Complet list of 1hd4 hssp file
Complete list of 1hd4.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1HD4
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER GLYCOPROTEIN 07-NOV-00 1HD4
COMPND MOL_ID: 1; MOLECULE: CHORIONIC GONADOTROPIN; CHAIN: A; OTHER_DETAILS:
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR P.J.A.ERBEL,Y.KARIMI-NEJAD,J.A.VAN KUIK,R.BOELENS, J.P.KAMERLING,J.F.G
DBREF 1HD4 A 1 92 UNP P01215 GLHA_HUMAN 25 116
SEQLENGTH 92
NCHAIN 1 chain(s) in 1HD4 data set
NALIGN 204
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : C0KRQ8_HUMAN 1.00 1.00 1 92 1 92 92 0 0 92 C0KRQ8 Follicle-stimulating hormone alpha subunit (Fragment) OS=Homo sapiens GN=CGA PE=2 SV=1
2 : G3SH69_GORGO 1.00 1.00 1 92 26 117 92 0 0 117 G3SH69 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101123865 PE=3 SV=1
3 : GLHA_HUMAN 1.00 1.00 1 92 25 116 92 0 0 116 P01215 Glycoprotein hormones alpha chain OS=Homo sapiens GN=CGA PE=1 SV=1
4 : Q6I9S8_HUMAN 1.00 1.00 1 92 25 116 92 0 0 116 Q6I9S8 CGA protein OS=Homo sapiens GN=CGA PE=2 SV=1
5 : Q96QJ4_HUMAN 0.99 1.00 1 92 25 116 92 0 0 116 Q96QJ4 Glycoprotein hormones, alpha polypeptide OS=Homo sapiens GN=CGA PE=3 SV=1
6 : H2PJR7_PONAB 0.98 0.99 1 92 25 116 92 0 0 116 H2PJR7 Uncharacterized protein OS=Pongo abelii GN=CGA PE=3 SV=1
7 : H2QTD1_PANTR 0.98 0.99 1 92 25 116 92 0 0 116 H2QTD1 Uncharacterized protein OS=Pan troglodytes GN=CGA PE=3 SV=1
8 : G1RR09_NOMLE 0.89 0.98 3 92 43 132 90 0 0 132 G1RR09 Uncharacterized protein OS=Nomascus leucogenys GN=CGA PE=3 SV=2
9 : G7P3J5_MACFA 0.84 0.89 4 91 32 119 88 0 0 120 G7P3J5 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_13817 PE=3 SV=1
10 : GLHA_MACFA 0.84 0.89 4 91 32 119 88 0 0 120 Q9BEH3 Glycoprotein hormones alpha chain OS=Macaca fascicularis GN=CGA PE=2 SV=1
11 : F6XHM5_MACMU 0.83 0.90 4 91 32 119 88 0 0 120 F6XHM5 Glycoprotein hormones alpha chain OS=Macaca mulatta GN=CGA PE=3 SV=1
12 : GLHA_MACMU 0.83 0.90 4 91 32 119 88 0 0 120 P22762 Glycoprotein hormones alpha chain OS=Macaca mulatta GN=CGA PE=3 SV=1
13 : D2HQH0_AILME 0.78 0.87 7 92 1 86 86 0 0 86 D2HQH0 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_014143 PE=3 SV=1
14 : F6ZK92_CALJA 0.77 0.88 2 91 26 115 90 0 0 116 F6ZK92 Glycoprotein hormones alpha chain OS=Callithrix jacchus GN=CGA PE=3 SV=1
15 : G3VYZ8_SARHA 0.77 0.88 5 92 33 120 88 0 0 120 G3VYZ8 Uncharacterized protein OS=Sarcophilus harrisii GN=CGA PE=3 SV=1
16 : GLHA_CALJA 0.77 0.88 6 91 34 119 86 0 0 120 P51499 Glycoprotein hormones alpha chain OS=Callithrix jacchus GN=CGA PE=2 SV=1
17 : GLHA_MACRU 0.77 0.88 5 92 33 120 88 0 0 120 P68267 Glycoprotein hormones alpha chain OS=Macropus rufus GN=CGA PE=2 SV=1
18 : GLHA_MERUN 0.77 0.88 5 92 33 120 88 0 0 120 Q9ERJ6 Glycoprotein hormones alpha chain OS=Meriones unguiculatus GN=CGA PE=2 SV=1
19 : GLHA_MONDO 0.77 0.88 5 92 33 120 88 0 0 120 Q6YNX4 Glycoprotein hormones alpha chain OS=Monodelphis domestica GN=CGA PE=2 SV=1
20 : GLHA_RAT 0.77 0.88 5 92 33 120 88 0 0 120 P11962 Glycoprotein hormones alpha chain OS=Rattus norvegicus GN=Cga PE=2 SV=1
21 : GLHA_TRIVU 0.77 0.88 5 92 33 120 88 0 0 120 P68268 Glycoprotein hormones alpha chain OS=Trichosurus vulpecula GN=CGA PE=2 SV=1
22 : L5JL68_PTEAL 0.77 0.88 5 92 33 120 88 0 0 120 L5JL68 Glycoprotein hormones alpha chain OS=Pteropus alecto GN=PAL_GLEAN10025193 PE=3 SV=1
23 : Q6P509_RAT 0.77 0.88 5 92 33 120 88 0 0 120 Q6P509 Cga protein OS=Rattus norvegicus GN=Cga PE=2 SV=1
24 : F1Q3Q8_CANFA 0.76 0.88 4 92 32 120 89 0 0 120 F1Q3Q8 Glycoprotein hormones alpha chain OS=Canis familiaris GN=CGA PE=3 SV=1
25 : G1LYF7_AILME 0.76 0.88 4 92 33 121 89 0 0 121 G1LYF7 Glycoprotein hormones alpha chain (Fragment) OS=Ailuropoda melanoleuca GN=CGA PE=3 SV=1
26 : G3U2R3_LOXAF 0.76 0.88 4 92 33 121 89 0 0 121 G3U2R3 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=CGA PE=3 SV=1
27 : GLHA_AILFU 0.76 0.89 4 92 32 120 89 0 0 120 Q8HZS0 Glycoprotein hormones alpha chain OS=Ailurus fulgens GN=CGA PE=2 SV=1
28 : GLHA_CANFA 0.76 0.88 4 92 32 120 89 0 0 120 Q9XSW8 Glycoprotein hormones alpha chain OS=Canis familiaris GN=CGA PE=2 SV=1
29 : GLHA_MASCO 0.76 0.88 5 92 33 120 88 0 0 120 Q9ERG4 Glycoprotein hormones alpha chain OS=Mastomys coucha GN=CGA PE=2 SV=1
30 : GLHA_MOUSE 0.76 0.88 5 92 33 120 88 0 0 120 P01216 Glycoprotein hormones alpha chain OS=Mus musculus GN=Cga PE=2 SV=1
31 : GLHA_RABIT 0.76 0.88 4 92 32 120 89 0 0 120 P07474 Glycoprotein hormones alpha chain OS=Oryctolagus cuniculus GN=CGA PE=1 SV=2
32 : GLHA_SAIBB 0.76 0.87 6 91 34 119 86 0 0 120 Q3YC03 Glycoprotein hormones alpha chain OS=Saimiri boliviensis boliviensis GN=CGA PE=2 SV=1
33 : H0WWX4_OTOGA 0.76 0.88 4 92 32 120 89 0 0 120 H0WWX4 Uncharacterized protein OS=Otolemur garnettii GN=CGA PE=3 SV=1
34 : I3N612_SPETR 0.76 0.88 4 92 32 120 89 0 0 120 I3N612 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=CGA PE=3 SV=1
35 : M3X8R3_FELCA 0.76 0.88 4 92 32 120 89 0 0 120 M3X8R3 Glycoprotein hormones alpha chain OS=Felis catus GN=CGA PE=3 SV=1
36 : M3YDW3_MUSPF 0.76 0.88 4 92 32 120 89 0 0 120 M3YDW3 Uncharacterized protein OS=Mustela putorius furo GN=CGA PE=3 SV=1
37 : Q2L4U1_CRIGR 0.76 0.88 5 92 33 120 88 0 0 120 Q2L4U1 Glycoprotein hormones alpha subunit protein OS=Cricetulus griseus GN=CGA PE=2 SV=1
38 : Q3MU80_CRIMI 0.76 0.88 5 92 33 120 88 0 0 120 Q3MU80 Glycoprotein hormone alpha subunit protein OS=Cricetulus migratorius GN=CGA PE=2 SV=1
39 : A2AVN2_MOUSE 0.75 0.87 5 89 33 117 85 0 0 117 A2AVN2 Glycoprotein hormones alpha chain (Fragment) OS=Mus musculus GN=Cga PE=3 SV=1
40 : B5TXE0_CEREL 0.75 0.89 4 92 32 120 89 0 0 120 B5TXE0 Glycoprotein alpha-subunit (Precursor) OS=Cervus elaphus PE=2 SV=1
41 : G1P219_MYOLU 0.75 0.87 4 92 32 120 89 0 0 120 G1P219 Uncharacterized protein OS=Myotis lucifugus GN=CGA PE=3 SV=1
42 : GLHA_AILME 0.75 0.87 4 92 32 120 89 0 0 120 Q8WN20 Glycoprotein hormones alpha chain OS=Ailuropoda melanoleuca GN=CGA PE=2 SV=1
43 : GLHA_BOSMU 0.75 0.89 4 92 32 120 89 0 0 120 Q19PY8 Glycoprotein hormones alpha chain OS=Bos mutus grunniens GN=CGA PE=3 SV=1
44 : GLHA_BOVIN 0.75 0.89 4 92 32 120 89 0 0 120 P01217 Glycoprotein hormones alpha chain OS=Bos taurus GN=CGA PE=1 SV=1
45 : GLHA_BUBBU 0.75 0.89 4 92 32 120 89 0 0 120 Q9GL36 Glycoprotein hormones alpha chain OS=Bubalus bubalis GN=CGA PE=2 SV=1
46 : GLHA_CERNI 0.75 0.89 4 92 32 120 89 0 0 120 Q8WMR3 Glycoprotein hormones alpha chain OS=Cervus nippon GN=CGA PE=2 SV=1
47 : GLHA_FELCA 0.75 0.86 4 91 32 119 88 0 0 120 Q52R91 Glycoprotein hormones alpha chain OS=Felis catus GN=CGA PE=2 SV=1
48 : GLHA_MESAU 0.75 0.86 5 92 33 120 88 0 0 120 Q9ERG5 Glycoprotein hormones alpha chain OS=Mesocricetus auratus GN=CGA PE=2 SV=1
49 : GLHA_PANTA 0.75 0.88 4 92 32 120 89 0 0 120 Q9BDI8 Glycoprotein hormones alpha chain OS=Panthera tigris altaica GN=CGA PE=2 SV=1
50 : GLHA_PIG 0.75 0.88 4 92 32 120 89 0 0 120 P01219 Glycoprotein hormones alpha chain OS=Sus scrofa GN=CGA PE=1 SV=2
51 : GLHA_SHEEP 0.75 0.89 4 92 32 120 89 0 0 120 P01218 Glycoprotein hormones alpha chain OS=Ovis aries GN=CGA PE=1 SV=2
52 : L8I3U1_9CETA 0.75 0.89 4 92 32 120 89 0 0 120 L8I3U1 Glycoprotein hormones alpha chain OS=Bos mutus GN=M91_07402 PE=3 SV=1
53 : L9L4M8_TUPCH 0.75 0.89 4 92 32 120 89 0 0 120 L9L4M8 Glycoprotein hormones alpha chain OS=Tupaia chinensis GN=TREES_T100001432 PE=3 SV=1
54 : Q2HWE5_PHOSU 0.75 0.88 4 92 33 121 89 0 0 121 Q2HWE5 Glycoprotein hormones, alpha subunit protein OS=Phodopus sungorus GN=CGA PE=2 SV=1
