Complet list of 1koz hssp file
Complete list of 1koz.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1KOZ
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-03
HEADER TOXIN 25-DEC-01 1KOZ
COMPND MOL_ID: 1; MOLECULE: VOLTAGE-DEPENDENT CHANNEL INHIBITOR; CHAIN: A; SY
SOURCE MOL_ID: 1; SYNTHETIC: YES; OTHER_DETAILS: CHEMICALLY SYNTHESIZED BY A
AUTHOR K.TAKEUCHI,E.J.PARK,C.W.LEE,J.I.KIM,H.TAKAHASHI,K.J.SWARTZ, I.SHIMADA
DBREF 1KOZ A 1 36 UNP P60590 WGRTX_GRASP 1 36
SEQLENGTH 36
NCHAIN 1 chain(s) in 1KOZ data set
NALIGN 80
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : WGRTX_GRARO 1KOZ 1.00 1.00 1 36 50 85 36 0 0 87 P60590 Omega-theraphotoxin-Gr1a OS=Grammostola rosea PE=1 SV=2
2 : M5AXL3_GRARO 0.66 0.83 1 35 48 81 35 1 1 84 M5AXL3 GTx1-5-2 OS=Grammostola rosea PE=3 SV=1
3 : M5AY67_GRARO 0.66 0.83 1 35 48 81 35 1 1 84 M5AY67 GTx1-4-1 OS=Grammostola rosea PE=3 SV=1
4 : M5AYB3_GRARO 0.66 0.83 1 35 48 81 35 1 1 84 M5AYB3 GTx1-5-1 OS=Grammostola rosea PE=3 SV=1
5 : M5B4Q9_GRARO 0.66 0.83 1 35 48 81 35 1 1 84 M5B4Q9 GTx1-4-2 OS=Grammostola rosea PE=3 SV=1
6 : M5AWT1_GRARO 0.63 0.86 1 35 56 89 35 1 1 91 M5AWT1 GTx1-8-2 OS=Grammostola rosea PE=3 SV=1
7 : M5AXM1_GRARO 0.63 0.86 1 35 30 63 35 1 1 65 M5AXM1 GTx1-8-3 (Fragment) OS=Grammostola rosea PE=2 SV=1
8 : M5AYB8_GRARO 0.63 0.86 1 35 50 83 35 1 1 85 M5AYB8 GTx1-8-1 OS=Grammostola rosea PE=3 SV=1
9 : M5AY71_GRARO 0.60 0.77 1 35 31 64 35 1 1 67 M5AY71 GTx1-6 (Fragment) OS=Grammostola rosea PE=2 SV=1
10 : JZT60_CHIGU 0.58 0.70 1 33 69 100 33 1 1 103 B1P1H9 U28-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=2 SV=1
11 : M5AXM9_GRARO 0.58 0.67 1 33 48 78 33 1 2 83 M5AXM9 GTx1-13-1 OS=Grammostola rosea PE=3 SV=1
12 : M5B4R1_GRARO 0.58 0.67 1 33 8 38 33 1 2 43 M5B4R1 GTx1-10 (Fragment) OS=Grammostola rosea PE=2 SV=1
13 : M5AY76_GRARO 0.57 0.80 1 35 50 83 35 1 1 86 M5AY76 GTx1-9 OS=Grammostola rosea PE=3 SV=1
14 : M5B4R0_GRARO 0.57 0.77 1 35 50 83 35 1 1 86 M5B4R0 GTx1-7 OS=Grammostola rosea PE=3 SV=1
15 : TX2_HETMC 0.54 0.66 1 33 1 35 35 1 2 38 P60993 Kappa-theraphotoxin-Hm2a OS=Heteroscodra maculata PE=1 SV=1
16 : JZT34_CHIGU 0.53 0.66 2 33 52 82 32 1 1 87 B1P1F7 Mu-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
17 : JZT33_CHIGU 0.52 0.70 1 33 38 69 33 1 1 74 B1P1F6 U19-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
18 : M5AXK5_GRARO 0.52 0.64 1 33 51 81 33 1 2 86 M5AXK5 GTx1-3 OS=Grammostola rosea PE=3 SV=1
