Complet list of 1jfn hssp file
Complete list of 1jfn.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1JFN
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-05-02
HEADER LIPID TRANSPORT 21-JUN-01 1JFN
COMPND MOL_ID: 1; MOLECULE: APOLIPOPROTEIN A, KIV-T6; CHAIN: A; FRAGMENT: APO
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR B.MADEREGGER,W.BERMEL,A.HRZENJAK,G.M.KOSTNER,H.STERK
DBREF 1JFN A 14 119 UNP P08519 APOA_HUMAN 3665 3770
SEQLENGTH 119
NCHAIN 1 chain(s) in 1JFN data set
NALIGN 17
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q9UIR8_HUMAN 1.00 1.00 15 119 1 105 105 0 0 105 Q9UIR8 Apolipoprotein(A) (Fragment) OS=Homo sapiens GN=APOA PE=2 SV=1
2 : Q9UIR7_HUMAN 0.91 0.96 15 117 1 103 103 0 0 113 Q9UIR7 Apolipoprotein(A) (Fragment) OS=Homo sapiens GN=APOA PE=4 SV=1
3 : Q9UIR6_HUMAN 0.77 0.84 15 117 1 103 103 0 0 113 Q9UIR6 Apolipoprotein(A) (Fragment) OS=Homo sapiens GN=APOA PE=2 SV=1
4 : Q9UIR5_HUMAN4KIV 0.74 0.92 15 116 1 102 102 0 0 113 Q9UIR5 Apolipoprotein(A) (Fragment) OS=Homo sapiens GN=APOA PE=1 SV=1
5 : Q28911_MACFA 0.70 0.85 23 116 41 134 94 0 0 145 Q28911 Apolipoprotein[a] protein (Fragment) OS=Macaca fascicularis GN=apolipoprotein[a] PE=2 SV=2
6 : G3S514_GORGO 0.66 0.80 17 116 20 119 100 0 0 132 G3S514 Uncharacterized protein OS=Gorilla gorilla gorilla PE=4 SV=1
7 : LPAL2_HUMAN 0.65 0.82 17 117 20 120 101 0 0 132 Q16609 Putative apolipoprotein(a)-like protein 2 OS=Homo sapiens GN=LPAL2 PE=5 SV=1
8 : F1Q421_CANFA 0.57 0.77 1 115 355 469 115 0 0 812 F1Q421 Plasminogen OS=Canis familiaris GN=PLG PE=3 SV=2
9 : M3X3T9_FELCA 0.57 0.76 1 115 362 476 115 0 0 821 M3X3T9 Uncharacterized protein (Fragment) OS=Felis catus GN=PLG PE=3 SV=1
10 : Q8N696_HUMAN 0.45 0.67 15 103 4 94 91 2 2 95 Q8N696 Antiangiogenic AK38 protein OS=Homo sapiens PE=4 SV=1
11 : H2N1X4_ORYLA 0.42 0.68 2 119 349 466 118 0 0 548 H2N1X4 Uncharacterized protein OS=Oryzias latipes GN=plg PE=4 SV=1
12 : Q50LG6_ORYLA 0.42 0.68 2 119 349 466 118 0 0 797 Q50LG6 Plasminogen OS=Oryzias latipes GN=plg PE=2 SV=1
13 : S4RIK4_PETMA 0.38 0.48 25 104 42 147 106 3 26 164 S4RIK4 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
14 : PLMN_PETMA 0.33 0.53 2 119 58 163 118 2 12 325 P33574 Plasminogen (Fragments) OS=Petromyzon marinus PE=1 SV=1
15 : B4DPQ8_HUMAN 0.32 0.46 25 116 47 163 118 4 27 164 B4DPQ8 cDNA FLJ61329, moderately similar to Hepatocyte growth factor-like protein OS=Homo sapiens PE=2 SV=1
