Complet list of 1la4 hssp file
Complete list of 1la4.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1LA4
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-03
HEADER TOXIN 28-MAR-02 1LA4
COMPND MOL_ID: 1; MOLECULE: SGTX1; CHAIN: A; SYNONYM: VOLTAGE-GATED POTASSIUM
SOURCE MOL_ID: 1; SYNTHETIC: YES; OTHER_DETAILS: THIS SEQUENCE IS CHEMICALLY
AUTHOR C.W.LEE,S.H.ROH,S.KIM,H.ENDOH,Y.KODERA,T.MAEDA,K.J.SWARTZ, J.I.KIM
DBREF 1LA4 A 1 34 UNP P56855 TX1_SCOGR 1 34
SEQLENGTH 33
NCHAIN 1 chain(s) in 1LA4 data set
NALIGN 80
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : TX1_STRGF 1LA4 1.00 1.00 1 33 1 33 33 0 0 34 P56855 Kappa-theraphotoxin-Scg1a OS=Stromatopelma calceatum griseipes PE=1 SV=1
2 : TX1_HETMC 0.84 0.94 2 33 2 33 32 0 0 35 P60992 Kappa-theraphotoxin-Hm1a OS=Heteroscodra maculata PE=1 SV=1
3 : TXHN2_GRARO 0.83 0.93 2 31 2 31 30 0 0 35 P56853 Kappa-theraphotoxin-Gr1b OS=Grammostola rosea PE=1 SV=1
4 : M5AWR7_GRARO 0.81 0.90 1 31 50 80 31 0 0 85 M5AWR7 HanatoxinII-1 OS=Grammostola rosea PE=3 SV=1
5 : M5AXJ9_GRARO 0.81 0.90 1 31 50 80 31 0 0 85 M5AXJ9 HanatoxinII-2 OS=Grammostola rosea PE=3 SV=1
6 : H7CEK8_GRARO 0.80 0.93 2 31 2 31 30 0 0 36 H7CEK8 Toxin-like peptide (Fragment) OS=Grammostola rosea GN=GTx1-24 PE=2 SV=1
7 : TXHN1_GRARO 1D1H 0.80 0.93 2 31 2 31 30 0 0 35 P56852 Kappa-theraphotoxin-Gr1a OS=Grammostola rosea PE=1 SV=1
8 : M5AWS0_GRARO 0.77 0.87 1 31 50 80 31 0 0 85 M5AWS0 GTx1-2 OS=Grammostola rosea PE=3 SV=1
9 : M5AYA3_GRARO 0.77 0.90 1 31 50 80 31 0 0 85 M5AYA3 HanatoxinI OS=Grammostola rosea PE=3 SV=1
10 : M5AYA8_GRARO 0.77 0.87 1 31 50 80 31 0 0 85 M5AYA8 GTx1-1 OS=Grammostola rosea PE=3 SV=1
11 : TX1_PSACA 0.62 0.78 2 33 3 34 32 0 0 35 P0C244 Tau/kappa-theraphotoxin-Pc1a OS=Psalmopoeus cambridgei PE=1 SV=1
12 : TXG2_CHIGU 0.62 0.78 2 33 2 33 32 0 0 33 P84837 Kappa-theraphotoxin-Pg2a OS=Chilobrachys guangxiensis PE=1 SV=1
13 : B1P1E2_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1E2 Cystine knot toxin OS=Chilobrachys guangxiensis GN=JZTX-XI.4 PE=3 SV=1
14 : JZ11A_CHIGU 2A2V 0.61 0.76 1 33 51 83 33 0 0 86 P0C247 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=2
15 : JZ11B_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1E1 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
16 : JZ11C_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1E0 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
17 : JZ11D_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1D9 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
18 : JZ11E_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1E3 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
19 : JZT29_CHIGU 0.61 0.76 1 33 51 83 33 0 0 86 B1P1E4 Kappa-theraphotoxin-Cj1c OS=Chilobrachys guangxiensis PE=1 SV=1
