Complet list of 1hce hssp file
Complete list of 1hce.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1HCE
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-30
HEADER ACTIN BINDING 12-JUL-94 1HCE
COMPND MOL_ID: 1; MOLECULE: HISACTOPHILIN; CHAIN: A; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: DICTYOSTELIUM DISCOIDEUM; ORGANISM_TAX
AUTHOR J.HABAZETTL,D.GONDOL,R.WILTSCHECK,J.OTLEWSKI,M.SCHLEICHER, T.A.HOLAK
DBREF 1HCE A 2 118 UNP P13231 HATA_DICDI 1 117
SEQLENGTH 118
NCHAIN 1 chain(s) in 1HCE data set
NALIGN 36
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : HATA_DICDI 1HCD 1.00 1.00 1 118 1 118 118 0 0 118 P13231 Hisactophilin-1 OS=Dictyostelium discoideum GN=hatA PE=1 SV=3
2 : HATB_DICDI 0.84 0.94 1 118 1 118 118 0 0 118 P42526 Hisactophilin-2 OS=Dictyostelium discoideum GN=hatB PE=1 SV=2
3 : HATC_DICDI 0.75 0.91 1 118 1 119 119 1 1 119 Q54DM0 Hisactophilin-3 OS=Dictyostelium discoideum GN=hatC PE=3 SV=1
4 : F0Z7K8_DICPU 0.73 0.91 1 117 1 117 117 0 0 118 F0Z7K8 Putative uncharacterized protein OS=Dictyostelium purpureum GN=DICPUDRAFT_96363 PE=4 SV=1
5 : E8LX84_9VIBR 0.33 0.48 14 110 107 187 99 7 20 254 E8LX84 Uncharacterized protein OS=Vibrio brasiliensis LMG 20546 GN=VIBR0546_01431 PE=4 SV=1
6 : Q9NES7_CAEEL 0.33 0.50 6 111 620 716 109 6 15 735 Q9NES7 Protein Y39B6A.1 OS=Caenorhabditis elegans GN=CELE_Y39B6A.1 PE=4 SV=1
7 : C7YW28_NECH7 0.32 0.49 4 110 399 491 108 5 16 1514 C7YW28 Predicted protein OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=NECHADRAFT_74161 PE=4 SV=1
8 : D3BAT0_POLPA 0.32 0.45 10 109 455 529 100 6 25 529 D3BAT0 Putative zinc transporter OS=Polysphondylium pallidum GN=PPL_05661 PE=4 SV=1
9 : L8HCW6_ACACA 0.32 0.53 7 105 8 109 102 3 3 124 L8HCW6 PPOD1 peroxidase OS=Acanthamoeba castellanii str. Neff GN=ACA1_069790 PE=4 SV=1
10 : T1KXX8_TETUR 0.32 0.47 2 110 68 169 111 6 11 326 T1KXX8 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
11 : A7SZ86_NEMVE 0.31 0.49 11 110 47 133 100 4 13 153 A7SZ86 Predicted protein (Fragment) OS=Nematostella vectensis GN=v1g4968 PE=4 SV=1
12 : A8XY13_CAEBR 0.31 0.46 2 111 526 634 113 5 7 749 A8XY13 Protein CBG20540 OS=Caenorhabditis briggsae GN=CBG20540 PE=4 SV=1
13 : C1LSS6_SCHJA 0.31 0.39 10 107 74 144 99 5 29 145 C1LSS6 Histidine-rich glycoprotein OS=Schistosoma japonicum PE=2 SV=1
14 : E9IKZ9_SOLIN 0.31 0.45 3 115 395 498 114 6 11 608 E9IKZ9 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_02557 PE=4 SV=1
15 : E9J0S2_SOLIN 0.31 0.44 2 111 18 108 111 6 21 248 E9J0S2 Putative uncharacterized protein (Fragment) OS=Solenopsis invicta GN=SINV_05778 PE=4 SV=1
16 : HRPX_PLALO 0.31 0.45 2 110 214 319 110 4 5 351 P04929 Histidine-rich glycoprotein OS=Plasmodium lophurae PE=4 SV=1
17 : J8MLP8_BACCE 0.31 0.50 2 111 133 235 111 4 9 302 J8MLP8 Uncharacterized protein OS=Bacillus cereus VD166 GN=IK9_00140 PE=4 SV=1
18 : L8GXP8_ACACA 0.31 0.62 7 118 20 134 116 5 5 135 L8GXP8 Hisactophilin II, putative OS=Acanthamoeba castellanii str. Neff GN=ACA1_041980 PE=4 SV=1
19 : N6UME9_DENPD 0.31 0.48 2 110 135 238 114 6 15 264 N6UME9 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=YQE_00718 PE=4 SV=1
20 : N6UMS0_DENPD 0.31 0.48 2 110 135 238 114 6 15 264 N6UMS0 Uncharacterized protein (Fragment) OS=Dendroctonus ponderosae GN=YQE_03567 PE=4 SV=1
21 : R8GRT5_BACCE 0.31 0.50 2 111 133 235 111 4 9 294 R8GRT5 VrrB protein OS=Bacillus cereus VD196 GN=IKE_05322 PE=4 SV=1