55 : Q9DGA6_NEOFS 0.75 0.89 6 92 35 121 87 0 0 121 Q9DGA6 Pituitary glycoprotein hormone alpha subunit OS=Neoceratodus forsteri PE=2 SV=1
56 : F1ACG5_CTEID 0.74 0.84 6 92 1 86 87 1 1 86 F1ACG5 Gonadotropin alpha subunit (Fragment) OS=Ctenopharyngodon idella PE=3 SV=1
57 : F1ACG8_MEGAM 0.74 0.86 6 92 1 86 87 1 1 86 F1ACG8 Gonadotropin alpha subunit (Fragment) OS=Megalobrama amblycephala PE=3 SV=1
58 : G5B701_HETGA 0.74 0.87 4 92 32 120 89 0 0 120 G5B701 Glycoprotein hormones alpha chain OS=Heterocephalus glaber GN=GW7_13482 PE=3 SV=1
59 : GLHA_AOTNA 0.74 0.86 5 91 33 119 87 0 0 120 Q3HRV5 Glycoprotein hormones alpha chain OS=Aotus nancymaae GN=CGA PE=2 SV=1
60 : GLHA_CAPHI 0.74 0.88 4 92 32 120 89 0 0 120 Q8WMW8 Glycoprotein hormones alpha chain OS=Capra hircus GN=CGA PE=2 SV=1
61 : GLHA_HORSE 0.74 0.84 5 91 33 119 87 0 0 120 P01220 Glycoprotein hormones alpha chain OS=Equus caballus GN=CGA PE=1 SV=3
62 : GLHA_MICMO 0.74 0.86 5 91 33 119 87 0 0 120 Q9ERG3 Glycoprotein hormones alpha chain OS=Microtus montebelli GN=CGA PE=2 SV=1
63 : GLHA_STRCA 0.74 0.88 5 92 9 96 88 0 0 96 P80665 Glycoprotein hormones alpha chain OS=Struthio camelus GN=CGA PE=1 SV=1
64 : Q8JJB6_CHIRE 0.74 0.87 6 92 34 120 87 0 0 120 Q8JJB6 Pituitary glycoprotein hormone alpha subunit OS=Chinemys reevesii PE=2 SV=1
65 : D8KW92_ZONAL 0.73 0.88 4 92 32 120 89 0 0 120 D8KW92 Glycoprotein hormones, alpha polypeptide OS=Zonotrichia albicollis GN=CGA PE=3 SV=1
66 : D9N552_ALLMI 0.73 0.88 4 92 32 119 89 1 1 119 D9N552 Glycoprotein hormone alpha subunit OS=Alligator mississippiensis GN=GPH a PE=3 SV=1
67 : F1NJD3_CHICK 0.73 0.88 4 92 32 120 89 0 0 120 F1NJD3 Uncharacterized protein OS=Gallus gallus GN=CGA PE=3 SV=2
68 : F7B1R7_HORSE 0.73 0.83 2 91 26 115 90 0 0 116 F7B1R7 Uncharacterized protein OS=Equus caballus GN=CG PE=3 SV=1
69 : GLHA2_CYPCA 0.73 0.86 7 92 34 118 86 1 1 118 P18857 Glycoprotein hormones alpha chain 2 OS=Cyprinus carpio GN=cgab PE=3 SV=1
70 : GLHA_COTJA 0.73 0.88 4 92 32 120 89 0 0 120 P68242 Glycoprotein hormones alpha chain OS=Coturnix coturnix japonica GN=CGA PE=2 SV=1
71 : GLHA_MELGA 0.73 0.88 4 92 32 120 89 0 0 120 P68241 Glycoprotein hormones alpha chain OS=Meleagris gallopavo GN=CGA PE=1 SV=1
72 : GLHA_NIPNI 0.73 0.88 4 92 32 120 89 0 0 120 Q8JIE9 Glycoprotein hormones alpha chain OS=Nipponia nippon GN=CGA PE=3 SV=1
73 : H0ZQE8_TAEGU 0.73 0.88 4 92 33 121 89 0 0 121 H0ZQE8 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=CGA PE=3 SV=1
74 : H3A6Y9_LATCH 0.73 0.89 4 92 32 120 89 0 0 120 H3A6Y9 Uncharacterized protein OS=Latimeria chalumnae PE=3 SV=1
75 : K7G081_PELSI 0.73 0.88 4 92 33 121 89 0 0 121 K7G081 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis GN=CGA PE=3 SV=1
76 : Q5D1X6_9TELE 0.73 0.86 7 92 34 118 86 1 1 118 Q5D1X6 GTH alpha subunit 4 OS=Carassius auratus x Cyprinus carpio PE=3 SV=1
77 : Q5RT66_CARAU 0.73 0.85 7 92 34 118 86 1 1 118 Q5RT66 GTH alpha subunit 2 OS=Carassius auratus PE=3 SV=1
78 : R0LK79_ANAPL 0.73 0.88 4 92 33 121 89 0 0 121 R0LK79 Glycoprotein hormones alpha chain (Fragment) OS=Anas platyrhynchos GN=Anapl_09563 PE=3 SV=1
79 : U3IQS1_ANAPL 0.73 0.88 4 91 38 125 88 0 0 125 U3IQS1 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=CGA PE=3 SV=1
80 : U3JJS4_FICAL 0.73 0.88 4 92 38 126 89 0 0 126 U3JJS4 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=CGA PE=3 SV=1
81 : B2YI99_ANSCY 0.72 0.88 4 92 32 120 89 0 0 120 B2YI99 Follicle stimulating hormone alpha polypeptide OS=Anser cygnoides PE=2 SV=1
82 : E9RFG3_CORMC 0.72 0.88 4 92 32 120 89 0 0 120 E9RFG3 Glycoprotein hormones alpha subunit OS=Corvus macrorhynchos GN=CGA PE=2 SV=1
83 : F1ACG6_HYPMO 0.72 0.85 6 92 1 86 87 1 1 86 F1ACG6 Gonadotropin alpha subunit (Fragment) OS=Hypophthalmichthys molitrix PE=3 SV=1
84 : GLHA_EQUAS 0.72 0.85 5 91 33 119 87 0 0 120 Q28365 Glycoprotein hormones alpha chain OS=Equus asinus GN=CGA PE=2 SV=1
85 : Q5D1X9_9TELE 0.72 0.84 7 92 33 117 86 1 1 117 Q5D1X9 GTH alpha subunit 1 OS=Carassius auratus x Cyprinus carpio PE=3 SV=1
86 : Q90287_CARAU 0.72 0.84 7 87 29 108 81 1 1 108 Q90287 Gonadotropin alpha subunit (Fragment) OS=Carassius auratus PE=2 SV=1
87 : Q9QYA8_PHOSU 0.72 0.85 4 85 25 106 82 0 0 106 Q9QYA8 Gonadotropin subunit alpha (Fragment) OS=Phodopus sungorus PE=2 SV=1
88 : A7XUG2_CTEID 0.71 0.84 7 92 34 118 86 1 1 118 A7XUG2 Gonadotropin alpha subunit OS=Ctenopharyngodon idella PE=3 SV=1
89 : A7XUG4_HYPNO 0.71 0.84 7 92 34 118 86 1 1 118 A7XUG4 Gonadotropin alpha subunit OS=Hypophthalmichthys nobilis PE=3 SV=1
90 : B2L4V1_XENBO 0.71 0.86 5 92 33 122 90 2 2 122 B2L4V1 Glycoprotein hormone alpha subunit (Fragment) OS=Xenopus borealis GN=cga PE=2 SV=1
91 : B2ZFP8_ACISI 0.71 0.88 6 92 33 121 89 1 2 121 B2ZFP8 Gonadotropin alpha II subunit OS=Acipenser sinensis PE=2 SV=1
92 : B8Y6D6_ANGMA 0.71 0.85 6 91 33 115 86 1 3 116 B8Y6D6 Gonadotropin alpha subunit OS=Anguilla marmorata PE=3 SV=1
93 : D0ETM2_TACFU 0.71 0.84 7 91 32 115 85 1 1 116 D0ETM2 Gonadotropin alpha subunit OS=Tachysurus fulvidraco GN=GTHa PE=3 SV=1
94 : F1ACG4_MYLPI 0.71 0.85 6 91 1 85 86 1 1 86 F1ACG4 Gonadotropin alpha subunit (Fragment) OS=Mylopharyngodon piceus PE=3 SV=1
95 : F1ACH0_XENMA 0.71 0.86 9 92 4 86 84 1 1 86 F1ACH0 Gonadotropin alpha subunit (Fragment) OS=Xenocypris macrolepis PE=3 SV=1
96 : F1ACH1_9TELE 0.71 0.85 6 92 1 86 87 1 1 86 F1ACH1 Gonadotropin alpha subunit (Fragment) OS=Culter alburnus PE=3 SV=1
97 : F6W2E6_XENTR 0.71 0.87 5 92 33 122 90 2 2 122 F6W2E6 Uncharacterized protein OS=Xenopus tropicalis GN=cga PE=3 SV=1
98 : F7J053_MISAN 0.71 0.83 7 92 35 119 86 1 1 119 F7J053 Glycoprotein alpha OS=Misgurnus anguillicaudatus GN=GPH alpha PE=3 SV=1
99 : GLHA1_CYPCA 0.71 0.84 7 92 34 118 86 1 1 118 P01221 Glycoprotein hormones alpha chain 1 OS=Cyprinus carpio GN=cgaa PE=1 SV=2
100 : GLHA_ANGAN 0.71 0.85 6 91 34 116 86 1 3 117 P27794 Glycoprotein hormones alpha chain OS=Anguilla anguilla GN=cga PE=3 SV=1
101 : GLHA_CAVPO 0.71 0.84 4 92 32 120 89 0 0 120 Q9JK68 Glycoprotein hormones alpha chain OS=Cavia porcellus GN=CGA PE=2 SV=1
102 : GLHA_CLAGA 0.71 0.84 7 91 32 115 85 1 1 116 P53542 Glycoprotein hormones alpha chain OS=Clarias gariepinus GN=cga PE=3 SV=1
103 : GLHA_CTEID 0.71 0.84 7 92 34 118 86 1 1 118 P30983 Glycoprotein hormones alpha chain OS=Ctenopharyngodon idella GN=cga PE=3 SV=1
104 : GLHA_EQUBU 0.71 0.85 5 91 33 119 87 0 0 120 O46642 Glycoprotein hormones alpha chain OS=Equus burchelli GN=CGA PE=2 SV=1
105 : GLHA_HYPMO 0.71 0.84 7 92 34 118 86 1 1 118 P37037 Glycoprotein hormones alpha chain OS=Hypophthalmichthys molitrix GN=cga PE=1 SV=1
106 : GLHA_LITCT 0.71 0.83 7 92 11 97 87 1 1 97 P80051 Glycoprotein hormones alpha chain OS=Lithobates catesbeiana GN=cga PE=1 SV=1
107 : J7F4D3_LABRO 0.71 0.84 7 92 34 118 86 1 1 118 J7F4D3 Gonadotropin subunit alpha OS=Labeo rohita GN=GTHalpha PE=3 SV=1
108 : L7R9Q7_9TELE 0.71 0.84 7 92 34 118 86 1 1 118 L7R9Q7 Gonadotropin subunit GtHalpha OS=Procypris rabaudi PE=3 SV=1
109 : Q14DX5_SILME 0.71 0.84 7 91 32 115 85 1 1 116 Q14DX5 Gonadotropic hormone subunit alpha OS=Silurus meridionalis PE=3 SV=1
110 : Q1EPR1_OCTDE 0.71 0.85 4 92 32 120 89 0 0 120 Q1EPR1 Glycoprotein hormone alpha subunit protein OS=Octodon degus GN=CGA PE=2 SV=1
111 : Q5D1X7_9TELE 0.71 0.84 7 92 34 118 86 1 1 118 Q5D1X7 GTH alpha subunit 3 OS=Carassius auratus x Cyprinus carpio PE=3 SV=1