16 : G3R2I7_GORGO 0.31 0.53 2 113 172 284 118 3 11 593 G3R2I7 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101125814 PE=3 SV=1
17 : THRB_BOVIN 1YCP 0.30 0.51 2 111 191 301 115 4 9 625 P00735 Prothrombin OS=Bos taurus GN=F2 PE=1 SV=2
## ALIGNMENTS 1 - 17
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A A 0 0 150 3 61 SS
2 2 A R + 0 0 224 8 34 PP RR R RR
3 3 A I - 0 0 157 8 53 IL VV G LV
4 4 A H - 0 0 163 8 80 TS PP D AT
5 5 A H - 0 0 102 8 93 TS RR E SV
6 6 A H + 0 0 152 8 83 EE CC Q QE
7 7 A H S S+ 0 0 158 8 94 YH GG T HV
8 8 A H - 0 0 140 8 107 LL DD P CI
9 9 A H S S+ 0 0 154 8 79 DD SS H PP
10 10 A I + 0 0 66 8 90 AA PP R VR
11 11 A E + 0 0 112 8 77 PP DD H GS
12 12 A G S S+ 0 0 57 8 91 AV PP T YG
13 13 A R - 0 0 164 8 97 SS DD F TG
14 14 A A S S+ 0 0 98 8 82 VV EE S GS
15 15 A P S S- 0 0 112 13 35 PPPP PPPAA P PT
16 16 A T S S- 0 0 90 13 85 TTPT PPSVV Q FT
17 17 A E - 0 0 71 15 73 EEEE EEEELSS S CS
18 18 A Q S S+ 0 0 150 15 80 QQKQ TTQQGPP F DQ
19 19 A S S S- 0 0 53 15 69 SSST GGTTPPP A VS
20 20 A P - 0 0 107 15 48 PPPP PPPPPEE G DP
21 21 A G - 0 0 51 15 84 GTVV SSVVSEE L TL
22 22 A V + 0 0 92 15 77 VVVV VVVVENN T KL
23 23 A Q + 0 0 134 16 58 QQQRQQQQQQNN T AE
24 24 A D - 0 0 59 16 51 DDDQDEEEEDDD A ST
25 25 A a - 0 0 49 18 0 CCCCCCCCCCCCCCCCC
26 26 A Y B -a 101 0A 23 18 55 YYYYYYYYYMYYMVIYV
27 27 A H S >S- 0 0 80 18 81 HHHHHHHHRFEEVKMDP
28 28 A G T 5S- 0 0 50 18 22 GGGGGGSGGGGGGGNGD
29 29 A D T 5S- 0 0 62 18 63 DDDNDNNNNNNNLTNRR
30 30 A G T > 5S+ 0 0 2 18 0 GGGGGGGGGGGGGGGGG
31 31 A Q T 3 5S+ 0 0 133 18 77 QQRQQQQQQKAAIEVLR
32 32 A S T 3 -C 97 0C 0 18 0 TTTTTTTTTTTTTTTTT
41 41 A V T 3 S+ 0 0 71 18 32 VVVVVVVIIVVVTVVLT
42 42 A T T 3 S- 0 0 67 18 49 TTTTTTTTTTSSSSGSS
43 43 A G S < S+ 0 0 47 18 0 GGGGGGGGGGGGGGGGG
44 44 A R - 0 0 70 18 66 RRRRRRRRKTKKRKLAS
45 45 A T B -B 39 0B 58 18 78 TTTTTITKKPKKQASPR
46 46 A b B -D 87 0D 0 18 0 CCCCCCCCCCCCCCCCC
47 47 A Q - 0 0 2 18 15 QQQQQQQQQQQQQQQQL
48 48 A S > - 0 0 35 18 76 SSSSAAASPEMMFAAPA
49 49 A W T 3 S+ 0 0 3 18 0 WWWWWWWWWWWWWWWWW
50 50 A S T 3 S+ 0 0 53 18 26 SSSSSSSSSASSSASAS
51 51 A S < + 0 0 12 18 31 SSSSSSSSSASSTSHSS
52 52 A M + 0 0 49 18 66 MMMMMMMMMQMMNQKEE
53 53 A T S S+ 0 0 125 18 80 TTITETTTVESSKTFAQ
54 54 A P S S+ 0 0 45 18 21 PPPPPPPPPPPPPPpTa
55 55 A H S S- 0 0 7 16 23 HHHHHHHHHHHHH.qY.
56 56 A W + 0 0 166 16 51 WWWRQQQRRRSSr.wr.