22 : T1L3Z4_TETUR 0.31 0.44 4 111 180 280 111 7 13 349 T1L3Z4 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
23 : U4UUC8_DENPD 0.31 0.48 2 110 135 238 114 6 15 568 U4UUC8 Uncharacterized protein OS=Dendroctonus ponderosae GN=D910_11046 PE=4 SV=1
24 : W4GPD3_9STRA 0.31 0.47 2 113 61 147 112 5 25 333 W4GPD3 Uncharacterized protein OS=Aphanomyces astaci GN=H257_05780 PE=4 SV=1
25 : W4WZ37_ATTCE 0.31 0.47 2 111 206 295 110 5 20 300 W4WZ37 Uncharacterized protein OS=Atta cephalotes PE=4 SV=1
26 : Y7791_DICDI 0.31 0.45 9 110 65 153 103 5 15 233 Q8MP30 Uncharacterized histidine-rich protein DDB_G0274557 OS=Dictyostelium discoideum GN=DDB_G0274557 PE=4 SV=1
27 : B5VA39_BACCE 0.30 0.54 5 111 117 217 107 2 6 290 B5VA39 VrrB OS=Bacillus cereus H3081.97 GN=BCH308197_4724 PE=4 SV=1
28 : C7TY65_SCHJA 0.30 0.46 6 111 125 220 110 7 18 236 C7TY65 Histidine-rich glycoprotein OS=Schistosoma japonicum PE=2 SV=1
29 : D4DKB2_TRIVH 0.30 0.50 2 110 128 231 111 5 9 271 D4DKB2 Putative uncharacterized protein OS=Trichophyton verrucosum (strain HKI 0517) GN=TRV_07633 PE=4 SV=1
30 : E3NDK4_CAERE 0.30 0.46 2 111 641 735 111 5 17 800 E3NDK4 Putative uncharacterized protein OS=Caenorhabditis remanei GN=CRE_27851 PE=4 SV=1
31 : F4P809_BATDJ 0.30 0.43 2 109 43 139 111 6 17 332 F4P809 Expressed protein OS=Batrachochytrium dendrobatidis (strain JAM81 / FGSC 10211) GN=BATDEDRAFT_37246 PE=4 SV=1
32 : J2W761_9BRAD 0.30 0.46 9 110 95 160 104 5 40 969 J2W761 Ribonuclease, Rne/Rng family (Fragment) OS=Bradyrhizobium sp. YR681 GN=PMI42_01886 PE=3 SV=1
33 : Q26056_PLALO 0.30 0.44 9 111 1 93 104 5 12 140 Q26056 Histidine-rich protein (Fragment) OS=Plasmodium lophurae PE=2 SV=1
34 : Q4XGP3_PLACH 0.30 0.46 7 112 62 158 107 4 11 160 Q4XGP3 Pc-fam-3 protein putative (Fragment) OS=Plasmodium chabaudi GN=PC401699.00.0 PE=4 SV=1
35 : T1K478_TETUR 0.30 0.44 9 110 27 112 102 7 16 116 T1K478 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
36 : T1L412_TETUR 0.30 0.45 4 111 177 277 111 7 13 340 T1L412 Uncharacterized protein OS=Tetranychus urticae PE=4 SV=1
## ALIGNMENTS 1 - 36
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 173 5 0 MMMM
2 2 A G E +A 36 0A 7 19 27 GGGG G G SPG GGG GGD GGP
3 3 A N E S+A 35 0A 52 20 61 NNNN K T HAHH HHH HHH DHK
4 4 A R E S-A 34 0A 83 23 46 RRRR H Q H ERHH HHHHHHH HHS H
5 5 A A E -D 116 0B 7 24 62 AAAA D Q G DDHH GGHGGHG G DAD G
6 6 A F E -DE 115 14B 15 26 76 FFFF YH A H HVHH HHHHHRK FYDHF H
7 7 A K E -DE 114 13B 71 29 70 KKKK GK KH H HRHQRKKQKKHK YGHGV H K
8 8 A S - 0 0 19 29 76 SAST AE TH A ESHGSHHGHHPG GHDEG A H
9 9 A H S > S+ 0 0 109 33 30 HHHH HH HH H KMHHAHHHGHHHHHHHHHHHHHD
10 10 A H T 3 S- 0 0 122 35 26 HNHH HHHHH HHHYHHSHHHHHHHHHHHHHEHGHH
11 11 A G T 3 S+ 0 0 21 36 52 GGGG GGGGHGSGGGGGGKKGDKHDPGHGTGGHEGD
12 12 A H < - 0 0 53 36 47 HHHH HHHKHHPYHDHHHKKHHKHKHHHKAHEHHHH
13 13 A F E -EF 7 24B 28 36 84 FYFY HHAYGHAYKLHHYGGHKGHGHHHGHEHHHHK
14 14 A L E +EF 6 23B 7 37 76 LLLLLGHHLHLHHHEHGLQQGHQHHLDIMHHLHHHH
15 15 A S E - F 0 22B 18 37 84 SSSAGAGSCNLHRKVHHVHHHGHHYHGRNAHHAHGG
16 16 A A E + F 0 21B 12 37 71 AAAAAHHHAHHGHHAHHGTTHHTDDHHHAPGAPGHH
17 17 A E E > - F 0 20B 86 37 64 EEEEDHHKEGDEYDSHHEKKHKKDEHHHRHHDHEHK
18 18 A G T 3 S- 0 0 66 37 64 GHDHKHHQpHHhgHSHHDGGHHGEDHGHgHGAHHHH
19 19 A E T 3 S+ 0 0 171 17 77 EDCD....h..gc....GHH..HY.HH.r....H..
