17 17 A 17 67 0 0 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 6 0 0 0.868 28 0.41
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 67 17 0 0 6 0 0 0.868 28 0.52
19 19 A 0 17 0 0 0 0 0 0 17 0 17 0 0 0 0 0 0 0 0 50 6 0 0 1.242 41 -0.01
20 20 A 0 17 0 0 0 0 0 0 0 0 0 0 83 0 0 0 0 0 0 0 6 0 0 0.451 15 0.33
21 21 A 0 0 0 0 0 0 0 0 0 0 0 17 0 0 33 0 50 0 0 0 6 0 0 1.011 33 0.18
22 22 A 0 0 0 0 0 0 0 0 0 17 0 0 0 17 50 0 17 0 0 0 6 0 0 1.242 41 0.27
23 23 A 0 0 0 0 0 33 0 0 50 0 0 0 0 17 0 0 0 0 0 0 6 0 0 1.011 33 -0.22
24 24 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.000 0 1.00
25 25 A 0 0 0 0 0 0 0 0 0 9 82 0 0 0 9 0 0 0 0 0 11 0 1 0.600 20 0.60
26 26 A 0 0 0 0 0 0 0 55 45 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.689 22 0.60
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 7 71 14 0 0 0.759 25 0.76
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 14 0 0 0.000 0 1.00
29 29 A 0 0 0 0 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.257 8 0.99
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 50 0 21 7 7 0 14 0 0 1.332 44 0.36
31 31 A 0 93 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 14 0 2 0.257 8 0.76
32 32 A 7 7 0 0 0 0 0 0 0 0 0 21 0 43 0 0 21 0 0 0 14 0 0 1.400 46 0.11
33 33 A 21 21 50 0 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 14 0 0 1.195 39 0.57
34 34 A 7 0 43 0 0 0 0 21 0 7 0 0 21 0 0 0 0 0 0 0 14 0 0 1.400 46 0.14
35 35 A 0 7 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 21 0 50 14 0 0 1.195 39 0.33
36 36 A 0 0 0 0 0 0 0 0 0 7 43 0 0 0 0 0 43 0 7 0 14 0 0 1.103 36 0.23
37 37 A 36 7 0 0 0 0 0 29 0 7 21 0 0 0 0 0 0 0 0 0 14 0 0 1.433 47 0.16
38 38 A 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 79 0 0 14 0 0 0.520 17 0.63
39 39 A 0 0 0 21 0 0 0 0 0 0 7 7 0 0 0 0 0 57 0 7 14 0 0 1.215 40 0.20
40 40 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
41 41 A 7 43 36 0 7 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 14 0 0 1.296 43 0.51
42 42 A 0 0 0 0 0 0 0 0 29 43 0 0 0 0 0 0 0 21 0 7 14 0 0 1.240 41 0.29
43 43 A 7 0 0 0 43 0 21 0 7 0 0 0 0 0 0 0 0 0 21 0 14 0 0 1.400 46 0.17
44 44 A 0 57 21 0 0 0 0 0 21 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.980 32 0.38
45 45 A 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 36 29 29 0 0 14 0 0 1.272 42 0.33
46 46 A 0 0 0 0 0 0 0 0 57 7 0 21 0 0 0 0 0 7 0 7 14 0 0 1.215 40 0.37
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 64 14 0 21 0 0 0 14 0 0 0.892 29 0.58
48 48 A 0 0 0 0 0 7 0 0 0 0 43 0 0 0 21 21 7 0 0 0 14 0 0 1.400 46 0.23
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 0 29 14 0 0 0.598 19 0.81
50 50 A 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 21 21 0 0 14 14 0 0 1.301 43 0.18
51 51 A 0 7 86 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.509 16 0.82
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 14 1 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 8 0 0 0 92 0 0 0 0 0 0 0 13 0 0 0.271 9 0.82
54 54 A 7 86 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.509 16 0.67
55 55 A 14 21 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 1 0 0.892 29 0.73
