Complet list of 1kn7 hssp file
Complete list of 1kn7.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1KN7
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-02
HEADER MEMBRANE PROTEIN 18-DEC-01 1KN7
COMPND MOL_ID: 1; MOLECULE: VOLTAGE-GATED POTASSIUM CHANNEL PROTEIN KV1.4; CH
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; ORGANISM_COMMON: NO
AUTHOR R.WISSMANN,W.BILDL,D.OLIVER,M.BEYERMANN,H.R.KALBITZER, D.BENTROP,B.FAK
DBREF 1KN7 A 1 75 UNP P15385 KCNA4_RAT 1 75
SEQLENGTH 75
NCHAIN 1 chain(s) in 1KN7 data set
NALIGN 47
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G3V6L7_RAT 1.00 1.00 1 75 1 75 75 0 0 654 G3V6L7 Potassium voltage-gated channel subfamily A member 4 OS=Rattus norvegicus GN=Kcna4 PE=4 SV=1
2 : KCNA4_MOUSE 1.00 1.00 1 75 1 75 75 0 0 654 Q61423 Potassium voltage-gated channel subfamily A member 4 OS=Mus musculus GN=Kcna4 PE=1 SV=2
3 : KCNA4_RAT 1.00 1.00 1 75 1 75 75 0 0 655 P15385 Potassium voltage-gated channel subfamily A member 4 OS=Rattus norvegicus GN=Kcna4 PE=1 SV=1
4 : G3GZ96_CRIGR 0.97 0.97 1 75 1 75 75 0 0 654 G3GZ96 Potassium voltage-gated channel subfamily A member 4 OS=Cricetulus griseus GN=I79_003156 PE=4 SV=1
5 : I3N544_SPETR 0.95 0.99 1 75 1 75 75 0 0 654 I3N544 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=KCNA4 PE=4 SV=1
6 : F1SGM9_PIG 0.93 0.97 1 75 1 75 75 0 0 654 F1SGM9 Uncharacterized protein OS=Sus scrofa GN=LOC100037947 PE=4 SV=1
7 : F6VKX0_CALJA 0.93 0.99 1 75 1 75 75 0 0 652 F6VKX0 Uncharacterized protein OS=Callithrix jacchus GN=KCNA4 PE=4 SV=1
8 : F7IQA3_CALJA 0.93 0.99 1 75 1 75 75 0 0 653 F7IQA3 Potassium voltage-gated channel subfamily A member 4 OS=Callithrix jacchus GN=KCNA4 PE=2 SV=1
9 : G1S871_NOMLE 0.93 0.99 1 75 1 75 75 0 0 652 G1S871 Uncharacterized protein OS=Nomascus leucogenys GN=KCNA4 PE=4 SV=1
10 : G3QWK8_GORGO 0.93 0.99 1 75 1 75 75 0 0 653 G3QWK8 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101142565 PE=4 SV=1
11 : G3S8C4_GORGO 0.93 0.99 1 75 1 75 75 0 0 637 G3S8C4 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101142565 PE=4 SV=1
12 : H2Q3C2_PANTR 0.93 0.99 1 75 1 75 75 0 0 653 H2Q3C2 Uncharacterized protein OS=Pan troglodytes GN=KCNA4 PE=4 SV=1
13 : KCNA4_HUMAN 0.93 0.99 1 75 1 75 75 0 0 653 P22459 Potassium voltage-gated channel subfamily A member 4 OS=Homo sapiens GN=KCNA4 PE=1 SV=2
14 : KCNA4_MUSPF 0.93 0.99 1 75 1 75 75 0 0 654 Q28527 Potassium voltage-gated channel subfamily A member 4 OS=Mustela putorius furo GN=KCNA4 PE=2 SV=1
15 : Q5REB6_PONAB 0.93 0.99 1 75 1 75 75 0 0 653 Q5REB6 Putative uncharacterized protein DKFZp459N0126 OS=Pongo abelii GN=DKFZp459N0126 PE=2 SV=1