112 : Q5D1X8_9TELE 0.71 0.84 7 92 33 117 86 1 1 117 Q5D1X8 GTH alpha subunit 2 OS=Carassius auratus x Cyprinus carpio PE=3 SV=1
113 : Q5I9C7_9TELE 0.71 0.84 7 92 33 117 86 1 1 117 Q5I9C7 GTH alpha subunit 4 OS=Carassius auratus x Cyprinus carpio x Carassius cuvieri PE=3 SV=1
114 : Q5IAS9_9TELE 0.71 0.84 7 92 34 118 86 1 1 118 Q5IAS9 GTH alpha subunit 2 OS=Carassius auratus x Cyprinus carpio x Carassius cuvieri PE=3 SV=1
115 : Q5IAT0_9TELE 0.71 0.84 7 92 34 118 86 1 1 118 Q5IAT0 GTH alpha subunit 1-2 OS=Carassius auratus x Cyprinus carpio x Carassius cuvieri PE=3 SV=1
116 : Q5IAT1_9TELE 0.71 0.85 7 92 33 117 86 1 1 117 Q5IAT1 GTH alpha subunit 1 OS=Carassius auratus x Cyprinus carpio x Carassius cuvieri PE=3 SV=1
117 : Q6INB1_XENLA 0.71 0.87 5 92 33 122 90 2 2 122 Q6INB1 MGC84501 protein OS=Xenopus laevis GN=cga PE=2 SV=1
118 : Q75NP8_ANGJA 0.71 0.85 6 91 34 116 86 1 3 117 Q75NP8 Pituitary glycoprotein hormone alpha subunit (Precursor) OS=Anguilla japonica GN=GPH alpha PE=3 SV=1
119 : V5QQT1_HETFO 0.71 0.84 7 91 32 115 85 1 1 116 V5QQT1 Glycoprotein hormones alpha chain OS=Heteropneustes fossilis PE=3 SV=1
120 : W5L633_ASTMX 0.71 0.80 7 92 34 120 87 1 1 120 W5L633 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
121 : F1ACG7_HYPNO 0.70 0.85 6 92 1 86 87 1 1 86 F1ACG7 Gonadotropin alpha subunit (Fragment) OS=Hypophthalmichthys nobilis PE=3 SV=1
122 : F1ACG9_9TELE 0.70 0.84 6 92 1 86 87 1 1 86 F1ACG9 Gonadotropin alpha subunit (Fragment) OS=Elopichthys bambusa PE=3 SV=1
123 : F7G9A2_ORNAN 0.70 0.86 7 92 36 121 86 0 0 121 F7G9A2 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=CGA PE=3 SV=1
124 : GLHA_PHYCD 0.70 0.88 4 92 8 96 89 0 0 96 P25329 Glycoprotein hormones alpha chain OS=Physeter catodon GN=CGA PE=1 SV=1
125 : Q5RT67_CARAU 0.70 0.84 7 92 33 117 86 1 1 117 Q5RT67 GTH alpha subunit 1 OS=Carassius auratus PE=3 SV=1
126 : Q6T5C1_CHICK 0.70 0.87 4 73 24 93 70 0 0 94 Q6T5C1 Pituitary glycoprotein hormone alpha subunit (Fragment) OS=Gallus gallus GN=GPHA PE=3 SV=1
127 : Q8JJB7_SPHPU 0.70 0.85 4 92 32 120 89 0 0 120 Q8JJB7 Pituitary glycoprotein hormone alpha subunit OS=Sphenodon punctatus PE=2 SV=1
128 : Q90YF0_SCYCA 0.70 0.86 2 92 30 120 91 0 0 120 Q90YF0 Glycoprotein hormone alpha subunit protein (Precursor) OS=Scyliorhinus canicula PE=2 SV=1
129 : W5QKC8_9TELE 0.70 0.84 6 92 33 118 87 1 1 118 W5QKC8 Gonadotropin alpha subunit OS=Gobiocypris rarus GN=GTH-alpha PE=4 SV=1
130 : B9EMI1_SALSA 0.69 0.79 7 92 34 118 86 1 1 118 B9EMI1 Glycoprotein hormones alpha chain 1 OS=Salmo salar GN=GLHA1 PE=3 SV=1
131 : GLHA_ICTPU 0.69 0.82 7 91 32 115 85 1 1 116 Q9YGP3 Glycoprotein hormones alpha chain OS=Ictalurus punctatus GN=cga PE=3 SV=1
132 : GLHA_MURCI 0.69 0.84 7 92 11 93 86 1 3 93 P12836 Glycoprotein hormones alpha chain OS=Muraenesox cinereus GN=cga PE=1 SV=1
133 : Q5YFR9_ACIGU 0.69 0.83 6 92 33 115 87 1 4 115 Q5YFR9 Glycoprotein alpha chain OS=Acipenser gueldenstaedtii PE=3 SV=1
134 : Q6QX43_DANRE 0.69 0.79 7 92 34 117 86 1 2 117 Q6QX43 Glycoprotein hormones, alpha polypeptide OS=Danio rerio GN=cga PE=3 SV=1
135 : Q75N55_RANJA 0.69 0.82 6 92 34 120 88 2 2 120 Q75N55 Gonadotropin alpha-subunit OS=Rana japonica GN=GTH alpha PE=2 SV=1
136 : Q800P1_ONCKI 0.69 0.79 7 92 30 111 86 1 4 111 Q800P1 Glycoprotein hormone alpha 2 subunit (Fragment) OS=Oncorhynchus kisutch PE=2 SV=1
137 : F1BZV8_CALMI 0.68 0.89 2 92 30 119 91 1 1 119 F1BZV8 Glycoprotein hormone alpha subunit protein OS=Callorhynchus milii PE=4 SV=1
138 : GLHA2_ONCKE 0.68 0.79 6 92 32 114 87 1 4 114 P69063 Glycoprotein hormones alpha chain 2 OS=Oncorhynchus keta GN=cgab PE=3 SV=1
139 : GLHA2_ONCTS 0.68 0.79 6 92 32 114 87 1 4 114 P69062 Glycoprotein hormones alpha chain 2 OS=Oncorhynchus tshawytscha GN=cgab PE=3 SV=1
140 : Q5J5D6_9TELE 0.68 0.79 6 92 32 114 87 1 4 114 Q5J5D6 Gonadotropin alpha (Fragment) OS=Brachymystax lenok PE=2 SV=1
141 : Q6TM06_SALSA 0.68 0.79 6 92 32 114 87 1 4 114 Q6TM06 Glycoprotein hormones alpha chain 2 (Precursor) OS=Salmo salar GN=GLHA2 PE=3 SV=1
142 : Q90286_CARAU 0.68 0.83 7 87 28 107 81 1 1 107 Q90286 Gonadotropin alpha subunit (Fragment) OS=Carassius auratus PE=2 SV=1
143 : Q91371_ONCMA 0.68 0.79 6 92 32 114 87 1 4 114 Q91371 Gonadotrophin alpha 2 subunit OS=Oncorhynchus masou PE=3 SV=1
144 : Q9DG94_ONCMY 0.68 0.79 6 92 32 114 87 1 4 114 Q9DG94 Gonadotropin alpha subunit OS=Oncorhynchus mykiss GN=GTH alpha PE=3 SV=1
145 : B2ZFP7_ACISI 0.67 0.78 5 92 32 115 88 1 4 115 B2ZFP7 Gonadotropin alpha I subunit OS=Acipenser sinensis PE=3 SV=1
146 : B5LSW8_9LABR 0.67 0.78 6 91 33 116 86 2 2 117 B5LSW8 Gonadotropin alpha subunit OS=Amphiprion melanopus PE=3 SV=1
147 : GLHA1_ONCKE 0.67 0.83 7 92 24 108 86 1 1 108 P13152 Glycoprotein hormones alpha chain 1 (Fragment) OS=Oncorhynchus keta GN=cgaa PE=3 SV=1
148 : GLHA_BALAC 0.67 0.89 4 92 8 96 89 0 0 96 P37036 Glycoprotein hormones alpha chain OS=Balaenoptera acutorostrata GN=CGA PE=1 SV=1
149 : Q800P2_ONCKI 0.67 0.79 7 92 30 114 86 1 1 114 Q800P2 Glycoprotein hormone alpha 1 subunit (Fragment) OS=Oncorhynchus kisutch PE=2 SV=1
150 : Q91370_ONCMA 0.67 0.80 7 92 35 119 86 1 1 119 Q91370 Gonadotrophin alpha 1 subunit OS=Oncorhynchus masou PE=3 SV=1
151 : A5Z1E4_ACASC 0.64 0.76 7 91 34 116 85 2 2 117 A5Z1E4 Gonadotropin alpha subunit OS=Acanthopagrus schlegelii PE=3 SV=1
152 : B2GVL8_TAKRU 0.64 0.78 6 91 33 116 86 2 2 117 B2GVL8 Gonadotropin alpha-subunit OS=Takifugu rubripes GN=Cga PE=3 SV=1
153 : E1CGC4_TAKNI 0.64 0.78 6 91 33 116 86 2 2 117 E1CGC4 Glycoprotein alpha subunit (Precursor) OS=Takifugu niphobles GN=GPalpha PE=3 SV=1
154 : F1C642_ACASC 0.64 0.76 7 91 14 96 85 2 2 96 F1C642 Gonadotropin alpha subunit (Fragment) OS=Acanthopagrus schlegelii PE=2 SV=1
155 : G3F8D0_SCOJP 0.64 0.81 7 91 34 116 85 2 2 117 G3F8D0 Glycoprotein hormone alpha subunit OS=Scomber japonicus PE=3 SV=1
156 : G3P3C6_GASAC 0.64 0.78 7 91 34 120 88 3 4 121 G3P3C6 Uncharacterized protein OS=Gasterosteus aculeatus PE=3 SV=1
157 : GLHA_ACALA 0.64 0.76 7 91 34 116 85 2 2 117 P30970 Glycoprotein hormones alpha chain OS=Acanthopagrus latus GN=cga PE=3 SV=1
158 : GLHA_MORSA 0.64 0.80 7 91 34 116 85 2 2 117 Q91119 Glycoprotein hormones alpha chain OS=Morone saxatilis GN=cga PE=3 SV=2
159 : H2SP40_TAKRU 0.64 0.78 6 91 35 118 86 2 2 119 H2SP40 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101075135 PE=3 SV=1
160 : H2SP41_TAKRU 0.64 0.78 6 91 47 130 86 2 2 131 H2SP41 Uncharacterized protein OS=Takifugu rubripes GN=LOC101075135 PE=3 SV=1
161 : I6ZZJ6_LATJA 0.64 0.80 7 91 41 123 85 2 2 124 I6ZZJ6 Gonadotropin alpha subunit OS=Lateolabrax japonicus PE=2 SV=1
162 : Q71SH0_SPAAU 0.64 0.76 7 91 34 116 85 2 2 117 Q71SH0 Gonadotropin alpha OS=Sparus aurata PE=3 SV=1
163 : Q8AXA4_9SMEG 0.64 0.80 7 91 34 116 85 2 2 117 Q8AXA4 Glycoprotein alpha subunit (Precursor) OS=Ophisternon bengalense PE=3 SV=1
164 : Q90WD7_ACIBE 0.64 0.78 5 92 32 115 89 3 6 115 Q90WD7 Glycoprotein hormone alpha subunit protein (Precursor) OS=Acipenser baerii PE=3 SV=1
165 : Q90ZY3_DICLA 0.64 0.80 7 91 34 116 85 2 2 117 Q90ZY3 Gonadotropin alpha subunit OS=Dicentrarchus labrax PE=3 SV=1
166 : Q5BMR0_ACASC 0.63 0.76 7 89 34 114 83 2 2 114 Q5BMR0 Gonadotropin alpha subunit (Fragment) OS=Acanthopagrus schlegelii PE=2 SV=1
167 : A5JVA3_EPIBR 0.62 0.80 7 91 34 116 85 2 2 117 A5JVA3 Gonadotropin common-alpha subunit OS=Epinephelus bruneus PE=3 SV=1
168 : D4QE64_EPIME 0.62 0.80 7 91 35 117 85 2 2 118 D4QE64 Gonadotropin common-alpha subunit OS=Epinephelus merra GN=GTH common-alpha PE=3 SV=1
