Complet list of 1jmp hssp file
Complete list of 1jmp.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1JMP
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-02
HEADER TOXIN 19-JUL-01 1JMP
COMPND MOL_ID: 1; MOLECULE: VISCOTOXIN B; CHAIN: A; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: VISCUM ALBUM; ORGANISM_COMMON: EUROPEA
AUTHOR A.COULON,A.MOSBAH,C.BERNARD,P.ROUGE,K.URECH,H.DARBON
DBREF 1JMP A 1 46 UNP P08943 THNB_VISAL 7 52
SEQLENGTH 46
NCHAIN 1 chain(s) in 1JMP data set
NALIGN 152
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : THNB_VISAL 2V9B 1.00 1.00 1 46 7 52 46 0 0 103 P08943 Viscotoxin-B (Fragment) OS=Viscum album GN=THI2.2 PE=1 SV=2
2 : THNC_VISAL 1ORL 0.93 0.98 1 46 1 46 46 0 0 46 P83554 Viscotoxin-C1 OS=Viscum album PE=1 SV=1
3 : THN2_VISAL 1JMN 0.91 0.93 1 45 1 44 45 1 1 46 P32880 Viscotoxin-A2 OS=Viscum album GN=THI2.3 PE=1 SV=1
4 : D0VWT3_VISAL3C8P 0.87 0.93 1 46 1 46 46 0 0 46 D0VWT3 Viscotoxin A1 OS=Viscum album PE=1 SV=1
5 : THN3_VISAL 1OKH 0.83 0.91 1 46 27 72 46 0 0 111 P01538 Viscotoxin-A3 OS=Viscum album GN=THI2.1 PE=1 SV=2
6 : Q9S9A2_VISAL 0.80 0.89 1 46 27 72 46 0 0 111 Q9S9A2 Viscotoxin A OS=Viscum album PE=4 SV=1
7 : THN1_VISAL 0.76 0.91 1 46 1 46 46 0 0 46 P01537 Viscotoxin-1-PS OS=Viscum album GN=THI2.4 PE=1 SV=1
8 : THNA_PHOLI 0.76 0.89 1 45 1 45 45 0 0 46 P01540 Ligatoxin-A OS=Phoradendron liga PE=1 SV=1
9 : THNB_PHOLI 0.76 0.87 1 45 1 45 45 0 0 46 P59358 Ligatoxin-B OS=Phoradendron liga PE=1 SV=1
10 : R0F7R7_9BRAS 0.75 0.89 1 44 25 68 44 0 0 134 R0F7R7 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006002mg PE=4 SV=1
11 : C9W327_HORVD 0.74 0.85 1 46 29 74 46 0 0 137 C9W327 Lemma thionin OS=Hordeum vulgare var. distichum GN=LemThio1 PE=2 SV=1
12 : M0URZ0_HORVD 0.74 0.82 8 46 1 39 39 0 0 102 M0URZ0 Uncharacterized protein (Fragment) OS=Hordeum vulgare var. distichum PE=4 SV=1
13 : R0HUF3_9BRAS 0.73 0.89 1 37 25 61 37 0 0 133 R0HUF3 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021136mg PE=4 SV=1
14 : F2D5I9_HORVD 0.72 0.85 1 46 29 74 46 0 0 137 F2D5I9 Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1
15 : F2D7C5_HORVD 0.72 0.85 1 46 29 74 46 0 0 137 F2D7C5 Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1
16 : M0W1K5_HORVD 0.72 0.83 1 36 29 64 36 0 0 64 M0W1K5 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
17 : THN5_HORVU 0.72 0.85 1 46 29 74 46 0 0 137 P09617 Leaf-specific thionin OS=Hordeum vulgare GN=THI1.5 PE=2 SV=2
18 : THN7_HORVU 0.72 0.85 1 46 29 74 46 0 0 137 Q42838 Thionin BTH7 OS=Hordeum vulgare PE=2 SV=1
19 : R0F708_9BRAS 0.71 0.87 1 38 25 62 38 0 0 133 R0F708 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006008mg PE=4 SV=1
20 : R0I5Q0_9BRAS 0.71 0.87 1 38 25 62 38 0 0 133 R0I5Q0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014899mg PE=4 SV=1
21 : R0IA88_9BRAS 0.71 0.89 1 38 25 62 38 0 0 133 R0IA88 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021135mg PE=4 SV=1
22 : THN_PHOTO 0.71 0.82 1 45 1 45 45 0 0 46 P01539 Phoratoxin OS=Phoradendron tomentosum PE=1 SV=1
23 : F2D1X7_HORVD 0.70 0.80 1 46 29 74 46 0 0 137 F2D1X7 Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1
24 : M0WAI3_HORVD 0.70 0.80 1 46 29 74 46 0 0 94 M0WAI3 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
25 : M0WAI4_HORVD 0.70 0.80 1 46 29 74 46 0 0 85 M0WAI4 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
26 : R0G7T6_9BRAS 0.70 0.93 1 44 23 66 44 0 0 132 R0G7T6 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014903mg PE=4 SV=1
27 : THNX_HORVU 0.70 0.85 1 46 29 74 46 0 0 137 Q8H0Q5 Probable leaf thionin OS=Hordeum vulgare PE=2 SV=1
28 : K3YK38_SETIT 0.69 0.81 1 42 34 75 42 0 0 142 K3YK38 Uncharacterized protein OS=Setaria italica GN=Si014607m.g PE=4 SV=1
29 : K3YK47_SETIT 0.69 0.81 1 42 34 75 42 0 0 140 K3YK47 Uncharacterized protein OS=Setaria italica GN=Si014607m.g PE=4 SV=1
30 : A2YDI1_ORYSI 0.68 0.89 1 37 28 64 37 0 0 127 A2YDI1 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23171 PE=4 SV=1
31 : B7F9C4_ORYSJ 0.68 0.89 1 37 33 69 37 0 0 140 B7F9C4 cDNA, clone: J075167K24, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1
