Complet list of 1hp2 hssp file
Complete list of 1hp2.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1HP2
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-30
HEADER TOXIN 12-DEC-00 1HP2
COMPND MOL_ID: 1; MOLECULE: TITYUSTOXIN K ALPHA; CHAIN: A; SYNONYM: TSTX-K AL
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: TITYUS SERRULATUS; ORGANISM_COMMON: BR
AUTHOR K.C.ELLIS,T.C.TENENHOLZ,W.F.GILLY,M.P.BLAUSTEIN,D.J.WEBER
DBREF 1HP2 A 1 37 UNP P46114 SCKA_TITSE 1 37
SEQLENGTH 37
NCHAIN 1 chain(s) in 1HP2 data set
NALIGN 76
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : KAX41_TITSE 1.00 1.00 1 37 1 37 37 0 0 37 P46114 Potassium channel toxin alpha-KTx 4.1 OS=Tityus serrulatus PE=1 SV=1
2 : KAX46_TITST 0.97 1.00 1 37 1 37 37 0 0 37 P0CB56 Potassium channel toxin alpha-KTx 4.6 OS=Tityus stigmurus PE=1 SV=1
3 : KAX45_TITCO 0.95 0.97 1 37 23 59 37 0 0 59 Q5G8B6 Potassium channel toxin alpha-KTx 4.5 OS=Tityus costatus PE=1 SV=1
4 : KAX44_TITOB 0.86 0.89 1 37 1 37 37 0 0 37 P60210 Potassium channel toxin alpha-KTx 4.4 OS=Tityus obscurus PE=1 SV=1
5 : KAX43_TITDI 0.81 0.86 1 36 1 36 36 0 0 37 P59925 Potassium channel toxin alpha-KTx 4.3 OS=Tityus discrepans PE=1 SV=1
6 : KAX19_CENLM 0.71 0.74 2 35 2 35 34 0 0 36 P59848 Potassium channel toxin alpha-KTx 1.9 (Fragment) OS=Centruroides limbatus PE=1 SV=1
7 : KAX26_CENLM 0.70 0.82 2 34 2 34 33 0 0 34 P59849 Potassium channel toxin alpha-KTx 2.6 (Fragment) OS=Centruroides limbatus PE=1 SV=1
8 : KA232_VAEMS 0.66 0.69 5 36 4 34 32 1 1 35 P0DJ32 Potassium channel toxin alpha-KTx 23.2 OS=Vaejovis mexicanus smithi PE=1 SV=1
9 : KAX2D_CENSU 0.61 0.79 1 37 1 38 38 1 1 38 P85529 Potassium channel toxin alpha-KTx 2.13 OS=Centruroides suffusus suffusus PE=1 SV=1
10 : KAX1A_PARTR 0.60 0.83 3 37 2 36 35 0 0 37 P83112 Potassium channel toxin alpha-KTx 1.10 OS=Parabuthus transvaalicus PE=1 SV=1
11 : KAX31_ANDMA 0.60 0.66 3 37 4 37 35 1 1 38 P24662 Potassium channel toxin alpha-KTx 3.1 OS=Androctonus mauretanicus mauretanicus PE=1 SV=2
12 : KAX34_LEIQH 0.60 0.69 3 37 4 37 35 1 1 38 P46110 Potassium channel toxin alpha-KTx 3.4 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
13 : KAX38_HOTTS 0.60 0.71 3 37 4 37 35 1 1 38 P59886 Potassium channel toxin alpha-KTx 3.8 OS=Hottentotta tamulus sindicus PE=1 SV=1
14 : KA231_VAEMS 0.59 0.62 5 36 4 34 32 1 1 36 P0DJ31 Potassium channel toxin alpha-KTx 23.1 OS=Vaejovis mexicanus smithi PE=1 SV=1