20 : TX2_PSACA 0.61 0.85 1 33 2 34 33 0 0 35 P0C245 Tau-theraphotoxin-Pc1b OS=Psalmopoeus cambridgei PE=1 SV=1
21 : JZ35A_CHIGU 0.59 0.62 1 31 48 79 32 1 1 83 B1P1F9 U20-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
22 : JZ35B_CHIGU 0.59 0.62 1 31 48 79 32 1 1 83 B1P1F8 U20-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
23 : JZ41A_CHIGU 0.59 0.71 1 33 48 81 34 1 1 84 B1P1G6 U2-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=2 SV=1
24 : JZ41B_CHIGU 0.59 0.71 1 33 48 81 34 1 1 84 B1P1G7 U2-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=2 SV=1
25 : JZT42_CHIGU 0.59 0.71 1 33 19 52 34 1 1 55 B1P1A2 U2-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
26 : H12A1_HAPHA 0.58 0.74 1 31 62 92 31 0 0 97 D2Y2C1 Hainantoxin-XII OS=Haplopelma hainanum PE=2 SV=1
27 : H12A2_HAPHA 0.58 0.74 1 31 62 92 31 0 0 97 D2Y2H6 Hainantoxin-XII.2 OS=Haplopelma hainanum PE=2 SV=1
28 : H12A3_HAPHA 0.58 0.74 1 31 62 92 31 0 0 97 D2Y2H7 Hainantoxin-XII.3 OS=Haplopelma hainanum PE=2 SV=1
29 : H12A4_HAPHA 0.58 0.74 1 31 62 92 31 0 0 97 D2Y2H8 Hainantoxin-XII.4 OS=Haplopelma hainanum PE=2 SV=1
30 : JZT30_CHIGU 0.58 0.76 1 33 51 83 33 0 0 86 B1P1A0 Kappa-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=2 SV=1
31 : JZT36_CHIGU 0.58 0.70 1 33 53 85 33 0 0 88 B1P1D7 U13-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
32 : JZT37_CHIGU 0.58 0.70 1 33 51 83 33 0 0 86 B1P1D8 U13-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=2 SV=1
33 : JZT61_CHIGU 0.58 0.74 1 31 51 81 31 0 0 85 B1P1H1 Kappa-theraphotoxin-Cj1d OS=Chilobrachys guangxiensis PE=2 SV=1
34 : M5AXM9_GRARO 0.58 0.77 1 31 48 78 31 0 0 83 M5AXM9 GTx1-13-1 OS=Grammostola rosea PE=3 SV=1
35 : M5B4R1_GRARO 0.58 0.77 1 31 8 38 31 0 0 43 M5B4R1 GTx1-10 (Fragment) OS=Grammostola rosea PE=2 SV=1
36 : TX482_HYSGI 0.58 0.71 1 31 6 36 31 0 0 41 P56854 Omega-theraphotoxin-Hg1a OS=Hysterocrates gigas PE=1 SV=1
37 : H9C01_HAPHA 0.56 0.69 2 33 52 83 32 0 0 86 D2Y238 Hainantoxin-IX-3 OS=Haplopelma hainanum PE=2 SV=1
38 : JZT33_CHIGU 0.56 0.62 1 31 38 69 32 1 1 74 B1P1F6 U19-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
39 : TX1_STRCF 0.56 0.81 2 33 2 33 32 0 0 34 P60991 Kappa-theraphotoxin-Sc1a OS=Stromatopelma calceatum PE=1 SV=1
40 : B3FIU4_HAPSC 0.55 0.67 1 33 51 83 33 0 0 86 B3FIU4 HWTX-V OS=Haplopelma schmidti PE=3 SV=1
41 : H7CEK6_GRARO 0.55 0.67 1 33 51 83 33 0 0 86 H7CEK6 Toxin-like peptide OS=Grammostola rosea GN=GTx1-21 PE=3 SV=1
42 : H9A01_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y236 Hainantoxin-IX OS=Haplopelma hainanum PE=1 SV=1
43 : H9A02_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y2E8 Hainantoxin-IX.2 OS=Haplopelma hainanum PE=1 SV=1
44 : H9A03_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y2E9 Hainantoxin-IX.3 OS=Haplopelma hainanum PE=1 SV=1