16 : F6QDP8_MACMU 0.92 0.97 1 75 1 74 75 1 1 652 F6QDP8 Uncharacterized protein OS=Macaca mulatta GN=KCNA4 PE=4 SV=1
17 : F7EUZ9_MONDO 0.92 0.96 1 75 1 77 77 1 2 658 F7EUZ9 Uncharacterized protein OS=Monodelphis domestica GN=KCNA4 PE=4 SV=1
18 : G3U8V1_LOXAF 0.92 0.97 1 75 1 75 75 0 0 638 G3U8V1 Uncharacterized protein OS=Loxodonta africana GN=KCNA4 PE=4 SV=1
19 : G3W191_SARHA 0.92 0.95 1 75 1 77 77 1 2 606 G3W191 Uncharacterized protein OS=Sarcophilus harrisii GN=KCNA4 PE=4 SV=1
20 : G7PQH8_MACFA 0.92 0.97 1 75 1 74 75 1 1 652 G7PQH8 Voltage-gated potassium channel subunit Kv1.4 OS=Macaca fascicularis GN=EGM_05762 PE=4 SV=1
21 : H0XIB5_OTOGA 0.92 0.99 1 75 1 75 75 0 0 654 H0XIB5 Uncharacterized protein OS=Otolemur garnettii GN=KCNA4 PE=4 SV=1
22 : L5KX80_PTEAL 0.92 0.99 1 75 1 75 75 0 0 652 L5KX80 Potassium voltage-gated channel subfamily A member 4 OS=Pteropus alecto GN=PAL_GLEAN10018014 PE=4 SV=1
23 : M3XDS9_FELCA 0.92 0.99 1 75 1 75 75 0 0 655 M3XDS9 Uncharacterized protein OS=Felis catus GN=KCNA4 PE=4 SV=1
24 : Q8MJD4_RABIT 0.92 0.98 12 75 1 64 64 0 0 641 Q8MJD4 Potassium channel alpha subunit Kv1.4 (Fragment) OS=Oryctolagus cuniculus PE=2 SV=1
25 : W5PA81_SHEEP 0.92 0.96 1 75 1 75 75 0 0 662 W5PA81 Uncharacterized protein OS=Ovis aries GN=KCNA4 PE=4 SV=1
26 : F1MFZ3_BOVIN 0.91 0.93 1 75 1 76 76 1 1 661 F1MFZ3 Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus GN=KCNA4 PE=4 SV=1
27 : KCNA4_BOVIN 0.91 0.95 1 75 1 75 75 0 0 660 Q05037 Potassium voltage-gated channel subfamily A member 4 OS=Bos taurus GN=KCNA4 PE=2 SV=1
28 : Q9GLF1_BOVIN 0.91 0.93 1 75 1 76 76 1 1 661 Q9GLF1 Voltage-gated K+ channel Kv1.4 OS=Bos taurus PE=2 SV=1
29 : F6RH21_ORNAN 0.90 0.94 1 70 1 72 72 1 2 661 F6RH21 Uncharacterized protein OS=Ornithorhynchus anatinus GN=KCNA4 PE=4 SV=1
30 : G1PSL7_MYOLU 0.90 0.95 1 75 1 77 77 1 2 657 G1PSL7 Uncharacterized protein OS=Myotis lucifugus GN=KCNA4 PE=4 SV=1
31 : G1KA04_ANOCA 0.86 0.91 1 69 1 70 70 1 1 662 G1KA04 Uncharacterized protein OS=Anolis carolinensis GN=KCNA4 PE=4 SV=2
32 : Q9PWM8_CHICK 0.85 0.92 1 66 1 66 66 0 0 483 Q9PWM8 Potassium channel Shaker alpha subunit variant cKv1.4(M) OS=Gallus gallus PE=2 SV=1
33 : Q9YGX8_CHICK 0.83 0.90 1 69 1 70 70 1 1 662 Q9YGX8 Potassium channel Shaker cKv1.4 OS=Gallus gallus GN=KCNA4 PE=2 SV=1
34 : H0Z2W9_TAEGU 0.81 0.93 1 69 1 70 70 1 1 660 H0Z2W9 Uncharacterized protein OS=Taeniopygia guttata GN=KCNA4 PE=4 SV=1
35 : Q90W36_COLLI 0.81 0.90 1 69 1 70 70 1 1 662 Q90W36 Potassium channel shaker alpha subunit pKv 1.4 OS=Columba livia PE=2 SV=1
36 : F1PU39_CANFA 0.80 0.88 1 68 1 69 69 1 1 666 F1PU39 Uncharacterized protein OS=Canis familiaris GN=KCNA4 PE=4 SV=2
