Complet list of 1l1i hssp file
Complete list of 1l1i.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1L1I
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-03
HEADER ANTIFREEZE PROTEIN 16-FEB-02 1L1I
COMPND MOL_ID: 1; MOLECULE: THERMAL HYSTERESIS PROTEIN ISOFORM YL-1 (2-14); C
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: TENEBRIO MOLITOR; ORGANISM_COMMON: YEL
AUTHOR M.E.DALEY,L.SPYRACOPOULOS,Z.JIA,P.L.DAVIES,B.D.SYKES
DBREF 1L1I A 1 84 UNP O16119 O16119_TENMO 29 112
SEQLENGTH 84
NCHAIN 1 chain(s) in 1L1I data set
NALIGN 74
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : ANPY1_TENMO 1.00 1.00 1 84 29 112 84 0 0 112 O16119 Thermal hysteresis protein YL-1 OS=Tenebrio molitor PE=1 SV=1
2 : Q3HNP8_TENMO 0.99 1.00 1 84 1 84 84 0 0 84 Q3HNP8 Thermal hysteresis protein isoform AFP84a (Fragment) OS=Tenebrio molitor PE=2 SV=1
3 : Q308R1_TENMO 0.95 0.96 1 84 1 84 84 0 0 84 Q308R1 Thermal hysteresis protein isoform AFP84d (Fragment) OS=Tenebrio molitor PE=2 SV=1
4 : Q9U748_TENMO 0.94 0.98 1 84 29 112 84 0 0 112 Q9U748 Thermal hysteresis protein isoform 4-9 (Precursor) OS=Tenebrio molitor PE=4 SV=1
5 : Q308N7_TENMO 0.93 0.98 1 84 1 84 84 0 0 84 Q308N7 THP isoform 84aa-XY (Fragment) OS=Tenebrio molitor PE=2 SV=1
6 : Q308R0_TENMO 0.92 0.96 1 84 1 84 84 0 0 84 Q308R0 Thermal hysteresis protein isoform AFP84e (Fragment) OS=Tenebrio molitor PE=2 SV=1
7 : K7TU49_TENMO 0.90 0.96 1 84 29 112 84 0 0 112 K7TU49 Antifreeze protein isoform Tm2 (Precursor) OS=Tenebrio molitor GN=afp PE=4 SV=1
8 : K7TFV3_TENMO 0.89 0.96 1 84 29 112 84 0 0 112 K7TFV3 Antifreeze protein isoform Tm1 (Precursor) OS=Tenebrio molitor GN=afp PE=4 SV=1
9 : Q9U747_TENMO 0.89 0.96 1 84 29 112 84 0 0 112 Q9U747 Thermal hysteresis protein isoform D-16 (Precursor) OS=Tenebrio molitor PE=4 SV=1
10 : Q075A8_TENMO 0.88 0.95 1 84 20 103 84 0 0 103 Q075A8 Antifreeze protein isoform To (Fragment) OS=Tenebrio molitor PE=4 SV=1
11 : O16120_TENMO 0.87 0.96 1 84 29 112 84 0 0 112 O16120 Thermal hysteresis protein isoform YL-2 (1-3) (Precursor) OS=Tenebrio molitor PE=4 SV=1
12 : Q308R2_TENMO 0.87 0.94 1 84 1 84 84 0 0 84 Q308R2 Thermal hysteresis protein isoform AFP84c (Fragment) OS=Tenebrio molitor PE=2 SV=1
13 : Q9U746_TENMO 0.87 0.96 1 84 29 112 84 0 0 112 Q9U746 Thermal hysteresis protein isoform 3-4 (Precursor) OS=Tenebrio molitor PE=4 SV=1
14 : Q075A9_TENMO 0.86 0.94 1 84 20 103 84 0 0 103 Q075A9 Antifreeze protein isoform Tn (Fragment) OS=Tenebrio molitor PE=4 SV=1
15 : Q9U745_TENMO 0.86 0.93 1 84 29 112 84 0 0 112 Q9U745 Thermal hysteresis protein isoform C-9 (Precursor) OS=Tenebrio molitor PE=4 SV=1
16 : Q075A6_TENMO 0.85 0.95 1 84 20 103 84 0 0 103 Q075A6 Antifreeze protein isoform Ts (Fragment) OS=Tenebrio molitor PE=4 SV=1
17 : Q074Z8_TENMO 0.84 0.90 1 83 29 111 83 0 0 119 Q074Z8 Antifreeze protein isoform Tq (Precursor) OS=Tenebrio molitor PE=4 SV=1
18 : A1IID1_9SCAR 0.80 0.91 1 82 29 110 82 0 0 110 A1IID1 Antifreeze protein OS=Dorcus curvidens binodulosus GN=dcbAFP6 PE=4 SV=1
19 : H9BR51_TENMO 0.80 0.91 1 81 15 95 81 0 0 118 H9BR51 Antifreeze protein (Fragment) OS=Tenebrio molitor GN=BAFP PE=2 SV=1
20 : H9BR52_TENMO 0.80 0.91 1 81 14 94 81 0 0 117 H9BR52 Antifreeze protein (Fragment) OS=Tenebrio molitor GN=YAFP PE=2 SV=1
21 : Q074Z7_TENMO 0.80 0.88 1 83 29 111 83 0 0 119 Q074Z7 Antifreeze protein isoform Tr (Precursor) OS=Tenebrio molitor PE=4 SV=1
22 : B0FZ72_9CUCU 0.79 0.91 2 82 1 81 81 0 0 83 B0FZ72 Antifreeze protein (Fragment) OS=Blaps kashgarensis GN=afp972 PE=2 SV=1