19 : H7CEK7_GRARO 0.51 0.63 1 35 48 80 35 1 2 83 H7CEK7 Toxin-like peptide OS=Grammostola rosea GN=GTx1-22 PE=3 SV=1
20 : JZT36_CHIGU 0.51 0.60 1 35 53 85 35 1 2 88 B1P1D7 U13-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
21 : TX1_HETMC 0.51 0.69 1 35 1 33 35 1 2 35 P60992 Kappa-theraphotoxin-Hm1a OS=Heteroscodra maculata PE=1 SV=1
22 : H9C01_HAPHA 0.50 0.65 2 35 52 83 34 1 2 86 D2Y238 Hainantoxin-IX-3 OS=Haplopelma hainanum PE=2 SV=1
23 : TX1_STRCF 0.50 0.64 1 36 1 34 36 1 2 34 P60991 Kappa-theraphotoxin-Sc1a OS=Stromatopelma calceatum PE=1 SV=1
24 : TX2_PSACA 0.50 0.59 2 35 3 34 34 1 2 35 P0C245 Tau-theraphotoxin-Pc1b OS=Psalmopoeus cambridgei PE=1 SV=1
25 : B3FIU4_HAPSC 0.49 0.66 1 35 51 83 35 1 2 86 B3FIU4 HWTX-V OS=Haplopelma schmidti PE=3 SV=1
26 : H13A1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A0 Hainantoxin-XIII OS=Haplopelma hainanum PE=2 SV=1
27 : H13A2_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A1 Hainantoxin-XIII.2 OS=Haplopelma hainanum PE=2 SV=1
28 : H13A3_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A2 Hainantoxin-XIII.3 OS=Haplopelma hainanum PE=2 SV=1
29 : H13A4_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2B2 Hainantoxin-XIII.4 OS=Haplopelma hainanum PE=2 SV=1
30 : H13A5_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2B3 Hainantoxin-XIII.5 OS=Haplopelma hainanum PE=2 SV=1
31 : H13A6_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2B4 Hainantoxin-XIII.6 OS=Haplopelma hainanum PE=2 SV=1
32 : H13A7_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2B5 Hainantoxin-XIII.7 OS=Haplopelma hainanum PE=2 SV=1
33 : H13A8_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2H5 Hainantoxin-XIII.8 OS=Haplopelma hainanum PE=2 SV=1
34 : H13C1_HAPHA 0.49 0.57 1 33 50 84 35 1 2 90 D2Y2A4 Hainantoxin-XIII-3 OS=Haplopelma hainanum PE=2 SV=1
35 : H13E1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A5 Hainantoxin-XIII-5 OS=Haplopelma hainanum PE=2 SV=1
36 : H13F1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A6 Hainantoxin-XIII-6 OS=Haplopelma hainanum PE=2 SV=1
37 : H13H1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A7 Hainantoxin-XIII-8 OS=Haplopelma hainanum PE=2 SV=1
38 : H13I1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2A8 Hainantoxin-XIII-9 OS=Haplopelma hainanum PE=2 SV=1
39 : H13K1_HAPHA 0.49 0.57 1 33 50 84 35 1 2 90 D2Y2B0 Hainantoxin-XIII-11 OS=Haplopelma hainanum PE=2 SV=1