45 : H9A04_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y2F0 Hainantoxin-IX.4 OS=Haplopelma hainanum PE=1 SV=1
46 : H9B01_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y237 Hainantoxin-IX-2 OS=Haplopelma hainanum PE=1 SV=1
47 : H9B02_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y239 Hainantoxin-IX-2.2 OS=Haplopelma hainanum PE=1 SV=1
48 : H9B03_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y2L7 Hainantoxin-IX-2.3 OS=Haplopelma hainanum PE=1 SV=1
49 : H9D01_HAPHA 0.55 0.67 1 33 51 83 33 0 0 86 D2Y2F1 Hainantoxin-IX-4 OS=Haplopelma hainanum PE=2 SV=1
50 : TXH5_HAPSC 0.55 0.67 1 33 51 83 33 0 0 86 P61104 Omega-theraphotoxin-Hh2a OS=Haplopelma schmidti PE=1 SV=2
51 : JZ38A_CHIGU 0.53 0.62 1 31 48 79 32 1 1 84 B1P1G2 U21-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
52 : JZ38B_CHIGU 0.53 0.62 1 31 48 79 32 1 1 84 B1P1G0 U21-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
53 : JZ38C_CHIGU 0.53 0.62 1 31 48 79 32 1 1 84 B1P1G3 U21-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
54 : JZ38D_CHIGU 0.53 0.62 1 31 48 79 32 1 1 105 B1P1G1 U21-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
55 : JZT34_CHIGU 0.53 0.59 1 31 51 82 32 1 1 87 B1P1F7 Mu-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
56 : JZT39_CHIGU 0.53 0.62 1 31 48 79 32 1 1 84 B1P1G4 U21-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=1 SV=1
57 : JZT40_CHIGU 0.53 0.62 1 31 48 79 32 1 1 84 B1P1G5 U21-theraphotoxin-Cj1c OS=Chilobrachys guangxiensis PE=2 SV=1
58 : M5B4R0_GRARO 0.53 0.65 1 33 50 83 34 1 1 86 M5B4R0 GTx1-7 OS=Grammostola rosea PE=3 SV=1
59 : TXPR1_THRPR 0.53 0.59 2 33 2 33 32 0 0 35 P83480 Beta-theraphotoxin-Tp1a OS=Thrixopelma pruriens PE=1 SV=1
60 : D5J6X1_PELMU 0.52 0.73 1 33 51 83 33 0 0 84 D5J6X1 Putative mature peptide toxin-like GVDKE OS=Pelinobius muticus PE=3 SV=1
61 : D5J6X4_PELMU 0.52 0.73 1 33 51 83 33 0 0 84 D5J6X4 Putative mature peptide toxin-like GVDKE OS=Pelinobius muticus PE=3 SV=1
62 : H9E01_HAPHA 0.52 0.64 1 33 51 83 33 0 0 86 D2Y2L5 Hainantoxin-IX-5 OS=Haplopelma hainanum PE=3 SV=1
63 : H9F01_HAPHA 0.52 0.64 1 33 51 83 33 0 0 86 D2Y2L8 Hainantoxin-IX-6 OS=Haplopelma hainanum PE=3 SV=1
64 : JZ521_CHIGU 0.52 0.74 2 31 2 32 31 1 1 35 P0CH51 Jingzhaotoxin F5-21.66 OS=Chilobrachys guangxiensis PE=1 SV=1
65 : JZTX9_CHIGU 0.52 0.67 2 33 2 34 33 1 1 35 P0CH44 Jingzhaotoxin-9 OS=Chilobrachys guangxiensis PE=1 SV=1
66 : M5AXK5_GRARO 0.52 0.58 1 31 51 81 31 0 0 86 M5AXK5 GTx1-3 OS=Grammostola rosea PE=3 SV=1
67 : TX3_CERMR 0.52 0.61 1 33 6 38 33 0 0 39 P84509 Beta-theraphotoxin-Cm2a OS=Ceratogyrus marshalli PE=1 SV=1
68 : JZT32_CHIGU 0.50 0.65 1 33 50 83 34 1 1 86 B1P1F5 U18-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
69 : TX3_PSACA 0.50 0.66 2 33 2 33 32 0 0 34 P0C246 Tau-theraphotoxin-Pc1c OS=Psalmopoeus cambridgei PE=1 SV=1