169 : E1U2W9_KRYMA 0.62 0.77 6 91 33 116 86 2 2 117 E1U2W9 Gonadotropin alpha subunit OS=Kryptolebias marmoratus PE=3 SV=1
170 : H2MIT4_ORYLA 0.62 0.79 7 91 51 134 85 1 1 135 H2MIT4 Uncharacterized protein OS=Oryzias latipes GN=LOC100144350 PE=3 SV=1
171 : J9PFJ6_THUTH 0.62 0.78 7 87 34 112 81 2 2 112 J9PFJ6 Gonadotropin hormone GPH alpha subunit (Fragment) OS=Thunnus thynnus PE=2 SV=1
172 : Q6X4V6_9PERC 0.62 0.81 7 91 34 116 85 2 2 117 Q6X4V6 Pituitary glycoprotein hormone alpha subunit OS=Channa maculata PE=3 SV=1
173 : Q7SYG7_HYPSE 0.62 0.80 7 91 34 116 85 2 2 117 Q7SYG7 Glycoprotein hormone(GPH) alpha subunit (Precursor) OS=Hyporthodus septemfasciatus GN=GPH-7G PE=3 SV=1
174 : Q7T2Y4_ORENI 0.62 0.79 7 91 34 116 85 2 2 117 Q7T2Y4 Gonadotropin alpha subunit OS=Oreochromis niloticus PE=3 SV=1
175 : Q8AUU2_EPICO 0.62 0.80 7 91 34 116 85 2 2 117 Q8AUU2 Gonadotropin alpha subunit OS=Epinephelus coioides PE=3 SV=1
176 : Q8AXA3_MONAL 0.62 0.79 7 91 34 116 85 2 2 117 Q8AXA3 Glycoprotein alpha subunit (Precursor) OS=Monopterus albus PE=3 SV=1
177 : Q9DEH2_PAGMA 0.62 0.79 7 91 34 116 85 2 2 117 Q9DEH2 Alpha-glycoprotein subunit OS=Pagrus major PE=3 SV=1
178 : Q9DEI5_OREMO 0.62 0.79 7 91 34 116 85 2 2 117 Q9DEI5 Glycoprotein alpha subunit (Fragment) OS=Oreochromis mossambicus PE=2 SV=1
179 : D1MGN2_SCIOC 0.61 0.79 7 91 49 131 85 2 2 132 D1MGN2 Glycoprotein alpha subunit OS=Sciaenops ocellatus PE=2 SV=1
180 : G3HJ35_CRIGR 0.61 0.81 5 81 33 109 77 0 0 160 G3HJ35 Glycoprotein hormones alpha chain OS=Cricetulus griseus GN=I79_010669 PE=3 SV=1
181 : Q56TL7_SEBSC 0.61 0.79 7 91 49 131 85 2 2 132 Q56TL7 Gonadotropin alpha subunit OS=Sebastes schlegelii PE=2 SV=1
182 : A7UDN7_ORYLA 0.60 0.73 6 91 48 136 89 2 3 137 A7UDN7 Gonadotropin alpha subunit OS=Oryzias latipes PE=2 SV=1
183 : A8J4H5_9LABR 0.60 0.77 6 91 33 116 86 2 2 117 A8J4H5 Glycoprotein hormones alpha subunit OS=Pseudolabrus sieboldi PE=3 SV=1
184 : F8WKS3_ORYLA 0.60 0.73 6 91 48 136 89 2 3 137 F8WKS3 Glycoprotein hormones, alpha polypeptide OS=Oryzias latipes GN=cga PE=2 SV=1
185 : GLHA_THUOB 0.60 0.77 7 92 11 94 86 2 2 94 P37204 Glycoprotein hormones alpha chain OS=Thunnus obesus GN=cga PE=1 SV=1
186 : M4A0A3_XIPMA 0.60 0.74 7 91 41 123 85 2 2 125 M4A0A3 Uncharacterized protein OS=Xiphophorus maculatus PE=3 SV=1
187 : Q801A1_EPIAK 0.60 0.78 7 91 34 116 85 2 2 117 Q801A1 Gonadotropin alpha subunit OS=Epinephelus akaara PE=3 SV=1
188 : Q8JJB5_9SAUR 0.60 0.74 7 92 35 124 90 3 4 124 Q8JJB5 Pituitary glycoprotein hormone alpha subunit OS=Takydromus tachydromoides PE=2 SV=1
189 : Q90W18_HIPHI 0.60 0.76 7 91 49 131 85 2 2 132 Q90W18 Gonadotropin alpha subunit (Precursor) OS=Hippoglossus hippoglossus GN=GTH PE=2 SV=1
190 : A1ILL6_9GOBI 0.59 0.73 6 91 35 118 86 2 2 119 A1ILL6 Glycoprotein hormone alpha subunit OS=Periophthalmus modestus GN=GPH a PE=3 SV=1
191 : B0VXR7_GADMO 0.59 0.76 6 91 34 122 90 3 5 123 B0VXR7 Glycoprotein hormone alpha subunit OS=Gadus morhua PE=2 SV=1
192 : D9N556_BOIIR 0.59 0.73 5 92 33 124 92 3 4 124 D9N556 Glycoprotein hormone alpha subunit OS=Boiga irregularis GN=GPH a PE=2 SV=1
193 : Q90W29_PAROL 0.59 0.78 7 91 41 123 85 2 2 124 Q90W29 Gonadotropin alpha subunit OS=Paralichthys olivaceus PE=2 SV=1
194 : V9TLL1_SERQU 0.59 0.73 6 91 33 113 86 2 5 114 V9TLL1 Glycoprotein alpha subunit OS=Seriola quinqueradiata PE=3 SV=1
195 : GLHA_FUNHE 0.58 0.74 7 91 41 123 85 2 2 125 P47744 Glycoprotein hormones alpha chain OS=Fundulus heteroclitus GN=cga PE=2 SV=1
196 : H9CTT3_CYNSE 0.58 0.73 6 91 43 126 86 2 2 127 H9CTT3 Gonadotropin common alpha subunit OS=Cynoglossus semilaevis PE=2 SV=1
197 : Q2EGA1_9SMEG 0.58 0.79 6 91 40 123 86 2 2 128 Q2EGA1 Glycoprotein hormone alpha subunit OS=Odontesthes bonariensis PE=2 SV=1
198 : A6BMG6_9TELE 0.57 0.71 1 92 30 121 93 2 2 122 A6BMG6 Gonadotropin alpha subunit OS=Engraulis japonicus PE=2 SV=1
199 : S4VF59_TRAJP 0.57 0.70 2 91 29 113 90 2 5 114 S4VF59 Gonadotropin alpha subunit OS=Trachurus japonicus PE=3 SV=1
200 : B2KS58_SOLSE 0.56 0.78 7 91 49 131 85 2 2 132 B2KS58 Gonadotropin alpha subunit OS=Solea senegalensis PE=2 SV=1
201 : S5UFP2_ANOFI 0.56 0.75 6 91 48 135 89 3 4 136 S5UFP2 Glycoprotein hormone alpha subunit (Precursor) OS=Anoplopoma fimbria PE=2 SV=1
202 : V8NN48_OPHHA 0.54 0.68 5 85 33 117 85 3 4 117 V8NN48 Glycoprotein hormones alpha chain (Fragment) OS=Ophiophagus hannah GN=CGA PE=3 SV=1
203 : Q4TUC5_HIPKU 0.52 0.68 7 91 34 116 85 2 2 117 Q4TUC5 Pituitary glycoprotein hormone alpha subunit OS=Hippocampus kuda PE=3 SV=1
204 : E0D4Q2_9CRAN 0.44 0.61 2 91 24 115 94 4 6 118 E0D4Q2 Glycoprotein hormone alpha subunit OS=Eptatretus atami GN=GpH-alpha PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A A 0 0 134 9 80 AAAAAAS
2 2 A P + 0 0 133 15 45 PPPPPPP P P
3 3 A D - 0 0 130 16 49 DDDDDDDG D D
4 4 A V - 0 0 105 67 42 VVVVVVVVMMMM V MMLMM M VMMI MMMMMMMM MMMMMM M M MMMV M
5 5 A Q - 0 0 170 95 19 QQQQQQQQQQQQ IQ QQQQQQQQQQQQQQQ QQQQQQQQQQQQQQQQQQQQHQ QQQQQQ QQQI Q
6 6 A D - 0 0 149 134 24 DDDDDDDDDDDD EGEGGGGGGGGGGGGGGGEGGGSGGGGVGGGGGGGGGGGGGGGGGEGDGGGGGGD G
7 7 A a - 0 0 60 204 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A P - 0 0 71 204 63 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPEEPPPPPPPPPPPEP
9 9 A E - 0 0 97 205 10 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
10 10 A b S S+ 0 0 13 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A T - 0 0 74 205 53 TTTTTTTQKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
12 12 A L - 0 0 46 205 4 LLLLLLLLPPPPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A Q - 0 0 90 205 50 QQQQQQQHRRRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKRKGGGGGRKG
14 14 A E - 0 0 104 205 57 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
15 15 A N > - 0 0 8 205 5 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
16 16 A P T 4 S+ 0 0 118 205 73 PPPPPPPPKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKNNKKKKKRRRRRKNR
17 17 A F T 4 S+ 0 0 106 205 64 FFFFLFFFFFFFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYIIYYYYYFFFFFYIF
18 18 A F T 4 S+ 0 0 50 205 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
19 19 A S < + 0 0 54 205 16 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSFSSSSSSFSS
20 20 A Q B > -A 23 0A 117 205 47 QQQQQQQQKKKKKRRRKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKK
21 21 A P T 3 S+ 0 0 136 205 86 PPPPPPPPPPPPLLLLLGLLLLLLLLLLLLLLLLLLLLLPLLPPPPLLLLPPLLPPPLLPLLPPPPPLPP
22 22 A G T 3 S+ 0 0 76 164 35 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGDDDDGGGGDDGGGGGGGDGGGGGGGGGG
23 23 A A B < +A 20 0A 23 191 69 AAAAAAAAAAAAASASAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAVAAVNAAAAAVAA
24 24 A P - 0 0 66 196 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
25 25 A I - 0 0 4 196 14 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIIIIIIIVIIIIIIVVIVIIVVIIIIIVI
26 26 A L - 0 0 21 197 9 LLLLLLLLYYYYYYYYYYYYYYYYYYFYYYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
27 27 A Q - 0 0 102 205 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
28 28 A c - 0 0 17 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 29 A M - 0 0 63 205 49 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMTMMMMMMMMMMMMMMMMMMMMMMSMMMAMKMTTTTTKMT
