Complet list of 1l8y hssp file
Complete list of 1l8y.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1L8Y
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-03
HEADER DNA BINDING PROTEIN 22-MAR-02 1L8Y
COMPND MOL_ID: 1; MOLECULE: UPSTREAM BINDING FACTOR 1; CHAIN: A; FRAGMENT: HM
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR W.YANG,Y.XU,J.WU,W.ZENG,Y.SHI
DBREF 1L8Y A 1 82 UNP P17480 UBF1_HUMAN 479 560
SEQLENGTH 83
NCHAIN 1 chain(s) in 1L8Y data set
NALIGN 123
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : H2R3C7_PANTR 1.00 1.00 1 64 479 542 64 0 0 542 H2R3C7 Uncharacterized protein OS=Pan troglodytes GN=UBTF PE=4 SV=1
2 : A2AWT5_MOUSE 0.99 1.00 1 83 479 561 83 0 0 764 A2AWT5 Nucleolar transcription factor 1 OS=Mus musculus GN=Ubtf PE=4 SV=1
3 : A2AWT6_MOUSE 0.99 1.00 1 83 442 524 83 0 0 727 A2AWT6 Nucleolar transcription factor 1 OS=Mus musculus GN=Ubtf PE=4 SV=1
4 : A2AWT7_MOUSE 0.99 1.00 1 83 442 524 83 0 0 752 A2AWT7 Nucleolar transcription factor 1 OS=Mus musculus GN=Ubtf PE=4 SV=1
5 : A8K962_HUMAN 0.99 1.00 1 83 479 561 83 0 0 764 A8K962 cDNA FLJ77827, highly similar to Human upstream binding factor (hUBF) OS=Homo sapiens PE=2 SV=1
6 : B4DLB0_HUMAN 0.99 1.00 1 83 220 302 83 0 0 505 B4DLB0 Upstream binding transcription factor, RNA polymerase I, isoform CRA_a OS=Homo sapiens GN=UBTF PE=2 SV=1
7 : B4DNQ1_HUMAN 0.99 1.00 1 83 376 458 83 0 0 661 B4DNQ1 cDNA FLJ53818, highly similar to Nucleolar transcription factor 1 OS=Homo sapiens PE=2 SV=1
8 : E9PKP7_HUMAN 0.99 1.00 1 83 442 524 83 0 0 745 E9PKP7 Nucleolar transcription factor 1 OS=Homo sapiens GN=UBTF PE=2 SV=1
9 : E9PLT2_HUMAN 0.99 1.00 1 83 66 148 83 0 0 194 E9PLT2 Nucleolar transcription factor 1 (Fragment) OS=Homo sapiens GN=UBTF PE=2 SV=1
10 : F7CDV4_CALJA 0.99 1.00 1 83 478 560 83 0 0 763 F7CDV4 Uncharacterized protein OS=Callithrix jacchus GN=UBTF PE=4 SV=1
11 : F7GIR0_CALJA 0.99 1.00 1 83 478 560 83 0 0 763 F7GIR0 Uncharacterized protein OS=Callithrix jacchus GN=UBTF PE=4 SV=1
12 : F7GNN8_MACMU 0.99 1.00 1 83 375 457 83 0 0 660 F7GNN8 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=UBTF PE=4 SV=1
13 : F7GQK1_CALJA 0.99 1.00 1 83 478 560 83 0 0 763 F7GQK1 Uncharacterized protein OS=Callithrix jacchus GN=UBTF PE=4 SV=1
14 : F7H0V6_CALJA 0.99 1.00 1 83 441 523 83 0 0 726 F7H0V6 Uncharacterized protein OS=Callithrix jacchus GN=UBTF PE=4 SV=1
15 : G1R0D7_NOMLE 0.99 1.00 1 83 479 561 83 0 0 763 G1R0D7 Uncharacterized protein OS=Nomascus leucogenys GN=UBTF PE=4 SV=1
16 : G3HLJ8_CRIGR 0.99 1.00 1 83 442 524 83 0 0 727 G3HLJ8 Nucleolar transcription factor 1 OS=Cricetulus griseus GN=I79_011588 PE=4 SV=1
17 : G3R5V7_GORGO 0.99 1.00 1 83 479 561 83 0 0 764 G3R5V7 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101129769 PE=4 SV=1
18 : G3RUE2_GORGO 0.99 1.00 1 83 479 561 83 0 0 764 G3RUE2 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101129769 PE=4 SV=1
19 : G7NIX4_MACMU 0.99 1.00 1 83 479 561 83 0 0 764 G7NIX4 Nucleolar transcription factor 1 isoform a OS=Macaca mulatta GN=UBTF PE=2 SV=1
20 : G7PUZ4_MACFA 0.99 1.00 1 83 479 561 83 0 0 764 G7PUZ4 Upstream-binding factor 1 OS=Macaca fascicularis GN=EGM_07987 PE=4 SV=1
21 : H0Y0Q7_OTOGA 0.99 1.00 1 83 479 561 83 0 0 764 H0Y0Q7 Uncharacterized protein OS=Otolemur garnettii GN=UBTF PE=4 SV=1
22 : H2NTU9_PONAB 0.99 1.00 1 83 479 561 83 0 0 764 H2NTU9 Uncharacterized protein OS=Pongo abelii GN=UBTF PE=4 SV=1
23 : H9FZB2_MACMU 0.99 1.00 1 83 442 524 83 0 0 727 H9FZB2 Nucleolar transcription factor 1 isoform b OS=Macaca mulatta GN=UBTF PE=2 SV=1
24 : I0FUU3_MACMU 0.99 1.00 1 83 442 524 83 0 0 727 I0FUU3 Nucleolar transcription factor 1 isoform b OS=Macaca mulatta GN=UBTF PE=2 SV=1
25 : I0FUU4_MACMU 0.99 1.00 1 83 479 561 83 0 0 764 I0FUU4 Nucleolar transcription factor 1 isoform a OS=Macaca mulatta GN=UBTF PE=2 SV=1
26 : I3NE87_SPETR 0.99 1.00 1 83 479 561 83 0 0 764 I3NE87 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=UBTF PE=4 SV=1
27 : I7GE45_MACFA 0.99 1.00 1 83 167 249 83 0 0 452 I7GE45 Macaca fascicularis brain cDNA clone: QmoA-10959, similar to human upstream binding transcription factor, RNA polymerase I(UBTF), mRNA, RefSeq: NM_014233.1 OS=Macaca fascicularis PE=2 SV=1
28 : K7B7K3_PANTR 0.99 1.00 1 83 479 561 83 0 0 764 K7B7K3 Upstream binding transcription factor, RNA polymerase I OS=Pan troglodytes GN=UBTF PE=2 SV=1