70 : W4VS49_9ARAC 0.49 0.62 1 31 56 92 37 1 6 98 W4VS49 Tri-ick-5 OS=Trittame loki PE=3 SV=1
71 : W4VSI9_9ARAC 0.49 0.59 1 33 56 94 39 1 6 98 W4VSI9 Tri-ick-3 OS=Trittame loki PE=3 SV=1
72 : H7A01_HAPHA 0.48 0.61 1 31 50 80 31 0 0 85 D2Y2C3 Hainantoxin-VII OS=Haplopelma hainanum PE=1 SV=1
73 : H7CEK7_GRARO 0.48 0.67 1 33 48 80 33 0 0 83 H7CEK7 Toxin-like peptide OS=Grammostola rosea GN=GTx1-22 PE=3 SV=1
74 : J7HBS6_9DIPT 0.48 0.55 1 33 38 69 33 1 1 70 J7HBS6 Salivary toxin-like peptide OS=Lutzomyia intermedia PE=3 SV=1
75 : JZ31A_CHIGU 0.48 0.67 1 33 51 83 33 0 0 86 B1P1F4 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
76 : JZ31B_CHIGU 0.48 0.67 1 33 51 83 33 0 0 86 B1P1F3 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
77 : JZ31C_CHIGU 0.48 0.67 1 33 51 83 33 0 0 86 P0CH56 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
78 : JZT44_CHIGU 0.48 0.64 1 33 52 84 33 0 0 86 B1P1G8 U22-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
79 : J7HBT6_9DIPT 0.47 0.65 1 33 20 52 34 2 2 64 J7HBT6 SP13 phlebotomine family member OS=Lutzomyia intermedia PE=4 SV=1
80 : WGRTX_GRARO 1KOZ 0.46 0.60 1 33 50 84 35 1 2 87 P60590 Omega-theraphotoxin-Gr1a OS=Grammostola rosea PE=1 SV=2
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A T 0 0 185 69 35 T EE EEE EEEEEEEADDEEEGGGGEDEEDDG E EEEEEEEEEEEEEEEAEEE GGEE EGE G
2 2 A a - 0 0 47 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
3 3 A R B -a 15 0A 102 81 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRTRRRRRRRRRRRRRRRRRRTRKKRRKTKRTRR
4 4 A Y > - 0 0 153 81 68 YYYYYYYYYYWKKKKKKKKWAAWWWYYYYKKKKKKYWYRWYWWWWWWWWWWWWWEWWKYYYWWKKYKKWK
5 5 A L T 3 S+ 0 0 53 81 42 LLLLLLLLLLFMMMMMMMMFLLMMMFFFFMMMMFFMYLMYYYYYYYYYYYLLLLWLLFWMMYYLLYLLYL
6 6 A F T 3 S+ 0 0 146 81 16 FFFFFFFFFFMFFFFFFFFLYYFFFLLLLFFFFLLFLMFLLLLLLLLLLLFFFFLFFWLFFLLFLWLLLF
7 7 A G E < -B 28 0B 9 81 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
8 8 A G E +B 27 0B 63 81 35 GGGGGGGGGGGGGGGGGGGGGGGGGEEEEGGGGAAGGGAGGGGGGGGGGGGGGGGGGWGSSEGGGKGGGG
9 9 A b - 0 0 4 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A K S S+ 0 0 162 81 66 KSKKKKKEKKDSSSSSSSSKTTTTTKKKKTSSSTTSSSRSKSSSSSSSSSEEEESEEKSGGSSTTETTKV
11 11 A T S > S- 0 0 77 81 79 TSTTTTTTTTSVVVVVVVVSKKTTTKKKKVKKVQQVQKRQKQQQQQQQQQKKKKKKKQAKKQQTKKIKEG
12 12 A T G > S+ 0 0 84 81 53 TTTTTTTTTTTDDDDDDDHTDDDDDTTTTHHHDTTNDDDDDDDDDDDDDDDDDDDDDDGSSDDSDNDDDD
13 13 A A G 3 S+ 0 0 98 81 51 ASAAAPSASSLSSSSSSSSSEESSSSSSSSEESSSDGGSGSGGGGGGGGGSSSSASSSQDDGGSSSDSSG
14 14 A D G < S+ 0 0 57 81 15 DDDDDDDDDDDDDDDDDDDDDDDDDEEEEDDDDDDDDDDDEDDDDDDDDDDDDDDDDETDDDDEEDDEED
15 15 A c B < S-a 3 0A 10 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