23 : Q074Z5_TENMO 0.79 0.89 1 84 25 109 85 1 1 109 Q074Z5 Antifreeze protein isoform Taa (Fragment) OS=Tenebrio molitor PE=2 SV=1
24 : Q075B1_TENMO 0.78 0.92 8 81 1 74 74 0 0 89 Q075B1 Antifreeze protein isoform Tj (Fragment) OS=Tenebrio molitor PE=4 SV=1
25 : A1IID0_9SCAR 0.76 0.89 1 83 29 111 83 0 0 111 A1IID0 Antifreeze protein OS=Dorcus curvidens binodulosus GN=dcbAFP5 PE=4 SV=1
26 : J3JZ01_DENPD 0.76 0.81 1 83 25 119 95 1 12 120 J3JZ01 Uncharacterized protein OS=Dendroctonus ponderosae PE=2 SV=1
27 : A1IIC9_9SCAR 0.75 0.89 1 83 29 111 83 0 0 125 A1IIC9 Antifreeze protein OS=Dorcus curvidens binodulosus GN=dcbAFP4 PE=2 SV=1
28 : Q075A7_TENMO 0.74 0.82 1 84 20 91 84 1 12 91 Q075A7 Antifreeze protein isoform Tp (Fragment) OS=Tenebrio molitor PE=4 SV=1
29 : F2VKG6_9CUCU 0.73 0.84 2 82 26 106 81 0 0 106 F2VKG6 Antifreeze protein isoform 1 OS=Anatolica polita GN=afpwj914 PE=4 SV=1
30 : O16121_TENMO 0.73 0.84 1 84 29 124 96 1 12 124 O16121 Thermal hysteresis protein isoform YL-3 (3-8) (Precursor) OS=Tenebrio molitor PE=2 SV=1
31 : Q075A2_TENMO 0.72 0.90 1 69 20 88 69 0 0 91 Q075A2 Antifreeze protein isoform Tx (Fragment) OS=Tenebrio molitor PE=4 SV=1
32 : Q075A3_TENMO 0.72 0.90 1 69 20 88 69 0 0 91 Q075A3 Antifreeze protein isoform Tw (Fragment) OS=Tenebrio molitor PE=4 SV=1
33 : Q9U744_TENMO 0.72 0.83 1 84 29 124 96 1 12 124 Q9U744 Thermal hysteresis protein isoform 5-15 (Precursor) OS=Tenebrio molitor PE=2 SV=1
34 : Q075A4_TENMO 0.71 0.90 1 69 20 88 69 0 0 91 Q075A4 Antifreeze protein isoform Tu (Fragment) OS=Tenebrio molitor PE=4 SV=1
35 : Q075A5_TENMO 0.71 0.90 1 69 20 88 69 0 0 91 Q075A5 Antifreeze protein isoform Tt (Fragment) OS=Tenebrio molitor PE=4 SV=1
36 : Q38IX6_TENMO 0.71 0.90 1 69 10 78 69 0 0 81 Q38IX6 Antifreeze protein BST1 OS=Tenebrio molitor GN=BST1 PE=4 SV=1
37 : Q075A1_TENMO 0.70 0.86 1 69 20 87 69 1 1 90 Q075A1 Antifreeze protein isoform Tz (Fragment) OS=Tenebrio molitor PE=4 SV=1
38 : Q074Z9_TENMO 0.69 0.78 1 84 29 124 96 1 12 132 Q074Z9 Antifreeze protein isoform Th (Precursor) OS=Tenebrio molitor PE=2 SV=1
39 : Q38IX5_TENMO 0.69 0.79 1 84 29 100 84 1 12 100 Q38IX5 Antifreeze protein BST2 OS=Tenebrio molitor GN=BST2 PE=4 SV=1
40 : Q38IX3_TENMO 0.68 0.76 1 84 25 120 96 1 12 120 Q38IX3 Antifreeze protein 7KSK4 OS=Tenebrio molitor GN=7KSK4 PE=4 SV=1
41 : Q5BMM9_TENMO 0.68 0.80 1 69 1 69 69 0 0 72 Q5BMM9 Thermal hysteresis protein isoform AFP-72 (Fragment) OS=Tenebrio molitor PE=2 SV=1
42 : Q075A0_TENMO 0.66 0.84 8 84 30 106 77 0 0 106 Q075A0 Antifreeze protein isoform Tf (Precursor) OS=Tenebrio molitor PE=4 SV=1
43 : Q5G6W8_9CUCU 0.66 0.76 1 84 24 119 96 1 12 120 Q5G6W8 Antifreeze protein isoform 1 OS=Microdera dzhungarica punctipennis PE=2 SV=1
44 : Q5G6W9_9CUCU 0.66 0.75 1 84 24 119 96 1 12 120 Q5G6W9 Antifreeze protein OS=Microdera dzhungarica punctipennis PE=2 SV=1
45 : Q38IX4_TENMO 0.65 0.76 1 84 29 100 84 1 12 100 Q38IX4 Antifreeze protein BST3 OS=Tenebrio molitor GN=BST3 PE=4 SV=1
46 : O46351_9CUCU 0.64 0.83 1 82 26 108 83 1 1 108 O46351 Antifreeze protein-1A OS=Dendroides canadensis PE=4 SV=1
47 : O46352_9CUCU 0.64 0.83 1 82 26 108 83 1 1 108 O46352 Antifreeze protein-1E OS=Dendroides canadensis PE=4 SV=1
48 : Q075B0_TENMO 0.64 0.74 1 84 20 116 97 2 13 116 Q075B0 Antifreeze protein isoform Tm (Fragment) OS=Tenebrio molitor PE=4 SV=1
49 : Q6DLX5_TENMO 0.64 0.74 1 84 29 125 97 2 13 125 Q6DLX5 Thermal hysteresis protein isoform 431 (Fragment) OS=Tenebrio molitor PE=2 SV=1
50 : A1IIC7_9SCAR 0.63 0.77 1 83 29 123 95 1 12 137 A1IIC7 Antifreeze protein OS=Dorcus curvidens binodulosus GN=dcbAFP2 PE=2 SV=1
