Complet list of 1h9f hssp file
Complete list of 1h9f.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1H9F
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER MEMBRANE PROTEIN 09-MAR-01 1H9F
COMPND MOL_ID: 1; MOLECULE: THYMOPOIETIN; CHAIN: A; FRAGMENT: LEM DOMAIN (103
SOURCE MOL_ID: 1; SYNTHETIC: YES; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM
AUTHOR C.LAGURI,B.GILQUIN,N.WOLFF,R.ROMI-LEBRUN,K.COURCHAY, I.CALLEBAUT,H.J.W
DBREF 1H9F A 1 57 UNP AAC25390 AAC25390 103 159
SEQLENGTH 57
NCHAIN 1 chain(s) in 1H9F data set
NALIGN 127
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A2T926_HUMAN 1.00 1.00 1 57 103 159 57 0 0 248 A2T926 Thymopentin OS=Homo sapiens GN=TMPO PE=2 SV=1
2 : G3QLH5_GORGO 1.00 1.00 1 57 103 159 57 0 0 694 G3QLH5 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101133363 PE=4 SV=1
3 : G3S0I0_GORGO 1.00 1.00 1 57 95 151 57 0 0 446 G3S0I0 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101133363 PE=4 SV=1
4 : G5E972_HUMAN 1.00 1.00 1 57 103 159 57 0 0 414 G5E972 Thymopentin OS=Homo sapiens GN=TMPO PE=4 SV=1
5 : H0YJH7_HUMAN 1.00 1.00 1 57 10 66 57 0 0 237 H0YJH7 Thymopentin (Fragment) OS=Homo sapiens GN=TMPO PE=2 SV=1
6 : H2Q6N8_PANTR 1.00 1.00 1 57 103 159 57 0 0 454 H2Q6N8 Thymopoietin OS=Pan troglodytes GN=TMPO PE=2 SV=1
7 : K6ZJD5_PANTR 1.00 1.00 1 57 103 159 57 0 0 345 K6ZJD5 Thymopoietin OS=Pan troglodytes GN=TMPO PE=2 SV=1
8 : K7C541_PANTR 1.00 1.00 1 57 103 159 57 0 0 694 K7C541 Thymopoietin OS=Pan troglodytes GN=TMPO PE=2 SV=1
9 : K7CXW8_PANTR 1.00 1.00 1 57 103 159 57 0 0 454 K7CXW8 Thymopoietin OS=Pan troglodytes GN=TMPO PE=2 SV=1
10 : LAP2A_HUMAN 1.00 1.00 1 57 103 159 57 0 0 694 P42166 Lamina-associated polypeptide 2, isoform alpha OS=Homo sapiens GN=TMPO PE=1 SV=2
11 : LAP2B_HUMAN 1.00 1.00 1 57 103 159 57 0 0 454 P42167 Lamina-associated polypeptide 2, isoforms beta/gamma OS=Homo sapiens GN=TMPO PE=1 SV=2
12 : Q59G12_HUMAN 1.00 1.00 1 57 136 192 57 0 0 378 Q59G12 Lamina-associated polypeptide 2, isoforms beta/gamma variant (Fragment) OS=Homo sapiens PE=2 SV=1
13 : D2HE43_AILME 0.98 0.98 1 57 105 161 57 0 0 694 D2HE43 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_009037 PE=4 SV=1
14 : E2R4J2_CANFA 0.98 0.98 1 57 103 159 57 0 0 454 E2R4J2 Uncharacterized protein OS=Canis familiaris GN=TMPO PE=4 SV=1
15 : F6WJ12_CALJA 0.98 1.00 1 57 103 159 57 0 0 454 F6WJ12 Thymopoietin isoform beta OS=Callithrix jacchus GN=TMPO PE=2 SV=1
16 : F6YNQ0_CALJA 0.98 1.00 1 57 103 159 57 0 0 345 F6YNQ0 Thymopoietin isoform gamma OS=Callithrix jacchus GN=TMPO PE=2 SV=1
17 : F6YNR4_CALJA 0.98 1.00 1 57 103 159 57 0 0 454 F6YNR4 Uncharacterized protein OS=Callithrix jacchus GN=TMPO PE=4 SV=1
18 : F6YNY7_CALJA 0.98 1.00 1 57 103 159 57 0 0 691 F6YNY7 Thymopoietin isoform alpha OS=Callithrix jacchus GN=TMPO PE=2 SV=1