20 20 A A E < S-F 17 0B 37 22 68 AHKH....T..HHH.H.VHH.DHS.HH.D...HE.D
21 21 A V E +F 16 0B 41 23 77 VVVL.H..V..HHE.H.III.HIP.HH.H...HH.H
22 22 A K E -F 15 0B 108 31 81 KKKKHAG.V.HAHE.GQRKKQWKH.HQHD.H.HHGW
23 23 A T E +F 14 0B 56 34 77 TTTTDPHKG.HPRHHHGPKKGHKH.HGRD.HEHGHH
24 24 A H E -F 13 0B 81 37 40 HHHHHHHHNHLHHHHHHEHHHKHHHHHYHEGHHHKK
25 25 A H - 0 0 128 37 38 HHHHDHHHRHHHHHHHHSKKHHKHHHHHDHGHHHHH
26 26 A G S S+ 0 0 25 37 52 GGGSEEGDDGGEGGGHGHDDGGDDGHVHGGPGAEGG
27 27 A H + 0 0 133 37 34 HHHHHHHHAHHHCHHHHHEEHHEHHHHHHTHEPHHH
28 28 A H S S- 0 0 132 37 35 HHHHHHEDANHGHHHHHHHHHKHHHHHHDHHHHHHK
29 29 A D - 0 0 110 37 64 DDDDDEHDAHHTHEHHGGHHGHHDGHGGDGGDHLHH
30 30 A H + 0 0 107 37 58 HHHHHHHHAHLHHHGHHDKKHGKHKHHHDHHGHHGG
31 31 A H S S+ 0 0 146 37 15 HHHHDHNHWHHHHHHHHHHHHHHHHHHHHHHHHHHH
32 32 A T + 0 0 28 37 73 TTTAKGKDEGGGHKHGGGHHGDHHGHHHDTEDHAKD
33 33 A H - 0 0 47 37 36 HHHHHDHHHHHHHHHHHIKKHHKHHHHHHAGHHHHH
34 34 A F E -A 4 0A 16 37 89 FFFFDHHDRNHHGGEHHFFFHKFHEHQFDHPHHGSK
35 35 A H E -AB 3 46A 47 37 50 HHHHHHHHEHHGHHHHQIYYQHYHEHGDHHHEHEHH
36 36 A V E +AB 2 45A 10 37 80 VIVVEHGHVGLEHHGHQIDDQGDHHHHHHGHHAHGG
37 37 A E E - B 0 44A 83 37 61 EEEEEGHDIHHHHEGHQKDDQHDEHHHHHEGDPHHH
38 38 A N E - B 0 43A 100 37 65 NNNRHSHHKKDHHDGHVHHHVKHDHHGHHHHHHHGK
39 39 A H E > - B 0 42A 69 37 22 HHHHHHHDLHHHHHHHHLHHHHHDHHHHHHHHHHHH
40 40 A G T 3 S- 0 0 86 37 67 GGgGdGGDgGHAGHEHhyHHhDHDHHHHNAGDhGGD
41 41 A G T 3 S+ 0 0 71 15 64 GShDd...gH......gd..g.....G.K...hE..
42 42 A K E < S-B 39 0A 84 17 76 KKKKK...KWH....HHV..H.....H.S...HH..
43 43 A V E -BC 38 74A 23 20 78 VVVIH...VHLP...DHV..HQ....H.V...HH.H
44 44 A A E -B 37 0A 2 22 79 AAAAD...YEHA...AHE..HS...PHGK...HE.S
45 45 A L E +B 36 0A 7 27 78 LLILHV..LHDH.HHHII..IH.F.HHYA...AHHH
46 46 A K E -B 35 0A 62 30 59 KRRREHH.KKHH.KHHHK..HK.REHQHRH..PHNK
47 47 A T B >> -G 51 0C 32 34 75 TTTTEhH.ShHG.hsHPnggPhgPDpGhGgg.HgSh
48 48 A H T 34 S+ 0 0 132 31 15 HHHH.hH.AhHH.hhHQhhhQhh.HhHhHhh.Hh.h
49 49 A C T 34 S- 0 0 109 32 78 CCAH.HG.HGLH.EHHASHHADH.GHHRGHH.HEWD
50 50 A G T <4 S+ 0 0 18 33 71 GGNG.GHHGHHA.HGHVGGGVHG.KPGHGHE.HHGH
51 51 A K B < -G 47 0C 85 33 70 KKKK.TKHKKDP.KEHLKKKLKK.KHHGHAH.HHGK
52 52 A Y E -H 64 0D 29 33 56 YYYY.HHDYHHH.HHHYYHHYHH.HHHYWPH.HLWH
53 53 A L E -H 63 0D 19 34 81 LVVV.HGHLDHHHGGDQVGGQGG.EHGHDHG.HHGG
54 54 A S E -H 62 0D 0 35 74 SSSSHSHDSHHEHHEAIADDIHD.HHHHDHG.HHGH
55 55 A I E -H 61 0D 9 35 86 IIIIHLEHAKLHHKEHHIHHHKH.HHHHDGP.AAWK