16 16 A a - 0 0 18 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A K S S+ 0 0 172 81 70 KKKKKKKKKKKAAAAAAAAEKKEEEEEEEAAAAKKPKEPKTKKKKKKKKKEEEEAEEEKPPKKAPKPPEL
18 18 A H S S+ 0 0 107 81 11 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHRHHHHHHHHHHHHHHHHHHHHHHHKKHHHHHHHHH
19 19 A L - 0 0 12 81 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
20 20 A A - 0 0 19 81 61 ASGGGGGGGVSGGGGGGGGSAAGGGAAAAGAAGAAGQVGQQQQQQQQQQQGGGGEGGGVAAQQGGQGGQG
21 21 A b E -C 28 0B 11 81 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCRCCCCCCC
22 22 A R E > -C 27 0B 117 80 59 RRKKKKKKKKKKKKKKKKKKRRRRRHHHHKKKKHHHHRKHHHHHHHHHHHRRRRRRRRSKKHHKRENRHK
23 23 A S T 5S+ 0 0 110 81 87 SSFFFFFFFFMPPPPPPPPMRRWWWDDDDPRRPNNSSTPSSSSSSSSSSSRRRrKRRSRRRSSQKSKKSt
24 24 A D T 5S- 0 0 127 81 83 DDRRRRRRRRGTTTTTTTTGTTEEEKKKKTTTTKKLNKTNYNNNNNNNNNAAAkKATKRTTNNKKYKKYa
25 25 A G T 5S- 0 0 62 81 89 GWDDDDDDDDLLLLLLLLLLLLKKKHHHHLFFLHHFYWSYWYYYYYYYYYKKKPWKKWHFFYYWWWYWWD
26 26 A K T 5S+ 0 0 116 81 79 KKKKKKKKKKYKKKKKKKKDPPPPPKKKKKNNKKKSEPKEEEEEEEEEEEPPPSPPPPGNNEEPPKWPEP
27 27 A Y E < -BC 8 22B 63 81 43 YYYYYYYYYYYYYYYYYYYYttsssWWWWYYYYWWYWyYWWWWWWWWWWWsssWyssyWYYWWfyWHyWY
28 28 A c E +BC 7 21B 0 80 0 CCCCCCCCCCCCCCCCCCCCcccccCCCCCCCCCCCCcCCCCCCCCCCCCcccCccccCCCCCccCCcCC
29 29 A A - 0 0 14 81 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVAVIIIIIVVVIVGGGGVGGAVAAIIAGIGGLA
30 30 A W - 0 0 114 81 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
31 31 A D - 0 0 155 81 1 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
32 32 A G 0 0 56 51 0 GG GGGGGGGGGG GGG GGG G GGGGGGGGGGGG GGGGGG G GGG
33 33 A T 0 0 181 51 28 TT TTTTTTTTTT TTT TSS T TTTTTTTTTTTT TTSSTT T TTS
## ALIGNMENTS 71 - 80
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A T 0 0 185 69 35 DEDTEEEEGD
2 2 A a - 0 0 47 81 0 CCCCCCCCCC
3 3 A R B -a 15 0A 102 81 27 RRRRTTTKRV
4 4 A Y > - 0 0 153 81 68 AYKYKKKWYR
5 5 A L T 3 S+ 0 0 53 81 42 MWFLFFFYLF
6 6 A F T 3 S+ 0 0 146 81 16 FLLFLLLLFW
7 7 A G E < -B 28 0B 9 81 2 GGGGGGGGSG
8 8 A G E +B 27 0B 63 81 35 GTGWGGGDPK
9 9 A b - 0 0 4 81 0 CCCCCCCCCC
10 10 A K S S+ 0 0 162 81 66 GSDGSSSKGS
11 11 A T S > S- 0 0 77 81 79 EKQNEEEAGQ
12 12 A T G > S+ 0 0 84 81 53 DTDGDDDHnT
13 13 A A G 3 S+ 0 0 98 81 51 NGSESSSEgS
14 14 A D G < S+ 0 0 57 81 15 DDNKEEEDDD
15 15 A c B < S-a 3 0A 10 81 0 CCCCCCCCCC
16 16 A a - 0 0 18 81 0 CCCCCCCCCC
17 17 A K S S+ 0 0 172 81 70 LSEPPPPEKP
18 18 A H S S+ 0 0 107 81 11 HHHHHHHHSH
19 19 A L - 0 0 12 81 0 LLLLLLLLLL
20 20 A A - 0 0 19 81 61 GSVGGGGRYA
21 21 A b E -C 28 0B 11 81 2 CCCCCCCCCC
22 22 A R E > -C 27 0B 117 80 59 KSHGKKKH.K
23 23 A S T 5S+ 0 0 110 81 87 tPNGDDDSTs
24 24 A D T 5S- 0 0 127 81 83 aKKMVVVRSp
25 25 A G T 5S- 0 0 62 81 89 NHHLLLLWSR
26 26 A K T 5S+ 0 0 116 81 79 PGKFYYYDDN
27 27 A Y E < -BC 8 22B 63 81 43 YWWCYYYWFI
28 28 A c E +BC 7 21B 0 80 0 CCC.CCCCCC
29 29 A A - 0 0 14 81 54 AVVVAAAIAV