57 57 A H - 0 0 33 17 48 HHHHHHHHHHHHs.aqk
58 58 A Q S S+ 0 0 142 17 79 QQQQNSSEVSDDH.LAD
59 59 A R S S- 0 0 179 17 46 RRRRRRRKKtKKh.RRQ
60 60 A T > - 0 0 23 14 42 TTTTTTTTTiSSt....
61 61 A T G > S+ 0 0 15 16 59 TTPPTPPPPPPPPGY..
62 62 A E G 3 S+ 0 0 86 17 61 EEEEEEEEEGQQWDM.D
63 63 A Y G < S+ 0 0 193 17 94 YYNNNKKHRTNNTVP.F
64 64 A Y X> + 0 0 139 17 55 YYYYYYYFYNFFHYT.N
65 65 A P T 34 + 0 0 109 18 48 PPPPPPPPPKPPPSLNP
66 66 A N T 34 S+ 0 0 156 18 86 NNNNNNNEDWEEECRWA
67 67 A G T <4 S- 0 0 39 18 66 GGADADDAAAAALQNGV
68 68 A G < + 0 0 38 18 30 GGGGGGGGGGGGGGGLP
69 69 A L + 0 0 3 18 19 LLLLLLLLLLLLLLLGL
70 70 A T > + 0 0 61 18 82 TTTTIIITTERREVEGA
71 71 A R T 3 S- 0 0 143 18 80 RREMRSSMMKRRDSEHE
72 72 A N T 3 S+ 0 0 18 18 12 NNNNNNNNNNNNNNNAN
73 73 A Y < - 0 0 82 18 3 YYYYYYYYYYFFFYFFF
74 74 A c + 0 0 0 18 0 CCCCCCCCCCCCCCCCC
75 75 A R B -E 84 0E 42 18 0 RRRRRRRRRRRRRRRRR
76 76 A N > + 0 0 12 18 0 NNNNNNNNNNNNNNNNN
77 77 A P T 3 S+ 0 0 61 18 0 PPPPPPPPPPPPPPPPP
78 78 A D T 3 S- 0 0 103 18 0 DDDDDDDDDDDDDDDDD
79 79 A A < + 0 0 34 18 62 AASAPCCAAGGGHGGNG
80 80 A E - 0 0 83 18 43 EEGDVSSDDDDDGEDDD
81 81 A I S S- 0 0 99 18 86 IIKTAAAKKIRRVKPIE
82 82 A S S S- 0 0 9 18 78 SRQGAGGSSnAAsLgRe
83 83 A P + 0 0 0 18 9 PPPPPPPPPpPPpPpPa
84 84 A W E -EF 75 96E 32 18 2 WWWWYWWWWWWWWWWWW
85 85 A b E - F 0 95E 0 18 0 CCCCCCCCCCCCCCCCC
86 86 A Y E - F 0 94E 37 18 12 YYYFYYYYYYYYYYHFY
87 87 A T B -D 46 0D 0 18 24 TTTTTTTTTTTTTTTVV
88 88 A M S S+ 0 0 85 18 59 MMTMMTTTTMTTTTTLA
89 89 A D S > S- 0 0 58 18 17 DDDDDDDDDNDDDEDnD
90 90 A P T 3 S+ 0 0 90 17 26 PPPPPPPPPPPPP.PdQ
91 91 A N T 3 S+ 0 0 125 17 79 NSCSNNNSSRKKA.ARP
92 92 A V < - 0 0 17 17 49 VVVIVVVVVKVVQ.VLG
93 93 A R - 0 0 153 17 45 RRRRRRRRRLRRR.RSD
94 94 A W E +F 86 0E 127 17 5 WWWWWWWWWFWWW.FWF
95 95 A E E -F 85 0E 64 17 12 EEEEEEEEEDEEE.QEE
96 96 A Y E -F 84 0E 40 18 29 YYYYYYYFFYYYVYSYY
97 97 A c B -C 40 0C 1 18 0 CCCCCCCCCCCCCCCCC
98 98 A N S S+ 0 0 29 18 48 NNNNNNNNNDSSSNGDD
99 99 A L + 0 0 13 18 20 LLLLLLLLLILLVVILL
100 100 A T - 0 0 55 18 71 TTTTTTTRKPKKPPKAN
101 101 A Q B -a 26 0A 135 18 85 QRQRRWRKKLKKASSQY
102 102 A a - 0 0 23 18 0 CCCCCCCCCCCCCCCCC
103 103 A P + 0 0 116 18 77 PPSSSSSLPASSRTRQE
104 104 A V - 0 0 98 17 64 VVEDDDDDD EEDGPTE
105 105 A T + 0 0 139 16 72 TTTTADDPR PP GRPP
106 106 A E S S- 0 0 146 16 70 EEEEEEEEE TT PVTV
107 107 A S + 0 0 82 16 73 SSSGGGGAE KK TSQD