19 : F7HAU0_MACMU 0.98 1.00 1 57 103 159 57 0 0 695 F7HAU0 Thymopoietin isoform alpha OS=Macaca mulatta GN=LOC100425353 PE=2 SV=1
20 : F7HAU8_MACMU 0.98 1.00 1 57 103 159 57 0 0 345 F7HAU8 Thymopoietin isoform gamma OS=Macaca mulatta GN=LOC100425353 PE=2 SV=1
21 : F7HAV4_MACMU 0.98 1.00 1 57 103 159 57 0 0 454 F7HAV4 Thymopoietin isoform beta OS=Macaca mulatta GN=LOC100425353 PE=2 SV=1
22 : G1LW22_AILME 0.98 0.98 1 57 90 146 57 0 0 529 G1LW22 Uncharacterized protein OS=Ailuropoda melanoleuca GN=TMPO PE=4 SV=1
23 : G1LW26_AILME 0.98 0.98 1 57 103 159 57 0 0 692 G1LW26 Uncharacterized protein OS=Ailuropoda melanoleuca GN=TMPO PE=4 SV=1
24 : G1R1Z5_NOMLE 0.98 1.00 1 57 103 159 57 0 0 310 G1R1Z5 Uncharacterized protein OS=Nomascus leucogenys GN=SLC25A3 PE=4 SV=2
25 : G7N578_MACMU 0.98 1.00 1 57 11 67 57 0 0 603 G7N578 Thymopoietin isoform alpha (Fragment) OS=Macaca mulatta GN=EGK_04086 PE=4 SV=1
26 : G7PJ42_MACFA 0.98 1.00 1 57 11 67 57 0 0 603 G7PJ42 Thymopoietin isoform alpha (Fragment) OS=Macaca fascicularis GN=EGM_03644 PE=4 SV=1
27 : G9KUB8_MUSPF 0.98 0.98 1 57 53 109 57 0 0 507 G9KUB8 Thymopoietin (Fragment) OS=Mustela putorius furo PE=2 SV=1
28 : H0X6F2_OTOGA 0.98 0.98 1 57 103 159 57 0 0 691 H0X6F2 Uncharacterized protein OS=Otolemur garnettii GN=TMPO PE=4 SV=1
29 : H2NIC2_PONAB 0.98 1.00 1 57 103 159 57 0 0 454 H2NIC2 Uncharacterized protein OS=Pongo abelii GN=TMPO PE=4 SV=1
30 : K7EUS9_PONAB 0.98 1.00 1 57 103 159 57 0 0 345 K7EUS9 Uncharacterized protein OS=Pongo abelii GN=TMPO PE=4 SV=1
31 : L5KIK6_PTEAL 0.98 0.98 1 57 103 159 57 0 0 950 L5KIK6 Lamina-associated polypeptide 2, isoform alpha OS=Pteropus alecto GN=PAL_GLEAN10015513 PE=4 SV=1
32 : M3WWZ0_FELCA 0.98 0.98 1 57 10 66 57 0 0 360 M3WWZ0 Uncharacterized protein (Fragment) OS=Felis catus GN=TMPO PE=4 SV=1
33 : M3YIY0_MUSPF 0.98 0.98 1 57 103 159 57 0 0 454 M3YIY0 Uncharacterized protein OS=Mustela putorius furo GN=TMPO PE=4 SV=1
34 : U3DHN1_CALJA 0.98 1.00 1 57 103 159 57 0 0 691 U3DHN1 Thymopoietin isoform alpha OS=Callithrix jacchus GN=TMPO PE=2 SV=1
35 : A5D7N8_BOVIN 0.96 0.98 1 57 103 159 57 0 0 382 A5D7N8 TMPO protein OS=Bos taurus GN=TMPO PE=2 SV=1
36 : F1MSQ9_BOVIN 0.96 0.98 1 57 103 159 57 0 0 382 F1MSQ9 Uncharacterized protein OS=Bos taurus GN=TMPO PE=4 SV=1
37 : F1SQS2_PIG 0.96 0.98 1 57 103 159 57 0 0 190 F1SQS2 Uncharacterized protein OS=Sus scrofa GN=TMPO PE=4 SV=2
38 : I3LHY0_PIG 0.96 0.98 1 57 10 66 57 0 0 427 I3LHY0 Uncharacterized protein (Fragment) OS=Sus scrofa PE=4 SV=1
39 : K9IXW7_DESRO 0.96 0.96 1 57 103 159 57 0 0 453 K9IXW7 Putative conserved plasma membrane protein OS=Desmodus rotundus PE=2 SV=1
40 : L8I1S6_9CETA 0.96 0.98 1 57 103 159 57 0 0 689 L8I1S6 Lamina-associated polypeptide 2, isoform alpha OS=Bos mutus GN=M91_19006 PE=4 SV=1
41 : L9LCW4_TUPCH 0.96 0.98 1 57 177 233 57 0 0 766 L9LCW4 Lamina-associated polypeptide 2, isoform alpha OS=Tupaia chinensis GN=TREES_T100002525 PE=4 SV=1