15 : KAX22_CENMA 0.59 0.78 2 37 2 38 37 1 1 39 P40755 Potassium channel toxin alpha-KTx 2.2 OS=Centruroides margaritatus PE=1 SV=1
16 : KAX27_CENLL 0.59 0.76 3 35 3 36 34 1 1 36 P45630 Potassium channel toxin alpha-KTx 2.7 (Fragment) OS=Centruroides limpidus limpidus PE=1 SV=1
17 : KAX3B_ODODO 0.59 0.71 4 37 5 37 34 1 1 38 P0C909 Potassium channel toxin alpha-KTx 3.11 OS=Odontobuthus doriae PE=1 SV=1
18 : A0RZD1_MESMA 0.58 0.78 2 37 22 57 36 0 0 57 A0RZD1 Potassium-channel toxin protein OS=Mesobuthus martensii GN=TX1 PE=3 SV=1
19 : KAX15_MESMA 0.58 0.78 2 37 22 57 36 0 0 57 Q9NII6 Potassium channel toxin alpha-KTx 1.5 OS=Mesobuthus martensii PE=1 SV=1
20 : KAX25_CENLM 0.58 0.81 3 37 3 38 36 1 1 39 P59847 Potassium channel toxin alpha-KTx 2.5 OS=Centruroides limbatus PE=1 SV=1
21 : KAX2A_CENEL 0.58 0.76 1 37 1 38 38 1 1 38 P0C163 Potassium channel toxin alpha-KTx 2.10 OS=Centruroides elegans PE=1 SV=1
22 : KAX2B_CENEL 0.58 0.75 2 36 2 37 36 1 1 39 P0C164 Potassium channel toxin alpha-KTx 2.11 OS=Centruroides elegans PE=1 SV=1
23 : B8XH28_BUTOS 0.57 0.65 1 37 24 59 37 1 1 59 B8XH28 Putative potassium channel toxin Tx1 (Precursor) OS=Buthus occitanus israelis PE=3 SV=1
24 : B8XH29_BUTOS 0.57 0.65 1 37 24 59 37 1 1 60 B8XH29 Putative potassium channel toxin Tx260 OS=Buthus occitanus israelis PE=3 SV=1
25 : KAX24_CENNO 0.57 0.74 2 36 2 36 35 0 0 38 Q9TXD1 Potassium channel toxin alpha-KTx 2.4 OS=Centruroides noxius PE=1 SV=1
26 : KAX2C_CENEL 0.57 0.74 2 35 2 36 35 1 1 39 P0C165 Potassium channel toxin alpha-KTx 2.12 OS=Centruroides elegans PE=1 SV=1
27 : KAX37_ORTSC 0.57 0.65 1 37 2 37 37 1 1 38 P55896 Potassium channel toxin alpha-KTx 3.7 OS=Orthochirus scrobiculosus PE=1 SV=1
28 : KAX3A_BUTOS 0.57 0.65 1 37 24 59 37 1 1 59 P0C908 Potassium channel toxin alpha-KTx 3.10 OS=Buthus occitanus israelis PE=1 SV=1
29 : KAX3D_MESEU 0.57 0.66 3 37 3 36 35 1 1 37 P86396 Potassium channel toxin alpha-KTx 3.13 OS=Mesobuthus eupeus PE=1 SV=1
30 : B8XH48_BUTOS 0.56 0.64 2 37 26 60 36 1 1 61 B8XH48 Putative potassium channel toxin Tx821 OS=Buthus occitanus israelis PE=3 SV=1
31 : KAX21_CENNO 0.56 0.72 2 36 2 37 36 1 1 39 P08815 Potassium channel toxin alpha-KTx 2.1 OS=Centruroides noxius PE=1 SV=3
32 : KAX28_CENEL 0.56 0.72 2 36 2 37 36 1 1 39 P0C161 Potassium channel toxin alpha-KTx 2.8 OS=Centruroides elegans PE=1 SV=1
33 : KAX29_CENEL 0.56 0.75 2 36 2 37 36 1 1 39 P0C162 Potassium channel toxin alpha-KTx 2.9 OS=Centruroides elegans PE=1 SV=1