32 : B7F9T5_ORYSJ 0.68 0.89 1 37 28 64 37 0 0 135 B7F9T5 cDNA, clone: J090085H12, full insert sequence OS=Oryza sativa subsp. japonica PE=2 SV=1
33 : C7J3F9_ORYSJ 0.68 0.89 1 37 33 69 37 0 0 114 C7J3F9 Os06g0517300 protein OS=Oryza sativa subsp. japonica GN=Os06g0517300 PE=4 SV=1
34 : Q0DBX2_ORYSJ 0.68 0.89 1 37 28 64 37 0 0 109 Q0DBX2 Os06g0517700 protein OS=Oryza sativa subsp. japonica GN=Os06g0517700 PE=4 SV=2
35 : Q5Z540_ORYSJ 0.68 0.89 1 37 28 64 37 0 0 135 Q5Z540 Putative thionin Osthi1 OS=Oryza sativa subsp. japonica GN=OSJNBa0085C03.54 PE=4 SV=1
36 : Q5Z5V1_ORYSJ 0.68 0.89 1 37 28 64 37 0 0 135 Q5Z5V1 Putative thionin Osthi1 OS=Oryza sativa subsp. japonica GN=OSJNBa0020P04.23 PE=4 SV=1
37 : R0G868_9BRAS 0.68 0.89 1 44 23 66 44 0 0 132 R0G868 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014907mg PE=4 SV=1
38 : R0HES6_9BRAS 0.68 0.91 1 44 23 66 44 0 0 132 R0HES6 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024304mg PE=4 SV=1
39 : THN_PYRPU 0.68 0.77 1 46 1 47 47 1 1 47 P07504 Thionin OS=Pyrularia pubera GN=THI1 PE=1 SV=1
40 : K3YJV8_SETIT 0.67 0.86 1 42 65 106 42 0 0 173 K3YJV8 Uncharacterized protein OS=Setaria italica GN=Si014527m.g PE=4 SV=1
41 : K3YK37_SETIT 0.67 0.86 1 42 34 75 42 0 0 142 K3YK37 Uncharacterized protein OS=Setaria italica GN=Si014606m.g PE=4 SV=1
42 : K3YK39_SETIT 0.67 0.86 1 42 34 75 42 0 0 142 K3YK39 Uncharacterized protein OS=Setaria italica GN=Si014608m.g PE=4 SV=1
43 : K3YK46_SETIT 0.67 0.86 1 42 34 75 42 0 0 140 K3YK46 Uncharacterized protein OS=Setaria italica GN=Si014608m.g PE=4 SV=1
44 : Q002B9_9CARY 0.67 0.89 1 46 25 70 46 0 0 140 Q002B9 Putative thionin (Precursor) OS=Knorringia sibirica GN=THI PE=2 SV=1
45 : Q9S9A0_VISAL 0.67 0.83 1 46 27 72 46 0 0 114 Q9S9A0 Thionin OS=Viscum album PE=4 SV=1
46 : R0I1C8_9BRAS 0.67 0.83 1 46 23 68 46 0 0 132 R0I1C8 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10014906mg PE=4 SV=1
47 : A2YDH3_ORYSI 0.66 0.92 1 38 28 65 38 0 0 135 A2YDH3 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23164 PE=4 SV=1
48 : A2YDH5_ORYSI 0.66 0.92 1 38 28 65 38 0 0 135 A2YDH5 Thionin OS=Oryza sativa subsp. indica GN=OsI_23165 PE=2 SV=1
49 : B9FTI4_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 110 B9FTI4 Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21501 PE=4 SV=1
50 : B9FTI5_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 110 B9FTI5 Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_21502 PE=4 SV=1
51 : C7J3B8_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 104 C7J3B8 Os06g0515301 protein OS=Oryza sativa subsp. japonica GN=Os06g0515301 PE=4 SV=1
52 : Q5Z434_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 135 Q5Z434 Os06g0512700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0061G23.50 PE=2 SV=1
53 : Q5Z4K0_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 135 Q5Z4K0 Os06g0513781 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0022O06.36 PE=2 SV=1
54 : Q5Z4S4_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 135 Q5Z4S4 Os06g0514100 protein OS=Oryza sativa subsp. japonica GN=P0597A07.39 PE=2 SV=1
55 : Q8LSZ9_AVESA 0.66 0.82 1 38 29 66 38 0 0 136 Q8LSZ9 Thionin Asthi5 OS=Avena sativa GN=Asthi5 PE=2 SV=1
56 : Q8LT04_ORYSJ 0.66 0.92 1 38 28 65 38 0 0 135 Q8LT04 Os06g0514800 protein OS=Oryza sativa subsp. japonica GN=Osthi1 PE=2 SV=1
57 : I1Q2L0_ORYGL 0.65 0.89 1 37 28 64 37 0 0 150 I1Q2L0 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
58 : M0WAF4_HORVD 0.65 0.80 1 46 29 74 46 0 0 137 M0WAF4 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
59 : Q9S9D7_HORVU 0.65 0.80 1 46 29 74 46 0 0 137 Q9S9D7 Thionin OS=Hordeum vulgare PE=4 SV=1
60 : R0GYM0_9BRAS 0.65 0.81 1 43 107 149 43 0 0 215 R0GYM0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005712mg PE=4 SV=1
61 : THN6_HORVU 0.65 0.80 1 46 29 74 46 0 0 137 P09618 Leaf-specific thionin BTH6 OS=Hordeum vulgare PE=2 SV=3
62 : R0H6L0_9BRAS 0.64 0.79 1 46 25 71 47 1 1 135 R0H6L0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018220mg PE=4 SV=1
63 : THN_DENCL 0.64 0.82 1 44 1 44 44 0 0 46 P01541 Denclatoxin-B OS=Dendrophthora clavata PE=1 SV=1