56 56 A 62 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.666 22 0.68
57 57 A 50 0 7 0 0 0 0 0 0 0 0 0 0 0 36 0 0 7 0 0 14 0 0 1.091 36 0.17
58 58 A 0 0 0 0 21 0 0 0 21 0 0 0 0 0 0 7 7 43 0 0 14 0 0 1.400 46 0.00
59 59 A 0 0 0 0 0 0 0 0 21 0 7 0 0 21 0 0 14 36 0 0 14 0 0 1.494 49 0.21
60 60 A 0 7 0 0 0 0 0 7 36 21 0 0 0 0 0 0 0 7 21 0 14 0 0 1.593 53 0.14
61 61 A 0 7 0 0 0 0 0 0 7 29 57 0 0 0 0 0 0 0 0 0 14 0 0 1.055 35 0.33
62 62 A 0 29 36 0 0 0 0 0 0 0 29 0 0 0 0 0 0 0 0 7 14 0 0 1.272 42 0.12
63 63 A 0 36 7 0 21 0 0 0 7 0 0 0 0 0 0 0 21 0 0 7 14 1 0 1.593 53 0.08
64 64 A 0 8 0 0 0 0 0 0 0 62 0 0 0 0 31 0 0 0 0 0 13 0 0 0.859 28 0.34
65 65 A 0 36 0 0 0 0 0 0 21 7 0 21 0 7 0 0 0 7 0 0 14 0 0 1.593 53 0.01
66 66 A 29 7 0 0 57 0 0 7 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 1.055 35 0.32
67 67 A 21 7 0 0 7 0 0 0 0 0 0 0 0 0 0 7 0 0 57 0 14 0 0 1.215 40 0.10
68 68 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 79 7 7 7 14 0 0 0.755 25 0.71
69 69 A 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0 14 0 0 0.683 22 0.29
70 70 A 0 43 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.683 22 0.47
71 71 A 0 7 0 0 0 0 7 0 0 0 0 0 21 0 7 0 0 57 0 0 14 0 0 1.215 40 -0.02
72 72 A 0 0 0 0 21 0 0 14 14 0 0 7 0 0 36 0 0 7 0 0 14 0 0 1.631 54 -0.15
73 73 A 0 0 0 0 0 0 0 57 7 0 0 0 0 0 0 0 14 21 0 0 14 0 0 1.116 37 0.43
74 74 A 7 0 14 0 0 0 0 43 0 0 0 36 0 0 0 0 0 0 0 0 14 0 0 1.197 39 0.27
75 75 A 21 64 0 7 0 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 14 0 0 0.991 33 0.63
76 76 A 21 79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.520 17 0.79
77 77 A 29 7 0 0 7 0 0 0 0 57 0 0 0 0 0 0 0 0 0 0 14 0 0 1.055 35 0.20
78 78 A 57 0 0 0 0 0 0 0 0 43 0 0 0 0 0 0 0 0 0 0 14 1 0 0.683 22 0.38
79 79 A 31 0 38 0 0 0 0 0 31 0 0 0 0 0 0 0 0 0 0 0 13 0 0 1.093 36 0.33
80 80 A 8 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.271 9 0.94
81 81 A 62 0 38 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.666 22 0.84
82 82 A 54 0 0 0 8 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 13 0 0 0.898 29 0.18
83 83 A 0 0 0 0 0 0 0 31 23 0 0 0 0 0 0 38 0 8 0 0 13 0 0 1.266 42 0.17
84 84 A 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 0 8 0 54 13 1 0 0.898 29 0.62
85 85 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 33 0 42 0 0 12 0 0 1.078 35 0.27
86 86 A 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 67 12 0 0 0.824 27 0.52
87 87 A 0 0 23 0 0 0 0 0 8 38 23 0 0 0 0 0 0 8 0 0 13 0 0 1.439 48 0.09
88 88 A 8 0 0 0 0 0 0 0 0 0 46 23 0 0 0 0 0 23 0 0 13 0 0 1.231 41 0.17
89 89 A 8 0 38 0 0 0 0 0 23 0 8 0 0 0 0 0 0 0 0 23 13 0 0 1.439 48 0.08
90 90 A 0 8 0 0 0 0 0 8 38 23 0 0 0 0 0 0 0 15 0 8 13 0 0 1.586 52 0.17
91 91 A 0 38 0 0 0 0 0 8 0 0 0 23 0 0 0 0 0 0 8 23 13 0 0 1.439 48 -0.05
92 92 A 8 0 0 0 0 0 0 0 38 0 0 0 0 0 0 0 0 23 23 8 13 0 0 1.439 48 0.20
93 93 A 14 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 7 36 21 14 0 5 1.494 49 0.10
94 94 A 0 0 0 0 0 0 0 0 21 7 57 7 0 0 0 7 0 0 0 0 14 0 0 1.215 40 0.35
95 95 A 0 0 0 0 0 0 0 14 0 64 0 0 0 0 0 21 0 0 0 0 14 0 0 0.892 29 0.34
96 96 A 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0 0 7 29 0 0 14 0 0 0.830 27 0.38