34 : V9LLY8_MESMA 0.56 0.78 2 37 22 57 36 0 0 57 V9LLY8 Toxin BmTX4 OS=Mesobuthus martensii PE=3 SV=1
35 : KAX23_CENLL 0.55 0.76 1 37 1 38 38 1 1 38 P45629 Potassium channel toxin alpha-KTx 2.3 OS=Centruroides limpidus limpidus PE=1 SV=1
36 : K7XFK5_MESGB 0.54 0.66 3 37 26 59 35 1 1 60 K7XFK5 Toxin alpha-KTx3.16 OS=Mesobuthus gibbosus GN=Tx4 PE=3 SV=1
37 : KA159_LYCMC 0.54 0.65 1 37 24 60 37 0 0 60 D9U2A8 Potassium channel toxin alpha-KTx 15.9 OS=Lychas mucronatus PE=2 SV=1
38 : KAX1B_CENNO 0.54 0.63 2 36 2 36 35 0 0 37 P0C182 Potassium channel toxin alpha-KTx 1.11 OS=Centruroides noxius PE=1 SV=1
39 : KAX32_LEIQH 0.54 0.62 1 37 2 37 37 1 1 38 P46111 Potassium channel toxin alpha-KTx 3.2 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
40 : KAX33_LEIQH 0.54 0.62 1 37 2 37 37 1 1 38 P46112 Potassium channel toxin alpha-KTx 3.3 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
41 : KAX36_MESMA 0.54 0.65 1 37 23 58 37 1 1 60 Q9NII7 Potassium channel toxin alpha-KTx 3.6 OS=Mesobuthus martensii PE=1 SV=1
42 : KA151_ANDAU 0.53 0.69 6 37 7 37 32 1 1 37 P60233 Potassium channel toxin alpha-KTx 15.1 OS=Androctonus australis PE=1 SV=1
43 : KAX14_CENLM 0.53 0.64 1 36 1 36 36 0 0 37 P0C167 Potassium channel toxin alpha-KTx 1.4 OS=Centruroides limbatus PE=1 SV=1
44 : KAX1F_MESMA 0.53 0.78 2 37 22 57 36 0 0 57 H2ER23 Potassium channel toxin alpha-KTx 1.15 OS=Mesobuthus martensii PE=2 SV=1
45 : KA127_LYCMC 0.52 0.70 4 36 27 59 33 0 0 60 P0CI48 Neurotoxin alpha-KTx 12.7 OS=Lychas mucronatus PE=2 SV=1
46 : KAX35_ANDAU 0.51 0.59 1 37 23 58 37 1 1 59 P45696 Potassium channel toxin alpha-KTx 3.5 OS=Androctonus australis GN=KTX2 PE=1 SV=1
47 : KAX3C_ANDAM 0.51 0.62 1 37 2 37 37 1 1 38 P0C8R1 Potassium channel toxin alpha-KTx 3.12 OS=Androctonus amoreuxi PE=1 SV=1
48 : KAX42_TITSE 0.51 0.69 1 35 23 57 35 0 0 57 P56219 Potassium channel toxin alpha-KTx 4.2 OS=Tityus serrulatus PE=1 SV=2
49 : KA121_TITSE 0.50 0.65 4 37 7 40 34 0 0 40 P59936 Potassium channel toxin alpha-KTx 12.1 OS=Tityus serrulatus PE=1 SV=2
50 : KA122_TITTR 0.50 0.65 4 37 7 40 34 0 0 40 P0C168 Potassium channel toxin alpha-KTx 12.2 OS=Tityus trivittatus PE=1 SV=1
51 : KA123_TITCO 0.50 0.65 4 37 7 40 34 0 0 40 P0C185 Potassium channel toxin alpha-KTx 12.3 OS=Tityus costatus PE=1 SV=1
52 : KA124_TITST 0.50 0.65 4 37 7 40 34 0 0 40 P0C8L1 Potassium channel toxin alpha-KTx 12.4 OS=Tityus stigmurus PE=1 SV=1