64 : Q5Z551_ORYSJ 0.63 0.87 1 38 28 65 38 0 0 148 Q5Z551 Putative thionin Osthi1 OS=Oryza sativa subsp. japonica GN=OSJNBa0085C03.23 PE=4 SV=1
65 : Q5Z554_ORYSJ 0.63 0.84 1 38 28 65 38 0 0 112 Q5Z554 Putative thionin Osthi1 OS=Oryza sativa subsp. japonica GN=OSJNBa0085C03.20 PE=4 SV=1
66 : R0F343_9BRAS 0.63 0.87 1 46 25 69 46 1 1 77 R0F343 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006928mg PE=4 SV=1
67 : R0FRU0_9BRAS 0.63 0.87 1 46 25 70 46 0 0 134 R0FRU0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018222mg PE=4 SV=1
68 : R0H2A6_9BRAS 0.63 0.87 1 38 25 62 38 0 0 136 R0H2A6 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10005988mg PE=4 SV=1
69 : THN3_HORVU 0.63 0.80 1 46 29 74 46 0 0 137 P08772 Leaf-specific thionin DB4 OS=Hordeum vulgare GN=THI1.3 PE=2 SV=2
70 : A2YDG9_ORYSI 0.62 0.89 1 37 28 64 37 0 0 135 A2YDG9 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23158 PE=4 SV=1
71 : B8B341_ORYSI 0.62 0.84 1 37 28 64 37 0 0 127 B8B341 Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_23169 PE=4 SV=1
72 : I1Q2K9_ORYGL 0.62 0.89 1 37 28 64 37 0 0 135 I1Q2K9 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
73 : Q5Z4W6_ORYSJ 0.62 0.89 1 37 28 64 37 0 0 135 Q5Z4W6 Putative thionin Osthi1 OS=Oryza sativa subsp. japonica GN=OSJNBb0071G09.18 PE=4 SV=1
74 : Q9S975_CRAAB 0.62 0.78 1 45 21 65 45 0 0 130 Q9S975 Crambin=THIONIN variant THI2CA11 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
75 : Q9S976_CRAAB 0.62 0.73 1 45 25 69 45 0 0 134 Q9S976 Crambin=THIONIN variant THI2CA10 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
76 : R0H0H7_9BRAS 0.62 0.81 1 42 25 66 42 0 0 133 R0H0H7 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006551mg PE=4 SV=1
77 : D2CVR6_BRANA 0.61 0.80 1 46 25 70 46 0 0 134 D2CVR6 Thionin OS=Brassica napus PE=2 SV=1
78 : I1H3P6_BRADI 0.61 0.76 1 46 29 74 46 0 0 138 I1H3P6 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57302 PE=4 SV=1
79 : M4C9D6_BRARP 0.61 0.80 1 46 25 70 46 0 0 134 M4C9D6 Thionin OS=Brassica rapa subsp. pekinensis GN=THI2 PE=4 SV=1
80 : THN_BRARP 0.61 0.80 1 46 25 70 46 0 0 133 Q9SBK8 Thionin OS=Brassica rapa subsp. pekinensis GN=THI2 PE=2 SV=1
81 : I1H3Q0_BRADI 0.60 0.76 1 45 29 73 45 0 0 139 I1H3Q0 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57337 PE=4 SV=1
82 : M0VF48_HORVD 0.60 0.70 1 43 9 51 43 0 0 60 M0VF48 Uncharacterized protein (Fragment) OS=Hordeum vulgare var. distichum PE=4 SV=1
83 : R0GLD4_9BRAS 0.60 0.77 2 44 26 68 43 0 0 109 R0GLD4 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006071mg PE=4 SV=1
84 : Q38L62_SALMI 0.59 0.78 1 46 19 63 46 1 1 121 Q38L62 Thionin OS=Salvia miltiorrhiza PE=2 SV=1
85 : Q43225_TULGE 0.59 0.76 1 46 19 64 46 0 0 114 Q43225 Thionin class 1 (Precursor) OS=Tulipa gesneriana GN=Thi1-2 PE=4 SV=1
86 : Q43226_TULGE 0.59 0.76 1 46 19 64 46 0 0 107 Q43226 Thionin class 1 (Precursor) OS=Tulipa gesneriana GN=Thi1-3 PE=4 SV=1
87 : Q43227_TULGE 0.59 0.80 1 46 13 58 46 0 0 112 Q43227 Thionin class 1 (Precursor) OS=Tulipa gesneriana GN=Thi1-4 PE=2 SV=1
88 : Q8LT02_AVESA 0.59 0.74 1 46 29 74 46 0 0 137 Q8LT02 Leaf thionin Asthi2 OS=Avena sativa GN=Asthi2 PE=2 SV=1
89 : R0F705_9BRAS 0.59 0.80 1 46 25 70 46 0 0 134 R0F705 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006003mg PE=4 SV=1
90 : R0HVZ8_9BRAS 0.59 0.84 1 44 25 68 44 0 0 134 R0HVZ8 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10016370mg PE=4 SV=1
91 : I1H3P1_BRADI 0.57 0.72 1 46 29 74 46 0 0 135 I1H3P1 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57280 PE=4 SV=1
92 : I1H3P2_BRADI 0.57 0.72 1 46 29 74 46 0 0 135 I1H3P2 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57285 PE=4 SV=1
93 : I1H3P5_BRADI 0.57 0.72 1 46 29 74 46 0 0 135 I1H3P5 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57296 PE=4 SV=1
94 : I1H3Q6_BRADI 0.57 0.74 1 46 29 74 46 0 0 139 I1H3Q6 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI1G57400 PE=4 SV=1
95 : Q8LT00_AVESA 0.57 0.76 1 46 29 74 46 0 0 142 Q8LT00 Thionin Asthi4 OS=Avena sativa GN=Asthi4 PE=2 SV=1