56 56 A G - 0 0 19 36 65 GGNGDAHHEHHGHEGHQDHHQNHHGPQHDEH.PHGN
57 57 A D S > S+ 0 0 129 36 57 DDDDHHHDTDDTGEHHDDGGDDGHGHQGDHH.HGGD
58 58 A H T 3 S- 0 0 172 35 34 HHNHDHNHNHHHHHKHH.HHHHHHKHQHHHE.HEHH
59 59 A K T 3 S+ 0 0 164 36 76 KKNKKGKDGNHHHHGHHTHHHWHHKHVHDTH.HHTW
60 60 A Q < - 0 0 126 36 64 QQDQHHHNTHHTHHHHGYGGGHGHHHHHDAH.HHGH
61 61 A V E +H 55 0D 56 36 73 VVVVDHHHVGLHCGKHHVHHHHHHGHHHDHG.HHHH
62 62 A Y E -H 54 0D 112 36 67 YYYYHGHDVHHHCHGHHYHHHHHGYHHHDHG.HHSH
63 63 A L E -H 53 0D 55 36 81 LLILEGGHAGGEGHHDGLGGGGGHSHGHHAP.PGGG
64 64 A S E -H 52 0D 38 36 75 SSSSKHHDNHHSHEHAHTEEHHEHSHHHDPH.WEWH
65 65 A H - 0 0 107 36 47 HHHHHGHHRDHHHDHHHHHHHKHHGHHHGHH.FHGK
66 66 A H S S+ 0 0 137 37 47 HHHHHTHDDHHGRHHHGEHHGHHDHHHRHHEHHHGH
67 67 A L - 0 0 59 37 84 LLFFDHGHTKLTHHHHHHKKHEKHGHIHDEHDHEWE
68 68 A H S S+ 0 0 171 37 37 HHHHHHHHPHHHHHHHQHKKQHKHDHHHDHHHHHGH
69 69 A G S S- 0 0 35 37 45 GGGGDggGKGGGGSGhGEggGggGHHPgDGggHHGg
70 70 A D S S+ 0 0 47 33 53 DDEE.he.E.HHCHEhHHhhHdhHHHQh.ThgHGHd
71 71 A H S S+ 0 0 60 35 33 HHHH.HHHWHQHHHHHHNHHHHHHGHAH.HHHHHAH
72 72 A S S S+ 0 0 15 36 74 SSSSKSGSEKNAHQGDGTSSGGSHHHVH.GGDPHAG
73 73 A L S S- 0 0 8 36 85 LLLLHPHHTHLPHDHAHKGGHHGHHHLG.EHDWELH
74 74 A F B -C 43 0A 0 37 82 FFFFDAHDFGHAHHHHHFHHHGHRGHYYDHHHFHSG
75 75 A H E +I 86 0E 78 37 35 HHHHHHHHHHDHHKGHGHHHGHHHHHQHDHGHHHHH
76 76 A L E -I 85 0E 22 36 81 LLLLEHGHVEHHHHKHHMGGHHGGHHIHHGGHHL.H
77 77 A E E -I 84 0E 96 37 61 EEEDEGHDHHHGRHEHHEHHHGHHGHHHHAPAHHGG
78 78 A H E -I 83 0E 131 37 51 HHHHHHKDKKHHHHHHHHGGHWGHHHQHHHHHHHWW
79 79 A H E > -I 82 0E 80 37 32 HHHHHHHHLHLRHHHHHHHHHHHHHHDHHHHDHANH
80 80 A G T 3 S- 0 0 97 37 63 GHGHDGGHGGHDGEEHQQGGQDGHGHQHRAGGHHGD
81 81 A G T 3 S+ 0 0 51 37 67 GGGGhAHGnhGgCAGHGGkkGGkHHHHGGPPDPGGG
82 82 A K E < -I 79 0E 95 18 73 KKKKk...khHh...DHRggH.g.......K.....
83 83 A V E -IJ 78 113E 2 19 83 VVVVH...VGHG...AQVHHQ.H.....I.P.....
84 84 A S E -I 77 0E 2 22 90 SSSFD...HHHV.H.HGAGGG.G.....K.D.W.W.
85 85 A I E +I 76 0E 4 24 92 IIIIH.H.FSLH.K.HHFDDH.D.....SHF.F.G.
86 86 A K E +IK 75 92E 41 28 61 KKKRE.HHKHHH.H.HHRKKH.KHH..HRHV.H.W.
87 87 A G > - 0 0 2 33 47 GGGGE.GSTGDE.G.HGVGGGGGGG.GHGGGQHEGG
88 88 A H G > S+ 0 0 97 36 10 HHHHHHHHHHHHHH.HHKHHHHHHHHHHHEHHHHHH
89 89 A H G 3 S- 0 0 140 37 28 HHNHHHHDHKHGHHHHHYHHHHHHHHHHKHHHHHHH
90 90 A H G < S+ 0 0 118 37 54 HHHHDEHHGHHHHHHHQHDDQGDHGHGHDHGDHHGG
91 91 A H < - 0 0 32 37 48 HHYHHhDHKKLhHKHHQnHHQWHDHHHhhHHHHHHW
92 92 A Y E -KL 86 104E 42 11 50 YYYY.a..Y..h.....y.........yh.......