40 : H13N1_HAPHA 0.49 0.60 1 33 50 84 35 1 2 90 D2Y2H4 Hainantoxin-XIII-14 OS=Haplopelma hainanum PE=2 SV=1
41 : H9B01_HAPHA 0.49 0.66 1 35 51 83 35 1 2 86 D2Y237 Hainantoxin-IX-2 OS=Haplopelma hainanum PE=1 SV=1
42 : H9B02_HAPHA 0.49 0.66 1 35 51 83 35 1 2 86 D2Y239 Hainantoxin-IX-2.2 OS=Haplopelma hainanum PE=1 SV=1
43 : H9B03_HAPHA 0.49 0.66 1 35 51 83 35 1 2 86 D2Y2L7 Hainantoxin-IX-2.3 OS=Haplopelma hainanum PE=1 SV=1
44 : JZ31A_CHIGU 0.49 0.66 1 35 51 83 35 1 2 86 B1P1F4 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
45 : JZ31B_CHIGU 0.49 0.66 1 35 51 83 35 1 2 86 B1P1F3 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
46 : JZ31C_CHIGU 0.49 0.66 1 35 51 83 35 1 2 86 P0CH56 U17-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
47 : JZT32_CHIGU 0.49 0.74 1 35 50 83 35 1 1 86 B1P1F5 U18-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
48 : JZT37_CHIGU 0.49 0.60 1 35 51 83 35 1 2 86 B1P1D8 U13-theraphotoxin-Cj1b OS=Chilobrachys guangxiensis PE=2 SV=1
49 : JZTX9_CHIGU 0.49 0.74 1 35 1 34 35 1 1 35 P0CH44 Jingzhaotoxin-9 OS=Chilobrachys guangxiensis PE=1 SV=1
50 : TXH5_HAPSC 0.49 0.66 1 35 51 83 35 1 2 86 P61104 Omega-theraphotoxin-Hh2a OS=Haplopelma schmidti PE=1 SV=2
51 : H12A1_HAPHA 0.48 0.58 1 33 62 92 33 1 2 97 D2Y2C1 Hainantoxin-XII OS=Haplopelma hainanum PE=2 SV=1
52 : H12A2_HAPHA 0.48 0.58 1 33 62 92 33 1 2 97 D2Y2H6 Hainantoxin-XII.2 OS=Haplopelma hainanum PE=2 SV=1
53 : H12A3_HAPHA 0.48 0.58 1 33 62 92 33 1 2 97 D2Y2H7 Hainantoxin-XII.3 OS=Haplopelma hainanum PE=2 SV=1
54 : H12A4_HAPHA 0.48 0.58 1 33 62 92 33 1 2 97 D2Y2H8 Hainantoxin-XII.4 OS=Haplopelma hainanum PE=2 SV=1
55 : H7A01_HAPHA 0.48 0.67 1 33 50 80 33 1 2 85 D2Y2C3 Hainantoxin-VII OS=Haplopelma hainanum PE=1 SV=1
56 : JZ521_CHIGU 0.48 0.73 1 33 1 32 33 1 1 35 P0CH51 Jingzhaotoxin F5-21.66 OS=Chilobrachys guangxiensis PE=1 SV=1
57 : D5J6X1_PELMU 0.47 0.58 1 36 51 84 36 1 2 84 D5J6X1 Putative mature peptide toxin-like GVDKE OS=Pelinobius muticus PE=3 SV=1
58 : D5J6X4_PELMU 0.47 0.58 1 36 51 84 36 1 2 84 D5J6X4 Putative mature peptide toxin-like GVDKE OS=Pelinobius muticus PE=3 SV=1
59 : TX1_STRGF 1LA4 0.47 0.59 2 35 2 33 34 1 2 34 P56855 Kappa-theraphotoxin-Scg1a OS=Stromatopelma calceatum griseipes PE=1 SV=1
60 : B1P1E2_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1E2 Cystine knot toxin OS=Chilobrachys guangxiensis GN=JZTX-XI.4 PE=3 SV=1
61 : H13B1_HAPHA 0.46 0.60 1 33 50 84 35 1 2 90 D2Y2A3 Hainantoxin-XIII-2 OS=Haplopelma hainanum PE=2 SV=1