96 : I1H3P4_BRADI 0.56 0.71 1 45 55 99 45 0 0 127 I1H3P4 Uncharacterized protein (Fragment) OS=Brachypodium distachyon GN=BRADI1G57290 PE=4 SV=1
97 : M0VGX5_HORVD 0.56 0.67 1 43 28 70 43 0 0 119 M0VGX5 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
98 : M0ZEV0_HORVD 0.56 0.66 1 41 14 54 41 0 0 57 M0ZEV0 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
99 : Q9S980_CRAAB 0.55 0.73 1 44 25 68 44 0 0 133 Q9S980 Crambin=THIONIN variant THI2CA3 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
100 : C5WS97_SORBI 0.54 0.78 1 37 29 65 37 0 0 140 C5WS97 Putative uncharacterized protein Sb01g014470 OS=Sorghum bicolor GN=Sb01g014470 PE=4 SV=1
101 : I1H3P3_BRADI 0.54 0.70 1 46 55 100 46 0 0 161 I1H3P3 Uncharacterized protein (Fragment) OS=Brachypodium distachyon GN=BRADI1G57290 PE=4 SV=1
102 : Q8LT03_AVESA 0.54 0.70 1 46 29 74 46 0 0 137 Q8LT03 Leaf thionin Asthi1 OS=Avena sativa GN=Asthi1 PE=2 SV=1
103 : R0FHE8_9BRAS 0.54 0.85 1 46 25 70 46 0 0 136 R0FHE8 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10002233mg PE=4 SV=1
104 : R0GP19_9BRAS 0.54 0.74 1 46 25 70 46 0 0 134 R0GP19 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10012371mg PE=4 SV=1
105 : R0GWY4_9BRAS 0.54 0.78 1 46 25 70 46 0 0 134 R0GWY4 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006000mg PE=4 SV=1
106 : Q9S974_CRAAB 0.51 0.71 1 45 26 70 45 0 0 135 Q9S974 Crambin=THIONIN variant THI2CA12 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
107 : THND_HELPU 3SZS 0.51 0.73 1 45 1 45 45 0 0 46 P60057 Hellethionin-D OS=Helleborus purpurascens PE=1 SV=1
108 : B8YLY8_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YLY8 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
109 : B8YLY9_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YLY9 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
110 : B8YLZ1_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YLZ1 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
111 : B8YM01_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YM01 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
112 : B8YM03_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YM03 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
113 : B8YM04_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YM04 Beta purothionin OS=Triticum monococcum subsp. monococcum PE=4 SV=1
114 : B8YM05_TRIMO 0.50 0.67 1 46 28 72 46 1 1 136 B8YM05 Beta purothionin OS=Triticum monococcum subsp. monococcum PE=4 SV=1
115 : B8YM08_TRIMO 0.50 0.67 1 46 28 72 46 1 1 136 B8YM08 Beta purothionin OS=Triticum monococcum subsp. monococcum PE=4 SV=1
116 : B8YM12_TRIMO 0.50 0.70 1 46 28 72 46 1 1 136 B8YM12 Beta purothionin OS=Triticum monococcum subsp. monococcum PE=4 SV=1
117 : B8YM14_TRIUA 0.50 0.70 1 46 28 72 46 1 1 136 B8YM14 Beta purothionin OS=Triticum urartu PE=4 SV=1
118 : B8YM15_TRIUA 0.50 0.70 1 46 28 72 46 1 1 136 B8YM15 Beta purothionin OS=Triticum urartu PE=4 SV=1
119 : B8YM17_TRIUA 0.50 0.70 1 46 28 72 46 1 1 137 B8YM17 Beta purothionin OS=Triticum urartu PE=4 SV=1
120 : F2EE63_HORVD 0.50 0.70 1 46 28 72 46 1 1 136 F2EE63 Predicted protein OS=Hordeum vulgare var. distichum PE=2 SV=1
121 : J7K291_WHEAT 0.50 0.70 1 46 2 46 46 1 1 111 J7K291 Alpha purothionin (Fragment) OS=Triticum aestivum PE=2 SV=1
122 : M8A8G4_TRIUA 0.50 0.70 1 46 28 72 46 1 1 136 M8A8G4 Purothionin A-1 OS=Triticum urartu GN=TRIUR3_17356 PE=4 SV=1
123 : Q9S979_CRAAB 0.50 0.78 1 46 7 52 46 0 0 118 Q9S979 Crambin=THIONIN variant THI2CA5 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
124 : Q9T0P1_WHEAT 0.50 0.70 1 46 28 72 46 1 1 137 Q9T0P1 Alpha purothionin (Precursor) OS=Triticum aestivum GN=Pur-B1 PE=4 SV=1
125 : Q9T0P2_WHEAT 0.50 0.70 1 46 28 72 46 1 1 136 Q9T0P2 Beta purothionin (Precursor) OS=Triticum aestivum GN=Pur-A1 PE=4 SV=1
126 : Q9ZNY5_SECCE 0.50 0.74 1 46 28 72 46 1 1 136 Q9ZNY5 Purothionin (Precursor) OS=Secale cereale GN=Pur-RL PE=4 SV=1
127 : THN1_WHEAT 2PLH 0.50 0.70 1 46 17 61 46 1 1 126 P01544 Alpha-1-purothionin (Fragment) OS=Triticum aestivum GN=THI1.1 PE=1 SV=2
128 : THNB_HORVU 1WUW 0.50 0.67 1 46 28 72 46 1 1 136 P21742 Beta-hordothionin OS=Hordeum vulgare GN=THI1.2 PE=1 SV=2