29 : K7CPC0_PANTR 0.99 1.00 1 83 442 524 83 0 0 727 K7CPC0 Upstream binding transcription factor, RNA polymerase I OS=Pan troglodytes GN=UBTF PE=2 SV=1
30 : K7ESR7_PONAB 0.99 1.00 1 83 442 524 83 0 0 727 K7ESR7 Uncharacterized protein OS=Pongo abelii GN=UBTF PE=4 SV=1
31 : L8Y4N5_TUPCH 0.99 1.00 1 83 488 570 83 0 0 806 L8Y4N5 Nucleolar transcription factor 1 OS=Tupaia chinensis GN=TREES_T100018265 PE=4 SV=1
32 : O00164_HUMAN 0.99 1.00 1 83 321 403 83 0 0 654 O00164 Ribosomal RNA upstream binding transcription factor (Fragment) OS=Homo sapiens GN=UBTF PE=4 SV=1
33 : Q4R4K4_MACFA 0.99 1.00 1 83 115 197 83 0 0 400 Q4R4K4 Brain cDNA, clone: QnpA-17735, similar to human upstream binding transcription factor, RNA polymeraseI (UBTF), OS=Macaca fascicularis PE=2 SV=1
34 : Q60459_CRIGR 0.99 1.00 1 83 479 561 83 0 0 764 Q60459 UBF1 protein OS=Cricetulus griseus GN=UBF1 PE=2 SV=1
35 : Q60460_CRIGR 0.99 1.00 1 83 442 524 83 0 0 727 Q60460 UBF2 protein OS=Cricetulus griseus GN=UBF2 PE=2 SV=1
36 : Q9DBH1_MOUSE 0.99 1.00 1 83 442 524 83 0 0 752 Q9DBH1 Putative uncharacterized protein OS=Mus musculus GN=Ubtf PE=2 SV=1
37 : U3CL59_CALJA 0.99 1.00 1 83 442 524 83 0 0 727 U3CL59 Nucleolar transcription factor 1 isoform b OS=Callithrix jacchus GN=UBTF PE=2 SV=1
38 : U3DN24_CALJA 0.99 1.00 1 83 479 561 83 0 0 764 U3DN24 Nucleolar transcription factor 1 isoform a OS=Callithrix jacchus GN=UBTF PE=2 SV=1
39 : U3F7Z0_CALJA 0.99 1.00 1 83 442 524 83 0 0 727 U3F7Z0 Nucleolar transcription factor 1 isoform b OS=Callithrix jacchus GN=UBTF PE=2 SV=1
40 : U3FAY1_CALJA 0.99 1.00 1 83 479 561 83 0 0 764 U3FAY1 Nucleolar transcription factor 1 isoform a OS=Callithrix jacchus GN=UBTF PE=2 SV=1
41 : UBF1_HUMAN 0.99 1.00 1 83 479 561 83 0 0 764 P17480 Nucleolar transcription factor 1 OS=Homo sapiens GN=UBTF PE=1 SV=1
42 : UBF1_MOUSE 0.99 1.00 1 83 479 561 83 0 0 765 P25976 Nucleolar transcription factor 1 OS=Mus musculus GN=Ubtf PE=1 SV=1
43 : UBF1_RAT 0.99 1.00 1 83 479 561 83 0 0 764 P25977 Nucleolar transcription factor 1 OS=Rattus norvegicus GN=Ubtf PE=1 SV=1
44 : D2HCV2_AILME 0.98 1.00 1 83 460 542 83 0 0 749 D2HCV2 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_008449 PE=4 SV=1
45 : F1RQY4_PIG 0.98 1.00 1 83 479 561 83 0 0 644 F1RQY4 Uncharacterized protein OS=Sus scrofa GN=UBTF PE=4 SV=2
46 : G1MJ50_AILME 0.98 1.00 1 83 479 561 83 0 0 764 G1MJ50 Uncharacterized protein OS=Ailuropoda melanoleuca GN=UBTF PE=4 SV=1
47 : G1NWL9_MYOLU 0.98 1.00 1 83 483 565 83 0 0 768 G1NWL9 Uncharacterized protein OS=Myotis lucifugus GN=UBTF PE=4 SV=1
48 : G1TKL9_RABIT 0.98 1.00 1 83 479 561 83 0 0 764 G1TKL9 Uncharacterized protein OS=Oryctolagus cuniculus GN=UBTF PE=4 SV=1
49 : G3UFA3_LOXAF 0.98 1.00 1 83 479 561 83 0 0 745 G3UFA3 Uncharacterized protein OS=Loxodonta africana GN=UBTF PE=4 SV=1
50 : G3UHW6_LOXAF 0.98 1.00 1 83 479 561 83 0 0 764 G3UHW6 Uncharacterized protein OS=Loxodonta africana GN=UBTF PE=4 SV=1
51 : G9KWE9_MUSPF 0.98 1.00 1 83 177 259 83 0 0 373 G9KWE9 Upstream binding transcription factor, RNA polymerase I (Fragment) OS=Mustela putorius furo PE=2 SV=1
52 : H0VDQ5_CAVPO 0.98 1.00 1 83 478 560 83 0 0 756 H0VDQ5 Uncharacterized protein OS=Cavia porcellus GN=UBTF PE=4 SV=1
53 : L5KRT8_PTEAL 0.98 1.00 1 83 479 561 83 0 0 725 L5KRT8 Nucleolar transcription factor 1 OS=Pteropus alecto GN=PAL_GLEAN10004236 PE=4 SV=1
54 : M3VZM3_FELCA 0.98 1.00 1 83 479 561 83 0 0 764 M3VZM3 Uncharacterized protein OS=Felis catus GN=UBTF PE=4 SV=1
55 : M3YDH4_MUSPF 0.98 1.00 1 83 479 561 83 0 0 764 M3YDH4 Uncharacterized protein OS=Mustela putorius furo GN=UBTF PE=4 SV=1
56 : S7PE83_MYOBR 0.98 1.00 1 83 220 302 83 0 0 483 S7PE83 Nucleolar transcription factor 1 OS=Myotis brandtii GN=D623_10009484 PE=4 SV=1
57 : S9XES7_9CETA 0.98 1.00 1 83 548 630 83 0 0 1185 S9XES7 Uncharacterized protein OS=Camelus ferus GN=CB1_000148001 PE=3 SV=1
58 : E2RRM0_CANFA 0.96 1.00 1 83 450 532 83 0 0 735 E2RRM0 Uncharacterized protein OS=Canis familiaris GN=UBTF PE=4 SV=2
59 : F7DY73_HORSE 0.96 1.00 1 83 456 538 83 0 0 741 F7DY73 Uncharacterized protein OS=Equus caballus GN=UBTF PE=4 SV=1
60 : K9INE9_DESRO 0.96 0.99 1 83 442 524 83 0 0 727 K9INE9 Putative nucleolar transcription factor 1 OS=Desmodus rotundus PE=2 SV=1
61 : K9INN8_DESRO 0.96 0.99 1 83 479 561 83 0 0 764 K9INN8 Putative nucleolar transcription factor 1 OS=Desmodus rotundus PE=2 SV=1
62 : F1MCZ7_BOVIN 0.95 0.98 1 83 472 554 83 0 0 757 F1MCZ7 Uncharacterized protein OS=Bos taurus GN=UBTF PE=4 SV=2