62 : H13J1_HAPHA 0.46 0.60 1 33 50 84 35 1 2 90 D2Y2A9 Hainantoxin-XIII-10 OS=Haplopelma hainanum PE=2 SV=1
63 : H13L1_HAPHA 0.46 0.57 1 33 50 84 35 1 2 90 D2Y2B1 Hainantoxin-XIII-12 OS=Haplopelma hainanum PE=2 SV=1
64 : H13M1_HAPHA 0.46 0.57 1 33 50 84 35 1 2 90 D2Y2H3 Hainantoxin-XIII-13 OS=Haplopelma hainanum PE=2 SV=1
65 : H9A01_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y236 Hainantoxin-IX OS=Haplopelma hainanum PE=1 SV=1
66 : H9A02_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y2E8 Hainantoxin-IX.2 OS=Haplopelma hainanum PE=1 SV=1
67 : H9A03_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y2E9 Hainantoxin-IX.3 OS=Haplopelma hainanum PE=1 SV=1
68 : H9A04_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y2F0 Hainantoxin-IX.4 OS=Haplopelma hainanum PE=1 SV=1
69 : H9D01_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y2F1 Hainantoxin-IX-4 OS=Haplopelma hainanum PE=2 SV=1
70 : H9E01_HAPHA 0.46 0.66 1 35 51 83 35 1 2 86 D2Y2L5 Hainantoxin-IX-5 OS=Haplopelma hainanum PE=3 SV=1
71 : JZ11A_CHIGU 2A2V 0.46 0.63 1 35 51 83 35 1 2 86 P0C247 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=2
72 : JZ11B_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1E1 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
73 : JZ11C_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1E0 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
74 : JZ11D_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1D9 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
75 : JZ11E_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1E3 Kappa-theraphotoxin-Cj1a OS=Chilobrachys guangxiensis PE=1 SV=1
76 : JZT29_CHIGU 0.46 0.63 1 35 51 83 35 1 2 86 B1P1E4 Kappa-theraphotoxin-Cj1c OS=Chilobrachys guangxiensis PE=1 SV=1
77 : TX1_PSACA 0.46 0.57 1 35 2 34 35 1 2 35 P0C244 Tau/kappa-theraphotoxin-Pc1a OS=Psalmopoeus cambridgei PE=1 SV=1
78 : TX3_PSACA 0.46 0.63 1 35 1 33 35 1 2 34 P0C246 Tau-theraphotoxin-Pc1c OS=Psalmopoeus cambridgei PE=1 SV=1
79 : TXG2_CHIGU 0.46 0.63 1 35 1 33 35 1 2 33 P84837 Kappa-theraphotoxin-Pg2a OS=Chilobrachys guangxiensis PE=1 SV=1
80 : JZT42_CHIGU 0.44 0.64 1 36 19 53 36 1 1 55 B1P1A2 U2-theraphotoxin-Cj1a (Fragment) OS=Chilobrachys guangxiensis PE=2 SV=2
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A D 0 0 203 77 17 DEEEEEEEEEDDEEE EEDDE D EEEEEEEEEEEEGEEEEEEEEEEEEEGGGGEEGG EEEEEEEEEEE
2 2 A a - 0 0 70 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