97 97 A 14 0 0 0 43 0 0 0 0 0 0 0 21 0 0 0 21 0 0 0 14 0 0 1.301 43 -0.11
98 98 A 0 86 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 14 0 0 0.410 13 0.52
99 99 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
100 100 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 14 0 0 0.000 0 1.00
101 101 A 0 0 0 0 0 0 0 0 0 7 86 0 0 0 0 0 0 0 0 7 14 0 0 0.509 16 0.70
102 102 A 0 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 7 0 0 14 0 0 0.257 8 0.85
103 103 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 14 0 0 0.000 0 1.00
104 104 A 50 50 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.693 23 0.70
105 105 A 0 0 0 0 0 0 0 0 0 0 0 0 0 36 43 0 21 0 0 0 14 0 0 1.061 35 0.44
106 106 A 0 36 21 0 0 0 7 0 0 0 0 0 0 36 0 0 0 0 0 0 14 0 0 1.254 41 0.16
107 107 A 0 0 0 0 0 0 0 57 0 7 0 21 0 0 7 0 7 0 0 0 14 0 0 1.215 40 0.32
108 108 A 64 0 21 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 0 7 14 0 0 0.991 33 0.52
109 109 A 0 0 0 0 0 0 0 0 0 0 36 0 0 21 0 29 0 0 0 14 14 0 0 1.334 44 0.13
110 110 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 29 0 0 14 0 0 0.598 19 0.73
111 111 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
112 112 A 0 0 0 0 0 0 0 36 7 0 0 0 0 0 0 0 0 29 0 29 14 0 0 1.272 42 0.49
113 113 A 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 0 36 7 0 36 14 0 0 1.254 41 0.34
114 114 A 36 36 29 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 1.093 36 0.64
115 115 A 0 0 0 0 0 0 0 7 0 29 0 21 0 0 0 0 43 0 0 0 14 0 0 1.240 41 0.21
116 116 A 7 0 0 36 0 0 36 0 0 0 21 0 0 0 0 0 0 0 0 0 14 0 0 1.254 41 -0.01
117 117 A 21 0 0 0 0 0 0 0 0 0 0 43 0 0 0 0 21 0 14 0 14 0 0 1.301 43 0.08
118 118 A 29 7 64 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.830 27 0.77
119 119 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 14 0 0 0.000 0 1.00
120 120 A 0 0 0 0 0 0 0 0 36 0 0 0 0 0 43 0 21 0 0 0 14 0 0 1.061 35 0.14
121 121 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
122 122 A 7 21 71 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.759 25 0.75
123 123 A 0 7 0 0 0 0 0 0 43 0 7 43 0 0 0 0 0 0 0 0 14 0 0 1.103 36 0.32
124 124 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 36 43 0 21 0 0 14 0 0 1.061 35 0.41
125 125 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
126 126 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0.000 0 1.00
127 127 A 0 0 0 0 0 0 0 0 0 0 0 0 0 69 31 0 0 0 0 0 13 0 0 0.617 20 0.57
128 128 A 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 0 13 0 0 0.271 9 0.76
129 129 A 0 0 0 0 0 0 0 54 46 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0.690 23 0.64
130 130 A 0 0 0 0 0 0 0 0 0 92 0 0 0 0 8 0 0 0 0 0 13 0 0 0.271 9 0.82
131 131 A 75 0 0 0 0 0 0 0 25 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.14
132 132 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 25 4 0 0 0.562 18 0.67
133 133 A 0 0 0 0 0 0 0 25 25 0 0 50 0 0 0 0 0 0 0 0 4 0 0 1.040 34 0.33
134 134 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
135 135 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 22 33 2 sVVl
5 25 27 1 rEa
5 31 34 1 lEv
6 71 75 2 nVEs
10 71 75 2 nVEs
11 71 75 2 nVEs
12 71 75 2 nVEs
13 71 75 2 nVEs
//