Complet list of 1hly hssp file
Complete list of 1hly.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1HLY
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-30
HEADER TOXIN 04-DEC-00 1HLY
COMPND MOL_ID: 1; MOLECULE: HONGOTOXIN 1; CHAIN: A; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: CENTRUROIDES LIMBATUS; ORGANISM_TAXID:
AUTHOR B.PRAGL,A.KOSCHAK,M.TRIEB,G.OBERMAIR,W.A.KAUFMANN,U.GERSTER, E.BLANC,C
DBREF 1HLY A 1 39 UNP P59847 SCK1_CENLM 1 39
SEQLENGTH 39
NCHAIN 1 chain(s) in 1HLY data set
NALIGN 73
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : KAX25_CENLM 1.00 1.00 1 39 1 39 39 0 0 39 P59847 Potassium channel toxin alpha-KTx 2.5 OS=Centruroides limbatus PE=1 SV=1
2 : KAX22_CENMA 0.90 0.95 1 39 1 39 39 0 0 39 P40755 Potassium channel toxin alpha-KTx 2.2 OS=Centruroides margaritatus PE=1 SV=1
3 : KAX27_CENLL 0.86 0.92 1 36 1 36 36 0 0 36 P45630 Potassium channel toxin alpha-KTx 2.7 (Fragment) OS=Centruroides limpidus limpidus PE=1 SV=1
4 : KAX2B_CENEL 0.81 0.92 1 37 1 37 37 0 0 39 P0C164 Potassium channel toxin alpha-KTx 2.11 OS=Centruroides elegans PE=1 SV=1
5 : KAX2C_CENEL 0.78 0.89 1 36 1 36 36 0 0 39 P0C165 Potassium channel toxin alpha-KTx 2.12 OS=Centruroides elegans PE=1 SV=1
6 : KAX2D_CENSU 0.78 0.92 3 38 3 38 36 0 0 38 P85529 Potassium channel toxin alpha-KTx 2.13 OS=Centruroides suffusus suffusus PE=1 SV=1
7 : KAX26_CENLM 0.77 0.86 1 35 1 34 35 1 1 34 P59849 Potassium channel toxin alpha-KTx 2.6 (Fragment) OS=Centruroides limbatus PE=1 SV=1
8 : KAX28_CENEL 0.77 0.87 1 39 1 39 39 0 0 39 P0C161 Potassium channel toxin alpha-KTx 2.8 OS=Centruroides elegans PE=1 SV=1
9 : KAX23_CENLL 0.75 0.92 3 38 3 38 36 0 0 38 P45629 Potassium channel toxin alpha-KTx 2.3 OS=Centruroides limpidus limpidus PE=1 SV=1
10 : KAX29_CENEL 0.74 0.87 1 39 1 39 39 0 0 39 P0C162 Potassium channel toxin alpha-KTx 2.9 OS=Centruroides elegans PE=1 SV=1
11 : KAX21_CENNO 0.72 0.82 1 39 1 39 39 0 0 39 P08815 Potassium channel toxin alpha-KTx 2.1 OS=Centruroides noxius PE=1 SV=3
12 : KAX43_TITDI 0.69 0.83 2 37 2 36 36 1 1 37 P59925 Potassium channel toxin alpha-KTx 4.3 OS=Tityus discrepans PE=1 SV=1
13 : KAX2A_CENEL 0.68 0.86 2 38 2 38 37 0 0 38 P0C163 Potassium channel toxin alpha-KTx 2.10 OS=Centruroides elegans PE=1 SV=1
14 : KAX19_CENLM 0.66 0.83 2 36 2 35 35 1 1 36 P59848 Potassium channel toxin alpha-KTx 1.9 (Fragment) OS=Centruroides limbatus PE=1 SV=1