30 30 A G + 0 0 35 205 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A a + 0 0 28 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A d - 0 0 10 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A F - 0 0 103 205 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
34 34 A S + 0 0 69 205 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
35 35 A R - 0 0 156 205 6 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRSRRRRRRRRRRRRRRRRRRRRRR
36 36 A A + 0 0 54 205 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A Y S S+ 0 0 195 205 0 YYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
38 38 A P S S- 0 0 94 205 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
39 39 A T - 0 0 116 205 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
40 40 A P - 0 0 97 205 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
41 41 A L - 0 0 153 205 51 LLLLLLLLLLVVALPLAAAAAAAAAAAAAAAFAAAAAAAAAAAAAAAAAAAAAAALLAVAAALMMMMALM
42 42 A R + 0 0 232 205 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
43 43 A S + 0 0 119 205 36 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
44 44 A K S S- 0 0 133 205 46 KKKKKKKKKKKKKQKQKKKKKKKKKKKKKKKQKKKKKKKKKKKKKKKKKKKKKKKKKKQKRKKKKKKRKK
45 45 A K S S+ 0 0 188 205 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
46 46 A T + 0 0 87 205 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
47 47 A M + 0 0 177 205 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
48 48 A L - 0 0 67 205 59 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLL
49 49 A V - 0 0 112 205 22 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
50 50 A Q + 0 0 125 205 15 QQQQQQVEQQQQPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
51 51 A K S S- 0 0 154 205 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
52 52 A N S S+ 0 0 148 205 1 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
53 53 A V + 0 0 75 205 4 VVVVVVVVVVVVIVIVIIIIIIIIIIIIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIII
54 54 A T S S+ 0 0 70 205 1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
55 55 A S S S+ 0 0 76 205 1 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSLSSSSSSSSSSSSSSSSSSSSSSSSSSSS
56 56 A E - 0 0 75 205 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
57 57 A S + 0 0 60 205 13 SSSSSSSSSSSSASASAAAAAAAAAAAAAAASAAAAAAAAAAAAAAAAAAAAAAAAAASASAAAAAASAA
58 58 A T - 0 0 51 205 11 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTT
59 59 A e - 0 0 45 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
60 60 A b B +B 84 0B 35 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
61 61 A V - 0 0 104 205 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
62 62 A A - 0 0 4 204 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
63 63 A K S S+ 0 0 141 205 10 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
64 64 A S B S-C 81 0C 52 204 75 SSSSSSSSSSSSAATAASASAASAATAAAAAAASAAAAAAAAAAAAAAAAAAAASEEATAASAAAAAAEA
65 65 A Y - 0 0 147 165 73 YYYYYYYYLLLLFYFYFFFFFFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFVVFYFFFFFFFFFFF
66 66 A N - 0 0 91 181 76 NNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTKKTTTITTTTTTIKT
67 67 A R - 0 0 126 201 78 RRRRRRRMRRRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRRKKKRKKKKKKRQK
68 68 A V - 0 0 26 196 84 VVVVVVVVVVVVAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVVAAAVTIIIIIVVI
69 69 A T - 0 0 71 195 52 TTTTTTTTMMMMTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAL.TTTTTTTTTTTLT
70 70 A V B >> +D 74 0D 13 201 69 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVLVLVVVVVLLL.LVVL
71 71 A M T 34 S- 0 0 90 205 69 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMNVMMTMLKKKLKMNK
72 72 A G T 34 S- 0 0 90 205 60 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDDNGGGGGDDDKDGDD
73 73 A G T <4 S+ 0 0 34 205 64 GGGGGNGSNNSSNNNNNNNNNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNNNNNNVDNNNNYNNNDNNIN
74 74 A F B < -D 70 0D 113 188 61 FFFFFFFLVVVVTIAIAAAAATAATAAAAAAVAAAAAAAVVTVVVVAAAAVVAALKVAIVIAVVVVVI.V
75 75 A K + 0 0 128 202 47 KKKKKKKRRRRRKRKRKRKRKKRKKKKKRRKKKRKKRRRRKKRRRRKRKRRRKRKLKRKRKRKKKKKKKK
76 76 A V > - 0 0 6 203 26 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVLVVVLVIIIIILLI
77 77 A E T 3 - 0 0 56 202 80 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE.VEEEEEEEEEEEVE
78 78 A N T 3 - 0 0 21 204 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
79 79 A H < + 0 0 20 204 1 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
80 80 A T S S+ 0 0 79 204 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
81 81 A A B -C 64 0C 32 204 31 AAAAAAAAQQQEDEEEEEEDEEDEDEEEEEEEDEEEEEEDEDEEEDEEEEEEEEDDDEEDQEEDDEDQDD
82 82 A c - 0 0 34 203 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
83 83 A H - 0 0 63 203 13 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHHYHH
84 84 A d B +B 60 0B 34 203 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
85 85 A S + 0 0 51 203 10 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
86 86 A T + 0 0 89 201 2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
87 87 A e + 0 0 73 201 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
88 88 A Y S S- 0 0 171 198 9 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
89 89 A Y - 0 0 194 198 15 YYYYYFYFYYYYYHYHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHYYYYYYYHYYYHYHYYYYYYHYY
90 90 A H + 0 0 141 196 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
91 91 A K 0 0 203 196 2 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
92 92 A S 0 0 141 126 4 SSSSSSSS S S SSSSSSSSSSSSSSS SSSSSS SSSSSSS SSSSSSSSSSS S SSSSS SS
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A A 0 0 134 9 80
2 2 A P + 0 0 133 15 45 A A
3 3 A D - 0 0 130 16 49 A A
4 4 A V - 0 0 105 67 42 MMMMM MMMMM M M M M MMA T
5 5 A Q - 0 0 170 95 19 QQQQQ QQQHQ Q Q Q Q Q Q L Q Q QQP Q
6 6 A D - 0 0 149 134 24 GGGGG GGGGGGD G GGG G GG GG D G GG GG G GGGG G G GGGG
7 7 A a - 0 0 60 204 1 CCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A P - 0 0 71 204 63 PPPPPEEPPPPPEPEEPEEPHDEE EPDEDPEEPEPEEEPEEEEEEPDEEEEPPEPTPEEEDHEPEPEEE
9 9 A E - 0 0 97 205 10 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEGZEEEDEEEEEEEEEEEE
10 10 A b S S+ 0 0 13 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A T - 0 0 74 205 53 KKKKKKEKKKKKKKKKKKKKKRKKKKKKKRKKKKKRKKKKKKKKKKKRKKKKRKKKKRKKKRKKRTRTTT
12 12 A L - 0 0 46 205 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A Q - 0 0 90 205 50 GGGKGKKGGGGGKKKKKKKKKQKKKKKRKQKKKKKKKKKKKKKKKKKQKRKKRKKGRKKKKKKKKKKKKK
14 14 A E - 0 0 104 205 57 EEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEVEEEEEEEEEEEEEEEEEEEQEELEEEEDEMEPEPPP
15 15 A N > - 0 0 8 205 5 NNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNNNNNNNNNNNNN
16 16 A P T 4 S+ 0 0 118 205 73 RRRRRNNRRRRRNKNNKNNSKKNNNNTNNKKNNKNLNNSKNNNNNNTNNTNNKKNRSTNKNKKELTKTTT
17 17 A F T 4 S+ 0 0 106 205 64 FFFYFIIFFFFFIYIIYIIYYIIIIIYIIILIIYIRIIIYIIIIIIYIIVIIFYIFRRIVIFYRRIYIII
18 18 A F T 4 S+ 0 0 50 205 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFFFF
19 19 A S < + 0 0 54 205 16 SSSSSSSSSSSSSSSSSSSTSSSSSSTSSSSSSSSSSSSSSSSSSSTSSSSSSSSSSSSSSSSSSPSPPP
20 20 A Q B > -A 23 0A 117 205 47 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKMKKKKNKKKRKKKKKKKKKRKKKKKKHRKNKKKKNNRNNN
21 21 A P T 3 S+ 0 0 136 205 86 PPPPPPPPPPPPPLPPLPPrPPPPPPrPPPLPPLPMPPPAPPPPPPrPPPPPILPPLTPPPPPPMIAIII
22 22 A G T 3 S+ 0 0 76 164 35 GGGAGGGGGGGGGGGGGGGgGSGGGGgGGSGGGGGgGGGGGGGGGGgSGGGGGGGGGGGGGSGGgMGMMM
23 23 A A B < +A 20 0A 23 191 69 AAAAAAAAAAAAAVAAAAAaTAAAAAaAAADAAVAgAAAAAAAAAAaAAAAAFAAAAVAAAATAg.V...