51 : O46346_9CUCU 0.63 0.81 1 82 26 109 84 2 2 109 O46346 Antifreeze protein-2A OS=Dendroides canadensis PE=4 SV=1
52 : A1IIC8_9SCAR 0.61 0.73 1 84 29 124 96 1 12 124 A1IIC8 Antifreeze protein OS=Dorcus curvidens binodulosus GN=dcbAFP3 PE=2 SV=1
53 : Q9NCR5_9CUCU 0.59 0.71 1 82 25 95 83 2 13 104 Q9NCR5 Antifreeze protein 3 OS=Dendroides canadensis GN=afp-3 PE=4 SV=1
54 : A1IIC6_9SCAR 0.58 0.75 1 81 29 121 93 1 12 136 A1IIC6 Antifreeze protein (Precursor) OS=Dorcus curvidens binodulosus GN=dcbAFP1 PE=2 SV=1
55 : O16122_TENMO 0.58 0.71 1 81 29 121 93 1 12 148 O16122 Thermal hysteresis protein isoform YL-4 (2-20) (Precursor) OS=Tenebrio molitor PE=2 SV=1
56 : Q308N6_TENMO 0.58 0.71 1 81 2 94 93 1 12 121 Q308N6 THP isoform 120aa (Fragment) OS=Tenebrio molitor PE=2 SV=1
57 : E9JTX2_9CUCU 0.57 0.64 1 84 5 75 84 2 13 80 E9JTX2 Antifreeze protein isoform 1 (Fragment) OS=Anatolica polita GN=afpwj752 PE=2 SV=1
58 : Q9NCR1_9CUCU 0.57 0.68 1 82 26 121 96 3 14 121 Q9NCR1 Antifreeze protein 8 OS=Dendroides canadensis GN=afp-8 PE=2 SV=1
59 : Q9NCQ9_9CUCU 0.56 0.72 1 83 20 115 96 2 13 123 Q9NCQ9 Antifreeze protein 10 (Fragment) OS=Dendroides canadensis GN=afp-10 PE=2 SV=1
60 : Q9NCR0_9CUCU 0.56 0.73 1 83 26 121 96 2 13 129 Q9NCR0 Antifreeze protein 9 OS=Dendroides canadensis GN=afp-9 PE=2 SV=1
61 : O96419_9CUCU 0.55 0.71 1 82 26 96 83 2 13 96 O96419 Anti-freeze protein OS=Dendroides canadensis GN=dafp-4 PE=4 SV=1
62 : Q9NCQ6_9CUCU 0.55 0.71 1 82 28 98 83 2 13 98 Q9NCQ6 Antifreeze protein 13 (Fragment) OS=Dendroides canadensis GN=afp-13 PE=2 SV=1
63 : Q9NCQ8_9CUCU 0.55 0.71 1 81 26 119 94 2 13 148 Q9NCQ8 Antifreeze protein 11 OS=Dendroides canadensis GN=afp-11 PE=2 SV=1
64 : Q9NCR3_9CUCU 0.55 0.71 1 82 21 91 83 2 13 91 Q9NCR3 Antifreeze protein 6 (Fragment) OS=Dendroides canadensis GN=afp-6 PE=2 SV=1
65 : Q9NCR2_9CUCU 0.54 0.69 2 82 41 135 95 3 14 136 Q9NCR2 Antifreeze protein 7 (Fragment) OS=Dendroides canadensis GN=afp-7 PE=2 SV=1
66 : K7TJK8_TENMO 0.52 0.68 1 84 29 100 84 1 12 100 K7TJK8 Antifreeze protein isoform Tm3 (Precursor) OS=Tenebrio molitor GN=afp PE=4 SV=1
67 : Q9NCQ7_9CUCU 0.51 0.68 2 82 23 117 95 3 14 118 Q9NCQ7 Antifreeze protein 12 OS=Dendroides canadensis GN=afp-12 PE=4 SV=1
68 : Q9NCR4_9CUCU 0.51 0.68 2 82 26 120 95 3 14 122 Q9NCR4 Antifreeze protein 5 (Fragment) OS=Dendroides canadensis GN=afp-5 PE=2 SV=1
69 : U3JKJ1_FICAL 0.33 0.52 2 83 108 194 87 2 5 243 U3JKJ1 Uncharacterized protein OS=Ficedula albicollis PE=4 SV=1
70 : E6VQ10_RHOPX 0.31 0.47 2 83 134 220 87 2 5 231 E6VQ10 Putative uncharacterized protein OS=Rhodopseudomonas palustris (strain DX-1) GN=Rpdx1_2080 PE=4 SV=1
71 : F4PXD4_DICFS 0.30 0.49 1 81 101 174 83 4 11 895 F4PXD4 Extracellular matrix protein OS=Dictyostelium fasciculatum (strain SH3) GN=ecmB PE=4 SV=1
72 : M1HZK6_9PHYC 0.30 0.58 6 83 41 119 79 1 1 146 M1HZK6 Uncharacterized protein OS=Acanthocystis turfacea Chlorella virus MN0810.1 GN=MN0810.1_454R PE=4 SV=1
73 : T1G0X9_HELRO 0.30 0.40 2 81 1 97 97 3 17 124 T1G0X9 Uncharacterized protein (Fragment) OS=Helobdella robusta GN=HELRODRAFT_72278 PE=4 SV=1
74 : T1KV81_TETUR 0.30 0.50 1 83 22 115 94 2 11 180 T1KV81 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A Q 0 0 224 64 27 QQQQQQQQQQHQHQRQQQQQQ Q QQQQ QQKQKKKQQQQQ QQKQQQQQQQQQQQQQEQQQEQ Q
2 2 A a + 0 0 44 72 0 CCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCC
3 3 A T S S+ 0 0 36 72 14 TTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTT TTTTTSTTTTTTTTTTTTTTTTTSTTTV
4 4 A G + 0 0 70 72 14 GGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGFG
5 5 A G S S- 0 0 58 72 28 GGGGAGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGRGGGG GGGGGGGGGGAGAAVGGGGGGGGGGGMS
6 6 A A S S+ 0 0 59 73 57 AAAAAASSSAAAAAAAAAAAAST TATASAAAAAAAAAAAA SSASSASTSSPSAADSSSSSSSGAPPAL
7 7 A D + 0 0 126 72 32 DDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDD DDDDDDDDDDDNDD.DDDDDDDNDNNSG
8 8 A b + 0 0 12 75 2 CCCCCCCCCCCCCCCCCCCCCRCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
9 9 A T S S+ 0 0 95 75 50 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTRRTTTRTSSTTFSSSQQRSSSNNTV
10 10 A S S S+ 0 0 98 75 42 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSMSSSSSSNSSSASSSSSSSSSSSASAAlg
11 11 A a - 0 0 37 75 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCcc
12 12 A T S S+ 0 0 104 75 18 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTMTTTTTTTTTTTTV
13 13 A G S S- 0 0 41 74 67 GGGAAAAAAVDVDAQAEEAAAAAASESETAAAAAAA.AAAGNAVAVVAVSVSTAAAAGVVVVAVTETTLG
14 14 A A - 0 0 51 75 37 AAAAAAAAAAAAAAAAAGAAAAGGAAAAAAAAAAAASAAAASAAASSEAASAAAAAEAAASSASASAAas
15 15 A c B +a 27 0A 4 74 1 CCCCCCCCCCCCCSCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcc
16 16 A T S S- 0 0 76 75 16 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTV
17 17 A G S S+ 0 0 18 75 47 GGGGGGGGGGGGGGSGGDGGGGGGGGGGNGGGGGGGNGGGGNNNGDDGGSDGDGGGNTNDDDSNNGNNLG
18 18 A b - 0 0 7 75 15 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTS
19 19 A G S S+ 0 0 10 75 66 GGGGGGGGGGGGGGRGGGGGGAGGGGGGQGGGGGGGGGGGAEQEGQQGEAQGVGGGGRQQQQQQVIIIAL
20 20 A N + 0 0 54 75 30 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNSNKNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSG
21 21 A c - 0 0 16 75 7 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A P S S- 0 0 48 75 27 PPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPRPPPPPPPPPPPTV
23 23 A N S S+ 0 0 120 75 29 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNLG
24 24 A A - 0 0 1 75 19 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAS
25 25 A V S S- 0 0 86 75 85 VVVVVAHHHVHVHAKVVKVVAVLVQHQVHHAAHAAAVVVHRVQVArrIVQrQlHIIRmllrrrrlRllTL
26 26 A T - 0 0 38 75 43 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTaaTTTaTaTTTTaaaaaaaaTaaSG
27 27 A d B -ab 15 39A 3 75 6 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A T S S- 0 0 59 75 28 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTITTTVTTTTTTTTTTTTTTTTTTTTTTTTHTTTV
29 29 A N S S+ 0 0 73 75 57 NNNNNDDDDDDDDDNDDNNNDDDNNNNDDDDDDDDDDDDGGNNDDRRAGNRNRNGGDGDDGGGGDGDDLG
30 30 A S S S- 0 0 35 75 14 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSMS
31 31 A Q S S+ 0 0 115 75 80 QQQQQQQQQQKQKQQQQKQQQQGEGKGKTKKHKRKKKHKKRKKTKSSEKGSGTRKKQTTTSSTTTTTTAL
32 32 A H + 0 0 71 75 46 HHHHHHHHHNNNNNHNNNNNNNNNNNNNNNNNNNDNNNNNNNNNDNNNNNNNNNNNYGNNNNVNKNNNSG
33 33 A d > + 0 0 0 75 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A V T 3 S+ 0 0 52 75 61 VVVVVVVVVVVIVVVVVVVVVIAVVVVIRVLVVLVLLVIVIIKIIIIVLVNLYIVVNYYYIIHIMFLLTV
35 35 A K T 3 S+ 0 0 67 75 56 KKKKKKKKKNKNKNRKNKKKTNNKNKNNNRKKRKKKKKNRNNNNKNNKKNNNKNRRNRKQNNKNKNKKLG
36 36 A A S < S- 0 0 1 75 19 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAS
37 37 A N S S+ 0 0 94 75 77 NNNTTTAAAVAVAARVVLVVAVLLQYQVQEVVEAVAVVVTLVQQVLLLVQLQVLTTMTTMLLQLVVVVAL
38 38 A T - 0 0 53 75 23 TTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSG
39 39 A e B +b 27 0A 0 74 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
40 40 A T S S- 0 0 47 74 13 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.TTSTTTTTTTTTTTTTTTTTTTTTTTATTTV
41 41 A G S S+ 0 0 17 74 62 GGGGGGGGGGGGGGGGGGGGRGRGTgTGRdGGdGGGGg.gGGdgGDDegtDtKdggRrrrDDgDrGrrLG