30 30 A W - 0 0 114 81 0 WWWWWWWWWW
31 31 A D - 0 0 155 81 1 DDDDDDDDND
32 32 A G 0 0 56 51 0 G GGGGGGGG
33 33 A T 0 0 181 51 28 T TKTTTTNS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 14 3 0 0 4 0 0 0 0 0 67 0 12 69 0 0 1.039 34 0.65
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
3 3 A 1 0 0 0 0 0 0 0 0 0 0 9 0 0 83 7 0 0 0 0 81 0 0 0.616 20 0.72
4 4 A 0 0 0 0 0 32 31 0 4 0 0 0 0 0 2 30 0 1 0 0 81 0 0 1.356 45 0.31
5 5 A 0 33 0 25 17 4 21 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.465 48 0.57
6 6 A 0 41 0 2 51 4 2 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.015 33 0.83
7 7 A 0 0 0 0 0 0 0 99 0 0 1 0 0 0 0 0 0 0 0 0 81 0 0 0.067 2 0.98
8 8 A 0 0 0 0 0 2 0 79 4 1 2 1 0 0 0 2 0 6 0 1 81 0 0 0.917 30 0.64
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
10 10 A 1 0 0 0 0 0 0 6 0 0 42 15 0 0 1 22 0 10 0 2 81 0 0 1.582 52 0.34
11 11 A 14 0 1 0 0 0 0 2 2 0 4 17 0 0 1 28 22 6 1 0 81 0 0 1.906 63 0.21
12 12 A 0 0 0 0 0 0 0 2 0 0 4 26 0 6 0 0 0 0 4 58 81 0 1 1.173 39 0.47
13 13 A 0 1 0 0 0 0 0 21 9 1 53 0 0 0 0 0 1 7 1 5 81 0 0 1.434 47 0.48
14 14 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 16 1 80 81 0 0 0.633 21 0.84
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
17 17 A 0 2 0 0 0 0 0 0 17 15 1 1 0 0 0 40 0 23 0 0 81 0 0 1.493 49 0.29
18 18 A 0 0 0 0 0 0 0 0 0 0 1 0 0 95 1 2 0 0 0 0 81 0 0 0.248 8 0.89
19 19 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
20 20 A 5 0 0 0 0 0 1 48 19 0 5 0 0 0 1 0 20 1 0 0 81 0 0 1.444 48 0.38
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 0 0 81 1 0 0.067 2 0.97
22 22 A 0 0 0 0 0 0 0 1 0 0 3 0 0 30 24 40 0 1 1 0 80 0 0 1.326 44 0.41
23 23 A 0 0 0 2 10 4 0 1 0 15 28 5 0 0 16 5 1 0 4 9 81 0 4 2.115 70 0.13
24 24 A 4 1 0 1 0 0 4 2 7 1 1 22 0 0 12 20 0 4 16 4 81 0 0 2.196 73 0.16
25 25 A 0 22 0 0 6 14 17 2 0 1 2 0 0 11 1 10 0 0 1 11 81 0 0 2.143 71 0.11
26 26 A 0 0 0 0 1 1 5 2 0 22 2 0 0 0 0 37 0 19 6 4 81 0 0 1.748 58 0.20
27 27 A 0 0 1 0 2 33 48 0 0 0 10 2 1 1 0 0 0 0 0 0 81 1 16 1.292 43 0.56
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 80 0 0 0.000 0 1.00
29 29 A 16 1 12 0 0 0 0 11 59 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.160 38 0.46
30 30 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 99 81 0 0 0.067 2 0.98
32 32 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 12 84 0 0 0 2 0 0 2 0 51 0 0 0.550 18 0.71
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
21 28 75 1 tYc
22 28 75 1 tYc
23 28 75 1 sWc
24 28 75 1 sWc
25 28 46 1 sWc
38 28 65 1 yHc
51 28 75 1 sWc
52 28 75 1 sWc
53 28 75 1 sWc
54 24 71 1 rAk
55 28 78 1 yHc
56 28 75 1 sWc
57 28 75 1 sWc
58 28 77 1 yLc
64 27 28 1 fYc
65 27 28 1 yHc
68 28 77 1 yHc
70 24 79 6 tRKLPPFa
71 24 79 6 tTKLPPFa
79 13 32 1 nHg
80 24 73 2 sKWp
//