37 : R0LGU6_ANAPL 0.80 0.90 1 69 1 70 70 1 1 662 R0LGU6 Potassium voltage-gated channel subfamily A member 4 (Fragment) OS=Anas platyrhynchos GN=Anapl_04818 PE=4 SV=1
38 : U3KCM9_FICAL 0.70 0.88 1 74 1 76 76 1 2 650 U3KCM9 Uncharacterized protein OS=Ficedula albicollis GN=KCNA4 PE=4 SV=1
39 : I3L9C7_PIG 0.68 0.76 1 75 1 60 75 1 15 596 I3L9C7 Uncharacterized protein OS=Sus scrofa GN=KCNA4 PE=4 SV=1
40 : F6V7J2_XENTR 0.60 0.75 1 73 1 70 73 2 3 636 F6V7J2 Uncharacterized protein OS=Xenopus tropicalis GN=kcna4 PE=4 SV=1
41 : W5KF13_ASTMX 0.58 0.72 1 71 1 68 72 2 5 688 W5KF13 Uncharacterized protein OS=Astyanax mexicanus GN=KCNA4 PE=4 SV=1
42 : Q8JG57_XENLA 0.53 0.71 1 68 1 69 70 2 3 697 Q8JG57 Shaker-like potassium channel Kv1.4 OS=Xenopus laevis PE=2 SV=1
43 : Q98TW3_XENLA 0.53 0.71 1 68 1 69 70 2 3 677 Q98TW3 Kv1.4 potassium channel OS=Xenopus laevis GN=kcna4 PE=2 SV=1
44 : K7FXT7_PELSI 0.52 0.76 1 75 1 74 75 1 1 649 K7FXT7 Uncharacterized protein OS=Pelodiscus sinensis GN=KCNA4 PE=4 SV=1
45 : U3I8V1_ANAPL 0.47 0.68 1 68 1 68 68 0 0 617 U3I8V1 Uncharacterized protein OS=Anas platyrhynchos GN=KCNA4 PE=4 SV=1
46 : G5C6P0_HETGA 0.37 0.53 1 75 145 217 75 1 2 727 G5C6P0 Potassium voltage-gated channel subfamily A member 4 OS=Heterocephalus glaber GN=GW7_02804 PE=4 SV=1
47 : V8PEB8_OPHHA 0.34 0.45 1 70 1 62 71 2 10 560 V8PEB8 Potassium voltage-gated channel subfamily A member 4 (Fragment) OS=Ophiophagus hannah GN=KCNA4 PE=4 SV=1
## ALIGNMENTS 1 - 47
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 228 47 0 MMMMMMMMMMMMMMMMMMMMMMM MMMMMMMMMMMMMMMMMMMMMMM
2 2 A E + 0 0 192 47 0 EEEEEEEEEEEEEEEEEEEEEEE EEEEEEEEEEEEEEEEEEEEEEE
3 3 A V - 0 0 124 47 6 VVVVVVVVVVVVVVVVVVVVVVV VVVVVVVVVVVVVVVVFVVVVVV
4 4 A A - 0 0 80 47 0 AAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
5 5 A M - 0 0 185 47 0 MMMMMMMMMMMMMMMMMMMMMMM MMMMMMMMMMMMMMMMMMMMMMM
6 6 A V - 0 0 134 47 0 VVVVVVVVVVVVVVVVVVVVVVV VVVVVVVVVVVVVVVVVVVVVVV
7 7 A S - 0 0 99 47 4 SSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSGSSSSSS
8 8 A A + 0 0 108 47 0 AAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAA
9 9 A E - 0 0 135 47 18 EEEEEEEEEEEEEEEEEEEEEEE EEEEEEEDDDDEDDEDDDDEDEE
10 10 A S > - 0 0 69 47 0 SSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSS
11 11 A S T 4 S- 0 0 98 47 4 SSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSSSGSSSSSS
12 12 A G T 4 S- 0 0 73 48 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
13 13 A C T 4 S+ 0 0 82 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 14 A N S < S+ 0 0 140 48 19 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSSNNNN
15 15 A S + 0 0 71 48 26 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSPNNSSSS
16 16 A H - 0 0 124 48 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
17 17 A M - 0 0 151 48 5 MMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMMMLMLMLLMMLM
18 18 A P - 0 0 129 48 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
19 19 A Y + 0 0 168 48 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
20 20 A G S > S+ 0 0 52 48 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
21 21 A Y G > S+ 0 0 193 47 35 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY.YYYYYQG
22 22 A A G > S+ 0 0 28 48 26 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAYAAAAAES
23 23 A A G X S+ 0 0 64 48 63 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVAVAVAAAQQQVVIE
24 24 A Q G X> + 0 0 126 48 32 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAQQDE
25 25 A A H <> S+ 0 0 64 48 51 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAArRRAARK
26 26 A R H <> S+ 0 0 209 45 13 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRr..RRM.
27 27 A A H <> S+ 0 0 37 47 18 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEAAAAQ.
28 28 A R H < S+ 0 0 204 47 6 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRK.
29 29 A E H < S+ 0 0 157 47 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEV.
30 30 A R H >X S+ 0 0 193 47 16 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRI.
31 31 A E G >< S+ 0 0 121 47 19 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEGS.
32 32 A R G 34 S+ 0 0 194 47 29 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRGI.
33 33 A L G X4 S+ 0 0 117 47 43 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLEQQLGL.
34 34 A A T << S+ 0 0 51 47 31 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAARAAAGR.
35 35 A H T 3 S+ 0 0 162 48 50 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQQQQQQQQHHHHHHPII
36 36 A S S < S+ 0 0 100 48 27 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSYSL
37 37 A R S > S+ 0 0 199 48 37 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRGHLK
38 38 A A T 3 S+ 0 0 83 47 33 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAGHSD
39 39 A A T 3 S+ 0 0 101 47 40 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAATAYDL
40 40 A A < + 0 0 50 47 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAASHLS
41 41 A A + 0 0 80 47 34 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAGQKE
42 42 A A > + 0 0 60 47 35 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAGELD
43 43 A A H > S+ 0 0 100 47 23 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAGQAE
44 44 A V H 4 S+ 0 0 87 47 59 VVVGVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV.AAAAGSID
45 45 A A H 4 S+ 0 0 68 47 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG.AASSPREE