42 : S7NMM2_MYOBR 0.96 0.98 1 57 18 74 57 0 0 850 S7NMM2 Lamina-associated polypeptide 2, isoform alpha OS=Myotis brandtii GN=D623_10025578 PE=4 SV=1
43 : W5PTN4_SHEEP 0.96 0.98 1 57 15 71 57 0 0 366 W5PTN4 Uncharacterized protein (Fragment) OS=Ovis aries GN=TMPO PE=4 SV=1
44 : F7CPD9_HORSE 0.95 0.98 1 57 100 156 57 0 0 450 F7CPD9 Uncharacterized protein OS=Equus caballus GN=TMPO PE=4 SV=1
45 : G1NSG6_MYOLU 0.95 0.98 1 57 104 160 57 0 0 455 G1NSG6 Uncharacterized protein OS=Myotis lucifugus GN=TMPO PE=4 SV=1
46 : G1T3V5_RABIT 0.95 0.98 1 57 105 161 57 0 0 385 G1T3V5 Uncharacterized protein OS=Oryctolagus cuniculus GN=TMPO PE=4 SV=2
47 : G3TD04_LOXAF 0.95 0.98 1 57 103 159 57 0 0 693 G3TD04 Uncharacterized protein OS=Loxodonta africana GN=TMPO PE=4 SV=1
48 : G3U6R4_LOXAF 0.95 0.98 1 57 103 159 57 0 0 453 G3U6R4 Uncharacterized protein OS=Loxodonta africana GN=TMPO PE=4 SV=1
49 : G5B0Z8_HETGA 0.95 0.98 1 57 100 156 57 0 0 232 G5B0Z8 Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Heterocephalus glaber GN=GW7_17429 PE=4 SV=1
50 : G5B2K7_HETGA 0.95 0.98 1 57 11 67 57 0 0 598 G5B2K7 Lamina-associated polypeptide 2, isoform alpha (Fragment) OS=Heterocephalus glaber GN=GW7_08591 PE=4 SV=1
51 : F7CUJ3_CALJA 0.93 0.96 1 56 119 175 57 1 1 364 F7CUJ3 Uncharacterized protein (Fragment) OS=Callithrix jacchus PE=4 SV=1
52 : G3I2N4_CRIGR 0.93 0.98 1 57 12 68 57 0 0 319 G3I2N4 Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Cricetulus griseus GN=I79_017678 PE=4 SV=1
53 : I3MD17_SPETR 0.93 0.96 1 57 103 159 57 0 0 691 I3MD17 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=TMPO PE=4 SV=1
54 : LAP2A_MOUSE 0.93 0.98 1 57 102 158 57 0 0 693 Q61033 Lamina-associated polypeptide 2, isoforms alpha/zeta OS=Mus musculus GN=Tmpo PE=1 SV=4
55 : LAP2B_MOUSE 0.93 0.98 1 57 102 158 57 0 0 452 Q61029 Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma OS=Mus musculus GN=Tmpo PE=1 SV=4
56 : Q3TNH0_MOUSE 0.93 0.98 1 57 102 158 57 0 0 412 Q3TNH0 Putative uncharacterized protein OS=Mus musculus GN=Tmpo PE=2 SV=1
57 : Q3U7B3_MOUSE 0.93 0.98 1 57 102 158 57 0 0 452 Q3U7B3 Putative uncharacterized protein OS=Mus musculus GN=Tmpo PE=2 SV=1
58 : Q3U955_MOUSE 0.93 0.98 1 57 102 158 57 0 0 452 Q3U955 Putative uncharacterized protein OS=Mus musculus GN=Tmpo PE=2 SV=1
59 : Q3UR33_MOUSE 0.93 0.98 1 57 102 158 57 0 0 452 Q3UR33 Putative uncharacterized protein OS=Mus musculus GN=Tmpo PE=2 SV=1
60 : Q78WP6_MOUSE 0.93 0.98 1 57 35 91 57 0 0 277 Q78WP6 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Tmpo PE=2 SV=1
61 : LAP2_RAT 0.89 0.98 1 57 102 158 57 0 0 452 Q62733 Lamina-associated polypeptide 2, isoform beta OS=Rattus norvegicus GN=Tmpo PE=1 SV=3
62 : R9PXU0_RAT 0.89 0.98 1 57 10 66 57 0 0 360 R9PXU0 Lamina-associated polypeptide 2, isoform beta (Fragment) OS=Rattus norvegicus GN=Tmpo PE=4 SV=1