108 108 A S + 0 0 64 16 53 SSGTTTTSS SS GGAG
109 109 A V - 0 0 94 16 72 VVVVAVVAA PP SAAD
110 110 A L + 0 0 164 16 84 LLLVVFFTT QQ EMPL
111 111 A A + 0 0 71 16 82 ATEAAVVNK PP YAPG
112 112 A T + 0 0 135 15 79 TTTPPPPSS QQ HRT
113 113 A S S S+ 0 0 126 15 78 SPPPPLLPP DD ENP
114 114 A T S S- 0 0 120 14 36 TTTTNTTAT TT IT
115 115 A A - 0 0 93 14 67 AVVVVVVVV QQ LA
116 116 A V - 0 0 100 12 77 VAVITII SS TA
117 117 A S S S- 0 0 83 8 29 SPP P PP P
118 118 A E 0 0 177 5 58 E AA A
119 119 A Q 0 0 217 5 39 Q EE Q
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 33 0 67 0 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.38
2 2 A 0 0 0 0 0 0 0 0 0 25 0 0 0 0 75 0 0 0 0 0 8 0 0 0.562 18 0.66
3 3 A 38 25 25 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 0 8 0 0 1.321 44 0.47
4 4 A 0 0 0 0 0 0 0 0 13 25 13 25 0 13 0 0 0 0 0 13 8 0 0 1.733 57 0.20
5 5 A 13 0 0 0 0 0 0 0 0 0 25 13 0 13 25 0 0 13 0 0 8 0 0 1.733 57 0.07
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 25 13 0 0 25 38 0 0 8 0 0 1.321 44 0.16
7 7 A 13 0 0 0 0 0 13 25 0 0 0 13 0 38 0 0 0 0 0 0 8 0 0 1.494 49 0.06
8 8 A 0 25 13 0 0 0 0 0 0 13 0 0 13 13 0 0 0 0 0 25 8 0 0 1.733 57 -0.07
9 9 A 0 0 0 0 0 0 0 0 0 25 25 0 0 25 0 0 0 0 0 25 8 0 0 1.386 46 0.20
10 10 A 13 0 13 0 0 0 0 0 25 25 0 0 0 0 25 0 0 0 0 0 8 0 0 1.560 52 0.09
11 11 A 0 0 0 0 0 0 0 13 0 25 13 0 0 13 0 0 0 13 0 25 8 0 0 1.733 57 0.23
12 12 A 13 0 0 0 0 0 13 25 13 25 0 13 0 0 0 0 0 0 0 0 8 0 0 1.733 57 0.09
13 13 A 0 0 0 0 13 0 0 13 0 0 25 13 0 0 13 0 0 0 0 25 8 0 0 1.733 57 0.02
14 14 A 25 0 0 0 0 0 0 13 13 0 25 0 0 0 0 0 0 25 0 0 8 0 0 1.560 52 0.18
15 15 A 0 0 0 0 0 0 0 0 15 77 0 8 0 0 0 0 0 0 0 0 13 0 0 0.687 22 0.65
16 16 A 15 0 0 0 8 0 0 0 0 23 8 38 0 0 0 0 8 0 0 0 13 0 0 1.586 52 0.14
17 17 A 0 7 0 0 0 0 0 0 0 0 27 0 7 0 0 0 0 60 0 0 15 0 0 1.020 34 0.26
18 18 A 0 0 0 0 7 0 0 7 0 13 0 13 0 0 0 7 47 0 0 7 15 0 0 1.615 53 0.20
19 19 A 7 0 0 0 0 0 0 13 7 20 33 20 0 0 0 0 0 0 0 0 15 0 0 1.640 54 0.30
20 20 A 0 0 0 0 0 0 0 7 0 73 0 0 0 0 0 0 0 13 0 7 15 0 0 0.857 28 0.51
21 21 A 27 13 0 0 0 0 0 13 0 0 20 13 0 0 0 0 0 13 0 0 15 0 0 1.749 58 0.15
22 22 A 60 7 0 0 0 0 0 0 0 0 0 7 0 0 0 7 0 7 13 0 15 0 0 1.297 43 0.22
23 23 A 0 0 0 0 0 0 0 0 6 0 0 6 0 0 6 0 63 6 13 0 16 0 0 1.247 41 0.42
24 24 A 0 0 0 0 0 0 0 0 6 0 6 6 0 0 0 0 6 25 0 50 16 0 0 1.386 46 0.48
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