63 : F7DF94_MONDO 0.95 0.99 1 83 479 561 83 0 0 763 F7DF94 Uncharacterized protein OS=Monodelphis domestica GN=UBTF PE=4 SV=1
64 : L8HWG7_9CETA 0.95 0.98 1 83 472 554 83 0 0 757 L8HWG7 Nucleolar transcription factor 1 OS=Bos mutus GN=M91_07981 PE=4 SV=1
65 : W5PCE5_SHEEP 0.95 0.98 1 83 436 518 83 0 0 721 W5PCE5 Uncharacterized protein OS=Ovis aries GN=UBTF PE=4 SV=1
66 : G3WRV8_SARHA 0.94 0.99 1 83 479 561 83 0 0 763 G3WRV8 Uncharacterized protein OS=Sarcophilus harrisii GN=UBTF PE=4 SV=1
67 : R7VTU6_COLLI 0.93 0.94 1 81 479 559 81 0 0 755 R7VTU6 Nucleolar transcription factor 1 OS=Columba livia GN=A306_03885 PE=4 SV=1
68 : H0YUG9_TAEGU 0.92 0.95 1 83 476 558 83 0 0 720 H0YUG9 Uncharacterized protein OS=Taeniopygia guttata GN=UBTF PE=4 SV=1
69 : H9H0E3_MELGA 0.92 0.95 1 83 115 197 83 0 0 321 H9H0E3 Uncharacterized protein OS=Meleagris gallopavo GN=UBTF PE=4 SV=1
70 : H9H0E4_MELGA 0.92 0.95 1 83 259 341 83 0 0 465 H9H0E4 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=UBTF PE=4 SV=1
71 : U3JFS1_FICAL 0.92 0.95 1 83 479 561 83 0 0 760 U3JFS1 Uncharacterized protein OS=Ficedula albicollis GN=UBTF PE=4 SV=1
72 : U3F634_MICFL 0.90 0.95 1 83 479 561 83 0 0 760 U3F634 Nucleolar transcription factor 1 OS=Micrurus fulvius PE=2 SV=1
73 : V8NRC0_OPHHA 0.90 0.95 1 83 479 561 83 0 0 760 V8NRC0 Nucleolar transcription factor 1 OS=Ophiophagus hannah GN=UBTF PE=4 SV=1
74 : M7C032_CHEMY 0.89 0.95 1 83 459 541 83 0 0 959 M7C032 Nucleolar transcription factor 1 (Fragment) OS=Chelonia mydas GN=UY3_09030 PE=3 SV=1
75 : G1KTM9_ANOCA 0.86 0.95 1 83 479 561 83 0 0 760 G1KTM9 Uncharacterized protein OS=Anolis carolinensis GN=UBTF PE=4 SV=1
76 : H3BB71_LATCH 0.84 0.91 2 81 480 559 80 0 0 752 H3BB71 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
77 : M3XJX1_LATCH 0.84 0.91 2 81 212 291 80 0 0 414 M3XJX1 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=1
78 : Q8AVJ8_XENLA 0.81 0.92 1 83 419 501 83 0 0 701 Q8AVJ8 Ubtf-b protein OS=Xenopus laevis GN=ubtf-b PE=2 SV=1
79 : UBF1A_XENLA 0.81 0.93 1 83 397 479 83 0 0 677 P25979 Nucleolar transcription factor 1-A OS=Xenopus laevis GN=ubtf-a PE=2 SV=1
80 : UBF1B_XENLA 0.81 0.92 1 83 419 501 83 0 0 701 P25980 Nucleolar transcription factor 1-B OS=Xenopus laevis GN=ubtf-b PE=2 SV=1
81 : W5N2H8_LEPOC 0.81 0.92 1 83 466 548 83 0 0 737 W5N2H8 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
82 : F6ZYJ1_XENTR 0.80 0.93 1 83 232 314 83 0 0 474 F6ZYJ1 Uncharacterized protein OS=Xenopus tropicalis GN=ubtf PE=4 SV=1
83 : F7DIJ6_XENTR 0.80 0.93 1 83 449 531 83 0 0 668 F7DIJ6 Uncharacterized protein OS=Xenopus tropicalis GN=ubtf PE=4 SV=1
84 : Q07G04_XENTR 0.80 0.93 1 83 201 283 83 0 0 483 Q07G04 Upstream binding transcription factor, RNA polymerase I (Fragment) OS=Xenopus tropicalis GN=ubtf PE=2 SV=1
85 : F1QZ83_DANRE 0.77 0.90 1 83 469 551 83 0 0 735 F1QZ83 Uncharacterized protein OS=Danio rerio GN=ubtf PE=4 SV=1
86 : G5DXZ8_9PIPI 0.77 0.87 2 83 366 442 82 1 5 530 G5DXZ8 Putative nucleolar transcription factor 1-a (Fragment) OS=Pipa carvalhoi PE=2 SV=1
87 : Q8JFU0_DANRE 0.77 0.90 1 83 455 537 83 0 0 682 Q8JFU0 Novel protein similar to human upstream binding transcription factor, RNA polymerase I (UBTF) (Fragment) OS=Danio rerio GN=ubtf PE=4 SV=1
88 : H2V0H7_TAKRU 0.76 0.91 1 82 469 550 82 0 0 753 H2V0H7 Uncharacterized protein OS=Takifugu rubripes GN=LOC101077249 PE=4 SV=1
89 : H3C500_TETNG 0.76 0.91 1 82 472 553 82 0 0 726 H3C500 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
90 : H3CF76_TETNG 0.76 0.91 1 82 472 553 82 0 0 699 H3CF76 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
91 : I3IWM2_ORENI 0.76 0.92 1 83 469 551 83 0 0 752 I3IWM2 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100706101 PE=4 SV=1
92 : Q4T4S3_TETNG 0.76 0.91 1 82 484 565 82 0 0 777 Q4T4S3 Chromosome undetermined SCAF9556, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00007177001 PE=4 SV=1
93 : W5MVX2_LEPOC 0.76 0.90 2 64 431 493 63 0 0 692 W5MVX2 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
94 : W5UL97_ICTPU 0.75 0.90 1 83 471 553 83 0 0 741 W5UL97 Nucleolar transcription factor 1 OS=Ictalurus punctatus GN=UBTF PE=2 SV=1
95 : V9KX44_CALMI 0.74 0.91 1 81 93 173 81 0 0 369 V9KX44 Nucleolar transcription factor 1-like protein (Fragment) OS=Callorhynchus milii PE=2 SV=1
96 : H2LBF9_ORYLA 0.73 0.91 1 82 465 546 82 0 0 747 H2LBF9 Uncharacterized protein OS=Oryzias latipes GN=LOC101156013 PE=4 SV=1