63 : F7C1P7_ORNAN 0.88 0.95 1 57 44 100 57 0 0 456 F7C1P7 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=TMPO PE=4 SV=2
64 : F7HMN9_MACMU 0.87 0.93 3 57 45 99 55 0 0 286 F7HMN9 Uncharacterized protein (Fragment) OS=Macaca mulatta PE=4 SV=1
65 : G3WA96_SARHA 0.86 0.93 1 57 18 74 57 0 0 368 G3WA96 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=TMPO PE=4 SV=1
66 : F6X3L4_MONDO 0.79 0.93 1 57 106 162 57 0 0 456 F6X3L4 Uncharacterized protein OS=Monodelphis domestica GN=TMPO PE=4 SV=1
67 : K7G0Q9_PELSI 0.79 0.89 1 53 30 82 53 0 0 387 K7G0Q9 Uncharacterized protein OS=Pelodiscus sinensis GN=TMPO PE=4 SV=1
68 : F1NZS9_CHICK 0.75 0.91 1 57 90 146 57 0 0 446 F1NZS9 Uncharacterized protein OS=Gallus gallus GN=TMPO PE=4 SV=1
69 : G1NGA1_MELGA 0.75 0.89 1 57 12 68 57 0 0 368 G1NGA1 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=TMPO PE=4 SV=2
70 : G5E7W4_MELGA 0.75 0.89 1 57 12 68 57 0 0 179 G5E7W4 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=TMPO PE=4 SV=1
71 : Q5ZKG7_CHICK 0.75 0.91 1 57 90 146 57 0 0 193 Q5ZKG7 Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_10o24 PE=2 SV=1
72 : Q5ZMN6_CHICK 0.75 0.91 1 57 90 146 57 0 0 446 Q5ZMN6 Putative uncharacterized protein OS=Gallus gallus GN=RCJMB04_1i19 PE=2 SV=1
73 : R0L8C8_ANAPL 0.75 0.91 1 57 11 67 57 0 0 374 R0L8C8 Lamina-associated polypeptide 2, isoforms beta/gamma (Fragment) OS=Anas platyrhynchos GN=Anapl_05087 PE=4 SV=1
74 : U3IRD0_ANAPL 0.75 0.91 1 57 11 67 57 0 0 366 U3IRD0 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=TMPO PE=4 SV=1
75 : M7ANU3_CHEMY 0.74 0.89 1 53 91 143 53 0 0 445 M7ANU3 Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma (Fragment) OS=Chelonia mydas GN=UY3_15983 PE=4 SV=1
76 : Q5ZM54_CHICK 0.74 0.91 1 57 90 146 57 0 0 248 Q5ZM54 Putative uncharacterized protein (Fragment) OS=Gallus gallus GN=RCJMB04_3b18 PE=2 SV=1
77 : W5KJR9_ASTMX 0.74 0.91 7 52 91 136 46 0 0 661 W5KJR9 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
78 : W5KJS0_ASTMX 0.74 0.91 7 52 91 136 46 0 0 373 W5KJS0 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
79 : H0ZEI1_TAEGU 0.70 0.89 1 57 10 66 57 0 0 364 H0ZEI1 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=TMPO PE=4 SV=1
80 : U3K8V0_FICAL 0.70 0.91 1 57 98 154 57 0 0 452 U3K8V0 Uncharacterized protein OS=Ficedula albicollis GN=TMPO PE=4 SV=1
81 : W5NEF6_LEPOC 0.70 0.89 7 52 27 72 46 0 0 370 W5NEF6 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
82 : J3S900_CROAD 0.69 0.88 5 56 99 150 52 0 0 446 J3S900 Lamina-associated polypeptide 2, isoforms beta/delta/epsilon/gamma-like OS=Crotalus adamanteus PE=2 SV=1
83 : V8NN61_OPHHA 0.69 0.90 5 56 99 150 52 0 0 404 V8NN61 Lamina-associated polypeptide 2, isoforms alpha/zeta (Fragment) OS=Ophiophagus hannah GN=Tmpo PE=4 SV=1
84 : G1KNK2_ANOCA 0.68 0.88 1 56 97 152 56 0 0 456 G1KNK2 Uncharacterized protein OS=Anolis carolinensis GN=TMPO PE=4 SV=2