46 46 A A H < S+ 0 0 99 47 44 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG.GAGGYGGE
47 47 A A S < S+ 0 0 54 47 47 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG.EAEEHATD
48 48 A T S S- 0 0 111 47 61 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG.GAGGHSID
49 49 A A - 0 0 77 47 53 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG.GAGGYSIE
50 50 A A S S- 0 0 84 47 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG.NANNHSMD
51 51 A V S S+ 0 0 147 47 69 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAVG.SASSQHSV
52 52 A E + 0 0 160 47 46 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEG.GAGGIGED
53 53 A G + 0 0 74 48 27 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGEAGAGDGGQGEG
54 54 A T + 0 0 125 48 55 TTTTSSSSSSSSSSSSSSSSSSSSGGGGGSGGGGGGGGAGSGGSNEE
55 55 A G + 0 0 81 48 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSAAAAVAGAAGAARAED
56 56 A G - 0 0 77 48 43 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTATGTGACAGGGSEE
57 57 A S + 0 0 132 47 75 SSSSSSSSSSSSSSSSSSSSPSSSSSSSSPGGGGGGGGXQTVVAREE
58 58 A G - 0 0 80 48 34 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGPGGGGGNNSSEG
59 59 A G - 0 0 87 48 35 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAEAASSGE
60 60 A G - 0 0 61 48 55 GGGGGGGGGGGGGGGSgGgSGGSGGgSggggGggggggGGGrrSLEe
61 61 A P - 0 0 138 42 87 PPPPSTSSSSSSSSS.sSs.SSSSAqQqshhPyyyayhT..pp.P.i
62 62 A H - 0 0 151 45 44 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHYH..QQHN.F
63 63 A H - 0 0 182 47 55 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHHR.NNDRGY
64 64 A H + 0 0 132 47 68 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHYYYQYQHA.QQGQEY
65 65 A H S S- 0 0 157 48 69 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHEHPGVVNSEN
66 66 A Q - 0 0 171 48 58 QQQQQQQQQQQQQQQQQQQQQQQQPPPPQQQHQQQQQQQAGPPAGEN
67 67 A T - 0 0 125 47 73 TTTMTSSSSSSSSSSSTSNSSSSSSSSSPSE EEEQESSTTEEPKAE
68 68 A R - 0 0 216 47 48 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQ QQQHQRRQGQRHRRD
69 69 A G + 0 0 75 43 38 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG GAS SGGGG S FG
70 70 A A + 0 0 76 38 68 AAAAAAAAAAAAAAAATAAAASAAAAAATA AANT S YE
71 71 A Y - 0 0 211 36 52 YYYYCCCCCCCCCCCCCCCCCCCCCCCC C SCSC L Y
72 72 A S - 0 0 120 35 63 SSSSTTTTTTTTTTTTSISTTTTTTTTT T STG P S
73 73 A S + 0 0 92 35 51 SSSSSSSSSSSSSSSSSSSSSSSSSSSS S SSA W E
74 74 A H 0 0 194 34 25 HHHHHHHHHHHHHHHHHQHHHHHHHHHH H QH H Q
75 75 A D 0 0 215 33 14 DDDDDDDDDDDDDDDDDDDDDDDDDDDD D D Q D
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 47 0 0 0.000 0 1.00
3 3 A 98 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.93
4 4 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