93 93 A I E - L 0 103E 5 14 89 IIII.H..L..H.....L...N....HHD......N
94 94 A S E - L 0 102E 3 20 73 SSAG.H.DCH.S.E.DQG..QD....GHD......D
95 95 A A E + L 0 101E 17 24 80 AVAV.G.DVG.P.E.AVV..VH..H.HHDV...GQH
96 96 A D E >> - L 0 100E 60 34 62 DDDDDANHEH.A.HEHHHHHHGH.GHGHDAKDDEGG
97 97 A H T 34 S+ 0 0 155 35 42 HGQHKHKHPH.H.KHHHYHHHHHHHHHHHHHDAHHH
98 98 A H T 34 S+ 0 0 173 37 24 HHHHHHHHSHHHHHGHHYHHHHHHHHHHDHHHHHHH
99 99 A G T <4 S- 0 0 26 37 29 GGGGDGGGGGGGGGGHGEGGGGGGGHGGDGGGHHGG
100 100 A H E < -L 96 0E 133 37 16 HHSHHHHHKHHHHHHHHhhhHHhHHHHYHHHHHHHH
101 101 A V E S+L 95 0E 19 16 85 VVIV.HH.V......H.vkk..k...Q..H.V....
102 102 A S E -L 94 0E 24 23 73 SSYR.DH.IH...EKH.HHH.HH..HG..HHG...H
103 103 A T E -L 93 0E 28 27 75 TTTS.DE.AH.H.HKD.AEE.GE..HH.DSKE.GHG
104 104 A K E -L 92 0E 98 32 73 KSTTEKG.DGHG.KGAQHGGQHG.HHQ.DAGH.EGH
105 105 A E S S+ 0 0 117 36 62 EHHHEEY.RHHEHHHHGHHHGDHHGHGHDPPHHHWD
106 106 A H - 0 0 135 36 31 HHHEHNHS QLHHHHHHEHHHHHHHHHHHHHHHHGH
107 107 A H + 0 0 87 36 12 HHHRHHHH HHHHHDHHRHHHHHHHHHHHHHHHHHH
108 108 A D S S- 0 0 76 35 60 DDHGDHGD GDG DEHGTHQGDHRGHGHDGDEHQGG
109 109 A H S > S+ 0 0 100 35 22 HHHHHHHH HHH HHHHEHHHHHHHHHHDERHHKHH
110 110 A D T 3 S+ 0 0 76 33 49 DHDDDHH HHH HDHQAHHQHHDHHQHDH DDNGH
111 111 A T T 3 S+ 0 0 1 21 52 TAAE G A EE GE GG DG GG G AT G
112 112 A T < + 0 0 4 9 80 TTTL H L D T
113 113 A F B -J 83 0E 7 8 35 FFFF H F F
114 114 A E E -D 7 0B 67 7 48 EEEE D T
115 115 A E E -D 6 0B 75 7 31 EEEE H E
116 116 A I E +D 5 0B 42 6 92 IHFI E
117 117 A I 0 0 75 6 0 IIII I
118 118 A I 0 0 166 5 36 ILV L
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 79 0 11 5 0 0 0 0 0 0 0 0 5 19 0 0 0.734 24 0.72
3 3 A 0 0 0 0 0 0 0 0 5 0 0 5 0 50 0 10 0 0 25 5 20 0 0 1.373 45 0.39
4 4 A 0 0 0 0 0 0 0 0 0 0 4 0 0 61 26 0 4 4 0 0 23 0 0 1.062 35 0.54
5 5 A 0 0 0 0 0 0 0 33 25 0 0 0 0 17 0 0 4 0 0 21 24 0 0 1.471 49 0.38
6 6 A 4 0 0 0 27 0 8 0 4 0 0 0 0 46 4 4 0 0 0 4 26 0 0 1.534 51 0.24
7 7 A 3 0 0 0 0 0 3 10 0 0 0 0 0 24 7 45 7 0 0 0 29 0 0 1.539 51 0.30
8 8 A 0 0 0 0 0 0 0 17 14 3 17 7 0 28 0 0 0 10 0 3 29 0 0 1.886 62 0.24
9 9 A 0 0 0 3 0 0 0 3 3 0 0 0 0 85 0 3 0 0 0 3 33 0 0 0.669 22 0.69
10 10 A 0 0 0 0 0 0 3 3 0 0 3 0 0 86 0 0 0 3 3 0 35 0 0 0.640 21 0.74
11 11 A 0 0 0 0 0 0 0 61 0 3 3 3 0 11 0 8 0 3 0 8 36 0 0 1.357 45 0.47
12 12 A 0 0 0 0 0 0 3 0 3 3 0 0 0 69 0 17 0 3 0 3 36 0 0 1.050 35 0.53
13 13 A 0 3 0 0 8 0 14 17 6 0 0 0 0 42 0 8 0 3 0 0 36 0 0 1.711 57 0.15
14 14 A 0 30 3 3 0 0 0 8 0 0 0 0 0 43 0 0 8 3 0 3 37 0 0 1.521 50 0.24
15 15 A 5 3 0 0 0 0 3 16 11 0 14 0 3 32 5 3 0 0 5 0 37 0 0 2.035 67 0.15
16 16 A 0 0 0 0 0 0 0 11 27 5 0 8 0 43 0 0 0 0 0 5 37 0 0 1.476 49 0.29
17 17 A 0 0 0 0 0 0 3 3 0 0 3 0 0 32 3 16 0 27 0 14 37 0 0 1.675 55 0.36