53 : KAX16_MESMA 0.50 0.69 2 37 23 58 36 0 0 58 Q9NII5 Potassium channel toxin alpha-KTx 1.6 OS=Mesobuthus martensii PE=1 SV=1
54 : Q1EFP8_MESMA 0.50 0.69 2 37 23 58 36 0 0 58 Q1EFP8 Potassium channel toxin BmKTX2' OS=Mesobuthus martensii PE=3 SV=1
55 : I6NXS5_HETLA 0.48 0.61 5 35 1 31 31 0 0 35 I6NXS5 Kv1.3 potassium channel blocker (Fragment) OS=Heterometrus laoticus GN=Tx2 PE=2 SV=1
56 : KA125_LYCMC 0.48 0.67 4 36 27 59 33 0 0 60 P0CH12 Potassium channel toxin alpha-KTx 12.5 OS=Lychas mucronatus PE=2 SV=1
57 : KAX63_HETSP 0.48 0.61 5 35 1 31 31 0 0 34 P59867 Potassium channel toxin alpha-KTx 6.3 OS=Heterometrus spinifer PE=1 SV=1
58 : B8XH43_BUTOS 0.47 0.56 4 37 27 60 34 0 0 60 B8XH43 Putative potassium channel toxin Tx753 OS=Buthus occitanus israelis PE=3 SV=1
59 : KAX1X_MESMA 0.47 0.67 2 37 23 58 36 0 0 58 H2ER22 Potassium channel toxin alpha-KTx Kcug1a OS=Mesobuthus martensii PE=2 SV=1
60 : KAX6A_OPICA 0.47 0.62 6 37 27 58 32 0 0 60 Q6XLL5 Potassium channel toxin alpha-KTx 6.10 OS=Opistophthalmus carinatus PE=2 SV=1
61 : H2CYS1_PANCV 0.46 0.62 1 37 25 61 37 0 0 63 H2CYS1 Alpha-KTx-like peptide OS=Pandinus cavimanus PE=3 SV=1
62 : KA161_MESTA 0.46 0.63 2 36 2 36 35 0 0 36 P0C173 Potassium channel toxin alpha-KTx 16.1 OS=Mesobuthus tamulus PE=1 SV=1
63 : KA162_MESMA 0.46 0.66 2 36 25 59 35 0 0 59 Q9NBG9 Potassium channel toxin alpha-KTx 16.2 OS=Mesobuthus martensii PE=1 SV=1
64 : KA163_MESMA 0.46 0.63 2 36 25 59 35 0 0 59 Q8MQL0 Potassium channel toxin alpha-KTx 16.3 OS=Mesobuthus martensii PE=2 SV=1
65 : KA164_MESEU 0.46 0.63 2 36 25 59 35 0 0 59 D3JXM1 Potassium channel toxin alpha-KTx 16.4 OS=Mesobuthus eupeus PE=1 SV=2
66 : KA167_MESGB 0.46 0.63 2 36 25 59 35 0 0 59 B3EWY1 Potassium channel toxin alpha-KTx 16.7 OS=Mesobuthus gibbosus PE=1 SV=2
67 : KAX13_MESTA 0.46 0.60 2 36 2 36 35 0 0 37 P24663 Potassium channel toxin alpha-KTx 1.3 OS=Mesobuthus tamulus PE=1 SV=2
68 : KAX39_BUTOC 0.46 0.57 1 37 1 36 37 1 1 37 P59290 Potassium channel toxin alpha-KTx 3.9 OS=Buthus occitanus tunetanus GN=KTX3 PE=1 SV=1
69 : V9LLQ7_MESMA 0.46 0.66 2 36 25 59 35 0 0 59 V9LLQ7 Potassium channel toxin BmKcug3 OS=Mesobuthus martensii PE=3 SV=1
70 : KAX11_LEIQH 0.44 0.58 2 37 24 59 36 0 0 59 P13487 Potassium channel toxin alpha-KTx 1.1 OS=Leiurus quinquestriatus hebraeus PE=1 SV=4
71 : KAX1D_LEIQH 0.44 0.56 2 37 2 37 36 0 0 37 P59944 Potassium channel toxin alpha-KTx 1.13 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