26 26 A 11 0 6 11 0 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.884 29 0.44
27 27 A 6 0 0 6 6 0 0 0 0 6 0 0 0 50 6 6 0 11 0 6 18 0 0 1.715 57 0.19
28 28 A 0 0 0 0 0 0 0 83 0 0 6 0 0 0 0 0 0 0 6 6 18 0 0 0.634 21 0.78
29 29 A 0 6 0 0 0 0 0 0 0 0 0 6 0 0 11 0 0 0 50 28 18 0 0 1.268 42 0.37
30 30 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
31 31 A 6 6 6 0 0 0 0 0 11 0 0 0 0 0 11 6 50 6 0 0 18 0 0 1.638 54 0.23
32 32 A 0 0 0 0 0 0 0 17 0 0 67 0 0 0 0 0 0 6 11 0 18 0 0 0.974 32 0.54
33 33 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
34 34 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 6 0 0 0 18 0 0 0.215 7 0.93
35 35 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
36 36 A 11 6 6 0 0 0 0 0 0 0 17 50 0 0 6 6 0 0 0 0 18 0 0 1.532 51 0.28
37 37 A 6 6 0 6 22 0 11 0 11 0 22 11 0 0 0 6 0 0 0 0 18 0 0 2.043 68 0.08
38 38 A 0 0 0 0 11 0 0 0 22 0 61 0 0 0 6 0 0 0 0 0 18 0 0 1.040 34 0.37
39 39 A 6 6 0 0 0 0 0 0 0 0 0 72 0 0 0 6 0 11 0 0 18 0 0 0.961 32 0.48
40 40 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
41 41 A 72 6 11 0 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 0 18 0 0 0.884 29 0.68
42 42 A 0 0 0 0 0 0 0 6 0 0 33 61 0 0 0 0 0 0 0 0 18 0 0 0.828 27 0.50
43 43 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
44 44 A 0 6 0 0 0 0 0 0 6 0 6 6 0 0 56 22 0 0 0 0 18 0 0 1.303 43 0.34
45 45 A 0 0 6 0 0 0 0 0 6 11 6 39 0 0 6 22 6 0 0 0 18 0 0 1.749 58 0.22
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
47 47 A 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 0 0 18 0 0 0.215 7 0.84
48 48 A 0 0 0 11 6 0 0 0 33 11 33 0 0 0 0 0 0 6 0 0 18 0 0 1.542 51 0.24
49 49 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
50 50 A 0 0 0 0 0 0 0 0 17 0 83 0 0 0 0 0 0 0 0 0 18 0 0 0.451 15 0.73
51 51 A 0 0 0 0 0 0 0 0 6 0 83 6 0 6 0 0 0 0 0 0 18 0 0 0.634 21 0.68
52 52 A 0 0 0 67 0 0 0 0 0 0 0 0 0 0 0 6 11 11 6 0 18 0 0 1.080 36 0.33
53 53 A 6 0 6 0 6 0 0 0 6 0 11 44 0 0 0 6 6 11 0 0 18 0 0 1.812 60 0.20
54 54 A 0 0 0 0 0 0 0 0 6 89 0 6 0 0 0 0 0 0 0 0 18 2 1 0.426 14 0.79
55 55 A 0 0 0 0 0 0 6 0 0 0 0 0 0 88 0 0 6 0 0 0 16 0 0 0.463 15 0.77
56 56 A 0 0 0 0 0 31 0 0 0 0 13 0 0 0 38 0 19 0 0 0 16 0 3 1.305 43 0.48
57 57 A 0 0 0 0 0 0 0 0 6 0 6 0 0 76 0 6 6 0 0 0 17 0 0 0.872 29 0.52
58 58 A 6 6 0 0 0 0 0 0 6 0 18 0 0 6 0 0 29 6 6 18 17 0 0 1.972 65 0.21