18 18 A 0 0 0 0 0 0 0 24 3 3 3 0 0 51 0 3 3 3 0 8 37 20 4 1.475 49 0.35
19 19 A 0 0 0 0 0 0 6 12 0 0 0 0 12 41 6 0 0 12 0 12 17 0 0 1.706 56 0.23
20 20 A 5 0 0 0 0 0 0 0 9 0 5 5 0 55 0 5 0 5 0 14 22 0 0 1.523 50 0.32
21 21 A 22 4 17 0 0 0 0 0 0 4 0 0 0 48 0 0 0 4 0 0 23 0 0 1.398 46 0.23
22 22 A 3 0 0 0 0 6 0 10 6 0 0 0 0 29 3 26 10 3 0 3 31 0 0 1.957 65 0.19
23 23 A 0 0 0 0 0 0 0 15 0 9 0 15 0 35 6 12 0 3 0 6 34 0 0 1.834 61 0.22
24 24 A 0 3 0 0 0 0 3 3 0 0 0 0 0 76 0 8 0 5 3 0 37 0 0 0.963 32 0.60
25 25 A 0 0 0 0 0 0 0 3 0 0 3 0 0 78 3 8 0 0 0 5 37 0 0 0.845 28 0.62
26 26 A 3 0 0 0 0 0 0 51 3 3 3 0 0 11 0 0 0 11 0 16 37 0 0 1.509 50 0.47
27 27 A 0 0 0 0 0 0 0 0 3 3 0 3 3 78 0 0 0 11 0 0 37 0 0 0.822 27 0.65
28 28 A 0 0 0 0 0 0 0 3 3 0 0 0 0 78 0 5 0 3 3 5 37 0 0 0.897 29 0.65
29 29 A 0 3 0 0 0 0 0 22 3 0 0 3 0 38 0 0 0 5 0 27 37 0 0 1.503 50 0.36
30 30 A 0 3 0 0 0 0 0 14 3 0 0 0 0 65 0 11 0 0 0 5 37 0 0 1.145 38 0.41
31 31 A 0 0 0 0 0 3 0 0 0 0 0 0 0 92 0 0 0 0 3 3 37 0 0 0.370 12 0.85
32 32 A 0 0 0 0 0 0 0 24 5 0 0 14 0 27 0 11 0 5 0 14 37 0 0 1.794 59 0.27
33 33 A 0 0 3 0 0 0 0 3 3 0 0 0 0 81 0 8 0 0 0 3 37 0 0 0.764 25 0.64
34 34 A 0 0 0 0 27 0 0 8 0 3 3 0 0 32 3 5 3 5 3 8 37 0 0 1.930 64 0.10
35 35 A 0 0 3 0 0 0 8 5 0 0 0 0 0 65 0 0 5 11 0 3 37 0 0 1.236 41 0.49
36 36 A 14 3 5 0 0 0 0 19 3 0 0 0 0 38 0 0 5 5 0 8 37 0 0 1.825 60 0.20
37 37 A 0 0 3 0 0 0 0 8 0 3 0 0 0 41 0 3 5 24 0 14 37 0 0 1.635 54 0.39
38 38 A 5 0 0 0 0 0 0 8 0 0 3 0 0 51 3 11 0 0 11 8 37 0 0 1.584 52 0.35
39 39 A 0 5 0 0 0 0 0 0 0 0 0 0 0 89 0 0 0 0 0 5 37 0 0 0.417 13 0.77
40 40 A 0 0 0 0 0 0 3 35 5 0 0 0 0 35 0 0 0 3 3 16 37 22 7 1.480 49 0.33
41 41 A 0 0 0 0 0 0 0 40 0 0 7 0 0 20 0 7 0 7 0 20 15 0 0 1.552 51 0.35
42 42 A 6 0 0 0 0 6 0 0 0 0 6 0 0 41 0 41 0 0 0 0 17 0 0 1.231 41 0.24
43 43 A 35 5 5 0 0 0 0 0 0 5 0 0 0 40 0 0 5 0 0 5 20 0 0 1.483 49 0.22
44 44 A 0 0 0 0 0 0 5 5 32 5 9 0 0 23 0 5 0 14 0 5 22 0 0 1.893 63 0.20
45 45 A 4 19 15 0 4 0 4 0 7 0 0 0 0 44 0 0 0 0 0 4 27 0 0 1.637 54 0.21
46 46 A 0 0 0 0 0 0 0 0 0 3 0 0 0 40 17 27 3 7 3 0 30 0 0 1.538 51 0.40
47 47 A 0 0 0 0 0 0 0 26 0 12 9 15 0 29 0 0 0 3 3 3 34 3 15 1.771 59 0.24
48 48 A 0 0 0 0 0 0 0 0 3 0 0 0 0 90 0 0 6 0 0 0 31 0 0 0.380 12 0.85
49 49 A 0 3 0 0 0 3 0 13 9 0 3 0 9 44 3 0 0 6 0 6 32 0 0 1.845 61 0.21
50 50 A 6 0 0 0 0 0 0 42 3 3 0 0 0 36 0 3 0 3 3 0 33 0 0 1.431 47 0.29
51 51 A 0 6 0 0 0 0 0 6 3 3 0 3 0 24 0 48 0 3 0 3 33 0 0 1.564 52 0.30
52 52 A 0 3 0 0 0 6 30 0 0 3 0 0 0 55 0 0 0 0 0 3 33 0 0 1.180 39 0.43
53 53 A 12 9 0 0 0 0 0 32 0 0 0 0 0 29 0 0 6 3 0 9 34 0 0 1.676 55 0.19
54 54 A 0 0 6 0 0 0 0 6 6 0 20 0 0 43 0 0 0 6 0 14 35 0 0 1.617 53 0.26
55 55 A 0 6 17 0 0 3 0 3 9 3 0 0 0 40 0 11 0 6 0 3 35 0 0 1.861 62 0.14
56 56 A 0 0 0 0 0 0 0 22 3 6 0 0 0 36 0 0 8 8 8 8 36 0 0 1.790 59 0.34