15 : KAX44_TITOB 0.65 0.86 2 38 2 37 37 1 1 37 P60210 Potassium channel toxin alpha-KTx 4.4 OS=Tityus obscurus PE=1 SV=1
16 : A0RZD1_MESMA 0.59 0.78 2 38 22 57 37 1 1 57 A0RZD1 Potassium-channel toxin protein OS=Mesobuthus martensii GN=TX1 PE=3 SV=1
17 : KAX15_MESMA 0.59 0.78 2 38 22 57 37 1 1 57 Q9NII6 Potassium channel toxin alpha-KTx 1.5 OS=Mesobuthus martensii PE=1 SV=1
18 : KAX1B_CENNO 0.59 0.73 1 37 1 36 37 1 1 37 P0C182 Potassium channel toxin alpha-KTx 1.11 OS=Centruroides noxius PE=1 SV=1
19 : V9LLY8_MESMA 0.59 0.78 2 38 22 57 37 1 1 57 V9LLY8 Toxin BmTX4 OS=Mesobuthus martensii PE=3 SV=1
20 : KAX71_PANIM 0.58 0.73 7 39 16 47 33 1 1 47 P55927 Potassium channel toxin alpha-KTx 7.1 (Fragment) OS=Pandinus imperator GN=PTX-1 PE=1 SV=2
21 : KAX1F_MESMA 0.57 0.78 2 38 22 57 37 1 1 57 H2ER23 Potassium channel toxin alpha-KTx 1.15 OS=Mesobuthus martensii PE=2 SV=1
22 : KAX41_TITSE 0.57 0.78 2 38 2 37 37 1 1 37 P46114 Potassium channel toxin alpha-KTx 4.1 OS=Tityus serrulatus PE=1 SV=1
23 : KAX45_TITCO 0.57 0.81 2 38 24 59 37 1 1 59 Q5G8B6 Potassium channel toxin alpha-KTx 4.5 OS=Tityus costatus PE=1 SV=1
24 : KAX46_TITST 0.57 0.78 2 38 2 37 37 1 1 37 P0CB56 Potassium channel toxin alpha-KTx 4.6 OS=Tityus stigmurus PE=1 SV=1
25 : KA232_VAEMS 0.55 0.73 5 37 4 34 33 1 2 35 P0DJ32 Potassium channel toxin alpha-KTx 23.2 OS=Vaejovis mexicanus smithi PE=1 SV=1
26 : KAX1A_PARTR 0.54 0.76 3 39 2 37 37 1 1 37 P83112 Potassium channel toxin alpha-KTx 1.10 OS=Parabuthus transvaalicus PE=1 SV=1
27 : B8XH48_BUTOS 0.53 0.66 2 39 26 61 38 1 2 61 B8XH48 Putative potassium channel toxin Tx821 OS=Buthus occitanus israelis PE=3 SV=1
28 : I6NWV2_HETLA 0.53 0.68 5 38 27 59 34 1 1 61 I6NWV2 Kv1.3 potassium channel blocker (Precursor) OS=Heterometrus laoticus GN=Tx3 PE=3 SV=1
29 : KA125_LYCMC 0.53 0.74 4 37 27 59 34 1 1 60 P0CH12 Potassium channel toxin alpha-KTx 12.5 OS=Lychas mucronatus PE=2 SV=1
30 : KAX24_CENNO 0.53 0.66 1 38 1 37 38 1 1 38 Q9TXD1 Potassium channel toxin alpha-KTx 2.4 OS=Centruroides noxius PE=1 SV=1
31 : KA127_LYCMC 0.52 0.64 5 37 28 59 33 1 1 60 P0CI48 Neurotoxin alpha-KTx 12.7 OS=Lychas mucronatus PE=2 SV=1
32 : KA159_LYCMC 0.52 0.64 6 38 29 60 33 1 1 60 D9U2A8 Potassium channel toxin alpha-KTx 15.9 OS=Lychas mucronatus PE=2 SV=1