3 3 A V - 0 0 42 81 34 VKKKKKKKKRRRKTRRRKRRRRTRRRRRRRRRRRRRRRRRRRRTTTTRTRRRRRRKKKRRRRRRRRRRRR
4 4 A R - 0 0 179 81 73 RQQQQWWWQWKKWKYEYYKKYWRWWYYYYYYYYYYYYYYYWWWKKKKKKWYYYYYKYYYKYYYYWWWWWW
5 5 A F S S+ 0 0 69 81 29 FFFFFFFFFFFFFFFWLYFMLYMFYFFFFFFFFFFFFFFFYYYFFFLMLYFFFFWLMMLMFFFFYYYYYY
6 6 A W S S+ 0 0 101 81 32 WWWWWWWWWWLLLWWLMWLFFLFLLWWWWWWWWWWWWWWWLLLLLLLFLLLLLLLFFFFFWWWWLLLLLL
7 7 A G - 0 0 10 81 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
8 8 A K B +A 29 0A 165 81 59 KSSSSSSSSAAACWEGGKGGGGAGGEEEEEEEEEEEEEEEGGGGGGGGGGEEEETGSSGGEEEEGGGGGE
9 9 A b - 0 0 7 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A S - 0 0 101 81 78 SSSSSTTTTKTTSKNSSEDSSSRKSHHHHHHHHHHHHHHHSSSSSSTSTSKKKKSTGGKSHHHHSSSSSS
11 11 A Q S S+ 0 0 160 81 74 QKRKRKKKGSQQRQDKKKQKSQRSQDDDDDDDDDDDDDDDQQQEEEKKKQKKKKKTKKTVDDDDQQQQQQ
12 12 A T S S+ 0 0 112 81 63 TDDDDDDDDDTTNDEDDNDHTDDTDHHHHHHHHHHRHHHPDDDDDDDHDDTTTTTSSSTDHHHHDDDDDD
13 13 A S S S+ 0 0 128 81 78 SSSSSSSSWSSSSSMAGSSESGSSGMMMMMMMMMMMMMMMGGGSSSSESGSSSSGSDDASMMMMGGGGGG
14 14 A D S S+ 0 0 47 81 52 DDDDDDDDDDDDDEVDDDNDDDDDDPPPPPPPPPPPPPPPDDDEEEEDEDEEEEDEDDDDPPPPDDDDDD
15 15 A c S S- 0 0 21 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
16 16 A a > - 0 0 42 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A P T 3 S+ 0 0 121 81 71 PKKKKKKKKRKKKEEAEKEAKKPEKDDDDDDDDDDDDDDDKKKPPPPAPKEEEESAPPKADDDDKKKKKK
18 18 A H T 3 S+ 0 0 133 81 54 HHHHHHHHHYHHHHHHHHHHHHHHHWWWWWWWWWWWWWWWHHHHHHHHHHHHHHHHKKHHWWWWHHHHHH
19 19 A L E < S-B 32 0B 23 81 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLL
20 20 A A E -B 31 0B 20 81 75 AGGGGGGGGGAATGVEVQVASQGSQVVVVVVVVVVVVVVVQQQGGGGAGQAAAASGAAAGVVVVQQQQQQ
21 21 A b S S+ 0 0 41 81 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A K - 0 0 127 80 54 KKKKKKKKKKHHNRKRREHKRH.KHRRRRRRRRRRRRRGRHHHKKKRKRHHHHHSKKKRKRRRRHHHHHH
23 23 A S - 0 0 11 80 101 SRRRRPPPRRNNPSEKTSNRSS.MSYYYYYYYYYCYYYYYSSSDDDKRKSDDDDPQRRSPYYYYSSSSSS
24 24 A K S S- 0 0 161 81 61 KKKKKKKKKKKKKKKKKYKTDNKGNKKKKKKKKKKKKKKKNNNVVVKTKNKKKKKKTTDTKKKKNNNNNN
25 25 A W S S+ 0 0 202 81 54 WWWWWWWWWWHHSWWWWWHFWYPLYWWWWWWWWWWWWWWWYYYLLLWFWYHHHHHWFFGLWWWWYYYYYY
26 26 A P S S- 0 0 49 80 77 PPPPPPPPPPKKPPpPPKKN.ETDEpppppppppppppppEEEYYYPNPEKKKKGPNNKKpslpEEEEEE
27 27 A R S S+ 0 0 159 23 101 R.............y.......S..yyyyyyyyyyyyyyy....................yyyy......
28 28 A N S S+ 0 0 99 41 64 NNNNNHHHNN..HYKYY...K.K..NNNNNNNNNNNNNNN......Y.Y......F....NNNN......