57 57 A 0 0 0 0 0 0 0 22 0 0 0 6 0 28 0 0 3 3 0 39 36 1 0 1.417 47 0.43
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 74 0 6 3 6 9 3 35 0 0 0.962 32 0.66
59 59 A 3 0 0 0 0 6 0 8 0 0 0 8 0 44 0 19 0 0 6 6 36 0 0 1.674 55 0.23
60 60 A 0 0 0 0 0 0 3 17 3 0 0 6 0 53 0 0 11 0 3 6 36 0 0 1.500 50 0.36
61 61 A 19 3 0 0 0 0 0 11 0 0 0 0 3 56 0 3 0 0 0 6 36 0 0 1.348 45 0.26
62 62 A 3 0 0 0 0 0 19 11 0 0 3 0 3 56 0 0 0 0 0 6 36 0 0 1.348 45 0.32
63 63 A 0 14 3 0 0 0 0 42 6 6 3 0 0 19 0 0 0 6 0 3 36 0 0 1.738 58 0.19
64 64 A 0 0 0 0 0 6 0 0 3 3 19 3 0 42 0 3 0 14 3 6 36 0 0 1.776 59 0.25
65 65 A 0 0 0 0 3 0 0 11 0 0 0 0 0 72 3 6 0 0 0 6 36 0 0 0.999 33 0.53
66 66 A 0 0 0 0 0 0 0 11 0 0 0 3 0 68 5 0 0 5 0 8 37 0 0 1.122 37 0.53
67 67 A 0 11 3 0 5 3 0 5 0 0 0 5 0 38 0 11 0 11 0 8 37 0 0 1.961 65 0.16
68 68 A 0 0 0 0 0 0 0 3 0 3 0 0 0 76 0 8 5 0 0 5 37 0 0 0.925 30 0.63
69 69 A 0 0 0 0 0 0 0 70 0 3 3 0 0 14 0 3 0 3 0 5 37 4 11 1.066 35 0.54
70 70 A 0 0 0 0 0 0 0 6 0 0 0 3 3 55 0 0 3 15 0 15 33 0 0 1.390 46 0.46
71 71 A 0 0 0 0 0 3 0 3 6 0 0 0 0 83 0 0 3 0 3 0 35 0 0 0.726 24 0.67
72 72 A 3 0 0 0 0 0 0 22 6 3 28 3 0 17 0 6 3 3 3 6 36 0 0 2.068 69 0.26
73 73 A 0 22 0 0 0 3 0 11 3 6 0 3 0 39 0 3 0 6 0 6 36 0 0 1.826 60 0.15
74 74 A 0 0 0 0 22 0 5 11 5 0 3 0 0 43 3 0 0 0 0 8 37 0 0 1.648 55 0.18
75 75 A 0 0 0 0 0 0 0 11 0 0 0 0 0 78 0 3 3 0 0 5 37 1 0 0.784 26 0.64
76 76 A 3 17 3 3 0 0 0 19 0 0 0 0 0 47 0 3 0 6 0 0 36 0 0 1.530 51 0.18
77 77 A 0 0 0 0 0 0 0 16 5 3 0 0 0 49 3 0 0 19 0 5 37 0 0 1.471 49 0.38
78 78 A 0 0 0 0 0 8 0 8 0 0 0 0 0 70 0 8 3 0 0 3 37 0 0 1.054 35 0.49
79 79 A 0 5 0 0 0 0 0 0 3 0 0 0 0 81 3 0 0 0 3 5 37 0 0 0.778 25 0.67
80 80 A 0 0 0 0 0 0 0 41 3 0 0 0 0 27 3 0 11 5 0 11 37 0 0 1.554 51 0.36
81 81 A 0 0 0 0 0 0 0 49 5 8 0 0 3 22 0 8 0 0 3 3 37 19 7 1.540 51 0.33
82 82 A 0 0 0 0 0 0 0 17 0 0 0 0 0 28 6 44 0 0 0 6 18 0 0 1.336 44 0.27
83 83 A 37 0 5 0 0 0 0 11 5 5 0 0 0 26 0 0 11 0 0 0 19 0 0 1.658 55 0.16
84 84 A 5 0 0 0 5 9 0 23 5 0 18 0 0 23 0 5 0 0 0 9 22 0 0 1.981 66 0.09
85 85 A 0 4 21 0 17 0 0 4 0 0 8 0 0 29 0 4 0 0 0 13 24 0 0 1.849 61 0.08
86 86 A 4 0 0 0 0 4 0 0 0 0 0 0 0 50 11 29 0 4 0 0 28 0 0 1.301 43 0.38
87 87 A 3 0 0 0 0 0 0 67 0 0 3 3 0 9 0 0 3 9 0 3 33 0 0 1.236 41 0.53
88 88 A 0 0 0 0 0 0 0 0 0 0 0 0 0 94 0 3 0 3 0 0 36 0 0 0.253 8 0.89
89 89 A 0 0 0 0 0 0 3 3 0 0 0 0 0 84 0 5 0 0 3 3 37 0 0 0.696 23 0.72
90 90 A 0 0 0 0 0 0 0 19 0 0 0 0 0 57 0 0 5 3 0 16 37 0 0 1.187 39 0.46
91 91 A 0 3 0 0 0 5 3 0 0 0 0 0 0 68 0 8 5 0 3 5 37 26 5 1.235 41 0.52
92 92 A 0 0 0 0 0 0 73 0 9 0 0 0 0 18 0 0 0 0 0 0 11 0 0 0.760 25 0.49
93 93 A 0 14 36 0 0 0 0 0 0 0 0 0 0 29 0 0 0 0 14 7 14 0 0 1.470 49 0.11
94 94 A 0 0 0 0 0 0 0 15 5 0 20 0 5 15 0 0 10 5 0 25 20 0 0 1.917 63 0.26