33 : KAX68_OPICA 0.52 0.68 6 36 28 57 31 1 1 61 Q6XLL7 Potassium channel toxin alpha-KTx 6.8 OS=Opistophthalmus carinatus PE=2 SV=1
34 : KAX6A_OPICA 0.52 0.70 6 38 27 58 33 1 1 60 Q6XLL5 Potassium channel toxin alpha-KTx 6.10 OS=Opistophthalmus carinatus PE=2 SV=1
35 : K7XFK5_MESGB 0.51 0.59 3 39 26 60 37 1 2 60 K7XFK5 Toxin alpha-KTx3.16 OS=Mesobuthus gibbosus GN=Tx4 PE=3 SV=1
36 : KA126_LYCMC 0.51 0.60 4 38 27 60 35 1 1 65 P0CI47 Neurotoxin alpha-KTx 12.6 OS=Lychas mucronatus PE=2 SV=1
37 : KAX34_LEIQH 0.51 0.65 3 39 4 38 37 1 2 38 P46110 Potassium channel toxin alpha-KTx 3.4 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
38 : KAX72_PANIM 0.51 0.69 5 39 2 35 35 1 1 35 P55928 Potassium channel toxin alpha-KTx 7.2 OS=Pandinus imperator PE=1 SV=1
39 : KAX14_CENLM 0.50 0.67 2 37 2 36 36 1 1 37 P0C167 Potassium channel toxin alpha-KTx 1.4 OS=Centruroides limbatus PE=1 SV=1
40 : KAX37_ORTSC 0.50 0.63 2 39 3 38 38 1 2 38 P55896 Potassium channel toxin alpha-KTx 3.7 OS=Orthochirus scrobiculosus PE=1 SV=1
41 : KAX62_SCOMA 0.50 0.71 5 38 1 33 34 1 1 34 P80719 Potassium channel toxin alpha-KTx 6.2 OS=Scorpio maurus palmatus PE=1 SV=1
42 : KAX6F_HEMLE 0.50 0.71 5 38 1 33 34 1 1 35 P85528 Potassium channel toxin alpha-KTx 6.15 OS=Hemiscorpius lepturus PE=1 SV=1
43 : KA121_TITSE 0.49 0.70 1 37 4 39 37 1 1 40 P59936 Potassium channel toxin alpha-KTx 12.1 OS=Tityus serrulatus PE=1 SV=2
44 : KA122_TITTR 0.49 0.70 1 37 4 39 37 1 1 40 P0C168 Potassium channel toxin alpha-KTx 12.2 OS=Tityus trivittatus PE=1 SV=1
45 : KA123_TITCO 0.49 0.70 1 37 4 39 37 1 1 40 P0C185 Potassium channel toxin alpha-KTx 12.3 OS=Tityus costatus PE=1 SV=1
46 : KA124_TITST 0.49 0.70 1 37 4 39 37 1 1 40 P0C8L1 Potassium channel toxin alpha-KTx 12.4 OS=Tityus stigmurus PE=1 SV=1
47 : KAX31_ANDMA 0.49 0.62 3 39 4 38 37 1 2 38 P24662 Potassium channel toxin alpha-KTx 3.1 OS=Androctonus mauretanicus mauretanicus PE=1 SV=2
48 : KAX35_ANDAU 0.49 0.54 3 39 25 59 37 1 2 59 P45696 Potassium channel toxin alpha-KTx 3.5 OS=Androctonus australis GN=KTX2 PE=1 SV=1
49 : KAX36_MESMA 0.49 0.59 3 39 25 59 37 1 2 60 Q9NII7 Potassium channel toxin alpha-KTx 3.6 OS=Mesobuthus martensii PE=1 SV=1
50 : KAX3B_ODODO 0.49 0.60 5 39 6 38 35 1 2 38 P0C909 Potassium channel toxin alpha-KTx 3.11 OS=Odontobuthus doriae PE=1 SV=1