72 : KAX1E_MESMA 0.44 0.67 2 37 24 59 36 0 0 59 H2ETQ6 Potassium channel toxin alpha-KTx 1.14 OS=Mesobuthus martensii PE=2 SV=1
73 : KAX_BUTOS 0.44 0.69 2 37 25 60 36 0 0 60 B8XH38 Potassium channel toxin-like Tx677 OS=Buthus occitanus israelis PE=2 SV=1
74 : KAX_ISOMC 0.44 0.64 1 36 24 59 36 0 0 60 P0CJ24 Potassium channel toxin ImKTx88 OS=Isometrus maculatus PE=2 SV=1
75 : T1DPB5_9SCOR 0.44 0.61 1 35 19 54 36 1 1 61 T1DPB5 CSab-Lyc-16 OS=Lychas buchari PE=4 SV=1
76 : B8XH44_BUTOS 0.43 0.62 1 37 25 61 37 0 0 73 B8XH44 Putative potassium channel toxin Tx771 OS=Buthus occitanus israelis PE=3 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A V 0 0 91 26 12 VVVVV I I VV VV I V VVV V VVV I V
2 2 A F E -A 34 0A 108 55 75 FFFFFFF F I FF FIPPIIIP IIVIFT SFPPG FF REV FF F SLLLLLFGLF
3 3 A I E -A 33 0A 29 63 34 IIIIIII IVIII II TTIIIIIIIIIIIIIITIITIIII IT III TT T IIIIIITIIT
4 4 A N + 0 0 118 71 41 NNNNNDN NDNNN NDDDDDNNNNNNNNNLNNNDNPNDNNN DDEPNGDDDDNN D NN NDDDDDDPEN
5 5 A A S S- 0 0 23 75 40 AAVVVVVIVMVVVIVVVVVVVVVVEVVVVVVVVVVVKVVVV VVIVVQLLLLVVAIAVV HVVVVVVVVV
6 6 A K - 0 0 171 77 51 KKKKKKKSKRKKKSKKKKKKKKKKKKKKKKKKKKKKKDSPKKSKKSKRAAEASSSKSPSRRKKKKKDSKS
7 7 A a - 0 0 14 77 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A R + 0 0 217 76 81 RRRRTTTVSKSTRVTTRTTTSTRRFTKRKTTTTTTKSTTTK.STRKTYGGGGSSRSRNSSGIFFSSSKFT
9 9 A G >> - 0 0 15 77 70 GGGGGTSGSSGGGGSSGGGSLSGGASIGHGSSSASHNVGGHQVAYHGRAAAAAATSTNAGGSAAAAVHAT
10 10 A S H >> S+ 0 0 73 77 32 SSSSSSPSPSSSSSPPSSSPPPSSTPSSSSPPPSPSTSSSSGSSPSSSSSSSSSPSPSSSSSSSSSSSSS
11 11 A P H 34 S+ 0 0 87 77 67 PPPKKKKKQKPPPPKKPKKKQKRRSKRRGQKKKKQGSKPPGGKKAGHPRRRRSSKSKRSKSQSSRRKGSK
12 12 A E H <> S+ 0 0 115 77 40 EEEEQEQEQEQQQEQQQQQQQQDDQQQDQQQQQQQQQEQQQSEQDQQDEEEEQQDSDPQQEEEEEEEQEE
13 13 A b H S+ 0 0 71 77 77 PPPPPPPPKVKKQPPPQPPPRLDDTPEDKKKKKPRQKAKKKSAPIKKSDDDDPPDEDPPGKITIVVSKTS
16 16 A K H X S+ 0 0 53 77 61 KKKAAPAKPKPPPKPPPVVPPPPPPPPPPPPPPVPPTPPPPVPVMPPAPPPPVVPPPVVPPAAAAAVPAV
17 17 A c H >X>S+ 0 0 0 77 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A K H 3<5S+ 0 0 122 76 44 KKKKKKK.KKKKRRKKKKKKKKKKKKKKKKKKKKKKEKKKKRKNRKKKFFFFKKRRRIEKAKKKKKKKKQ
19 19 A E H 3<5S+ 0 0 126 77 63 EQEAAAEKAQDDDAAEDQQADEKKKEKKDDEDDQDDKADDDRAQKDDKKKKKKKKGKRKQRKKKKKDDKR
20 20 A A H <<5S- 0 0 47 77 72 AAAAAAKAAAAAAQQIAMMQRIAAAIAAAALLLMRAVAAAAVAMVAALAAAALLEVEELQAVVVVVLAVL
21 21 A I T <5S- 0 0 75 77 88 IIIVVTFQFTGGGGFYGFFFFYGGIYGGGGYYYFFGVFGGGIVFTGGVFFFFFFTTTVFTTTTTTTFGTH