29 29 A I B S-A 8 0A 14 81 76 IIIIIIIIIIWWILIHHWWYYWYYWIIIIIIIIIIIIIIIWWWYYYHYHWWWWWWYYYYYIIIIWWWWWW
30 30 A c - 0 0 2 81 3 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCRCCCCCC
31 31 A V E -B 20 0B 13 81 57 VLLLLVVVLLAAVAVVVIVAAVAAVVVVVVVVVVVVVVVVVVVAAAGAGVAAAAVAAAAAVVVVIIIIII
32 32 A W E -B 19 0B 122 81 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
33 33 A D + 0 0 63 81 27 DDDDDDDDDSDDDDDDDDDDDDDDDNNNNNNNNSNNNNNNDDDDDDDDDDDDDDDDDDDDNNNNDDDDDD
34 34 A G + 0 0 45 49 0 GGGGGGGGG GG GGGGGGG GGGGGGGGGG GGGG GGGGGG
35 35 A S 0 0 114 49 24 STTTTTTTT TT TSTTTTT TTTTTTTSTT SSTT TTTTTT
36 36 A V 0 0 206 6 9 V I VV
## ALIGNMENTS 71 - 80
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A D 0 0 203 77 17 EEEEEEEEEE
2 2 A a - 0 0 70 81 0 CCCCCCCCCC
3 3 A V - 0 0 42 81 34 RRRRRRRRRR
4 4 A R - 0 0 179 81 73 KKKKKKWWKW
5 5 A F S S+ 0 0 69 81 29 MMMMMMFYMM
6 6 A W S S+ 0 0 101 81 32 FFFFFFMLFF
7 7 A G - 0 0 10 81 0 GGGGGGGGGG
8 8 A K B +A 29 0A 165 81 59 GGGGGGGGGG
9 9 A b - 0 0 7 81 0 CCCCCCCCCC
10 10 A S - 0 0 101 81 78 SSSSSSDKST
11 11 A Q S S+ 0 0 160 81 74 VVVVVVSEVT
12 12 A T S S+ 0 0 112 81 63 DDDDDHTDDD
13 13 A S S S+ 0 0 128 81 78 SSSSSSLSSS
14 14 A D S S+ 0 0 47 81 52 DDDDDDDEDD
15 15 A c S S- 0 0 21 81 0 CCCCCCCCCC
16 16 A a > - 0 0 42 81 0 CCCCCCCCCC
17 17 A P T 3 S+ 0 0 121 81 71 AAAAAAKEAE
18 18 A H T 3 S+ 0 0 133 81 54 HHHHHHHHHH
19 19 A L E < S-B 32 0B 23 81 0 LLLLLLLLLL
20 20 A A E -B 31 0B 20 81 75 GGGGGGSQGG
21 21 A b S S+ 0 0 41 81 0 CCCCCCCCCC
22 22 A K - 0 0 127 80 54 KKKKKKKHKR
23 23 A S - 0 0 11 80 101 PPPPPPMSPW
24 24 A K S S- 0 0 161 81 61 TTTTTTGYTE
25 25 A W S S+ 0 0 202 81 54 LLLLLLLWLK
26 26 A P S S- 0 0 49 80 77 KKKKKKYEKP
27 27 A R S S+ 0 0 159 23 101 ..........