51 : KAX3D_MESEU 0.49 0.62 3 39 3 37 37 1 2 37 P86396 Potassium channel toxin alpha-KTx 3.13 OS=Mesobuthus eupeus PE=1 SV=1
52 : I6NXS5_HETLA 0.48 0.68 6 36 2 31 31 1 1 35 I6NXS5 Kv1.3 potassium channel blocker (Fragment) OS=Heterometrus laoticus GN=Tx2 PE=2 SV=1
53 : KAX63_HETSP 0.48 0.68 6 36 2 31 31 1 1 34 P59867 Potassium channel toxin alpha-KTx 6.3 OS=Heterometrus spinifer PE=1 SV=1
54 : KAX66_OPICA 0.48 0.68 6 36 28 57 31 1 1 61 Q6XLL9 Potassium channel toxin alpha-KTx 6.6 OS=Opistophthalmus carinatus PE=2 SV=1
55 : KAX67_OPICA 0.48 0.68 6 36 28 57 31 1 1 61 Q6XLL8 Potassium channel toxin alpha-KTx 6.7 OS=Opistophthalmus carinatus PE=2 SV=1
56 : KAX6E_HADGE 0.48 0.61 4 36 2 32 33 1 2 36 P84864 Potassium channel toxin alpha-KTx 6.14 OS=Hadrurus gertschi PE=1 SV=1
57 : KAX16_MESMA 0.46 0.68 2 38 23 58 37 1 1 58 Q9NII5 Potassium channel toxin alpha-KTx 1.6 OS=Mesobuthus martensii PE=1 SV=1
58 : KAX32_LEIQH 0.46 0.59 3 39 4 38 37 1 2 38 P46111 Potassium channel toxin alpha-KTx 3.2 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
59 : KAX33_LEIQH 0.46 0.59 3 39 4 38 37 1 2 38 P46112 Potassium channel toxin alpha-KTx 3.3 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
60 : KAX38_HOTTS 0.46 0.65 3 39 4 38 37 1 2 38 P59886 Potassium channel toxin alpha-KTx 3.8 OS=Hottentotta tamulus sindicus PE=1 SV=1
61 : KAX3C_ANDAM 0.46 0.62 3 39 4 38 37 1 2 38 P0C8R1 Potassium channel toxin alpha-KTx 3.12 OS=Androctonus amoreuxi PE=1 SV=1
62 : KAX_BUTOS 0.46 0.68 2 38 25 60 37 1 1 60 B8XH38 Potassium channel toxin-like Tx677 OS=Buthus occitanus israelis PE=2 SV=1
63 : Q1EFP8_MESMA 0.46 0.68 2 38 23 58 37 1 1 58 Q1EFP8 Potassium channel toxin BmKTX2' OS=Mesobuthus martensii PE=3 SV=1
64 : T1DMS1_9SCOR 0.46 0.66 2 36 22 55 35 1 1 66 T1DMS1 CSab-Iso-8 OS=Isometroides vescus PE=3 SV=1
65 : B8XH28_BUTOS 0.44 0.67 3 38 26 59 36 1 2 59 B8XH28 Putative potassium channel toxin Tx1 (Precursor) OS=Buthus occitanus israelis PE=3 SV=1
66 : B8XH29_BUTOS 0.44 0.67 3 38 26 59 36 1 2 60 B8XH29 Putative potassium channel toxin Tx260 OS=Buthus occitanus israelis PE=3 SV=1
67 : B8XH44_BUTOS 0.44 0.61 3 38 27 61 36 1 1 73 B8XH44 Putative potassium channel toxin Tx771 OS=Buthus occitanus israelis PE=3 SV=1
68 : KA161_MESTA 0.44 0.67 2 37 2 36 36 1 1 36 P0C173 Potassium channel toxin alpha-KTx 16.1 OS=Mesobuthus tamulus PE=1 SV=1