95 95 A 29 0 0 0 0 0 0 13 17 4 0 0 0 21 0 0 4 4 0 8 24 0 0 1.849 61 0.20
96 96 A 0 0 0 0 0 0 0 15 9 0 0 0 0 35 0 3 0 9 3 26 34 0 0 1.637 54 0.37
97 97 A 0 0 0 0 0 0 3 3 3 3 0 0 0 74 0 9 3 0 0 3 35 0 0 1.041 34 0.58
98 98 A 0 0 0 0 0 0 3 3 0 0 3 0 0 89 0 0 0 0 0 3 37 0 0 0.492 16 0.76
99 99 A 0 0 0 0 0 0 0 81 0 0 0 0 0 11 0 0 0 3 0 5 37 0 0 0.666 22 0.70
100 100 A 0 0 0 0 0 0 3 0 0 0 3 0 0 92 0 3 0 0 0 0 37 21 4 0.370 12 0.83
101 101 A 44 0 6 0 0 0 0 0 0 0 0 0 0 25 0 19 6 0 0 0 16 0 0 1.369 45 0.15
102 102 A 0 0 4 0 0 0 4 9 0 0 13 0 0 52 4 4 0 4 0 4 23 0 0 1.635 54 0.26
103 103 A 0 0 0 0 0 0 0 11 7 0 7 15 0 22 0 7 0 19 0 11 27 0 0 1.996 66 0.24
104 104 A 0 0 0 0 0 0 0 28 6 0 3 6 0 22 0 13 9 6 0 6 32 0 0 1.973 65 0.26
105 105 A 0 0 0 0 0 3 3 11 0 6 0 0 0 53 3 0 0 14 0 8 36 0 0 1.522 50 0.37
106 106 A 0 3 0 0 0 0 0 3 0 0 3 0 0 81 0 0 3 6 3 0 36 0 0 0.832 27 0.68
107 107 A 0 0 0 0 0 0 0 0 0 0 0 0 0 92 6 0 0 0 0 3 36 0 0 0.340 11 0.87
108 108 A 0 0 0 0 0 0 0 31 0 0 0 3 0 23 3 0 6 6 0 29 35 0 0 1.589 53 0.40
109 109 A 0 0 0 0 0 0 0 0 0 0 0 0 0 86 3 3 0 6 0 3 35 0 0 0.600 20 0.78
110 110 A 0 0 0 0 0 0 0 3 3 0 0 0 0 52 0 0 9 0 3 30 33 0 0 1.239 41 0.51
111 111 A 0 0 0 0 0 0 0 43 19 0 0 14 0 0 0 0 0 19 0 5 21 0 0 1.418 47 0.48
112 112 A 0 22 0 0 0 0 0 0 0 0 0 56 0 11 0 0 0 0 0 11 9 0 0 1.149 38 0.19
113 113 A 0 0 0 0 88 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 8 0 0 0.377 12 0.64
114 114 A 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 71 0 14 7 0 0 0.796 26 0.52
115 115 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 0 86 0 0 7 0 0 0.410 13 0.68
116 116 A 0 0 50 0 17 0 0 0 0 0 0 0 0 17 0 0 0 17 0 0 6 0 0 1.242 41 0.07
117 117 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 0.000 0 1.00
118 118 A 20 40 40 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 1.055 35 0.64
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
3 41 41 1 gHh
5 25 131 1 dHd
5 58 165 1 hDk
6 37 656 1 hGh
6 59 679 1 gAh
6 75 696 1 hGa
7 59 457 1 gHe
9 13 20 1 pAh
9 35 43 1 gGg
9 76 85 1 nKk
10 42 109 1 hGh
10 75 143 1 hQh
12 18 543 1 hHg
12 79 605 1 gHh
12 89 616 1 hAh
13 10 83 1 gCc
14 41 435 1 hGh
15 39 56 1 sHh
16 67 280 1 hHh
17 37 169 1 hHg
18 35 54 1 yDd
18 42 62 1 nAh
18 85 106 1 nKy
18 94 116 1 hKv
19 41 175 1 gGh
19 63 198 2 gGHh
19 75 212 1 kDg
19 90 228 1 hDk
20 41 175 1 gGh
20 63 198 2 gGHh
20 75 212 1 kDg
20 90 228 1 hDk
21 37 169 1 hHg
22 42 221 1 hGh
22 64 244 2 gWNd
23 41 175 1 gGh
23 63 198 2 gGHh
23 75 212 1 kDg
23 90 228 1 hDk
26 37 101 1 pHh
28 37 161 1 hHh
28 59 184 2 gCHh
28 77 204 1 hGy
29 18 145 1 gHr
29 86 214 1 hDh
30 37 677 1 gEh
31 38 80 1 gPh
31 60 103 2 gGPh
32 33 127 2 gDHg
33 32 32 1 hHh
34 42 103 1 gHh
36 42 218 1 hGh
36 64 241 2 gWNd
//