59 59 A 0 0 0 0 0 0 0 0 0 0 0 6 0 6 59 24 6 0 0 0 17 3 2 1.153 38 0.53
60 60 A 0 0 7 0 0 0 0 0 0 0 14 79 0 0 0 0 0 0 0 0 14 0 0 0.656 21 0.57
61 61 A 0 0 0 0 0 0 6 6 0 63 0 25 0 0 0 0 0 0 0 0 16 0 0 0.987 32 0.40
62 62 A 0 0 0 6 0 6 0 6 0 0 0 0 0 0 0 0 12 59 0 12 17 0 0 1.316 43 0.38
63 63 A 6 0 0 0 6 0 18 0 0 6 0 12 0 6 6 12 0 0 29 0 17 0 0 2.003 66 0.06
64 64 A 0 0 0 0 18 0 59 0 0 0 0 6 0 6 0 0 0 0 12 0 17 0 0 1.203 40 0.44
65 65 A 0 6 0 0 0 0 0 0 0 78 6 0 0 0 0 6 0 0 6 0 18 0 0 0.838 27 0.52
66 66 A 0 0 0 0 0 11 0 0 6 0 0 0 6 0 6 0 0 22 44 6 18 0 0 1.581 52 0.14
67 67 A 6 6 0 0 0 0 0 22 39 0 0 0 0 0 0 0 6 0 6 17 18 0 0 1.642 54 0.33
68 68 A 0 6 0 0 0 0 0 89 0 6 0 0 0 0 0 0 0 0 0 0 18 0 0 0.426 14 0.69
69 69 A 0 94 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.215 7 0.80
70 70 A 6 0 17 0 0 0 0 6 6 0 0 39 0 0 11 0 0 17 0 0 18 0 0 1.690 56 0.17
71 71 A 0 0 0 17 0 0 0 0 0 0 17 0 0 6 33 6 0 17 0 6 18 0 0 1.744 58 0.20
72 72 A 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 0 0 94 0 18 0 0 0.215 7 0.87
73 73 A 0 0 0 0 33 0 67 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.637 21 0.96
74 74 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 18 0 0 0.000 0 1.00
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 18 0 0 0.000 0 1.00
77 77 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
78 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 18 0 0 0.000 0 1.00
79 79 A 0 0 0 0 0 0 0 33 33 6 6 0 11 6 0 0 0 0 6 0 18 0 0 1.619 54 0.38
80 80 A 6 0 0 0 0 0 0 11 0 0 11 0 0 0 0 0 0 22 0 50 18 0 0 1.330 44 0.56
81 81 A 6 0 28 0 0 0 0 0 17 6 0 6 0 0 11 22 0 6 0 0 18 0 0 1.875 62 0.14
82 82 A 0 6 0 0 0 0 0 22 17 0 28 0 0 0 11 0 6 6 6 0 18 0 4 1.875 62 0.21
83 83 A 0 0 0 0 0 0 0 0 6 94 0 0 0 0 0 0 0 0 0 0 18 0 0 0.215 7 0.90
84 84 A 0 0 0 0 0 94 6 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.215 7 0.97
85 85 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
86 86 A 0 0 0 0 11 0 83 0 0 0 0 0 0 6 0 0 0 0 0 0 18 0 0 0.557 18 0.87
87 87 A 11 0 0 0 0 0 0 0 0 0 0 89 0 0 0 0 0 0 0 0 18 0 0 0.349 11 0.76
88 88 A 0 6 0 33 0 0 0 0 6 0 0 56 0 0 0 0 0 0 0 0 18 0 0 1.014 33 0.41
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 11 83 18 1 1 0.557 18 0.82
90 90 A 0 0 0 0 0 0 0 0 0 88 0 0 0 0 0 0 6 0 0 6 17 0 0 0.444 14 0.73
91 91 A 0 0 0 0 0 0 0 0 12 6 24 0 6 0 12 12 0 0 29 0 17 0 0 1.789 59 0.21
92 92 A 71 6 6 0 0 0 0 6 0 0 0 0 0 0 0 6 6 0 0 0 17 0 0 1.079 36 0.51