69 : KAX3A_BUTOS 0.44 0.67 3 38 26 59 36 1 2 59 P0C908 Potassium channel toxin alpha-KTx 3.10 OS=Buthus occitanus israelis PE=1 SV=1
70 : KAX13_MESTA 0.43 0.62 2 38 2 37 37 1 1 37 P24663 Potassium channel toxin alpha-KTx 1.3 OS=Mesobuthus tamulus PE=1 SV=2
71 : KAX1E_MESMA 0.43 0.68 2 38 24 59 37 1 1 59 H2ETQ6 Potassium channel toxin alpha-KTx 1.14 OS=Mesobuthus martensii PE=2 SV=1
72 : KAX1X_MESMA 0.43 0.65 2 38 23 58 37 1 1 58 H2ER22 Potassium channel toxin alpha-KTx Kcug1a OS=Mesobuthus martensii PE=2 SV=1
73 : KAX39_BUTOC 0.43 0.51 3 39 3 37 37 1 2 37 P59290 Potassium channel toxin alpha-KTx 3.9 OS=Buthus occitanus tunetanus GN=KTX3 PE=1 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A T 0 0 77 16 0 TTTTT TT TT T T TTTT
2 2 A V - 0 0 92 38 51 VIVII FV IIFFFFFFFF FFFF I I FI CCCC F IFL L F
3 3 A I - 0 0 29 56 36 IIIIIIIIIIIIIIITTIT TIII VI I I I II LLLLIII I TIIIILTIIIIIIT
4 4 A D + 0 0 84 59 41 DNDNNNNNNNNNNDNDDDD DNNN DL DN PDN DN DDDDNPN N GNNNNNSNDNNNDND
5 5 A V - 0 0 33 66 27 VVVVVVVVVVVVVVVVVVV VAVAIMVIIEI VVVIVVVILLLLVVVVV TVVVVVNVVVVVVVV
6 6 A K B -A 33 0A 129 73 49 KKKKKKKKKKKKKKKKKDK KKKKSRKSKKKKKRKKKSSKSKAAEAKSKKKSSKKSSSPKKRSNKKSKKD
7 7 A a + 0 0 17 74 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A T S S- 0 0 105 74 75 TTTTTSTTTTTTSTRTTTTTTRRRVKTTSFRSRSKVTTSKTTGGGGSKKRKRRRRISTTRTNSVRRRIRS
9 9 A S S S- 0 0 36 74 74 SSSSSSSSSSSGLTGGGVANAGGGGSGGSAYNTGHRGNVIGLAAAAGHHGHTTTTSAGGGGNANGGYSGV
10 10 A P S >> S+ 0 0 70 74 44 PPPPPPPPPPPSPSSSSSSPSSSSSSSSSTPTPSSLSESSSSSSSSSSSSSPPPPPSSSSSSSVSSGSSS
11 11 A K G >4 S+ 0 0 126 74 64 KKKKKQKKQKKKQKKKKKKKKPPPKKQKSSASKKGEPKKRKKRRRRPGGPGKKKKKSPPPHSSNRRSQRK
12 12 A Q G 34 S+ 0 0 78 74 38 QQQQQQQQQQQQQEEQQEQQQEEEEEQQSQDQDQQTQQEQDDEEEEQQQQQDDDDQQQQQQEQTDDDEDE
13 13 A b G <> S+ 0 0 0 74 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 14 A L H >>S+ 0 0 32 74 48 PPPPPPAPPPPAPPAVVPVHVKKKKKPPPPMTPPPPPHPPPPPPPPPPPPPPPPPPVPPPPHVPPPPAPV
17 17 A c I 3X>S+ 0 0 0 74 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A K I 3<5S+ 0 0 103 73 37 KKKKKKKKKKKKKKKKKKKKNKKKKKKKRKRERKKKKKKKRKFFFFKKKK.RRRRRKKKRKIKKKKKKKK
19 19 A A I <45S- 0 0 73 73 63 AAEEEAEDDDEADAAQQAQKQEEQAQDRGKKKKQDKDKAKKKKKKKDDDD.KKKKAKDDDDRKQKKRKKD
20 20 A Q I <5S+ 0 0 133 74 77 QQIIIAKLRLLARAAMMAMEMAAAQAAKVAVVQQAQAEAAQEAAAAAAAAKEEQQKLAAAAILRAALVAL
21 21 A F I < S+B 33 0A 124 74 23 MMMMMIMMIMMMIMMMMMMMMMMMMMMMMMMMMMMMIMMMIIMMMMMMIMMMMMMMMMMMIIMMIIIQIM