97 : H2LBG0_ORYLA 0.73 0.91 1 82 455 536 82 0 0 688 H2LBG0 Uncharacterized protein OS=Oryzias latipes GN=LOC101156013 PE=4 SV=1
98 : V9KCU0_CALMI 0.73 0.90 1 82 489 570 82 0 0 765 V9KCU0 Nucleolar transcription factor 1-like protein OS=Callorhynchus milii PE=2 SV=1
99 : V9KD34_CALMI 0.73 0.90 1 82 485 566 82 0 0 761 V9KD34 Nucleolar transcription factor 1-like protein OS=Callorhynchus milii PE=2 SV=1
100 : G3P505_GASAC 0.71 0.89 1 83 414 496 83 0 0 654 G3P505 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
101 : G3P513_GASAC 0.71 0.89 1 83 452 534 83 0 0 676 G3P513 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
102 : H2TGZ3_TAKRU 0.71 0.90 2 64 436 498 63 0 0 712 H2TGZ3 Uncharacterized protein OS=Takifugu rubripes GN=LOC101062941 PE=4 SV=1
103 : H3AHS5_LATCH 0.71 0.83 2 71 431 500 70 0 0 725 H3AHS5 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
104 : M4A1E3_XIPMA 0.70 0.86 1 83 469 551 83 0 0 712 M4A1E3 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
105 : M4AEG6_XIPMA 0.70 0.86 1 64 435 498 64 0 0 715 M4AEG6 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
106 : W5ULY9_ICTPU 0.69 0.83 1 71 429 499 71 0 0 720 W5ULY9 Nucleolar transcription factor 1-B OS=Ictalurus punctatus GN=ubtf-b PE=2 SV=1
107 : H2TGZ0_TAKRU 0.68 0.86 2 81 396 475 80 0 0 675 H2TGZ0 Uncharacterized protein OS=Takifugu rubripes GN=LOC101062941 PE=4 SV=1
108 : H2TGZ1_TAKRU 0.68 0.86 2 81 451 530 80 0 0 735 H2TGZ1 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101062941 PE=4 SV=1
109 : H2TGZ2_TAKRU 0.68 0.86 2 81 451 530 80 0 0 727 H2TGZ2 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101062941 PE=4 SV=1
110 : H3CBL6_TETNG 0.68 0.86 1 81 448 528 81 0 0 712 H3CBL6 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
111 : Q4TA14_TETNG 0.68 0.86 1 81 477 557 81 0 0 810 Q4TA14 Chromosome undetermined SCAF7478, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00004491001 PE=4 SV=1
112 : I3K950_ORENI 0.67 0.85 1 81 428 508 81 0 0 700 I3K950 Uncharacterized protein OS=Oreochromis niloticus GN=ubtf PE=4 SV=1
113 : I3K951_ORENI 0.67 0.85 1 81 447 527 81 0 0 724 I3K951 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=ubtf PE=4 SV=1
114 : G3N9H7_GASAC 0.65 0.85 1 71 434 504 71 0 0 706 G3N9H7 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
115 : B0S7C2_DANRE 0.63 0.83 1 81 432 512 81 0 0 616 B0S7C2 Uncharacterized protein OS=Danio rerio GN=ubtfl PE=4 SV=1
116 : B0S7C3_DANRE 0.63 0.85 1 71 432 502 71 0 0 719 B0S7C3 Uncharacterized protein OS=Danio rerio GN=ubtfl PE=4 SV=1
117 : C0H9W0_SALSA 0.63 0.83 1 71 436 506 71 0 0 665 C0H9W0 Nucleolar transcription factor 1 OS=Salmo salar GN=UBF1 PE=2 SV=1
118 : K9N158_CYPCA 0.63 0.85 1 71 432 502 71 0 0 719 K9N158 Upstream binding transcription factor 1 OS=Cyprinus carpio PE=2 SV=1
119 : Q7SY36_DANRE 0.63 0.85 1 71 432 502 71 0 0 719 Q7SY36 Zgc:63557 OS=Danio rerio GN=ubtfl PE=2 SV=1
120 : W5KYS1_ASTMX 0.63 0.81 1 81 429 509 81 0 0 604 W5KYS1 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
121 : V9KEU9_CALMI 0.59 0.82 1 82 494 575 82 0 0 762 V9KEU9 Nucleolar transcription factor 1-like protein OS=Callorhynchus milii PE=2 SV=1
122 : S4RXC0_PETMA 0.53 0.79 1 81 475 555 81 0 0 757 S4RXC0 Uncharacterized protein (Fragment) OS=Petromyzon marinus GN=UBTF (2 of 2) PE=4 SV=1
123 : H2PA71_PONAB 0.42 0.53 1 83 307 367 83 1 22 450 H2PA71 Uncharacterized protein OS=Pongo abelii PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 25 115 47 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
2 2 A K + 0 0 148 124 20 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
3 3 A L - 0 0 127 124 9 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
4 4 A P + 0 0 48 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
5 5 A E - 0 0 135 124 12 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
6 6 A S - 0 0 44 124 63 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSSSSS
7 7 A P - 0 0 15 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
8 8 A K >> - 0 0 124 124 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
9 9 A R H 3> S+ 0 0 107 124 73 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRTRRTTTTT
10 10 A A H 3> S+ 0 0 6 124 14 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
11 11 A E H <> S+ 0 0 103 124 21 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
12 12 A E H X S+ 0 0 26 124 3 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
13 13 A I H X S+ 0 0 22 124 30 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