42 42 A S S S- 0 0 3 66 12 SSSSSSSSSSSSSSSSSSSSSSSSSsSSSsSSsSSSSs.sSSss.SSsssSs.sss.sss..s.s.ssMS
43 43 A T S S+ 0 0 17 66 79 TTTTTTTTTTTTTTTTTSTTTSTTTTTTTRTTRTTTTE.KRTYY.YYKKQYQ.KKK.YYY..S.S.SSAL
44 44 A D + 0 0 45 66 50 DDDDDDDDDGKNKDDNDKNNKNDNNNNDNNNNNNNNND.DNNNN.DDDDDDD.DGG.DDD..E.D.DDSG
45 45 A e B +c 57 0B 0 65 0 CCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCC.CCCCC.CCCCCCC.CCC.CCC..C.C.CCCC
46 46 A N S S+ 0 0 76 65 79 NNNNNNNNNNNNNNNNNNNNNNNNNNN.NNKKNKKKNF.FNNNN.HHFFFHF.LLL.YFF..N.Y.FFTV
47 47 A T S S+ 0 0 73 65 79 TTKTTTTTTTTKTTRATTRRTKKRRKR.RTAATAAASE.ERRRK.NNEEANA.AEK.NNN..N.K.KKIG
48 48 A A S S- 0 0 2 65 23 AAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAAAAAA.AAAAA.AAAAAAA.AAA.AAA..A.A.AAMS
49 49 A Q S S+ 0 0 88 66 79 QQTVVTRRRTRTRTMTTTTTRTMRVMV.MMTTMTTTTA.TTTMV.EELTTET.TTT.AED..Q.V.VVAL
50 50 A T E -d 62 0C 33 66 24 TTTTTTTTTTTTTTTTTTTTTTTTTTT.TTTTTTTTTT.TTTTT.TTTTTTT.TTT.TTT..T.T.TTSG
51 51 A f E -d 63 0C 7 67 0 CCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCCCCCC.CCCCCCC.CCC.CCC..C.C.CCCC
52 52 A T S S- 0 0 54 67 15 TTTTTTTTTTTTTTTTTTTTTTTTTTT.TTTTTTTTTTTTISTT.TTTTTTT.TTT.TTT..T.T.TTTV
53 53 A N S S+ 0 0 84 67 62 NNNNNNNNNNNNNNNKNGNNNNNNSNS.NNDDNDDDNGGGGNNN.RRGGSRS.TGG.GGR..G.G.GGLG
54 54 A S > - 0 0 0 74 13 SSSSSSSSSSSSSSSSSSSSSSSSSSS.SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSAS
55 55 A K T 3 S+ 0 0 119 74 76 KKKKKKKKKKKKKKKKKQEEKSKKTKT.YKTTKTTTTSTSTKYFTTTSSSTTYTTTTTTTHHHHTTTTAL
56 56 A D T 3 + 0 0 40 74 53 DDDDDDDDDDDDDDDDDDDDDDDDNDN.DDNNDNNNNNDNDDDDNNNNNNNNDNHHDNNNDDDDNNNNSG
57 57 A f B < +c 45 0B 0 75 4 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
58 58 A F S S+ 0 0 57 75 59 FFFFFFFFFFFFFFFFFFFFFFFFYFYFFFYYFYYYYYFYYFFFKYYYYYYHYNHHFYYYHHHHYNYYTV
59 59 A E S S+ 0 0 134 75 72 EEEEEEEEEEEEEEEAEIEEEEEETETENEKKEKKKKTETKVEEAKKKKTKTKKRRNKTTNNNNKRKKLG
60 60 A A - 0 0 3 75 24 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAMS
61 61 A N S S+ 0 0 76 75 77 NNTQQQAAATKTKTKTTSTTATPITTTTAKKQKKKKVAARTTAVAKKTTTKTVKTTITKKEEQEKTKKAL
62 62 A T E +de 50 74C 57 75 32 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTSSNSSG
63 63 A g E +d 51 0C 0 75 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
64 64 A T S S+ 0 0 54 75 24 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTISTTTTTTTTTITTTTVTTTTTTTTAAATV
65 65 A D S S+ 0 0 80 75 58 DDDDDDDDDDDDDDDDDDGGDDDGDGDDDDRRDRRRNDDNGGDDDGGNNDGNDNNNDGGGRRGRGGGAIG
66 66 A S - 0 0 6 75 14 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSMS
67 67 A T + 0 0 31 75 39 TTTTTTTTTTTTTTTTTTSSTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTKKTTTTTTYTTTTTAL
68 68 A N + 0 0 71 75 38 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGNGGGGNNNGNNNNNNNNNNNNNDDNNNNNNDNNGNNSG
69 69 A g - 0 0 0 75 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
70 70 A Y S S- 0 0 153 68 43 YYYYYYYYYYYYYYYYYYYYYNYYYYYYYY Y YYY YYYYYYYYYYHYYFFYYYYYYYYYYFFTV
71 71 A K S S+ 0 0 168 68 62 KKKKKKKKKKKKKKKRKKTTKKKTAKAKKK K KKK KKKKEEKNAEAEAEEKEEEKKNKEKEELG
72 72 A A - 0 0 18 68 21 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA A AAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAS
73 73 A T S S+ 0 0 112 68 44 TTTTTTTTTTTTTTTTTTAATTtRTTTTTT T TKT ITTKTTttTtTTTTTTtTTKKTKtTttAL
74 74 A A B +e 62 0C 46 67 51 AAAAAAAAAAAAATTAATTTTAaTTATATA A TTA TATTAAaaTaTATTTTaAATTTTaTssSG
75 75 A h + 0 0 35 68 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCYC C CCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