22 22 A G S +B 32 0A 96 77 42 MMMMMMMMIMMIMMMMMMMMIMIIMMMIMMMMMMIMMMMMIIMMMMITMMMMMMMMMSMMIQQQQQMMQM
30 30 A N T 3 S- 0 0 147 77 5 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNNNGNNNNNNNNNNNNNNNNNNNNNNNGNNN
31 31 A G T 3 S+ 0 0 41 77 63 GGGGGKGKGRRGGRGGGGGGGGSSGGGSGGGGGGGGGKRRGGKGGGRGNNNNSSRGRGSKGRNNNNKRNK
32 32 A K E < S- B 0 29A 100 77 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKRKKKKKKKRKKKVSQQQQQKKQK
33 33 A b E -AB 3 28A 0 77 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A K E +AB 2 27A 50 77 69 KKKKKKKKKKHHHKKKHRRKKKHHKHHHDHKKKRKNIKHHDVRRTDHDRRRRRRKTKLRKVRRRRRRDRR
35 35 A c E - B 0 26A 0 76 0 CCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
36 36 A Y 0 0 160 69 49 YYYYY YYYTTTYY TYYYYYTTY TTTTYYYYYTYYTTTYYYYTT YYYYYY Y YYYYYYYYYYTYY
37 37 A P 0 0 142 49 44 PPPP PPPPP P PSSPP PP PPPP SPPP PPPP S PP TTTTSS PSGG P S
## ALIGNMENTS 71 - 76
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A V 0 0 91 26 12 III
2 2 A F E -A 34 0A 108 55 75 FFIYRD
3 3 A I E -A 33 0A 29 63 34 TTLTII
4 4 A N + 0 0 118 71 41 NDSSNN
5 5 A A S S- 0 0 23 75 40 VVNKAV
6 6 A K - 0 0 171 77 51 SRREPS
7 7 A a - 0 0 14 77 0 CCCCCC
8 8 A R + 0 0 217 76 81 TSNNDR
9 9 A G >> - 0 0 15 77 70 TANGGY
10 10 A S H >> S+ 0 0 73 77 32 SSSSgG
11 11 A P H 34 S+ 0 0 87 77 67 KSSSkS
12 12 A E H <> S+ 0 0 115 77 40 EKEERD
13 13 A b H S+ 0 0 71 77 77 SPPSPE
16 16 A K H X S+ 0 0 53 77 61 VVHHAP
17 17 A c H >X>S+ 0 0 0 77 0 CCCCCC
18 18 A K H 3<5S+ 0 0 122 76 44 EKIERK
19 19 A E H 3<5S+ 0 0 126 77 63 KKRGER
20 20 A A H <<5S- 0 0 47 77 72 LLIIKL
21 21 A I T <5S- 0 0 75 77 88 YFFTRK
22 22 A G S +B 32 0A 96 77 42 MKIIII
30 30 A N T 3 S- 0 0 147 77 5 NNNNNN
31 31 A G T 3 S+ 0 0 41 77 63 KSRKGG
32 32 A K E < S- B 0 29A 100 77 23 KKKKQK
33 33 A b E -AB 3 28A 0 77 0 CCCCCC
34 34 A K E +AB 2 27A 50 77 69 RRYYTT
35 35 A c E - B 0 26A 0 76 0 CCCCCC
36 36 A Y 0 0 160 69 49 YYYY Y
37 37 A P 0 0 142 49 44 SSP P
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 73 0 27 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0.582 19 0.87
2 2 A 4 11 16 0 42 0 2 4 0 9 4 2 0 0 4 0 0 2 0 2 55 0 0 1.894 63 0.24
3 3 A 2 2 76 0 0 0 0 0 0 0 0 21 0 0 0 0 0 0 0 0 63 0 0 0.664 22 0.65
4 4 A 0 1 0 0 0 0 0 1 0 4 3 0 0 0 0 0 0 3 55 32 71 0 0 1.149 38 0.58
5 5 A 72 5 5 1 0 0 0 0 8 0 0 0 0 1 0 3 1 1 1 0 75 0 0 1.136 37 0.59
6 6 A 0 0 0 0 0 0 0 0 4 4 18 0 0 0 8 61 0 3 0 3 77 0 0 1.253 41 0.48
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 77 1 0 0.000 0 1.00