24 24 A P - 0 0 66 196 8 PPPPPPPPPPPPPPPPPPPMPPPPPPLPPPPPPPPRPPPPPPPPPPLPPPPPPPPPPPPPPPPPR.P...
25 25 A I - 0 0 4 196 14 IIIIIVVIIIIIVIVVIVVIIIVVVVIVVIIVVIVIVVVIVVVVVVIIVVVVIIVIIIVVVIIVI.I...
26 26 A L - 0 0 21 197 9 YYYYYYYYYYYYYYYYYYYXFFYYYYFYYFYYYYYYYYYYYYYYYYFFYYYYYYYYFFYYYFFYY.F...
27 27 A Q - 0 0 102 205 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQZQQQQQQQQQQQQQQQQ
28 28 A c - 0 0 17 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 29 A M - 0 0 63 205 49 TTTTTMMTTTTTMMMMMMMTVVMMMMTMMVAMMMMSMMMMMMMMMMTVMMMMIMMTTKMTMVVVSTVTTT
30 30 A G + 0 0 35 205 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A a + 0 0 28 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A d - 0 0 10 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A F - 0 0 103 205 0 FFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFFFFYFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFF
34 34 A S + 0 0 69 205 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
35 35 A R - 0 0 156 205 6 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRRRRRRRQRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
36 36 A A + 0 0 54 205 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A Y S S+ 0 0 195 205 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
38 38 A P S S- 0 0 94 205 0 PPPPPPPPPPPPPPPPHPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
39 39 A T - 0 0 116 205 0 TTTTTTTTTTTTTTTTTTTTTTTTPTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
40 40 A P - 0 0 97 205 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
41 41 A L - 0 0 153 205 51 MMMLMLLMMMMVLALLALLVLLLLLLMPLLALLALMLLLALLLLLLMLLLLLAALMMMLLLLLLMLMLLL
42 42 A R + 0 0 232 205 27 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRRR
43 43 A S + 0 0 119 205 36 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
44 44 A K S S- 0 0 133 205 46 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKK
45 45 A K S S+ 0 0 188 205 23 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKKKQKKKKKKKKKKKKKKKQRQQQ
46 46 A T + 0 0 87 205 8 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
47 47 A M + 0 0 177 205 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
48 48 A L - 0 0 67 205 59 LLLSLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
49 49 A V - 0 0 112 205 22 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
50 50 A Q + 0 0 125 205 15 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
51 51 A K S S- 0 0 154 205 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
52 52 A N S S+ 0 0 148 205 1 NNNNNNNNNNNDNNNDNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNN
53 53 A V + 0 0 75 205 4 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
54 54 A T S S+ 0 0 70 205 1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
55 55 A S S S+ 0 0 76 205 1 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
56 56 A E - 0 0 75 205 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEZEEEEEEEEEEEEEEEE
57 57 A S + 0 0 60 205 13 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
58 58 A T - 0 0 51 205 11 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTKTTTTTTTTTTTTTTTTTTTTTTTTTTTTKTTTTT
59 59 A e - 0 0 45 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
60 60 A b B +B 84 0B 35 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
61 61 A V - 0 0 104 205 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
62 62 A A - 0 0 4 204 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
63 63 A K S S+ 0 0 141 205 10 KKKKKKKKKKKKKKKKKKKKKRKKKKKKKRKKKKKKKKKKKKKKKKKRKKKKNKKKKKKKKRKKKKKKKK
64 64 A S B S-C 81 0C 52 204 75 AAASAEEAAAAAEAEEAEEADEEEEEAEEEAEEAETEEEAEEEEEEAEEEE.HAEADLEEEEDETESEEE
65 65 A Y - 0 0 147 165 73 FFFFFFVFFFFFVFVVFVVSFVVVVVSVVVFVVFVQVVFFVVVVVVSVVIVEFFVFFFVGVVFSQGFGGG
66 66 A N - 0 0 91 181 76 TTTTTKKTTTTTKIKKT..TKT.KKKT..TT..I.Y..KT......TT.QKVKT.TTS.K.T.KYESEEE
67 67 A R - 0 0 126 201 78 KKKRKQRKKKKKRRRRKKKRRRKRRRRKKRKKKRKRKKRKKKKKKKRRKRRKKKKKRRKRK..MRRRRRR
68 68 A V - 0 0 26 196 84 IIIVIVVIIIIIVVVVARRVV.R.V.VRR.VRRVRVRRVARRRRRRV.RV.RIARIVVRVR..VVVVVVV
69 69 A T - 0 0 71 195 52 TTTTTLLTTTTTLTLLTVVTN.VV.VTVV.TVVTVTVVIIVVVVVVT.VFVVTTVTTTVVV..ATT.TTT
70 70 A V B >> +D 74 0D 13 201 69 LLLLLVVLLLLLVLVVVLLVL.ILLLVVL.VILLLVLLVVLLLLLLV.IVLLVVLLLLLVIKKTVTITTT
71 71 A M T 34 S- 0 0 90 205 69 KKKMKNNKKKKKKMNDMVVTILVVVVIVVLKVVMVMVVNSVVVVVVILVNVVMMVKKMVDVLRNKKVKKK
72 72 A G T 34 S- 0 0 90 205 60 DDDDDDDDDDDDDGDDGNNDEDNNNNDNNDGNNGNDNNDGNNNNNDDDNNNNAGNDTGNNNDIIDDDDDD
73 73 A G T <4 S+ 0 0 34 205 64 NNNNNIVNNNNNVNVVNDDNnNDDDDNDDNNDDNDNDDVHDDDDDDNNDiDDDNDNNNDIDNNPVGNGGG
74 74 A F B < -D 70 0D 113 188 61 VVVLV..VVVVV.I..AVVLlMVVVVLVVMVVVIVVVV.TVVVVVVLMVpVVTAV FLV.VMQ..FLFFF
75 75 A K + 0 0 128 202 47 KKKKKKRKKKKKKRRKRKKKKKKKKKKKKKRKKRKKKKKRKKKKKKKKKHNKKRR KKKKKKK.KPKPPP
76 76 A V > - 0 0 6 203 26 IIIIILLIIIIILLLLVLLILLLLLLILLLVLLLLILLLVLLLLLLILLVLLIVL IILLLLLLIVIVVV
77 77 A E T 3 - 0 0 56 202 80 EEEEEVVEEEEEVEVVEVVEEEVVVVEVVEEVVEVEVVIEVVVVVVEEVLVVEQV EEVTMEEYETETTT
78 78 A N T 3 - 0 0 21 204 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNN
79 79 A H < + 0 0 20 204 1 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHH
80 80 A T S S+ 0 0 79 204 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTT
81 81 A A B -C 64 0C 32 204 31 DDDEDDDDDDDDDQDDEDDDDDDDDDDDDDEDDQDADDDEDDDDDDDDDDDDEZD DEDEDDDDAEDEEE
82 82 A c - 0 0 34 203 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCC
83 83 A H - 0 0 63 203 13 HHHHHHHHHHHHQYHHHHHHHHHHHHHHHHHHHYHHHHHHHHHHHHHHHHHHTHH HHHWHHHHHHHHHH
84 84 A d B +B 60 0B 34 203 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCRCCC
85 85 A S + 0 0 51 203 10 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSGSS SSSNSSSSSSSSSS
86 86 A T + 0 0 89 201 2 TTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTT
87 87 A e + 0 0 73 201 0 CCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCC
88 88 A Y S S- 0 0 171 198 9 YYYYYYYYYYYYYYY YYYYYYYYYYYYYYYYYYLYYYYYYYYYYYYYYYYYYY YYYYYYYYLYYYYY
89 89 A Y - 0 0 194 198 15 YYYHYYYYYYYYYHH YYYYYYYYYYYYYYYYHYYYYHYYYYYYYYYYYYYYYY YYYHYYYYYYYYYY
90 90 A H + 0 0 141 196 0 HHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHPHHHHHHHHHHHHHHHH HHHHHHHHHHHHHH
91 91 A K 0 0 203 196 2 KKKKKKKKKKKKKKK KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK KKKKKKKKKKKKKK
92 92 A S 0 0 141 126 4 SSSSSSSS SSSS S SSSS SSSSS S S SSSS SSSSSSSS SSSSSS SSSS STSSSSSSS
## ALIGNMENTS 141 - 204
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A A 0 0 134 9 80 N
2 2 A P + 0 0 133 15 45 GP A
3 3 A D - 0 0 130 16 49 NS D
4 4 A V - 0 0 105 67 42 M MN F
5 5 A Q - 0 0 170 95 19 Q Z Q Q Q AM Q Q
6 6 A D - 0 0 149 134 24 G GGGG G GG GG G G G DGD GGD G GGKG GD D
7 7 A a - 0 0 60 204 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCSCCCCCS
8 8 A P - 0 0 71 204 63 EEEEHEEPEEEEEEEDEEEEEEEHEEEEEMEEEEEEEEEPEMEMEGEPEEGTEEGEECEEETNS
9 9 A E - 0 0 97 205 10 EEEEEEEZEEAEEAEEAEEEEAEEEAEEEEEEEEEEEEEEEEEEEEEEEEEEEEESEEEKEEER
10 10 A b S S+ 0 0 13 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A T - 0 0 74 205 53 TKTTKTKKKKTTTTTTTTTTTTTKTTTTKRTTTTTTTTTRTRARTSTKTSTKTTSTKETTSKAT
12 12 A L - 0 0 46 205 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
13 13 A Q - 0 0 90 205 50 KKKKKRKKKKRTTRRKRRTTKRRKRRRRREKRRRRRRRRKREREKGRSRKRTKRGGRVRRRTKR
14 14 A E - 0 0 104 205 57 PEPPLQEZEEKKKKKRKKKKKKKLKKKKLKKKKKKKKKKEKKKKKLKLRKRLRKLKKKRKKLKT