76 76 A T S S+ 0 0 125 68 28 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTT T TTT VTTTTTTTTTITTTTITTTTTTTVLVVTV
77 77 A N S S+ 0 0 104 68 62 NNNNNNHHHNNNNNNSINDDINRNNNNNRN N NRN NHRRDDNNNDNNDGGNDDDDDGDNGNNLG
78 78 A S - 0 0 18 68 16 SSSSSSSSSSSSSSSSQSSSQSSSSSSSSS S SSS SSSSSSSSSSSSSSSSSSSSSSSSSSSAS
79 79 A S S S+ 0 0 69 68 42 STTTTTSTTTTTTTTTQTTTQTTTTTTTTT T TTT TTTTTTTTTTSTTSSTTTTTTTTTTTTAL
80 80 A G S S+ 0 0 29 68 32 GGGGGGGGGGGGGGGGDGNNDGGNGGGGGG G GGG GGGGGGGGGGGGNNNGGGGGGNGGGGGSG
81 81 A h S > S- 0 0 9 68 11 CCCCCCCCCCCCCCCCVCCCVCCCCCCCCC C CCC CCCCCCCCCCCCCCCCCCCCCCCCCCCRC
82 82 A P T 3 S+ 0 0 83 59 18 PPPPPPPPPPPPPPPPPP PPP PPPPPP P PPP PPPPPPPPPPPP PPPPPP PPPPPPV
83 83 A G T 3 0 0 80 45 31 GGGGGGGGGGGGGGGGD D G GGGG G G GGG GNNG GGG G K SS G DG
84 84 A H < 0 0 231 33 27 HHHHHHHHHRHHHRHH H R H H QHH HKKH RH H H H
## ALIGNMENTS 71 - 74
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A Q 0 0 224 64 27 N N
2 2 A a + 0 0 44 72 0 C CC
3 3 A T S S+ 0 0 36 72 14 D TT
4 4 A G + 0 0 70 72 14 D SG
5 5 A G S S- 0 0 58 72 28 G SC
6 6 A A S S+ 0 0 59 73 57 DSIT
7 7 A D + 0 0 126 72 32 SSLN
8 8 A b + 0 0 12 75 2 CCCC
9 9 A T S S+ 0 0 95 75 50 TATS
10 10 A S S S+ 0 0 98 75 42 ympN
11 11 A a - 0 0 37 75 1 cccC
12 12 A T S S+ 0 0 104 75 18 STTI
13 13 A G S S- 0 0 41 74 67 NGPN
14 14 A A - 0 0 51 75 37 SSsc
15 15 A c B +a 27 0A 4 74 1 .Ccc
16 16 A T S S- 0 0 76 75 16 TSTH
17 17 A G S S+ 0 0 18 75 47 GHPG
18 18 A b - 0 0 7 75 15 CPSC
19 19 A G S S+ 0 0 10 75 66 TTIE
20 20 A N + 0 0 54 75 30 HALS
21 21 A c - 0 0 16 75 7 TSCC
22 22 A P S S- 0 0 48 75 27 RATS
23 23 A N S S+ 0 0 120 75 29 IAPD
24 24 A A - 0 0 1 75 19 QTSS
25 25 A V S S- 0 0 86 75 85 GGIT
26 26 A T - 0 0 38 75 43 CTLN
27 27 A d B -ab 15 39A 3 75 6 CRCC
28 28 A T S S- 0 0 59 75 28 SLTH
29 29 A N S S+ 0 0 73 75 57 TPPN
30 30 A S S S- 0 0 35 75 14 NPSS
31 31 A Q S S+ 0 0 115 75 80 NRII
32 32 A H + 0 0 71 75 46 QTLN
33 33 A d > + 0 0 0 75 0 CCCC
34 34 A V T 3 S+ 0 0 52 75 61 DTTA
35 35 A K T 3 S+ 0 0 67 75 56 DNPN
36 36 A A S < S- 0 0 1 75 19 SPSC
37 37 A N S S+ 0 0 94 75 77 NGIT
38 38 A T - 0 0 53 75 23 STLD
39 39 A e B +b 27 0A 0 74 0 CCCC
40 40 A T S S- 0 0 47 74 13 TTTK
41 41 A G S S+ 0 0 17 74 62 TNpd
42 42 A S S S- 0 0 3 66 12 .Pss
43 43 A T S S+ 0 0 17 66 79 .GIG
44 44 A D + 0 0 45 66 50 .TLN
45 45 A e B +c 57 0B 0 65 0 .CCC
46 46 A N S S+ 0 0 76 65 79 .TTE
47 47 A T S S+ 0 0 73 65 79 .NPG
48 48 A A S S- 0 0 2 65 23 .PSS
49 49 A Q S S+ 0 0 88 66 79 DGIR
50 50 A T E -d 62 0C 33 66 24 STLN
51 51 A f E -d 63 0C 7 67 0 CCCC
52 52 A T S S- 0 0 54 67 15 VTTT
53 53 A N S S+ 0 0 84 67 62 NNPT
54 54 A S > - 0 0 0 74 13 GPSC
55 55 A K T 3 S+ 0 0 119 74 76 KGIT
56 56 A D T 3 + 0 0 40 74 53 CTLY
57 57 A f B < +c 45 0B 0 75 4 VCCC
58 58 A F S S+ 0 0 57 75 59 RTTS
59 59 A E S S+ 0 0 134 75 72 TNPN
60 60 A A - 0 0 3 75 24 DPSC
61 61 A N S S+ 0 0 76 75 77 VGIA
62 62 A T E +de 50 74C 57 75 32 NTLD
63 63 A g E +d 51 0C 0 75 0 CCCC
64 64 A T S S+ 0 0 54 75 24 NTTT
65 65 A D S S+ 0 0 80 75 58 DNPS
66 66 A S - 0 0 6 75 14 NPSS
67 67 A T + 0 0 31 75 39 NGIR
68 68 A N + 0 0 71 75 38 ATLN
69 69 A g - 0 0 0 75 0 CCCC
70 70 A Y S S- 0 0 153 68 43 TTTS
71 71 A K S S+ 0 0 168 68 62 KNPD
72 72 A A - 0 0 18 68 21 DPSC
73 73 A T S S+ 0 0 112 68 44 SGIA
74 74 A A B +e 62 0C 46 67 51 .TLN
75 75 A h + 0 0 35 68 0 CCCC
76 76 A T S S+ 0 0 125 68 28 DTTT
77 77 A N S S+ 0 0 104 68 62 PNPA
78 78 A S - 0 0 18 68 16 SPSC
79 79 A S S S+ 0 0 69 68 42 SGIK
80 80 A G S S+ 0 0 29 68 32 GTLD
81 81 A h S > S- 0 0 9 68 11 CCCC
82 82 A P T 3 S+ 0 0 83 59 18 T Q
83 83 A G T 3 0 0 80 45 31 N G
84 84 A H < 0 0 231 33 27