129 : THNB_WHEAT 1BHP 0.50 0.70 1 46 28 72 46 1 1 136 P01543 Purothionin A-1 OS=Triticum aestivum GN=THI1.3 PE=1 SV=2
130 : Q41609_TULGE 0.49 0.73 1 44 19 63 45 1 1 124 Q41609 Thionin class 4 (Precursor) OS=Tulipa gesneriana GN=Thi4-1 PE=2 SV=1
131 : Q9S977_CRAAB 0.49 0.69 1 45 26 70 45 0 0 135 Q9S977 Crambin=THIONIN variant THI2CA9 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
132 : B8YLZ3_TRIMO 0.48 0.70 1 46 28 72 46 1 1 136 B8YLZ3 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
133 : B8YLZ6_TRIMO 0.48 0.67 1 46 28 72 46 1 1 136 B8YLZ6 Beta purothionin OS=Triticum monococcum subsp. aegilopoides PE=4 SV=1
134 : B8YM20_TRIUA 0.48 0.67 1 46 28 72 46 1 1 136 B8YM20 Beta purothionin OS=Triticum urartu PE=4 SV=1
135 : B8YM21_TRIUA 0.48 0.70 1 46 28 72 46 1 1 136 B8YM21 Beta purothionin OS=Triticum urartu PE=4 SV=1
136 : D7MI46_ARALL 0.48 0.67 1 46 26 70 46 1 1 134 D7MI46 Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_659206 PE=4 SV=1
137 : M0VC70_HORVD 0.48 0.74 1 46 25 69 46 1 1 133 M0VC70 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
138 : Q43224_TULGE 0.48 0.65 1 46 19 64 46 0 0 121 Q43224 Thionin class 1 (Precursor) OS=Tulipa gesneriana GN=Thi1-1 PE=2 SV=1
139 : THNA_HORVU 0.48 0.74 1 46 19 63 46 1 1 127 P01545 Alpha-hordothionin OS=Hordeum vulgare GN=THI1.1 PE=1 SV=1
140 : M7YXV1_TRIUA 0.46 0.61 1 46 32 76 46 1 1 140 M7YXV1 Putative leaf thionin OS=Triticum urartu GN=TRIUR3_00975 PE=4 SV=1
141 : N1QPV1_AEGTA 0.46 0.67 1 46 64 108 46 1 1 172 N1QPV1 Alpha-2-purothionin OS=Aegilops tauschii GN=F775_31110 PE=4 SV=1
142 : Q43205_WHEAT 0.46 0.67 1 46 28 72 46 1 1 136 Q43205 Alpha-1 purothionin OS=Triticum aestivum PE=4 SV=1
143 : Q53WS1_WHEAT 0.46 0.67 1 46 28 72 46 1 1 136 Q53WS1 Alpha 1 purothionin (Precursor) OS=Triticum aestivum GN=Pur-D1 PE=2 SV=1
144 : Q9S981_CRAAB 0.46 0.63 1 46 25 70 46 0 0 134 Q9S981 Crambin=THIONIN variant THI2CA2 (Precursor) OS=Crambe hispanica subsp. abyssinica PE=4 SV=1
145 : THN2_WHEAT 0.46 0.67 1 46 28 72 46 1 1 136 P32032 Alpha-2-purothionin OS=Triticum aestivum GN=THI1.2 PE=2 SV=1
146 : A1Z1S5_BRAJU 0.44 0.62 1 45 16 59 45 1 1 127 A1Z1S5 Thionin (Fragment) OS=Brassica juncea PE=2 SV=1
147 : CRAM_CRAAB 1YV8 0.44 0.76 2 46 2 46 45 0 0 46 P01542 Crambin OS=Crambe hispanica subsp. abyssinica GN=THI2 PE=1 SV=2
148 : M0W8Y0_HORVD 0.44 0.66 1 41 18 58 41 0 0 87 M0W8Y0 Uncharacterized protein OS=Hordeum vulgare var. distichum PE=4 SV=1
149 : Q9S9A1_VISAL 0.44 0.60 1 45 26 69 45 1 1 115 Q9S9A1 Thionin OS=Viscum album PE=4 SV=1
150 : Q8LT01_AVESA 0.41 0.63 1 46 29 74 46 0 0 137 Q8LT01 Leaf thionin Asthi3 OS=Avena sativa GN=Asthi3 PE=2 SV=1
151 : T1MWT7_TRIUA 0.41 0.63 1 46 27 72 46 0 0 135 T1MWT7 Uncharacterized protein (Fragment) OS=Triticum urartu PE=4 SV=1
152 : THN24_ARATH 0.41 0.63 1 46 25 70 46 0 0 134 Q9C8D6 Probable thionin-2.4 OS=Arabidopsis thaliana GN=At1g66100 PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A K 0 0 107 150 4 KKKKKKKKKKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
2 2 A S - 0 0 2 152 16 SSSSSSSSSSS SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
3 3 A a B -A 33 0A 0 152 0 CCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
4 4 A b - 0 0 3 152 2 CCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
5 5 A P S S+ 0 0 67 152 58 PPPPPPPPPPK PKKKKKPPPPKKKPKPPPPPPPPPPPRPPPPQRPPPPPPPPPPPPKKPKPPPPPPPKP
6 6 A N S >> S- 0 0 96 152 57 NNNSNNBSSNN SNNNNNTSNTTTTSNSSTTTTTTTSSNSSSSTNTSSSSSSSSSSSDDNDNTSSTNTDS
7 7 A T H 3> S+ 0 0 63 152 27 TTTTTTTTTTT TTTTTTSTSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTRTTTSTTTT
8 8 A T H 3> S+ 0 0 95 153 73 TTTTTTTTTTTTSTTTTTTNTTFFFTTTTTTTTTTTTTWTTTTTTTTTTTTTTTSTILLTLTASSTTTLT
9 9 A G H X> S+ 0 0 9 153 38 GGGGGGGAAAGGAGGGGGAAAAAAAAGAAAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAAAAAVAAAAA
10 10 A R H 3X S+ 0 0 31 153 3 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
11 11 A N H 3X S+ 0 0 91 153 23 NNNNNNBNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
12 12 A I H < S+ 0 0 22 153 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A R H >< S+ 0 0 134 153 13 RRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHR
18 18 A L H 3< S+ 0 0 156 153 69 LFFLLLFLLLFFFFFFFFVLVFFFFFFIIFFFFFFFFFLLLLLLVLFFFFFFFFLFFFFLFLLFFVFLFF
19 19 A G T << S- 0 0 66 153 82 GAGTTTGTTPAGTAAAAAVMVGAAAGATTAAAAAAAAAPTTTTAPTAAAAAAAATAAAAPAGPAAVPAAT
20 20 A G S < S+ 0 0 74 153 25 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGHLHLHLHGGgGGGGGGGGGGGGGGGGGGGGGGpGGGGGGGG
21 21 A G - 0 0 8 118 56 GGGSAAGTATGGGGGGGGGTGGGGGGGTTGGGGGGGTSiAAAAGTSGGGGGGGGTGGGGTGpTGGGALGA
22 22 A S > - 0 0 78 153 55 SSSSPPSSSPSSSSSSSSSSSSSSSSSSSTTTTTTTPPSSSSSSPPSSSSSSSSSSSSSPSSPSSSPSSS
23 23 A R H > S+ 0 0 105 153 56 RRRRRCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRPRRRRRRRR
24 24 A E H > S+ 0 0 158 153 73 EEEEPPZPSPPPPPPPPPPPPPPPPPPPPEEEEEEEPPEPPPPEPPDDNDDDDNPDDPPPPAPEEPPAPD
25 25 A R H > S+ 0 0 169 153 79 RRVTTTVTVTVVFVVVVVSITVVVVVVTTRRRRRRRVVITTMMRVVTTTTTTTTRTTVVTVVVAATVVVK
26 26 A c H X S+ 0 0 0 153 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A A H < S+ 0 0 24 153 27 AAAAAAAAAAAAAAAAAAAAAAAAASAAASSSSSSSAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAC
28 28 A S H < S+ 0 0 114 153 72 SKSKKKRSSSTSSTTTTTGSGKGGGGTKKKKKKKKKSSKKKKKSSSKKKKKKKKSKKGGSGRAKKGSNGK
29 29 A L H < S+ 0 0 110 153 66 LLLLLLILLLAALAAAAALLLLAAALALLLLLLLLLLLKLLLLLLLLLLLLLLLLLLAALALLLLLLRAI
30 30 A S S < S- 0 0 46 153 34 SSSSSSSSSSCCSCCCCCSSSSCCCSCSSSSSSSSSSSCSSSSSCSSSSSSSSSCSSCCCCSSSSSCSCS
31 31 A G + 0 0 54 153 62 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGDGGGGGGGGGGGGRRGRGGTTGGGRG
32 32 A b - 0 0 8 153 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A K B -A 3 0A 106 152 36 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQQQQKKIKKKKKKKKKKKKKKKKKKKKQRKK
34 34 A I - 0 0 63 153 42 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIINNIIIIIHINIIIIIIIIIIIIIIIIIHHIILII
35 35 A I - 0 0 38 153 51 IIIIIIIIIIIIVIIIIIVVVIIIIIIIIVVVVVVVIIIIIIIVIIVVVVVVVVVVVIIVIIIFFVVVIV
36 36 A S S S+ 0 0 88 152 52 SSSSSSSSSSSSDSSSSSDNDSSSSGSSSDDDDDDDSSSSSSSTSSDDDDDDDDDDDSSESNSDD.GNSD
37 37 A A S S- 0 0 96 152 32 AAAAGGAGGSGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGG
38 38 A S S S+ 0 0 78 137 87 SSSSSSSSSGPP PP PPSSSTSSSTPDD TTTNNNNNSTNNNNNNNNTN PPPPSTSSGSSP
39 39 A T - 0 0 95 122 69 TTTTTTTTTRTT TT TT KKKKKTKK KKTKKKKTKK KKTKTG ST K
40 40 A a - 0 0 32 122 7 CCCCCCCCCCCC CC CC CCCCCCCC CCCCCCCCCC CCCCCC CC C
41 41 A P S S- 0 0 48 122 14 PPPPPPPBDPPP PP PP DPPPPPKK PPPKKKKSPP PPPPPP PP P
42 42 A S S S- 0 0 106 119 73 SS.SSSSSSNRR RR RR SSSSNRPP NNSPPPPPAN SSPSNP NS S
43 43 A D S S+ 0 0 143 113 39 DDSNDDYGGGDD DD DD GDDDGD GGD GDG DDGDGG GG D
44 44 A Y + 0 0 69 110 17 YYYYYYPWWYYY YY YY WYYYYY YYY WYY YY YYY YY Y
45 45 A P 0 0 45 101 32 PPPPPPBBN PP PP PP NPPP P P EPP PP PT PT P
46 46 A K 0 0 128 88 40 KK KKKK KK KK KK KKK K K KRH KK KN NQ K
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A K 0 0 107 150 4 KKKKKKKKKKKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKKKKKKKKKKKKK
2 2 A S - 0 0 2 152 16 SSSSSSISIISSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSISSSSSSSSSSSSLSSSS
3 3 A a B -A 33 0A 0 152 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
4 4 A b - 0 0 3 152 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCFYCCCCCCCCC
5 5 A P S S+ 0 0 67 152 58 PPPPPPPKPPKCPPRRPKPPKKKKKKCCPPKKPPPPRKKKKKKKKKKKKRRKPRKKRRKPPKKKKPRRRR
6 6 A N S >> S- 0 0 96 152 57 SSSSSSRTRRTSDSNNSDNSNNNTSNSSTSNDSNNTNSSSSSSSSSSSSSSSNSSSSSSSTSSSSNSTSD
7 7 A T H 3> S+ 0 0 63 152 27 TTTIITTTTTTTKTTTTTTSTTTTTTTTMRTIITTKTTTTTTTTTTTTTTTTTTTTTTTTKTITTQTTTT
8 8 A T H 3> S+ 0 0 95 153 73 ITTTTTIIIIMTTTTTATTTSSSTTSTTAISMTAFSLLLLLLLLLLLLLLLLTLLLLLLASLLLLTLALR
9 9 A G H X> S+ 0 0 9 153 38 AAAAAADADDATSAAAAAGASSSAASTTAASASPAAAGGGGGGGGGGGGGGGAGGGGGGAAGGGGAGAGS
10 10 A R H 3X S+ 0 0 31 153 3 RRRRRRRRRRRRRRRRRRRRRRRRIRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRRR
11 11 A N H 3X S+ 0 0 91 153 23 NNNNNNNNNNNNNNNNNNNNLFLNNLNNINLNNNNNNNNNNNNNNNNNNNNNSNNNNNNYNNNNDSNNNN
12 12 A I H < S+ 0 0 22 153 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A R H >< S+ 0 0 134 153 13 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRCRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRIRRRL
18 18 A L H 3< S+ 0 0 156 153 69 FFFLLALALLFVLLLLFILFKKKFLKVVAFKIIIFLFAAAAAAAAAAAAVAALAATAVALLAAAARVLVL
19 19 A G T << S- 0 0 66 153 82 VTTPPGTATTGTIRPPPPTGALLTAATTLRAPVPFTTRRRRRRRRRRRRRRRPRRRRRRPTRRRRRRGRV
20 20 A G S < S+ 0 0 74 153 25 GGGGGGGGGGGGGLGGGGGGGGGGGGGGGGGGGGKGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGPGGGH
21 21 A G - 0 0 8 118 56 GAATTGAGAAGST.TTTTAVGGGAAGSSTAGTFTFTG...............T......rT......T..
22 22 A S > - 0 0 78 153 55 SSSPPSSASSASYPPPPPPPSTTSPSTSPSSPPAPSSAAAAAAAAAAAAAAAAAAAAAAPSAAAASAPAP
23 23 A R H > S+ 0 0 105 153 56 RRRRRRMRMMRRTARRRRRSQRRRRQRRRRQRIKRMQQQQQQQQQQQQQQQQEQQQQQQEMQQQQPQQQS
24 24 A E H > S+ 0 0 158 153 73 DDDPPPTQTTPPESPPPPPSGPLLPGPPPEGPGGEGPKKKKKKKKKKKKKKKPKKKKKKTGKKKKEKTKT
25 25 A R H > S+ 0 0 169 153 79 TKKVVTNVNNVTASVVVVIIAEEAVATTVTAVKTDLTLLLLLLLLLLLLLLLILLLLLLILLLLLHLLLP
26 26 A c H X S+ 0 0 0 153 0 SCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A A H < S+ 0 0 24 153 27 ACCAATAAAAAAAAAAAAAVAAAAAAAAAAAAAARAGAAAAAAAAAAAAAAAAAAAAAAAAPAAALAAAS
28 28 A S H < S+ 0 0 114 153 72 KKKSTSNSNNRSKDAAATNGSSSNGSSSARSTKIKAINNNNNNNNNNNNNGNTGNNGNNAANNNNAGRGK
29 29 A L H < S+ 0 0 110 153 66 LIIILVLTLLSLALTTTTGLTRRIPTLLLFTTLLNILVVVVVVVVVVVVAVVDVVFVAVRIVVVVLVTVM
30 30 A S S < S- 0 0 46 153 34 SSSSSSSCSSCCCSCCCCCSCCCCCCCCSACCSCSSCCCCCCCCCCCCCCCCTCCCCCCCSCCCCSCCCC
31 31 A G + 0 0 54 153 62 GGGGGGGGGGGGGGDDGRGGGGGGGGGGGRGRGGGEDRRRRRRRRRRRRRRRGRRRRRRGERRRRTRDRG
32 32 A b - 0 0 8 153 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A K B -A 3 0A 106 152 36 KKKKIKKKKKKKKKKKKKKLIIITKIKTKEIKKKTKIKKKKKKKKKKKKKKKIKKKKKKKKKKKKKKIKV
34 34 A I - 0 0 63 153 42 IIIIIIIIIIIIIVIIIIILHHHILHIIIIHIILFIHLLLLLLLLLLLLLILIILLILLIILLLLILHLL
35 35 A I - 0 0 38 153 51 VVVLQVVIVVILVIIIIIVIIIITLILLLVIIIIVLVTTTTTTTTTTTTTSTISTISTTILTTTTITITT
36 36 A S S S+ 0 0 88 152 52 DDDSSDSSSSKEGDSSTSNGDSSSDDEEDQDSTETSTSSSSSSSSSSSSSSSPSSSSSSSSSSRSSSTSR
37 37 A A S S- 0 0 96 152 32 GGGVDKGGGGGKGGSSGGSGGGGGVGKKVGGGGGSVTGGGGGGGGGGGGGGGGGGSGGGSVGGGGGSTSD
38 38 A S S S+ 0 0 78 137 87 TSTTNTTSCSGGGTNGSKNNTTKCCT KNTTGTTLXVLLLLLLLLLLLLALLTLLLGTLLLLNGGGS
39 39 A T - 0 0 95 122 69 KTCTKTTTVTTKKKKSKRRKTTRVVK RKTTTKTSSSSSSSGSSSSKSSTSSSSKSNKSSSSIKNKT
40 40 A a - 0 0 32 122 7 CCPCCCCCPCCCCCCCCCCCCCCPPC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
41 41 A P S S- 0 0 48 122 14 PKPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
42 42 A S S S- 0 0 106 119 73 SPGPSPPNSSTPPPKNNAAANSAC P AKNPDSSKKKKKKKKKKKKSKKGKKKKSKPSKKKKPTRTR
43 43 A D S S+ 0 0 143 113 39 NP GSGGGDGGGGDDGGDDDDDDD D DDGGGNSDDDDDDDDDDDDGGDDGDEGSDGNDDDDGGSGE
44 44 A Y + 0 0 69 110 17 LY YFYYF YWYYYYYYYYYLWY Y YYYYFLHFFFFFFLFFFFFFFFYFFFFFFYLFFFFYFHFY
45 45 A P 0 0 45 101 32 PP TPTTP TEEPPT PPPRPP PPSTPPPPPPPPPPPPPPPPPPAPPPPPP PPPPPTPPPP
46 46 A K 0 0 128 88 40 HKHH NKKKKH KSSKK SKKHR KKKKKKKKKKKKKKKNKKKKKK KKKKNKKKK
## ALIGNMENTS 141 - 152
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A K 0 0 107 150 4 KKKKKK RKNKN
2 2 A S - 0 0 2 152 16 SSSSSSTVITSI
3 3 A a B -A 33 0A 0 152 0 CCCCCCCCCCCC
4 4 A b - 0 0 3 152 2 CCCCCCCCCCCC
5 5 A P S S+ 0 0 67 152 58 RRRPRPPCRKRP
6 6 A N S >> S- 0 0 96 152 57 TTTTTSSSADDS
7 7 A T H 3> S+ 0 0 63 152 27 TTTPTTIIPDTI
8 8 A T H 3> S+ 0 0 95 153 73 LLLILAVEAIRQ
9 9 A G H X> S+ 0 0 9 153 38 GGGAGAAGGASA
10 10 A R H 3X S+ 0 0 31 153 3 RRRRRRRRKRRR
11 11 A N H 3X S+ 0 0 91 153 23 NNNKNWSNKNNT
12 12 A I H < S+ 0 0 22 153 1 CCCCCCCCCCGC
17 17 A R H >< S+ 0 0 134 153 13 RRRRRTRRTRRL
18 18 A L H 3< S+ 0 0 156 153 69 SSSLSNLIAITF
19 19 A G T << S- 0 0 66 153 82 RRRTRSPDLPQA
20 20 A G S < S+ 0 0 74 153 25 GGGGGWGGLGDV
21 21 A G - 0 0 8 118 56 ...S.PTD.TKG
22 22 A S > - 0 0 78 153 55 AAATALPSSPNS
23 23 A R H > S+ 0 0 105 153 56 QQQIQTERSTCP
24 24 A E H > S+ 0 0 158 153 73 KKKAKPAEEFSS
25 25 A R H > S+ 0 0 169 153 79 LLLSLLLTTISS
26 26 A c H X S+ 0 0 0 153 0 CCCCCCCCCCCC
27 27 A A H < S+ 0 0 24 153 27 SSSISIAAAASI
28 28 A S H < S+ 0 0 114 153 72 TTTKTSTGNNKR
29 29 A L H < S+ 0 0 110 153 66 VVVYVHYTTMMN
30 30 A S S < S- 0 0 46 153 34 CCCSCTTCCCCS