31 31 A N T 3 S- 0 0 123 74 6 NNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
32 32 A G T 3 S+ 0 0 41 74 66 GGGGGGGGGGGGGKGGGKGRGGGGKRGKGGGGKKGGGRKGKRNNNNRGGGGRRRRRSRRGRRSGSSGRSK
33 33 A K E < S-AB 6 30A 66 74 20 KKKKKKKKKKKKKKKKKKKKKKKKKKKSRKKKTVKKKKKKSNKKKKKKKKKKKTTKKKKKKKKKKKKQKK
34 34 A b E - B 0 29A 0 74 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
35 35 A K E - B 0 28A 56 74 63 KKKKHKKKKKKKKKKRRKRKRKKKKKHKTKTIRKNVHKRHKKRRRRHDDHDKKRRHRHHHHYRMHHTRHR
36 36 A c E - B 0 27A 2 73 0 CCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A Y E - B 0 26A 131 63 56 YY Y Y YYYYYY YYYYYFYYYYYYTYYYYY YTSTFYTYYYYYYTTTTT YTTTTYY TTYYTY
38 38 A P 0 0 65 51 51 PP P NPNN P PSS SGSPPP PPG N P GPPPG PGG PPPPP SPPPPPS PPP PQ
39 39 A H 0 0 136 23 59 HH N NN R RK K KR K KKKKK KKQK
## ALIGNMENTS 71 - 73
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A T 0 0 77 16 0
2 2 A V - 0 0 92 38 51 FF
3 3 A I - 0 0 29 56 36 TTI
4 4 A D + 0 0 84 59 41 DNP
5 5 A V - 0 0 33 66 27 VVV
6 6 A K B -A 33 0A 129 73 49 RSS
7 7 A a + 0 0 17 74 0 CCC
8 8 A T S S- 0 0 105 74 75 SSK
9 9 A S S S- 0 0 36 74 74 AAH
10 10 A P S >> S+ 0 0 70 74 44 SSS
11 11 A K G >4 S+ 0 0 126 74 64 SSG
12 12 A Q G 34 S+ 0 0 78 74 38 KQQ
13 13 A b G <> S+ 0 0 0 74 0 CCC
14 14 A L H >>S+ 0 0 32 74 48 VVP
17 17 A c I 3X>S+ 0 0 0 74 0 CCC
18 18 A K I 3<5S+ 0 0 103 73 37 KEK
19 19 A A I <45S- 0 0 73 73 63 KKD
20 20 A Q I <5S+ 0 0 133 74 77 LLA
21 21 A F I < S+B 33 0A 124 74 23 KMM
31 31 A N T 3 S- 0 0 123 74 6 NNN
32 32 A G T 3 S+ 0 0 41 74 66 SSR
33 33 A K E < S-AB 6 30A 66 74 20 KKK
34 34 A b E - B 0 29A 0 74 0 CCC
35 35 A K E - B 0 28A 56 74 63 RRD
36 36 A c E - B 0 27A 2 73 0 CCC
37 37 A Y E - B 0 26A 131 63 56 YYT
38 38 A P 0 0 65 51 51 SSP
39 39 A H 0 0 136 23 59 K
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 16 0 0 0.000 0 1.00
2 2 A 11 5 24 0 50 0 0 0 0 0 0 0 11 0 0 0 0 0 0 0 38 0 0 1.317 43 0.49
3 3 A 2 9 73 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 56 0 0 0.810 27 0.64
4 4 A 0 2 0 0 0 0 0 2 0 5 2 0 0 0 0 0 0 0 54 36 59 0 0 1.058 35 0.58
5 5 A 76 6 9 2 0 0 0 0 3 0 0 2 0 0 0 0 0 2 2 0 66 0 0 0.958 31 0.72
6 6 A 0 0 0 0 0 0 0 0 4 1 21 0 0 0 5 63 0 1 1 3 73 0 0 1.181 39 0.51
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
8 8 A 4 0 3 0 1 0 0 5 0 0 16 38 0 0 22 9 0 0 1 0 74 0 0 1.719 57 0.25