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 3 2 8 81 3 3 0 64 0 0 0.758 25 0.72
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
3 3 A 1 0 0 0 0 0 0 0 0 0 3 94 0 0 0 0 0 0 0 1 72 0 0 0.272 9 0.85
4 4 A 0 0 0 0 1 0 0 96 0 0 1 0 0 0 0 0 0 0 0 1 72 0 0 0.219 7 0.86
5 5 A 1 0 0 1 0 0 0 86 6 0 3 0 1 0 1 0 0 0 0 0 72 0 0 0.626 20 0.72
6 6 A 0 1 1 0 0 0 0 1 53 4 29 7 0 0 0 0 0 0 0 3 73 1 0 1.283 42 0.43
7 7 A 0 1 0 0 0 0 0 1 0 0 4 0 0 0 0 0 0 0 7 86 72 0 0 0.565 18 0.68
8 8 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 0 0 75 0 0 0.071 2 0.97
9 9 A 1 0 0 0 1 0 0 0 1 0 13 72 0 0 5 0 3 0 3 0 75 0 0 1.028 34 0.49
10 10 A 0 1 0 3 0 0 1 1 5 1 84 0 0 0 0 0 0 0 3 0 75 0 5 0.726 24 0.58
11 11 A 0 0 0 0 0 0 0 0 0 0 1 0 99 0 0 0 0 0 0 0 75 0 0 0.071 2 0.98
12 12 A 1 0 1 1 0 0 0 0 1 0 1 93 0 0 0 0 0 0 0 0 75 1 0 0.352 11 0.82
13 13 A 16 1 0 0 0 0 0 11 43 1 5 7 0 0 0 0 1 7 4 3 74 0 0 1.822 60 0.33
14 14 A 0 0 0 0 0 0 0 4 75 0 17 0 1 0 0 0 0 3 0 0 75 1 4 0.805 26 0.63
15 15 A 0 0 0 0 0 0 0 0 0 0 1 0 99 0 0 0 0 0 0 0 74 0 0 0.072 2 0.99
16 16 A 1 0 0 0 0 0 0 0 1 0 1 95 0 1 0 0 0 0 0 0 75 0 0 0.282 9 0.83
17 17 A 0 1 0 0 0 0 0 65 0 1 4 1 0 1 0 0 0 0 15 11 75 0 0 1.157 38 0.53
18 18 A 0 0 0 0 0 0 0 0 0 1 3 1 95 0 0 0 0 0 0 0 75 0 0 0.264 8 0.85
19 19 A 3 1 5 0 0 0 0 60 5 0 0 3 0 0 3 0 15 5 0 0 75 0 0 1.405 46 0.34
20 20 A 0 1 0 0 0 0 0 1 1 0 5 0 0 1 0 1 0 0 88 0 75 0 0 0.557 18 0.69
21 21 A 0 0 0 0 0 0 0 0 0 0 1 1 97 0 0 0 0 0 0 0 75 0 0 0.141 4 0.92
22 22 A 1 0 0 0 0 0 0 0 3 89 1 3 0 0 3 0 0 0 0 0 75 0 0 0.506 16 0.72
23 23 A 0 1 1 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 92 1 75 0 0 0.422 14 0.71
24 24 A 0 0 0 0 0 0 0 0 93 0 4 1 0 0 0 0 1 0 0 0 75 0 0 0.308 10 0.80
25 25 A 28 11 5 1 0 0 0 3 12 0 0 3 0 15 13 3 7 0 0 0 75 0 14 2.084 69 0.14
26 26 A 0 1 0 0 0 0 0 1 19 0 1 75 1 0 0 0 0 0 1 0 75 0 0 0.819 27 0.56
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 0 0 75 0 0 0.071 2 0.93
28 28 A 3 1 3 0 0 0 0 0 0 0 1 89 0 3 0 0 0 0 0 0 75 0 0 0.506 16 0.71
29 29 A 0 1 0 0 0 0 0 16 1 3 0 1 0 0 5 0 0 0 27 45 75 0 0 1.430 47 0.42
30 30 A 0 0 0 1 0 0 0 0 0 1 96 0 0 0 0 0 0 0 1 0 75 0 0 0.212 7 0.85
31 31 A 0 1 3 0 0 0 0 7 1 0 7 16 0 3 5 25 28 3 1 0 75 0 0 1.978 66 0.19
32 32 A 1 1 0 0 0 0 1 3 0 0 1 1 0 15 0 1 1 0 71 3 75 0 0 1.123 37 0.54
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
34 34 A 48 11 19 1 1 0 5 0 3 0 0 4 0 1 1 1 0 0 3 1 75 0 0 1.728 57 0.38
35 35 A 0 1 0 0 0 0 0 1 0 1 0 1 0 0 9 45 1 0 37 1 75 0 0 1.293 43 0.43
36 36 A 0 0 0 0 0 0 0 0 93 1 4 0 1 0 0 0 0 0 0 0 75 0 0 0.308 10 0.81
37 37 A 29 17 1 3 0 0 1 1 13 0 0 12 0 0 1 0 11 3 7 0 75 0 0 2.029 67 0.22
38 38 A 0 1 0 0 0 0 0 1 1 0 3 92 0 0 0 0 0 0 0 1 75 1 0 0.404 13 0.76
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
40 40 A 1 0 0 0 0 0 0 0 1 0 1 95 0 0 0 1 0 0 0 0 74 0 0 0.285 9 0.86
41 41 A 0 1 0 0 0 0 0 58 0 1 0 7 0 0 14 1 0 1 1 15 74 8 23 1.342 44 0.38
42 42 A 0 0 0 2 0 0 0 0 0 2 97 0 0 0 0 0 0 0 0 0 66 0 0 0.157 5 0.88
43 43 A 0 2 2 0 0 0 12 3 2 0 9 53 0 0 5 9 3 2 0 0 66 0 0 1.634 54 0.20
44 44 A 0 2 0 0 0 0 0 6 0 0 2 2 0 0 0 6 0 2 35 47 66 1 0 1.316 43 0.50
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 65 0 0 0.000 0 1.00
46 46 A 2 5 0 0 15 0 3 0 0 0 0 5 0 5 0 8 0 2 57 0 65 0 0 1.467 48 0.21
47 47 A 0 0 2 0 0 0 0 3 14 2 2 28 0 0 15 15 0 8 12 0 65 0 0 1.960 65 0.21
48 48 A 0 0 0 2 0 0 0 0 92 2 5 0 0 0 0 0 0 0 0 0 65 0 0 0.344 11 0.77
49 49 A 12 3 2 11 0 0 0 2 5 0 0 39 0 0 12 0 6 6 0 3 66 0 0 1.936 64 0.20
50 50 A 0 2 0 0 0 0 0 2 0 0 3 92 0 0 0 0 0 0 2 0 66 0 0 0.369 12 0.75