31 31 A G + 0 0 54 153 62 RRRGRGGAYRGS
32 32 A b - 0 0 8 153 0 CCCCCCCCCCCC
33 33 A K B -A 3 0A 106 152 36 KKKIK.IKKIVL
34 34 A I - 0 0 63 153 42 LLLTLIIFDILD
35 35 A I - 0 0 38 153 51 TTTITEILVTTI
36 36 A S S S+ 0 0 88 152 52 SSSSSSPDSRRS
37 37 A A S S- 0 0 96 152 32 GGGGGEGKGRDE
38 38 A S S S+ 0 0 78 137 87 LLLTLTACENPS
39 39 A T - 0 0 95 122 69 SSSQSTTITETT
40 40 A a - 0 0 32 122 7 CCCCCCCSCCCC
41 41 A P S S- 0 0 48 122 14 PPPPPPPPPPPP
42 42 A S S S- 0 0 106 119 73 KKKNKPG ANSR
43 43 A D S S+ 0 0 143 113 39 GGGGGGD DDEG
44 44 A Y + 0 0 69 110 17 FFFYFYY YYYY
45 45 A P 0 0 45 101 32 PPPPPPA PPPT
46 46 A K 0 0 128 88 40 KKKHK N KNN
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 97 0 0 2 0 150 0 0 0.138 4 0.95
2 2 A 1 1 4 0 0 0 0 0 0 0 93 1 0 0 0 0 0 0 0 0 152 0 0 0.314 10 0.84
3 3 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 152 0 0 0.000 0 1.00
4 4 A 0 0 0 0 1 0 1 0 0 0 0 0 99 0 0 0 0 0 0 0 152 0 0 0.079 2 0.98
5 5 A 0 0 0 0 0 0 0 0 0 53 0 0 3 0 13 30 1 0 0 0 152 0 0 1.093 36 0.41
6 6 A 0 0 0 0 0 0 0 0 1 0 49 19 0 0 2 0 0 0 22 7 152 0 0 1.286 42 0.42
7 7 A 0 0 5 1 0 0 0 0 0 1 3 86 0 0 1 2 1 0 0 1 152 0 0 0.675 22 0.73
8 8 A 1 24 6 1 3 1 0 0 5 0 7 50 0 0 1 0 1 1 1 0 153 0 0 1.571 52 0.26
9 9 A 1 0 0 0 0 0 0 33 56 1 6 2 0 0 0 0 0 0 0 2 153 0 0 1.079 36 0.62
10 10 A 0 0 1 0 0 0 0 0 0 0 0 0 0 0 98 1 0 0 0 0 153 0 0 0.109 3 0.97
11 11 A 0 3 1 0 1 1 1 0 0 0 2 1 0 0 0 1 0 0 90 1 153 0 0 0.525 17 0.77
12 12 A 14 0 25 1 1 0 0 0 1 0 0 3 52 0 0 1 1 0 1 0 153 0 0 1.343 44 0.38
13 13 A 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 153 0 0 0.121 4 1.00
14 14 A 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 95 1 153 0 0 0.233 7 0.91
15 15 A 18 23 1 0 0 0 0 1 20 0 12 24 0 0 1 0 1 0 0 0 153 0 0 1.722 57 0.22
16 16 A 0 0 0 0 0 0 0 1 0 0 0 0 99 0 0 0 0 0 0 0 153 0 0 0.039 1 0.98
17 17 A 0 1 1 0 0 0 0 0 0 0 0 1 1 1 95 0 0 0 0 0 153 0 0 0.287 9 0.87
18 18 A 7 26 5 0 36 0 0 0 17 0 3 1 0 0 1 3 0 0 1 0 153 0 0 1.693 56 0.30
19 19 A 4 3 1 1 1 0 0 8 29 12 1 19 0 0 22 0 1 0 0 1 153 0 0 1.879 62 0.18
20 20 A 1 3 0 0 0 1 0 90 0 1 0 0 0 3 0 1 0 0 0 1 153 35 3 0.511 17 0.75
21 21 A 1 1 1 0 2 0 0 48 15 2 6 22 0 0 1 1 0 0 0 1 118 0 0 1.520 50 0.43
22 22 A 0 1 0 0 0 0 1 0 23 19 49 7 0 0 0 0 0 0 1 0 153 0 0 1.290 43 0.44
23 23 A 0 0 1 3 0 0 0 0 1 2 2 2 1 0 61 1 24 2 0 0 153 0 0 1.239 41 0.43
24 24 A 0 1 0 0 1 0 0 5 3 39 3 4 0 0 0 20 1 14 1 8 153 0 0 1.824 60 0.26
25 25 A 25 24 5 1 1 0 0 0 5 1 3 21 0 1 8 3 0 1 2 1 153 0 0 2.027 67 0.21
26 26 A 0 0 0 0 0 0 0 0 0 0 1 0 99 0 0 0 0 0 0 0 153 0 0 0.039 1 0.99
27 27 A 1 1 2 0 0 0 0 1 83 1 9 1 2 0 1 0 0 0 0 0 153 0 0 0.725 24 0.73
28 28 A 0 0 1 0 0 0 0 12 6 0 19 10 0 0 4 27 0 0 20 1 153 0 0 1.866 62 0.28
29 29 A 19 44 5 2 1 0 1 1 12 1 1 8 0 1 3 1 0 0 1 1 153 0 0 1.822 60 0.34
30 30 A 0 0 0 0 0 0 0 0 1 0 46 2 52 0 0 0 0 0 0 0 153 0 0 0.809 27 0.66
31 31 A 0 0 0 0 0 0 1 65 1 0 1 2 0 0 25 0 0 1 0 4 153 0 0 0.986 32 0.37
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 153 1 0 0.000 0 1.00
33 33 A 1 1 9 0 0 0 0 0 0 0 0 2 0 0 1 82 3 1 0 0 152 0 0 0.741 24 0.64
34 34 A 1 22 65 0 1 0 0 0 0 0 0 1 0 7 0 0 0 0 2 1 153 0 0 1.047 34 0.57
35 35 A 27 6 42 0 1 0 0 0 0 0 2 20 0 0 0 0 1 1 0 0 153 1 0 1.406 46 0.48
36 36 A 0 0 0 0 0 0 0 3 0 1 59 4 0 0 3 1 1 3 3 23 152 0 0 1.299 43 0.47
37 37 A 3 0 0 0 0 0 0 78 4 0 6 1 0 0 1 3 0 1 0 3 152 0 0 0.959 32 0.68
38 38 A 1 19 0 0 0 0 0 8 1 9 20 18 3 0 0 2 0 1 15 1 137 0 0 2.046 68 0.13
39 39 A 2 0 2 0 0 0 0 2 0 0 23 34 1 0 4 29 1 1 2 0 122 0 0 1.605 53 0.30
40 40 A 0 0 0 0 0 0 0 0 0 3 1 0 96 0 0 0 0 0 0 0 122 0 0 0.192 6 0.92
41 41 A 0 0 0 0 0 0 0 0 0 91 1 0 0 0 0 6 0 0 0 2 122 1 0 0.357 11 0.86
42 42 A 0 0 0 0 0 0 0 3 6 18 25 3 1 0 8 24 0 0 12 1 119 0 0 1.890 63 0.26
43 43 A 0 0 0 0 0 0 1 37 0 1 4 0 0 0 0 0 0 3 4 50 113 0 0 1.149 38 0.61
44 44 A 0 5 0 0 30 5 57 0 0 1 0 0 0 2 0 0 0 0 0 0 110 0 0 1.095 36 0.83
45 45 A 0 0 0 0 0 0 0 0 2 79 1 10 0 0 1 0 0 3 2 0 101 0 0 0.765 25 0.68
46 46 A 0 0 0 0 0 0 0 0 0 0 3 0 0 8 2 76 1 0 9 0 88 0 0 0.879 29 0.60
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
39 21 21 1 gTi
62 21 45 1 pAp
130 21 39 1 gCr
//