15 15 A N > - 0 0 8 205 5 NNNNNNNBNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNS
16 16 A P T 4 S+ 0 0 118 205 73 TNTTKPKKKKTSSTSTTSSSSTNKSTSSSSNSSNSTNNSIKSSSNRSMIGPTTSRDSNNHSTDT
17 17 A F T 4 S+ 0 0 106 205 64 IIIIYFVYVLVGGVVIVVGGVVVYVVVVVIVVVLVVVLVYIILIVVVRFPLRYLLLLFLLFRFF
18 18 A F T 4 S+ 0 0 50 205 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFMFFFVFFFFFFFFYMFL
19 19 A S < + 0 0 54 205 16 PSPPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSPSSSSPSSTSR
20 20 A Q B > -A 23 0A 117 205 47 NKNNTRNKNNRRRRRKRRRRRRRTRRRRRRRRRRRRRRRKMRIRRRRETRRQRNRLRKNRRGRE
21 21 A P T 3 S+ 0 0 136 205 86 IPIIPDPLPPDDDDDDDDDDDDDpDDDDDEDDDDDDDDDLDEEEDDDlDEElDVDYDRIEDlDl
22 22 A G T 3 S+ 0 0 76 164 35 MGIMR.GGGG...R.S.......d.....G.........G.G.GR..n...r...G.D...r.k
23 23 A A B < +A 20 0A 23 191 69 .A..DRAAAARRR.R.RRRRRRR.RRRRRKRRRRRRRRRARKRK.RRrRRRrR.R.RA.HRrKh
24 24 A P - 0 0 66 196 8 .P..PPPPPPPPPPPPPPPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPPPPPP.PPPP.PPPPH
25 25 A I - 0 0 4 196 14 .V..IVVIVVIIIIIIIVIIVIIIVIVVIVIVVVVVVVVIVVLVIIVIIVVVV.LVII.VIVVV
26 26 A L - 0 0 21 197 9 .Y..FYYYYYYYYYYYYYYYYYFFYYYYYYYYYYYYYYYYYYYYYYYYFYYYFYYYYYYYFYYL
27 27 A Q - 0 0 102 205 0 QQQQQQQZQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
28 28 A c - 0 0 17 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 29 A M - 0 0 63 205 49 TMTTVMTMTTMMMMMMMMMMMMMVMMMMMIMMMMMMMMMMMIMIMMMVVSMAMMMQMMMKMAKA
30 30 A G + 0 0 35 205 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A a + 0 0 28 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCY
32 32 A d - 0 0 10 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
33 33 A F - 0 0 103 205 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
34 34 A S + 0 0 69 205 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
35 35 A R - 0 0 156 205 6 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRKRQRRRKRRRRRMR
36 36 A A + 0 0 54 205 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
37 37 A Y S S+ 0 0 195 205 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYYYFYYYYYFYYYYFYYYYYYYY
38 38 A P S S- 0 0 94 205 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
39 39 A T - 0 0 116 205 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
40 40 A P - 0 0 97 205 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
41 41 A L - 0 0 153 205 51 LLLLLLLALLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALLLLLQLMLLLMLLQLLLLLLMHP
42 42 A R + 0 0 232 205 27 RRRRRKQRQQKKKKKKKKKKKKKRKKKKGRKKKRKKKRKRKRKRKTKRKRRRKKTTKRKKKRWS
43 43 A S + 0 0 119 205 36 SSSSSSSSSSAAAAASAAAAAAASAAAASAAAAAAAAAASAAAAAAASAASSAAATTSAATSIV
44 44 A K S S- 0 0 133 205 46 KKKKKMKKKKMMMMMIMMMMMMMKMMMMMMMRMTMMMMMKMMMMMMMKMMKKMMILIKMMMKKM
45 45 A K S S+ 0 0 188 205 23 QKQQKKKKKKKTTKKVKKTTKKKKKKKKKQKKKKKKKKKKKQKQKQKKNKEKKKQEKERQRKKD
46 46 A T + 0 0 87 205 8 TTTTTTATAATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTASTTTTTTTTTSLS
47 47 A M + 0 0 177 205 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
48 48 A L - 0 0 67 205 59 LLLLLTLLLLTTTTTPTTTTTTTLTTTTMTTTTNTPTNTLTTPTTATPAAIPANAETPNPSPMI
49 49 A V - 0 0 112 205 22 VVVVVIVVVVIIIIIVIIIIIIIVIIIIIVIIIIIIIIIVIVNVIIIVTNVVTNISIVNIVVNS
50 50 A Q + 0 0 125 205 15 PPPPPPPPPPPPPPPRPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTPPPPRKPPPPPPP
51 51 A K S S- 0 0 154 205 0 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
52 52 A N S S+ 0 0 148 205 1 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
53 53 A V + 0 0 75 205 4 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
54 54 A T S S+ 0 0 70 205 1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTITTTTTTTTTTTTTTTTT
55 55 A S S S+ 0 0 76 205 1 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
56 56 A E - 0 0 75 205 0 EEEEEEEZEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEE
57 57 A S + 0 0 60 205 13 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
58 58 A T - 0 0 51 205 11 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTKTKTTKTTTTTTKAL
59 59 A e - 0 0 45 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
60 60 A b B +B 84 0B 35 205 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
61 61 A V - 0 0 104 205 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVTV
62 62 A A - 0 0 4 204 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA.AAAAAAAAAAAAAAAAAAA
63 63 A K S S+ 0 0 141 205 10 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKRKKKKKKAKKRKKSRKKKRKKKKKRRS
64 64 A S B S-C 81 0C 52 204 75 EEEEDHEAEEHQQHNsHHQQHHHDHHHHHHHHHHHHHHHAHhHhKHHAHHrAHHHSHNHHhASS
65 65 A Y - 0 0 147 165 73 GVGGFSGFGG...V.e.......F...............F.e.eH..F..pF.S....S.yF..
66 66 A N - 0 0 91 181 76 E.EE.YETEEVSSYSVVSSSSVSKSVSSSSSSSSSSSSSTSFGFSSSKSSTKSYSSSPYSQRS.
67 67 A R - 0 0 126 201 78 RKRR.ARKRRYYY.YQYYYYYYYRYYYYYHYYYYYYYYYKYLYLYYYQYYKEYKYYHKKYVEEW
68 68 A V - 0 0 26 196 84 VRVV.TVAVVEQQEEVEEQQEEEIEEEEEEEEEEEEEEEKEFEFEEEAEEVVETEEEDTEHVLT
69 69 A T - 0 0 71 195 52 TVTT.E.TVVTTTTTQTTTTTTTNTTTTTTTTTITTTIIITQTQTTTPTTTFIETVIVETLFVQ
70 70 A V B >> +D 74 0D 13 201 69 TLTTKVVVVVEEEEETEEEEVEEQEEEEKIEEEEEEEEEQMTETEKEIEELIEVKVRIVEQIKL
71 71 A M T 34 S- 0 0 90 205 69 KVKKRAVMDDVVVVVLVVVVVVVKVVVVFEVVVIVVVIVHVIVIVVVPVVGPVAVVIIAVTPVK
72 72 A G T 34 S- 0 0 90 205 60 DNDDIGDGNNAAAAASAAAAAAALAAAAGHAAAAAAAAASSEFEADANARNNAGDANDGAENQI
73 73 A G T <4 S+ 0 0 34 205 64 GDGGNINBIIGGGGGaGGGGGGGEGGGGDTGGGGGGGGGIGhGhGDGhAGgdGIDGDgIGmdNh
74 74 A F B < -D 70 0D 113 188 61 FVFFQ.IA..IIIIIiIIIIIII.IIIIIIIIIIIIIIITIiIiIIItIIerI.IIIs.IirLv
75 75 A K + 0 0 128 202 47 PRPPKKKRKKRKKRRPRKKKSRR.KRRRTPRRRKRRRKRAPPRPRTRKKPLKRITVTIIRPKMT
76 76 A V > - 0 0 6 203 26 VLVVLVLVLLVVVVVVVVVVVVV.VVVVLVVVVVVVVVVLVVVVVVVIVVVILVVVLWVVLIVI
77 77 A E T 3 - 0 0 56 202 80 TVTTERTZTTRRRRRKRRRRRRR.RRRRRRRRRRRRRRRDKRRRRRRERRKEKKRRRKKKRERY
78 78 A N T 3 - 0 0 21 204 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNHNNNNNNNNNNNNNNNNNNNNNNNN
79 79 A H < + 0 0 20 204 1 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHHHHHHHHHQHHHHHHHHHHHHH
80 80 A T S S+ 0 0 79 204 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTPTTTTTTTTTTTTTTTTTTTTTTTT
81 81 A A B -C 64 0C 32 204 31 EDEEDQEZEEDEEDDEDDEEDDDDDDDDEEDDDDDDDDDTMEEEDEDDEEADEDEDDDDDEDEA
82 82 A c - 0 0 34 203 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCC
83 83 A H - 0 0 63 203 13 HHHHHHWHWWHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHYHHHHYS
84 84 A d B +B 60 0B 34 203 1 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCC
85 85 A S + 0 0 51 203 10 SSSSSSNSNNSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSHSSSHSSSSGSSSSDG
86 86 A T + 0 0 89 201 2 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTTTTTTTTSTTT TP
87 87 A e + 0 0 73 201 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCC CC
88 88 A Y S S- 0 0 171 198 9 Y YYYYYYYYYYYYYYYYYYYYYYYYYYYY YYYYYYYY YYYYYYHYYYRYYYYKYHYFY IY
89 89 A Y - 0 0 194 198 15 Y YYYYHYHHYYYYFYYFYYFYFYFYFFFY FFFFFFFF FYFYFYFYHFYYYFYYYYFFF YY
90 90 A H + 0 0 141 196 0 H HHHHHHHHHHHHHHHHHHHHHHH HHHH HHHHHHHH HHHHHHHHHHHHHHHHHHHHH HH
91 91 A K 0 0 203 196 2 K KKKKKKKKKKKKKKKKKKKKKKK KKKK KKKKKKKK KKKKKKKKKKRKKKKKKKKKK KQ
92 92 A S 0 0 141 126 4 S SST SSSS T S S S S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 78 0 11 0 0 0 0 0 0 0 11 0 9 0 0 0.684 22 0.19
2 2 A 0 0 0 0 0 0 0 7 20 73 0 0 0 0 0 0 0 0 0 0 15 0 0 0.730 24 0.54