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 67 0 0 0.000 0 1.00
52 52 A 3 0 1 0 0 0 0 0 0 0 1 94 0 0 0 0 0 0 0 0 67 0 0 0.288 9 0.84
53 53 A 0 1 0 0 0 0 0 24 0 1 6 3 0 0 6 1 0 0 49 7 67 0 0 1.514 50 0.37
54 54 A 0 0 0 0 0 0 0 1 1 1 95 0 1 0 0 0 0 0 0 0 74 0 0 0.285 9 0.86
55 55 A 0 1 1 0 1 0 4 1 1 0 8 36 0 5 0 35 1 3 0 0 74 0 0 1.673 55 0.24
56 56 A 0 1 0 0 0 0 1 1 0 0 1 1 1 3 0 0 0 0 35 54 74 0 0 1.147 38 0.46
57 57 A 1 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 75 0 0 0.071 2 0.95
58 58 A 1 0 0 0 47 0 32 0 0 0 1 4 0 9 1 1 0 0 3 0 75 0 0 1.397 46 0.41
59 59 A 1 1 1 0 0 0 0 1 3 1 0 12 0 0 4 24 0 40 11 0 75 0 0 1.715 57 0.28
60 60 A 0 0 0 1 0 0 0 0 92 1 3 0 1 0 0 0 0 0 0 1 75 0 0 0.404 13 0.75
61 61 A 5 1 4 0 0 0 0 1 15 1 1 31 0 0 1 24 7 4 4 0 75 0 0 1.997 66 0.23
62 62 A 0 1 0 0 0 0 0 1 1 0 5 87 0 0 0 0 0 0 3 1 75 0 0 0.607 20 0.68
63 63 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
64 64 A 3 0 3 0 0 0 0 0 4 0 1 88 0 0 0 0 0 0 1 0 75 0 0 0.550 18 0.75
65 65 A 0 0 1 0 0 0 0 23 1 1 1 0 0 0 11 0 0 0 12 49 75 0 0 1.408 47 0.42
66 66 A 0 0 0 1 0 0 0 0 0 1 96 0 0 0 0 0 0 0 1 0 75 0 0 0.212 7 0.85
67 67 A 0 1 1 0 0 0 1 1 1 0 4 84 0 0 1 3 0 0 1 0 75 0 0 0.775 25 0.60
68 68 A 0 1 0 0 0 0 0 12 1 0 1 1 0 0 0 0 0 0 79 4 75 0 0 0.802 26 0.62
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
70 70 A 1 0 0 0 6 0 82 0 0 0 1 6 0 1 0 0 0 0 1 0 68 0 0 0.741 24 0.56
71 71 A 0 1 0 0 0 0 0 1 7 1 0 4 0 0 1 59 0 18 4 1 68 0 0 1.396 46 0.38
72 72 A 0 0 0 0 0 0 0 0 93 1 3 0 1 0 0 0 0 0 0 1 68 0 0 0.361 12 0.79
73 73 A 0 1 3 0 0 0 0 1 6 0 1 78 0 0 1 7 0 0 0 0 68 1 8 0.905 30 0.55
74 74 A 0 1 0 0 0 0 0 1 51 0 4 40 0 0 0 0 0 0 1 0 67 0 0 1.038 34 0.48
75 75 A 0 0 0 0 0 0 1 0 0 0 0 0 99 0 0 0 0 0 0 0 68 0 0 0.077 2 0.99
76 76 A 7 1 3 0 0 0 0 0 0 0 0 87 0 0 0 0 0 0 0 1 68 0 0 0.543 18 0.72
77 77 A 0 1 3 0 0 0 0 7 1 3 1 0 0 6 7 0 0 0 51 18 68 0 0 1.592 53 0.37
78 78 A 0 0 0 0 0 0 0 0 1 1 93 0 1 0 0 0 3 0 0 0 68 0 0 0.361 12 0.83
79 79 A 0 1 1 0 0 0 0 1 1 0 10 79 0 0 0 1 3 0 0 0 68 0 0 0.831 27 0.57
80 80 A 0 1 0 0 0 0 0 81 0 0 1 1 0 0 0 0 0 0 10 4 68 0 0 0.729 24 0.68
81 81 A 3 0 0 0 0 0 0 0 0 0 0 0 96 0 1 0 0 0 0 0 68 0 0 0.209 6 0.89
82 82 A 2 0 0 0 0 0 0 0 0 95 0 2 0 0 0 0 2 0 0 0 59 0 0 0.257 8 0.82
83 83 A 0 0 0 0 0 0 0 80 0 0 4 0 0 0 0 2 0 0 7 7 45 0 0 0.763 25 0.69
84 84 A 0 0 0 0 0 0 0 0 0 0 0 0 0 79 12 6 3 0 0 0 33 0 0 0.719 24 0.72
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
23 74 98 1 tTa
26 42 66 12 gSENCVNALTCTGs
30 42 70 12 dSENCVKAHTCTGs
33 42 70 12 dSENCVKAHTCTGs
38 42 70 12 gSTNCNTATTCTNs
40 42 66 12 gSTNCNRATTCTNs
43 42 65 12 dSTNCKNAQTCTGs
44 42 65 12 gSTNCNNAVTCTGs
46 26 51 1 rTa
47 26 51 1 rTa
48 42 61 12 eSTNCNAATTCTNs
48 74 105 1 tTa
49 42 70 12 gSTNCSRATTCTNs
49 74 114 1 tTa
50 42 70 12 tSTNCNRATTCTNs
51 26 51 1 rTa
51 74 100 1 tTa
52 42 70 12 tSSNCNRATTCTNs
53 26 50 1 lTa
54 42 70 12 dSTNCRRARTCTNs
55 42 70 12 gSTNCNRATTCTNs
56 42 43 12 gSTNCNRTTTCTNs
58 26 51 1 mTa
58 42 68 12 rSSECNNAVTCTGs
58 74 112 1 tTa
59 26 45 1 lTa
59 42 62 12 rSTMCNGAVTCTDs
60 26 51 1 lIa
60 42 68 12 rSTMCNGALTCTDs
61 26 51 1 rTa
62 26 53 1 rTa
63 26 51 1 rSa
63 42 68 12 gSTGCYNAMTCTRs
64 26 46 1 rVa
65 25 65 1 lLa
65 41 82 12 rSTKCNKAVTCTNs
65 73 126 1 tTa
67 25 47 1 lLa
67 41 64 12 rSTKCNKAVTCTNs
67 73 108 1 tTs
68 25 50 1 lLa
68 41 67 12 rSTKCNKAVTCTNs
68 73 111 1 tTs
69 10 117 3 lMAFc
69 14 124 2 aTSc
70 10 143 3 gSLGc
70 14 150 2 sLGc
71 11 111 2 yDSc
72 6 46 1 mAc
73 10 10 3 pSILc
73 14 17 2 sILc
73 41 46 12 pSILCTPSILCTPs
74 15 36 2 cTNc
74 42 65 9 dCKNCNDCTAs
//