8 8 A 3 0 1 0 5 0 1 7 0 0 18 32 0 0 18 9 0 0 4 1 76 0 0 1.935 64 0.18
9 9 A 4 1 1 0 0 0 3 32 21 0 18 6 0 6 1 0 1 0 4 0 77 0 0 1.930 64 0.29
10 10 A 0 0 0 0 0 0 0 4 0 19 74 3 0 0 0 0 0 0 0 0 77 0 1 0.763 25 0.68
11 11 A 0 0 0 0 0 0 0 8 1 16 18 0 0 1 14 35 6 0 0 0 77 0 0 1.734 57 0.32
12 12 A 0 0 0 0 0 0 0 0 0 1 3 0 0 0 1 1 48 35 0 10 77 0 0 1.219 40 0.60
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 77 0 0 0.000 0 1.00
14 14 A 1 39 10 0 0 27 12 0 5 1 1 0 0 1 1 0 0 0 0 0 77 0 0 1.643 54 0.32
15 15 A 4 1 4 0 0 0 0 1 3 32 8 4 0 0 3 21 4 4 0 12 77 0 0 2.076 69 0.22
16 16 A 17 0 0 1 0 0 0 0 14 55 0 1 0 3 0 9 0 0 0 0 77 0 0 1.335 44 0.39
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 77 1 0 0.000 0 1.00
18 18 A 0 0 3 0 5 0 0 0 1 0 0 0 0 0 11 72 1 5 1 0 76 0 0 1.048 34 0.55
19 19 A 0 0 0 0 0 0 0 3 12 0 0 0 0 0 8 34 9 12 0 23 77 0 0 1.720 57 0.36
20 20 A 13 16 6 5 0 0 0 0 45 0 0 0 0 0 3 3 5 4 0 0 77 0 0 1.714 57 0.28
21 21 A 8 0 8 0 27 0 9 23 0 0 0 19 0 1 1 1 1 0 0 0 77 0 0 1.854 61 0.12
22 22 A 0 0 0 22 0 0 0 70 0 0 0 0 4 0 0 0 0 0 4 0 77 18 11 0.835 27 0.44
23 23 A 7 3 0 0 0 0 2 0 0 0 16 14 7 12 16 22 0 0 2 0 58 0 0 2.067 68 0.13
24 24 A 1 4 0 0 1 0 6 5 35 9 4 1 0 0 25 4 0 0 0 4 77 0 0 1.937 64 0.13
25 25 A 0 0 0 0 22 0 1 14 16 1 4 1 0 8 10 1 8 3 10 0 77 0 0 2.216 73 0.02
26 26 A 0 0 0 0 0 0 0 82 12 0 5 0 0 1 0 0 0 0 0 0 77 0 0 0.625 20 0.79
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 77 0 0 0.000 0 1.00
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 77 0 0 0.000 0 1.00
29 29 A 0 0 19 69 0 0 0 0 0 0 1 1 0 0 0 1 8 0 0 0 77 0 0 0.944 31 0.58
30 30 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 96 0 77 0 0 0.165 5 0.94
31 31 A 0 0 0 0 0 0 0 53 0 0 9 0 0 0 14 12 0 0 12 0 77 0 0 1.333 44 0.37
32 32 A 1 0 0 0 0 0 0 0 0 0 1 0 0 0 4 84 9 0 0 0 77 0 0 0.600 20 0.77
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 77 0 0 0.000 0 1.00
34 34 A 3 1 1 0 0 0 3 0 0 0 0 5 0 17 29 34 0 0 1 6 77 0 0 1.715 57 0.31
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 76 0 0 0.000 0 1.00
36 36 A 0 0 0 0 0 0 75 0 0 0 0 25 0 0 0 0 0 0 0 0 69 0 0 0.558 18 0.51
37 37 A 0 0 0 0 0 0 0 4 0 67 20 8 0 0 0 0 0 0 0 0 49 0 0 0.926 30 0.55
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
9 23 23 1 gIs
15 22 23 1 gQs
16 21 23 1 gRh
20 21 23 1 gIr
21 23 23 1 gQh
22 22 23 1 gIh
26 22 23 1 gRh
31 22 23 1 gSs
32 22 23 1 gPh
33 22 23 1 gPh
35 23 23 1 gQh
75 11 29 1 gIk
//