5 5 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
6 6 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
7 7 A 0 0 0 0 0 0 0 2 0 0 98 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.95
8 8 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 77 0 23 47 0 0 0.544 18 0.82
10 10 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 2 0 0 98 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.95
12 12 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
14 14 A 0 0 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 94 0 48 0 0 0.234 7 0.81
15 15 A 0 0 0 0 0 0 0 0 0 2 90 4 0 0 0 0 0 0 4 0 48 0 0 0.444 14 0.73
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 48 0 0 0.000 0 1.00
17 17 A 0 13 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.377 12 0.95
18 18 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
19 19 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
20 20 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 48 1 0 0.000 0 1.00
21 21 A 0 0 0 0 0 0 96 2 0 0 0 0 0 0 0 0 2 0 0 0 47 0 0 0.205 6 0.64
22 22 A 0 0 0 0 0 0 2 0 94 0 2 0 0 0 0 0 0 2 0 0 48 0 0 0.302 10 0.73
23 23 A 13 0 2 0 0 0 0 0 77 0 0 0 0 0 0 0 6 2 0 0 48 0 0 0.795 26 0.37
24 24 A 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 90 2 0 2 48 0 0 0.433 14 0.67
25 25 A 0 0 0 0 0 0 0 0 90 0 0 0 0 0 8 2 0 0 0 0 48 3 1 0.386 12 0.48
26 26 A 0 0 0 2 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 45 0 0 0.107 3 0.86
27 27 A 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 0 2 2 0 0 47 0 0 0.205 6 0.82
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 2 0 0 0 0 47 0 0 0.103 3 0.94
29 29 A 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 0 47 0 0 0.103 3 0.85
30 30 A 0 0 2 0 0 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 47 0 0 0.103 3 0.84
31 31 A 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 96 0 0 47 0 0 0.205 6 0.81
32 32 A 0 0 2 0 0 0 0 2 0 0 0 0 0 0 96 0 0 0 0 0 47 0 0 0.205 6 0.70
33 33 A 0 91 0 0 0 0 0 2 0 0 0 0 0 0 0 0 4 2 0 0 47 0 0 0.380 12 0.57
34 34 A 0 0 0 0 0 0 0 2 94 0 0 0 0 0 4 0 0 0 0 0 47 0 0 0.278 9 0.69
35 35 A 0 0 4 0 0 0 0 0 0 2 0 0 0 77 0 0 17 0 0 0 48 0 0 0.712 23 0.49
36 36 A 0 2 0 0 0 0 2 0 0 0 96 0 0 0 0 0 0 0 0 0 48 0 0 0.202 6 0.72
37 37 A 0 2 0 0 0 0 0 2 0 0 0 0 0 2 92 2 0 0 0 0 48 1 0 0.402 13 0.62
38 38 A 0 0 0 0 0 0 0 2 91 0 2 0 0 2 0 0 0 0 0 2 47 0 0 0.409 13 0.66
39 39 A 0 2 0 0 0 0 2 0 91 0 0 2 0 0 0 0 0 0 0 2 47 0 0 0.409 13 0.59
40 40 A 0 2 0 0 0 0 0 0 91 0 4 0 0 2 0 0 0 0 0 0 47 0 0 0.380 12 0.61
41 41 A 0 0 0 0 0 0 0 2 91 0 0 0 0 0 0 2 2 2 0 0 47 0 0 0.409 13 0.65
42 42 A 0 2 0 0 0 0 0 2 91 0 0 0 0 0 0 0 0 2 0 2 47 0 0 0.409 13 0.65