93 93 A 0 6 0 0 0 0 0 0 0 0 6 0 0 0 82 0 0 0 0 6 17 0 0 0.660 22 0.54
94 94 A 0 0 0 0 18 82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 17 0 0 0.466 15 0.95
95 95 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 88 0 6 17 0 0 0.444 14 0.88
96 96 A 6 0 0 0 11 0 78 0 0 0 6 0 0 0 0 0 0 0 0 0 18 0 0 0.761 25 0.71
97 97 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
98 98 A 0 0 0 0 0 0 0 6 0 0 17 0 0 0 0 0 0 0 61 17 18 0 0 1.059 35 0.52
99 99 A 11 78 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 18 0 0 0.684 22 0.79
100 100 A 0 0 0 0 0 0 0 0 6 17 0 44 0 0 6 22 0 0 6 0 18 0 0 1.475 49 0.28
101 101 A 0 6 0 0 0 6 6 0 6 0 11 0 0 0 22 22 22 0 0 0 18 0 0 1.889 63 0.15
102 102 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 18 0 0 0.000 0 1.00
103 103 A 0 6 0 0 0 0 0 0 6 22 39 6 0 0 11 0 6 6 0 0 18 0 0 1.749 58 0.23
104 104 A 18 0 0 0 0 0 0 6 0 6 0 6 0 0 0 0 0 24 0 41 17 0 0 1.512 50 0.35
105 105 A 0 0 0 0 0 0 0 6 6 31 0 31 0 0 13 0 0 0 0 13 16 0 0 1.593 53 0.27
106 106 A 13 0 0 0 0 0 0 0 0 6 0 19 0 0 0 0 0 63 0 0 16 0 0 1.041 34 0.29
107 107 A 0 0 0 0 0 0 0 25 6 0 31 6 0 0 0 13 6 6 0 6 16 0 0 1.836 61 0.27
108 108 A 0 0 0 0 0 0 0 25 6 0 44 25 0 0 0 0 0 0 0 0 16 0 0 1.228 40 0.46
109 109 A 44 0 0 0 0 0 0 0 31 13 6 0 0 0 0 0 0 0 0 6 16 0 0 1.332 44 0.28
110 110 A 13 31 0 6 13 0 0 0 0 6 0 13 0 0 0 0 13 6 0 0 16 0 0 1.923 64 0.16
111 111 A 13 0 0 0 0 0 6 6 31 19 0 6 0 0 0 6 0 6 6 0 16 0 0 1.977 65 0.18
112 112 A 0 0 0 0 0 0 0 0 0 27 13 33 0 7 7 0 13 0 0 0 15 0 0 1.617 53 0.20
113 113 A 0 13 0 0 0 0 0 0 0 47 13 0 0 0 0 0 0 7 7 13 15 0 0 1.523 50 0.21
114 114 A 0 0 7 0 0 0 0 0 7 0 0 79 0 0 0 0 0 0 7 0 14 0 0 0.755 25 0.64
115 115 A 57 7 0 0 0 0 0 0 21 0 0 0 0 0 0 0 14 0 0 0 14 0 0 1.116 37 0.32
116 116 A 25 0 25 0 0 0 0 0 17 0 17 17 0 0 0 0 0 0 0 0 12 0 0 1.589 53 0.23
117 117 A 0 0 0 0 0 0 0 0 0 75 25 0 0 0 0 0 0 0 0 0 8 0 0 0.562 18 0.70
118 118 A 0 0 0 0 0 0 0 0 60 0 0 0 0 0 0 0 0 40 0 0 5 0 0 0.673 22 0.42
119 119 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 40 0 0 5 0 0 0.673 22 0.60
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
10 46 49 1 tFi
10 69 73 1 nGp
13 33 74 24 rPKYLPFSRCEWTNARQHLSVMLSAs
13 36 101 1 hFt
13 59 125 1 sGp
15 31 77 3 pNDHq
15 33 82 22 wDKHLPSVPAWDLPPAHTTVMLWa
15 58 129 1 gGp
16 56 227 5 rNVTAEq
16 84 260 1 nRd
17 54 244 4 aKALSk
17 78 272 1 eGa
//