28 28 A N S S+ 0 0 99 41 64 .........S
29 29 A I B S-A 8 0A 14 81 76 YYYYYYYWYW
30 30 A c - 0 0 2 81 3 CCCCCCCCCC
31 31 A V E -B 20 0B 13 81 57 AAAAAAALAA
32 32 A W E -B 19 0B 122 81 0 WWWWWWWWWW
33 33 A D + 0 0 63 81 27 DDDDDDDDDD
34 34 A G + 0 0 45 49 0 GGGGGGGGGG
35 35 A S 0 0 114 49 24 TTTTTTTSTT
36 36 A V 0 0 206 6 9 V
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 82 0 9 77 0 0 0.600 20 0.82
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
3 3 A 2 0 0 0 0 0 0 0 0 0 0 9 0 0 73 16 0 0 0 0 81 0 0 0.827 27 0.65
4 4 A 0 0 0 0 0 26 38 0 0 0 0 0 0 0 4 25 6 1 0 0 81 0 0 1.411 47 0.27
5 5 A 0 7 0 17 56 2 17 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.218 40 0.70
6 6 A 0 36 0 2 21 41 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.153 38 0.67
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
8 8 A 0 0 0 0 0 1 0 44 5 0 12 1 1 0 0 4 0 31 0 0 81 0 0 1.415 47 0.41
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
10 10 A 0 0 0 0 0 0 0 2 0 0 44 12 0 23 1 11 0 1 1 2 81 0 0 1.548 51 0.21
11 11 A 10 0 0 0 0 0 0 1 0 0 5 4 0 0 5 23 22 5 0 25 81 0 0 1.870 62 0.26
12 12 A 0 0 0 0 0 0 0 0 0 1 4 16 0 25 1 0 0 1 2 49 81 0 0 1.364 45 0.37
13 13 A 0 1 0 25 0 1 0 17 2 0 48 0 0 0 0 0 0 2 0 2 81 0 0 1.383 46 0.21
14 14 A 1 0 0 0 0 0 0 0 0 23 0 0 0 0 0 0 0 15 1 59 81 0 0 1.042 34 0.48
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
17 17 A 0 0 0 0 0 0 0 0 15 12 1 0 0 0 1 33 0 14 0 23 81 0 0 1.627 54 0.28
18 18 A 0 0 0 0 0 23 1 0 0 0 0 0 0 73 0 2 0 0 0 0 81 0 0 0.717 23 0.46
19 19 A 0 99 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 0.067 2 0.99
20 20 A 27 0 0 0 0 0 0 32 16 0 5 1 0 0 0 0 17 1 0 0 81 0 0 1.573 52 0.24
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 81 1 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 1 0 0 1 0 0 25 32 38 0 1 1 0 80 0 0 1.299 43 0.45
23 23 A 0 0 0 3 0 1 22 0 0 16 24 1 1 0 13 4 1 1 4 9 80 0 0 2.058 68 -0.02
24 24 A 4 0 0 0 0 0 2 2 0 0 0 15 0 0 0 58 0 1 15 2 81 0 0 1.332 44 0.38
25 25 A 0 16 0 0 5 49 15 1 0 1 1 0 0 10 0 1 0 0 0 0 81 1 0 1.519 50 0.46
26 26 A 0 1 0 0 0 0 5 1 0 46 1 1 0 0 0 21 0 16 5 1 80 57 20 1.554 51 0.22
27 27 A 0 0 0 0 0 0 87 0 0 0 4 0 0 0 9 0 0 0 0 0 23 0 0 0.470 15 -0.02
28 28 A 0 0 0 0 2 0 12 0 0 0 2 0 0 10 0 7 0 0 66 0 41 0 0 1.131 37 0.36
29 29 A 0 1 40 0 0 28 26 0 0 0 0 0 0 5 0 0 0 0 0 0 81 0 0 1.277 42 0.23
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 0 0 81 0 0 0.067 2 0.97
31 31 A 44 9 9 0 0 0 0 2 36 0 0 0 0 0 0 0 0 0 0 0 81 0 0 1.243 41 0.43
32 32 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 81 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 22 75 81 0 0 0.639 21 0.73
34 34 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
35 35 A 0 0 0 0 0 0 0 0 0 0 14 86 0 0 0 0 0 0 0 0 49 0 0 0.410 13 0.76
36 36 A 83 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0.451 15 0.91
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
15 27 27 2 pITy
26 27 76 2 pITy
27 27 76 2 pITy
28 27 76 2 pITy
29 27 76 2 pITy
30 27 76 2 pITy
31 27 76 2 pITy
32 27 76 2 pITy
33 27 76 2 pITy
34 27 76 2 pITy
35 27 76 2 pITy
36 27 76 2 pITy
37 27 76 2 pITy
38 27 76 2 pIAy
39 27 76 2 pITy
40 27 76 2 pITy
61 27 76 2 pITy
62 27 76 2 sITy
63 27 76 2 lITy
64 27 76 2 pITy
//