14 14 A W H X S+ 0 0 47 124 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
15 15 A Q H >X>S+ 0 0 38 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
16 16 A Q H 3<5S+ 0 0 113 124 16 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
17 17 A S H 3<5S+ 0 0 88 124 10 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
18 18 A V H XX5S+ 0 0 27 124 5 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
19 19 A I H 3X5S+ 0 0 10 124 7 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
20 20 A G H 3> S+ 0 0 111 124 4 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
22 22 A Y H X S+ 0 0 46 124 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
23 23 A L H <>S+ 0 0 45 124 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
24 24 A A H ><5S+ 0 0 60 124 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
25 25 A R H 3<5S+ 0 0 157 124 29 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
26 26 A F T 3<5S- 0 0 143 124 6 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
27 27 A K T < 5S+ 0 0 171 124 24 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
28 28 A N S > > + 0 0 25 123 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
30 30 A R H 3>> + 0 0 124 123 5 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
31 31 A V H <45S+ 0 0 120 123 94 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVGGEVEEVGGGG
32 32 A K H <>5S+ 0 0 139 123 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
33 33 A A H X5S+ 0 0 0 123 2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
34 34 A L H X5S+ 0 0 41 123 73 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
35 35 A K H >X S+ 0 0 87 123 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
39 39 A M H >X S+ 0 0 126 123 76 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMVMMVAAAA
40 40 A T H 3< S+ 0 0 57 123 40 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
41 41 A W H << S+ 0 0 31 123 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
42 42 A N H X< S+ 0 0 84 123 67 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
43 43 A N T 3< S+ 0 0 123 123 64 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
44 44 A M T > S- 0 0 69 123 1 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
45 45 A E G X> - 0 0 128 122 2 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
46 46 A K G 34>S+ 0 0 150 122 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
47 47 A K G <>5S+ 0 0 118 122 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
48 48 A E H <>5S+ 0 0 26 122 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
49 49 A K H X5S+ 0 0 47 122 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
50 50 A L H >>5S+ 0 0 89 123 35 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
51 51 A M H 3XX S+ 0 0 84 124 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
60 60 A Q H 3X S+ 0 0 10 124 3 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
61 61 A K H 3X S+ 0 0 121 124 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
62 62 A R H <4 S+ 0 0 170 124 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
63 63 A Y H >X S+ 0 0 48 124 6 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
64 64 A E H 3X S+ 0 0 74 124 4 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
65 65 A R H 3X S+ 0 0 168 120 23 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
66 66 A E H X4 S+ 0 0 12 120 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
67 67 A L H >X S+ 0 0 70 120 17 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
68 68 A S H 3< S+ 0 0 49 120 69 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
69 69 A E T << S+ 0 0 123 120 26 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
70 70 A M T <4 S+ 0 0 179 120 18 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMRMRRMMMMM
71 71 A R S < S+ 0 0 215 120 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
72 72 A A > + 0 0 17 113 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
73 73 A P G > S+ 0 0 98 113 47 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
74 74 A P G 3 S+ 0 0 87 113 44 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
75 75 A A G < S+ 0 0 49 113 44 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAACCCC
76 76 A A S < S+ 0 0 54 113 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATSSSS
77 77 A T S S+ 0 0 73 113 73 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAAAAAAAAATTTT
78 78 A N S S+ 0 0 133 113 80 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
79 79 A S S S+ 0 0 83 113 70 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
80 80 A S S S- 0 0 70 113 65 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSKTAA
81 81 A K - 0 0 130 113 17 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
82 82 A K 0 0 172 99 19 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK KKK
83 83 A L 0 0 214 90 19 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM MVV
## ALIGNMENTS 71 - 123
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A G 0 0 25 115 47 GGGAG AAAAAAAG GSSSSS SGSSGGSS SAT AAAAGTTTTTTPGG
2 2 A K + 0 0 148 124 20 KKKKKKKKKKRKKKKKKRRRRRRKKRRKKRRKKRKQKKKKKKKKRRKRRRRKK
3 3 A L - 0 0 127 124 9 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLTP
4 4 A P + 0 0 48 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
5 5 A E - 0 0 135 124 12 EEEEEEEEEEEEEEEEEDDDDDEDEDDEEDDEEDEEEEEEEEEEEEEEEDEEK
6 6 A S - 0 0 44 124 63 SSSSTSSTTTSTTTTTTPPPPPTPPPPPPPPTTPTTTTTTTTTTTTTTTTTTS
7 7 A P - 0 0 15 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
8 8 A K >> - 0 0 124 124 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
9 9 A R H 3> S+ 0 0 107 124 73 TTTTTNNTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTR
10 10 A A H 3> S+ 0 0 6 124 14 ASSAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAPPAPPPAAV
11 11 A E H <> S+ 0 0 103 124 21 EEEEEEEEEEQEEEQEQQQQQQEQEQQEEQQEEQEEEEEEEAAEEEEEEEEEQ
12 12 A E H X S+ 0 0 26 124 3 EEEEEEEEEEEEEEEEEEEEDEEEEDDEEDDEEEEEEEEEEEEEEEEEEEEEE
13 13 A I H X S+ 0 0 22 124 30 IIIIIIIIIIIIIIIIIIIIIIMIIIIIIIIMMITMMMMMMMMMMMMMMMMII
14 14 A W H X S+ 0 0 47 124 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFW
15 15 A Q H >X>S+ 0 0 38 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
16 16 A Q H 3<5S+ 0 0 113 124 16 QQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQHQQHQHHHHHHHHQQQQQQRQQ
17 17 A S H 3<5S+ 0 0 88 124 10 SSSSSSSSSSSSSSSSSSSSSSSSNSSNNSSSSSSSSSSSSSSSSSGSSSSTS
18 18 A V H XX5S+ 0 0 27 124 5 VVVVIVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVVVVVVKV
19 19 A I H 3X5S+ 0 0 10 124 7 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIITIIIIIIIIMIIVIIIVLI
20 20 A G H 3> S+ 0 0 111 124 4 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEN
22 22 A Y H X S+ 0 0 46 124 1 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYCY
23 23 A L H <>S+ 0 0 45 124 2 LLLLLLLLLLMLLLLLLMMMLMLLLLLLLLLLLVLLLLLLLLLLLLLLLLLLL
24 24 A A H ><5S+ 0 0 60 124 6 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVA
25 25 A R H 3<5S+ 0 0 157 124 29 RRRRRRRRRRRRRRRRRRRRRRKRKRRKKRRKKRKKKKKKKKKKKKKKKKRKC
26 26 A F T 3<5S- 0 0 143 124 6 FFFFFFFFFFYFFFFFFFFFFFYFFFFFFFFYYFYYYYYYYYYYYYYYYYCYF
27 27 A K T < 5S+ 0 0 171 124 24 KKKKKKKKKKRKKKKKKKKKKKRKRKKRRKKRRKRRRRRRRRRRRRRRRRKKK
28 28 A N S > > + 0 0 25 123 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD.
30 30 A R H 3>> + 0 0 124 123 5 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSK.
31 31 A V H <45S+ 0 0 120 123 94 GGGGGTTAAATAAAAVASSSPSKPSPPSSIIRKPRKRRRRRRRRKKKKKKRK.
32 32 A K H <>5S+ 0 0 139 123 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK.
33 33 A A H X5S+ 0 0 0 123 2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATAAAAA.
34 34 A L H X5S+ 0 0 41 123 73 LLLLLLLLLLLLLLQLQQQQQQQQIQQIIQQQQHQQQQQQQQQQQQQQQQQL.
35 35 A K H >X S+ 0 0 87 123 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEDDEDDEED.
39 39 A M H >X S+ 0 0 126 123 76 AAAAAAAAGAAAAAATAAAAAASASVVSSAAAATAAAAAAATTAAASAAAMA.
40 40 A T H 3< S+ 0 0 57 123 40 TTTTTTTTTTTTTTTTTTTTTTTATAATTTTATVATAAAAAAAAAAAAAAAE.
41 41 A W H << S+ 0 0 31 123 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW.
42 42 A N H X< S+ 0 0 84 123 67 NNNNNNNLLLNLLLNLNSSSSSKNSSSSSSSKNSRKKKKKKNNKKKKKKKSK.
43 43 A N T 3< S+ 0 0 123 123 64 NNNNNTTNNNTNNNTNTNNNTNATATTAATTSATSGSSSSSSSSAAAAAAAG.
44 44 A M T > S- 0 0 69 123 1 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLL.
45 45 A E G X> - 0 0 128 122 2 EEEEEEEEEEEEEEE.EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDD.
46 46 A K G 34>S+ 0 0 150 122 0 KKKKKKKKKKKKKKK.KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK.
47 47 A K G <>5S+ 0 0 118 122 0 KKKKKKKKKKKKKKK.KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK.
48 48 A E H <>5S+ 0 0 26 122 4 EEEEEEEEEEEEEEE.EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQ.
49 49 A K H X5S+ 0 0 47 122 0 KKKKKKKKKKKKKKK.KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK.