3 3 A 0 0 0 0 0 0 0 6 13 0 6 0 0 0 0 0 0 0 6 69 16 0 0 1.037 34 0.51
4 4 A 18 1 1 73 1 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 67 0 0 0.913 30 0.57
5 5 A 0 1 2 1 0 0 0 0 1 1 0 0 0 2 0 0 91 0 0 0 95 0 0 0.444 14 0.80
6 6 A 1 0 0 0 0 0 0 78 0 0 1 0 0 0 0 1 0 3 0 16 134 0 0 0.702 23 0.75
7 7 A 0 0 0 0 0 0 0 0 0 0 1 0 99 0 0 0 0 0 0 0 204 0 0 0.055 1 0.98
8 8 A 0 0 0 1 0 0 0 1 0 47 0 1 0 2 0 0 0 42 0 3 204 0 0 1.164 38 0.37
9 9 A 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 94 0 1 205 0 0 0.301 10 0.90
10 10 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 0 1 0 2 26 0 0 6 63 0 1 0 0 205 0 0 1.007 33 0.46
12 12 A 0 98 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 205 0 0 0.096 3 0.95
13 13 A 0 0 0 0 0 0 0 9 0 0 0 3 0 0 20 59 6 1 0 0 205 0 0 1.268 42 0.50
14 14 A 0 4 0 0 0 0 0 0 0 3 0 0 0 0 2 20 1 66 0 0 205 0 0 1.086 36 0.43
15 15 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 97 0 205 0 0 0.132 4 0.95
16 16 A 0 1 1 0 0 0 0 0 0 5 13 11 0 0 10 36 0 0 21 1 205 0 0 1.820 60 0.26
17 17 A 13 6 24 0 18 0 32 2 0 0 0 0 0 0 4 0 0 0 0 0 205 0 0 1.686 56 0.35
18 18 A 0 1 0 1 97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.171 5 0.96
19 19 A 0 0 0 0 1 0 0 0 0 4 91 3 0 0 0 0 0 0 0 0 205 0 0 0.396 13 0.83
20 20 A 0 0 0 1 0 0 0 0 0 0 0 1 0 0 24 58 5 1 7 0 205 0 0 1.255 41 0.53
21 21 A 0 25 4 1 0 0 0 0 1 43 0 0 0 0 2 0 0 3 0 19 205 41 8 1.545 51 0.14
22 22 A 0 0 1 4 0 0 0 82 1 0 3 0 0 0 3 1 0 0 1 6 164 12 9 0.794 26 0.65
23 23 A 4 0 0 0 1 0 0 1 66 0 1 2 0 1 21 2 0 0 1 1 191 0 0 1.112 37 0.30
24 24 A 0 1 0 1 0 0 0 0 0 96 0 0 0 1 1 0 1 0 0 0 196 0 0 0.209 6 0.92
25 25 A 38 1 61 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 196 0 0 0.715 23 0.85
26 26 A 0 5 0 0 10 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 197 0 0 0.513 17 0.90
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 205 0 0 0.010 0 1.00
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
29 29 A 6 0 2 69 0 0 0 0 2 0 2 16 0 0 0 2 0 0 0 0 205 0 0 1.078 35 0.51
30 30 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.031 1 0.99
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
33 33 A 0 0 0 0 98 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.107 3 1.00
34 34 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 1 2 0 0 0 205 0 0 0.212 7 0.94
36 36 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
37 37 A 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.115 3 1.00
38 38 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 205 0 0 0.031 1 0.99
39 39 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 205 0 0 0.031 1 0.99
40 40 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
41 41 A 2 57 0 12 0 0 0 0 26 1 0 0 0 0 0 0 1 0 0 0 205 0 0 1.173 39 0.48
42 42 A 0 0 0 0 0 0 0 0 0 0 0 1 0 0 78 18 1 0 0 0 205 0 0 0.730 24 0.73
43 43 A 0 0 0 0 0 0 0 0 20 0 78 1 0 0 0 0 0 0 0 0 205 0 0 0.626 20 0.64
44 44 A 0 0 1 20 0 0 0 0 0 0 0 0 0 0 2 73 2 0 0 0 205 0 0 0.844 28 0.54
45 45 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 86 7 2 0 0 205 0 0 0.603 20 0.76
46 46 A 0 0 0 0 0 0 0 0 2 0 1 96 0 0 0 0 0 0 0 0 205 0 0 0.203 6 0.91
47 47 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
48 48 A 0 73 1 1 0 0 0 0 2 4 1 15 0 0 0 0 0 0 2 0 205 0 0 0.982 32 0.41
49 49 A 79 0 17 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 2 0 205 0 0 0.665 22 0.78
50 50 A 0 0 0 0 0 0 0 0 0 92 0 0 0 0 1 0 5 0 0 0 205 0 0 0.385 12 0.85
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 205 0 0 0.000 0 1.00
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 1 205 0 0 0.076 2 0.99
53 53 A 8 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 205 0 0 0.286 9 0.95
54 54 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 205 0 0 0.031 1 0.99
55 55 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 205 0 0 0.031 1 0.99
56 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 205 0 0 0.040 1 1.00
57 57 A 0 0 0 0 0 0 0 0 91 0 9 0 0 0 0 0 0 0 0 0 205 0 0 0.309 10 0.86
58 58 A 0 0 0 0 0 0 0 0 0 0 1 95 0 0 0 3 0 0 0 0 205 0 0 0.269 8 0.88
59 59 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
60 60 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 205 0 0 0.000 0 1.00
61 61 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 205 1 0 0.031 1 0.99
62 62 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 204 0 0 0.000 0 1.00
63 63 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 5 93 0 0 0 0 205 1 0 0.324 10 0.89
64 64 A 0 0 0 0 0 0 0 0 34 0 12 2 0 19 0 0 2 25 1 2 204 40 5 1.670 55 0.24
65 65 A 22 2 1 0 51 0 8 7 0 1 4 0 0 1 0 0 1 2 0 0 165 23 0 1.526 50 0.27
66 66 A 3 0 2 0 1 0 3 1 0 1 20 45 0 0 1 11 1 6 5 0 181 2 0 1.732 57 0.23
67 67 A 0 1 0 1 0 0 18 0 0 0 0 0 0 1 27 47 2 1 0 0 201 6 0 1.373 45 0.22
68 68 A 29 1 9 0 1 0 0 0 26 0 0 3 0 1 11 1 2 18 0 1 196 4 0 1.806 60 0.16
69 69 A 16 4 4 2 2 0 0 0 1 1 0 66 0 0 0 0 2 2 1 0 195 1 0 1.237 41 0.47
70 70 A 45 23 5 0 0 0 0 0 0 0 0 5 0 0 0 3 1 15 0 0 201 0 0 1.525 50 0.30
71 71 A 31 3 4 34 0 0 0 0 1 1 0 1 0 0 1 14 0 0 4 2 205 0 0 1.818 60 0.31
72 72 A 0 0 2 0 0 0 0 36 16 0 1 0 0 0 0 0 0 2 17 23 205 0 0 1.694 56 0.39
73 73 A 3 0 5 0 0 0 0 24 1 0 1 0 0 3 0 0 0 0 42 17 205 16 12 1.610 53 0.36
74 74 A 31 5 27 2 9 0 0 0 17 1 1 4 0 0 1 1 1 1 0 0 188 0 0 1.809 60 0.38
75 75 A 0 1 1 0 0 0 0 0 0 7 0 2 0 0 30 55 0 0 0 0 202 0 0 1.233 41 0.53
76 76 A 58 27 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 203 1 0 0.980 32 0.74
77 77 A 16 0 0 0 0 0 1 0 0 0 0 5 0 0 20 4 0 50 0 0 202 0 0 1.424 47 0.20
78 78 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 204 0 0 0.031 1 0.99
79 79 A 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 1 0 0 0 204 0 0 0.055 1 0.99
80 80 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 204 0 0 0.031 1 0.99
81 81 A 0 0 0 0 0 0 0 0 6 0 0 0 0 0 0 0 4 36 0 51 204 0 0 1.064 35 0.69
82 82 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 203 0 0 0.000 0 1.00
83 83 A 0 0 0 0 0 2 3 0 0 0 0 0 0 94 0 0 0 0 0 0 203 0 0 0.322 10 0.86
84 84 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 203 0 0 0.031 1 0.99
85 85 A 0 0 0 0 0 0 0 1 0 0 95 0 0 1 0 0 0 0 2 0 203 0 0 0.259 8 0.90
86 86 A 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 201 0 0 0.063 2 0.97
87 87 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 201 0 0 0.000 0 1.00
88 88 A 0 1 1 0 1 0 96 0 0 0 0 0 0 1 1 1 0 0 0 0 198 0 0 0.239 7 0.90
89 89 A 0 0 0 0 14 0 78 0 0 0 0 0 0 9 0 0 0 0 0 0 198 0 0 0.678 22 0.84
90 90 A 0 0 0 0 0 0 0 0 0 1 0 0 0 99 0 0 0 0 0 0 196 0 0 0.032 1 0.99
91 91 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 99 1 0 0 0 196 0 0 0.064 2 0.98
92 92 A 0 0 0 0 0 0 0 0 0 0 98 2 0 0 0 0 0 0 0 0 126 0 0 0.113 3 0.96
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
90 18 50 1 rLg
90 19 52 1 gKa
91 69 101 2 nSNl
97 18 50 1 rLg
97 19 52 1 gKa
106 17 27 1 gIg
117 18 50 1 rLg
117 19 52 1 gKa
120 68 101 1 iKp
135 18 51 1 gIg
156 58 91 2 sSYe
156 67 102 1 aNi
164 18 49 1 pRd
182 60 107 2 hSHe
182 69 118 1 hTi
184 60 107 2 hSHe
184 69 118 1 hTi
188 16 50 1 lFn
188 17 52 1 nGr
188 68 104 2 hEHt
191 59 92 2 rSTp
191 68 103 2 gNTe
192 18 50 1 lFr
192 19 52 1 rGr
192 70 104 2 dGTr
198 73 102 1 gSs
201 59 106 1 hSy
201 68 116 2 mANi
202 18 50 1 lFr
202 19 52 1 rGr
202 70 104 2 dGTr
204 21 44 2 lNHk
204 22 47 1 kLh
204 71 97 1 hSv
//