43 43 A 0 0 0 0 0 0 0 2 94 0 0 0 0 0 0 0 2 2 0 0 47 0 0 0.308 10 0.77
44 44 A 81 0 2 0 0 0 0 4 9 0 2 0 0 0 0 0 0 0 0 2 47 0 0 0.762 25 0.41
45 45 A 0 0 0 0 0 0 0 2 85 2 4 0 0 0 2 0 0 4 0 0 47 0 0 0.652 21 0.49
46 46 A 0 0 0 0 0 0 2 13 83 0 0 0 0 0 0 0 0 2 0 0 47 0 0 0.581 19 0.55
47 47 A 0 0 0 0 0 0 0 2 85 0 0 2 0 2 0 0 0 6 0 2 47 0 0 0.641 21 0.52
48 48 A 0 0 2 0 0 0 0 9 2 0 2 81 0 2 0 0 0 0 0 2 47 0 0 0.791 26 0.39
49 49 A 0 0 2 0 0 0 2 9 83 0 2 0 0 0 0 0 0 2 0 0 47 0 0 0.692 23 0.46
50 50 A 0 0 0 2 0 0 0 2 83 0 2 0 0 2 0 0 0 0 6 2 47 0 0 0.740 24 0.41
51 51 A 81 0 0 0 0 0 0 2 4 0 9 0 0 2 0 0 2 0 0 0 47 0 0 0.762 25 0.30
52 52 A 0 0 2 0 0 0 0 11 4 0 0 0 0 0 0 0 0 81 0 2 47 0 0 0.708 23 0.54
53 53 A 0 0 0 0 0 0 0 85 4 0 0 2 0 0 0 0 2 4 0 2 48 0 0 0.641 21 0.72
54 54 A 0 0 0 0 0 0 0 33 2 0 48 10 0 0 0 0 0 4 2 0 48 0 0 1.248 41 0.44
55 55 A 2 0 0 0 0 0 0 69 21 0 2 0 0 0 2 0 0 2 0 2 48 0 0 0.988 32 0.48
56 56 A 0 0 0 0 0 0 0 77 6 0 2 8 2 0 0 0 0 4 0 0 48 0 0 0.875 29 0.56
57 57 A 4 0 0 0 0 0 0 17 2 4 62 2 0 0 2 0 2 4 0 0 47 0 0 1.330 44 0.24
58 58 A 0 0 0 0 0 0 0 88 0 2 4 0 0 0 0 0 0 2 4 0 48 0 0 0.543 18 0.66
59 59 A 0 0 0 0 0 0 0 85 6 0 4 0 0 0 0 0 0 4 0 0 48 0 0 0.573 19 0.65
60 60 A 0 2 0 0 0 0 0 79 0 0 10 0 0 0 4 0 0 4 0 0 48 6 16 0.766 25 0.44
61 61 A 0 0 2 0 0 0 10 0 5 21 43 5 0 7 0 0 7 0 0 0 42 0 0 1.673 55 0.12
62 62 A 0 0 0 0 2 0 4 0 0 0 0 0 0 87 0 0 4 0 2 0 45 0 0 0.570 19 0.56
63 63 A 0 0 0 0 0 0 2 2 0 0 0 0 0 83 4 0 2 0 4 2 47 0 0 0.751 25 0.45
64 64 A 0 0 0 0 0 0 13 2 2 0 0 0 0 70 0 0 11 2 0 0 47 0 0 0.995 33 0.32
65 65 A 4 0 0 0 0 0 2 2 0 2 2 0 0 79 0 0 0 4 4 0 48 0 0 0.905 30 0.30
66 66 A 0 0 0 0 0 0 0 4 4 13 0 0 0 2 0 0 73 2 2 0 48 0 0 0.997 33 0.42
67 67 A 0 0 0 2 0 0 0 0 2 4 51 17 0 0 0 2 2 17 2 0 47 0 0 1.490 49 0.27
68 68 A 0 0 0 0 0 0 0 2 0 0 0 0 0 4 77 0 15 0 0 2 47 0 0 0.786 26 0.52
69 69 A 0 0 0 0 2 0 0 88 2 0 7 0 0 0 0 0 0 0 0 0 43 0 0 0.470 15 0.62
70 70 A 0 0 0 0 0 0 3 0 79 0 5 8 0 0 0 0 0 3 3 0 38 0 0 0.829 27 0.32
71 71 A 0 3 0 0 0 0 17 0 0 0 6 0 75 0 0 0 0 0 0 0 36 0 0 0.775 25 0.48
72 72 A 0 0 3 0 0 0 0 3 0 3 26 66 0 0 0 0 0 0 0 0 35 0 0 0.930 31 0.37
73 73 A 0 0 0 0 0 3 0 0 3 0 91 0 0 0 0 0 0 3 0 0 35 0 0 0.387 12 0.48
74 74 A 0 0 0 0 0 0 0 0 0 0 0 0 0 91 0 0 9 0 0 0 34 0 0 0.298 9 0.75
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 97 33 0 0 0.136 4 0.86
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
17 61 61 2 gSGs
19 61 61 2 gSGs
26 61 61 1 gAq
28 61 61 1 gAq
29 61 61 2 gSGs
30 61 61 2 gSHh
31 61 61 1 gPh
33 61 61 1 gPy
34 61 61 1 gPy
35 61 61 1 gPy
36 61 61 1 gGa
37 61 61 1 gPy
38 61 61 2 gDHh
41 26 26 1 rAr
42 60 60 2 rRAp
43 60 60 2 rRAp
47 52 52 1 eRi
//