50 50 A L H >>5S+ 0 0 89 123 35 LLLLLLLIIIIIIIIEIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII.
51 51 A M H 3XX S+ 0 0 84 124 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDA
60 60 A Q H 3X S+ 0 0 10 124 3 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQK
61 61 A K H 3X S+ 0 0 121 124 3 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKD
62 62 A R H <4 S+ 0 0 170 124 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
63 63 A Y H >X S+ 0 0 48 124 6 YYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYK
64 64 A E H 3X S+ 0 0 74 124 4 EEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEER
65 65 A R H 3X S+ 0 0 168 120 23 RRRRRRRRRRRRRRRRRRRRRR RRRRRRRR VR VRRRRRRRVRVVVVRRRR
66 66 A E H X4 S+ 0 0 12 120 15 EEEEEEEEEEEEEEEEEEEEEE EEDDEEDD KD QEEEEEEEQEQQQQEEEE
67 67 A L H >X S+ 0 0 70 120 17 LLLLLLLLLLLLLLLLLLLLVL LLLLLLLL EL YLLLLLLLYLYYYYLLLL
68 68 A S H 3< S+ 0 0 49 120 69 SSSSISSSSSSSSSSSSCYYSY SSCCSSCC RC RLLLLLLLQLRRRRLTTS
69 69 A E T << S+ 0 0 123 120 26 EEEEEEEDDDEDDDEDEEEEEE EEEEEEEE TE TEEEEEEEPETPTTDETE
70 70 A M T <4 S+ 0 0 179 120 18 MMMMMMMMMMMMMMMMMMMMMM MLMMLLMM LM VMMMMMMMAMVVVVMILM
71 71 A R S < S+ 0 0 215 120 0 RRRRRRRRRRRRRRRRRRRRRR RRRRRRRR RR RRRRRRRRRRRRRRRRRW
72 72 A A > + 0 0 17 113 59 AAAAASSSASASSSSSSSSSSS SSSSSSSS S TTTTTTT T ISTA
73 73 A P G > S+ 0 0 98 113 47 PPPPPSSTTTPAAAPAPPPPPP PPPPPPPP P LLLLLPP V VPTL
74 74 A P G 3 S+ 0 0 87 113 44 PPPPPTTPPPPPPPAPAAAAAA AAAAAAAA A PPPPPVV L PVAP
75 75 A A G < S+ 0 0 49 113 44 CCCCPSSATAATTTPSPAAAAA GPAAPPII N AAAAAAA S STAA
76 76 A A S < S+ 0 0 54 113 54 SSSSSSSPPPVPPPVTVAAAAA MTAATTVV V GGGAAGG G GAPA
77 77 A T S S+ 0 0 73 113 73 TTTATVVTTTVTTTITIAAAIA VPAAPPFF V QQQPPQQ Q QQPT
78 78 A N S S+ 0 0 133 113 80 NNNNNNNTTTNTTTTTTIIIAI AMIIMMPP T SSSSSRR G GSHD
79 79 A S S S+ 0 0 83 113 70 SAASAPPAAAPAAAPAPAAASA APAAPPSS P HHHQQKK Q QQNS
80 80 A S S S- 0 0 70 113 65 TSSSSKKGGGVGGGGGGSSSGS GKSSKKGG L RRRRRPP R RKKS
81 81 A K - 0 0 130 113 17 KKKKRKKKKKKKKKKKKGGGKG KKGGKKKK K KKKKKKK K KKKK
82 82 A K 0 0 172 99 19 KKKKK KKKKKKKKKKKKKKK K KKMMKK K M M
83 83 A L 0 0 214 90 19 MMMMM VVVMVVVMLM M M MM M M
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 72 11 1 10 6 0 0 0 0 0 0 0 0 115 0 0 0.918 30 0.53
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 85 1 0 0 0 124 0 0 0.460 15 0.80
3 3 A 0 98 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 124 0 0 0.094 3 0.91
4 4 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 90 0 10 124 0 0 0.364 12 0.88
6 6 A 0 0 0 0 0 0 0 0 0 11 63 26 0 0 0 0 0 0 0 0 124 0 0 0.887 29 0.37
7 7 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 124 0 0 0.000 0 1.00
9 9 A 0 0 0 0 0 0 0 0 0 0 0 44 0 0 53 0 0 0 2 0 124 0 0 0.786 26 0.27
10 10 A 1 0 0 0 0 0 0 0 94 4 2 0 0 0 0 0 0 0 0 0 124 0 0 0.297 9 0.85
11 11 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 12 86 0 0 124 0 0 0.449 14 0.79
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 4 124 0 0 0.169 5 0.96
13 13 A 0 0 84 15 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 124 0 0 0.474 15 0.70
14 14 A 0 0 0 0 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.047 1 0.99
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 124 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 0 9 1 0 90 0 0 0 124 0 0 0.346 11 0.83
17 17 A 0 0 0 0 0 0 0 1 0 0 96 1 0 0 0 0 0 0 2 0 124 0 0 0.207 6 0.90
18 18 A 98 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 124 0 0 0.129 4 0.94
19 19 A 2 1 96 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 124 0 0 0.223 7 0.93
20 20 A 1 0 0 0 0 0 0 98 0 0 2 0 0 0 0 0 0 0 0 0 124 0 0 0.129 4 0.92
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 98 124 0 0 0.129 4 0.95
22 22 A 0 0 0 0 0 0 99 0 0 0 0 0 1 0 0 0 0 0 0 0 124 0 0 0.047 1 0.99
23 23 A 1 95 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.216 7 0.97
24 24 A 2 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.083 2 0.93
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 1 0 81 19 0 0 0 0 124 0 0 0.525 17 0.70
26 26 A 0 0 0 0 82 0 17 0 0 0 0 0 1 0 0 0 0 0 0 0 124 0 0 0.500 16 0.93
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 19 81 0 0 0 0 124 0 0 0.480 16 0.76
28 28 A 0 0 0 0 0 0 0 0 0 0 18 0 0 0 0 1 0 0 81 0 124 1 0 0.513 17 0.58
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 123 0 0 0.000 0 1.00