9 9 A 4 3 1 0 0 0 3 30 15 0 22 8 0 7 1 0 0 0 7 0 74 0 0 1.984 66 0.26
10 10 A 1 1 0 0 0 0 0 1 0 28 64 3 0 0 0 0 0 1 0 0 74 0 0 0.976 32 0.56
11 11 A 0 0 0 0 0 0 0 7 1 12 12 0 0 1 11 46 7 1 1 0 74 0 0 1.707 56 0.36
12 12 A 0 0 0 0 0 0 0 0 0 0 1 3 0 0 0 1 57 22 0 16 74 0 0 1.162 38 0.62
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
14 14 A 0 41 9 0 0 19 16 0 8 0 1 1 0 1 1 1 0 0 0 0 74 0 0 1.694 56 0.29
15 15 A 1 1 3 0 0 0 0 3 4 32 3 1 0 0 3 20 4 8 0 16 74 0 0 2.012 67 0.25
16 16 A 12 0 0 1 0 0 0 0 5 69 0 1 0 4 0 7 0 0 0 0 74 0 0 1.099 36 0.52
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 1 0 0.000 0 1.00
18 18 A 0 0 1 0 5 0 0 0 0 0 0 0 0 0 14 75 0 3 1 0 73 0 0 0.861 28 0.62
19 19 A 0 0 0 0 0 0 0 1 15 0 0 0 0 0 4 36 11 10 0 23 73 0 0 1.649 55 0.37
20 20 A 5 12 5 5 0 0 0 0 42 0 0 0 0 0 4 5 14 7 0 0 74 0 0 1.834 61 0.23
21 21 A 5 1 5 0 30 0 8 24 0 0 0 22 0 1 0 1 0 0 0 1 74 0 0 1.787 59 0.13
22 22 A 0 0 0 22 0 0 0 70 1 0 0 0 7 0 0 0 0 0 0 0 74 44 0 0.819 27 0.44
23 23 A 10 7 14 0 0 0 0 3 0 7 7 21 3 0 14 3 10 0 0 0 29 0 0 2.243 74 0.11
24 24 A 0 7 0 2 2 0 11 0 5 2 5 0 14 13 18 16 0 0 0 5 56 0 0 2.253 75 0.05
25 25 A 0 0 0 0 0 0 0 0 35 23 1 1 0 0 32 4 1 1 0 0 74 16 0 1.433 47 0.30
26 26 A 0 0 0 0 29 0 2 22 9 0 2 0 0 17 0 0 0 2 17 0 58 1 0 1.722 57 0.04
27 27 A 0 0 0 1 0 0 0 71 22 0 5 0 0 0 0 0 0 0 0 0 73 0 0 0.792 26 0.71
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 74 0 0 0.000 0 1.00
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
30 30 A 0 0 18 80 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 74 0 0 0.602 20 0.77
31 31 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 96 0 74 0 0 0.170 5 0.94
32 32 A 0 0 0 0 0 0 0 51 0 0 9 0 0 0 22 12 0 0 5 0 74 0 0 1.310 43 0.33
33 33 A 1 0 0 0 0 0 0 0 0 0 3 4 0 0 1 88 1 0 1 0 74 0 0 0.574 19 0.79
34 34 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 74 0 0 0.000 0 1.00
35 35 A 1 0 1 1 0 0 1 0 0 0 0 4 0 19 24 41 0 0 1 5 74 0 0 1.603 53 0.37
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
37 37 A 0 0 0 0 3 0 68 0 0 0 2 27 0 0 0 0 0 0 0 0 63 0 0 0.789 26 0.44
38 38 A 0 0 0 0 0 0 0 12 0 63 16 0 0 0 0 0 2 0 8 0 51 0 0 1.112 37 0.48
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 13 13 57 4 0 13 0 23 0 0 1.256 41 0.41
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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