30 30 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 98 1 0 0 0 0 123 0 0 0.094 3 0.95
31 31 A 51 0 2 0 0 0 0 9 7 4 6 2 0 0 9 8 0 2 0 0 123 0 0 1.698 56 0.05
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 123 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 99 0 0 1 0 0 0 0 0 0 0 0 123 0 0 0.047 1 0.98
34 34 A 0 71 2 0 0 0 0 0 0 0 0 0 0 1 0 0 26 0 0 0 123 0 0 0.725 24 0.27
35 35 A 6 0 0 0 0 0 0 0 4 0 2 1 0 0 0 84 0 0 4 0 123 0 0 0.678 22 0.50
36 36 A 2 0 0 0 0 0 0 5 86 0 1 3 3 0 0 0 0 0 0 0 123 0 0 0.604 20 0.76
37 37 A 0 1 1 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.094 3 0.98
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 6 123 0 0 0.218 7 0.93
39 39 A 3 0 0 54 0 0 0 1 35 0 4 3 0 0 0 0 0 0 0 0 123 0 0 1.094 36 0.23
40 40 A 1 0 0 0 0 0 0 0 16 0 0 82 0 0 0 0 0 1 0 0 123 0 0 0.535 17 0.59
41 41 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.000 0 1.00
42 42 A 0 6 0 0 0 0 0 0 0 0 11 0 0 0 1 13 0 0 69 0 123 0 0 0.970 32 0.33
43 43 A 0 0 0 0 0 0 0 2 10 0 8 10 0 0 0 0 0 0 71 0 123 0 0 0.970 32 0.36
44 44 A 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 1 0 0.083 2 0.99
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 2 122 0 0 0.084 2 0.97
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 122 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 122 0 0 0.000 0 1.00
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 122 0 0 0.084 2 0.96
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 122 0 0 0.000 0 1.00
50 50 A 0 63 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 123 0 0 0.696 23 0.64
51 51 A 4 0 0 78 1 0 0 0 0 16 0 0 0 0 0 0 0 1 0 0 124 0 0 0.694 23 0.34
52 52 A 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 1 0 124 0 0 0.047 1 0.95
53 53 A 0 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.047 1 0.98
54 54 A 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 124 0 0 0.047 1 0.96
55 55 A 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 98 0 0 0 0 124 0 0 0.094 3 0.91
56 56 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 1 0 0 124 0 0 0.047 1 0.97
57 57 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 1 0 0 0 0 124 0 0 0.047 1 0.96
58 58 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 98 1 0 124 0 0 0.094 3 0.95
59 59 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 99 124 0 0 0.047 1 0.97
60 60 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 99 0 0 0 124 0 0 0.047 1 0.97
61 61 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 1 124 0 0 0.047 1 0.97
62 62 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 124 0 0 0.000 0 1.00
63 63 A 0 0 0 0 1 0 98 0 0 0 0 0 0 0 0 1 0 0 0 0 124 0 0 0.094 3 0.94
64 64 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 98 0 1 124 0 0 0.094 3 0.95
65 65 A 6 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 0 0 120 0 0 0.222 7 0.76
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 5 90 0 4 120 0 0 0.417 13 0.85
67 67 A 1 93 0 0 0 0 5 0 0 0 0 0 0 0 0 0 0 1 0 0 120 0 0 0.294 9 0.82
68 68 A 0 8 1 0 0 0 3 0 0 0 77 2 5 0 5 0 1 0 0 0 120 0 0 0.938 31 0.30
69 69 A 0 0 0 0 0 0 0 0 0 2 0 5 0 0 0 0 0 87 0 7 120 0 0 0.523 17 0.74
70 70 A 4 4 1 88 0 0 0 0 1 0 0 0 0 0 3 0 0 0 0 0 120 0 0 0.554 18 0.81
71 71 A 0 0 0 0 0 1 0 0 0 0 0 0 0 0 99 0 0 0 0 0 120 0 0 0.048 1 1.00
72 72 A 0 0 1 0 0 0 0 0 69 0 22 8 0 0 0 0 0 0 0 0 113 0 0 0.833 27 0.40
73 73 A 2 5 0 0 0 0 0 0 4 84 2 4 0 0 0 0 0 0 0 0 113 0 0 0.681 22 0.52
74 74 A 3 1 0 0 0 0 0 0 15 80 0 2 0 0 0 0 0 0 0 0 113 0 0 0.676 22 0.56
75 75 A 0 0 2 0 0 0 0 1 74 5 4 5 7 0 0 0 0 0 1 0 113 0 0 1.013 33 0.55
76 76 A 5 0 0 1 0 0 0 6 67 6 10 4 0 0 0 0 0 0 0 0 113 0 0 1.174 39 0.46
77 77 A 4 0 3 0 2 0 0 0 27 5 0 52 0 0 0 0 7 0 0 0 113 0 0 1.340 44 0.26
78 78 A 0 0 5 3 0 0 0 2 2 2 5 9 0 1 2 0 0 0 69 1 113 0 0 1.248 41 0.20
79 79 A 0 0 0 0 0 0 0 0 15 8 67 0 0 3 0 2 4 0 1 0 113 0 0 1.101 36 0.30
80 80 A 1 1 0 0 0 0 0 12 2 2 68 2 0 0 6 7 0 0 0 0 113 0 0 1.168 38 0.34
81 81 A 0 0 0 0 0 0 0 5 0 0 0 0 0 0 1 94 0 0 0 0 113 0 0 0.258 8 0.82
82 82 A 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 96 0 0 0 0 99 0 0 0.169 5 0.81
83 83 A 9 2 0 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90 0 0 0.404 13 0.80
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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