85 : B5X3U8_SALSA 0.67 0.91 7 52 90 135 46 0 0 356 B5X3U8 Lamina-associated polypeptide 2 isoform beta OS=Salmo salar GN=LAP2 PE=2 SV=1
86 : H2LFD8_ORYLA 0.66 0.89 7 53 91 137 47 0 0 366 H2LFD8 Uncharacterized protein OS=Oryzias latipes GN=LOC101162206 PE=4 SV=1
87 : O73766_XENLA 0.65 0.88 1 57 85 141 57 0 0 557 O73766 Lamina associated protein 2-beta isoform OS=Xenopus laevis GN=lap2omega PE=2 SV=1
88 : Q4LDN2_XENLA 0.65 0.88 1 57 85 141 57 0 0 520 Q4LDN2 Lamina associated protein 2-beta isoform OS=Xenopus laevis PE=2 SV=1
89 : Q5RGX2_DANRE 0.65 0.89 7 52 92 137 46 0 0 369 Q5RGX2 Uncharacterized protein OS=Danio rerio GN=tmpoa PE=4 SV=1
90 : Q5RGX4_DANRE 0.65 0.89 7 52 92 137 46 0 0 685 Q5RGX4 Uncharacterized protein OS=Danio rerio GN=tmpoa PE=4 SV=1
91 : Q5RGX5_DANRE 0.65 0.89 7 52 92 137 46 0 0 515 Q5RGX5 Uncharacterized protein OS=Danio rerio GN=tmpoa PE=4 SV=1
92 : Q7ZTV0_DANRE 0.65 0.89 7 52 92 137 46 0 0 657 Q7ZTV0 Thymopoietin OS=Danio rerio GN=tmpoa PE=2 SV=1
93 : Q7ZWN7_XENLA 0.65 0.88 1 57 85 141 57 0 0 206 Q7ZWN7 MGC53918 protein OS=Xenopus laevis PE=2 SV=1
94 : Q8UUR4_DANRE 0.65 0.89 7 52 92 137 46 0 0 369 Q8UUR4 Lamina-associted protein 2 gamma OS=Danio rerio GN=tmpoa PE=2 SV=1
95 : Q8UUR5_DANRE 0.65 0.89 7 52 92 137 46 0 0 515 Q8UUR5 Lamina-associted protein 2 beta OS=Danio rerio GN=tmpoa PE=2 SV=1
96 : Q8UUR6_DANRE 0.65 0.89 7 52 92 137 46 0 0 657 Q8UUR6 Lamina-associted protein 2 omega OS=Danio rerio GN=tmpoa PE=2 SV=1
97 : Q8UUR7_DANRE 0.65 0.89 7 52 92 137 46 0 0 657 Q8UUR7 Lamina-associted protein 2 OS=Danio rerio GN=tmpoa PE=2 SV=1
98 : V9KMW6_CALMI 0.62 0.85 1 52 89 140 52 0 0 354 V9KMW6 Lamina-associated polypeptide 2 isoform gamma OS=Callorhynchus milii PE=2 SV=1
99 : V9KPL8_CALMI 0.62 0.85 1 52 53 104 52 0 0 318 V9KPL8 Lamina-associated polypeptide 2 isoform gamma (Fragment) OS=Callorhynchus milii PE=2 SV=1
100 : F1MCA8_BOVIN 0.60 0.78 1 57 103 162 60 2 3 457 F1MCA8 Uncharacterized protein OS=Bos taurus GN=TMPO PE=4 SV=1
101 : G3NK35_GASAC 0.59 0.82 9 57 93 141 49 0 0 326 G3NK35 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
102 : Q32N69_XENLA 0.59 0.86 1 56 85 140 56 0 0 337 Q32N69 LAP2 protein OS=Xenopus laevis GN=LAP2 PE=2 SV=1
103 : Q9YGK9_XENLA 0.59 0.86 1 56 85 140 56 0 0 518 Q9YGK9 Lamina associated polypeptide 2 OS=Xenopus laevis GN=tmpo PE=2 SV=1
104 : W5LEC2_ASTMX 0.57 0.79 5 57 88 140 53 0 0 362 W5LEC2 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
105 : Q6P846_XENTR 0.56 0.84 1 57 85 141 57 0 0 452 Q6P846 Thymopoietin OS=Xenopus tropicalis GN=tmpo PE=2 SV=1
106 : H3C180_TETNG 0.54 0.77 1 52 86 137 52 0 0 357 H3C180 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
107 : H3DEZ8_TETNG 0.54 0.77 1 52 93 144 52 0 0 351 H3DEZ8 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
108 : Q4RSF1_TETNG 0.54 0.77 1 52 86 137 52 0 0 335 Q4RSF1 Chromosome 13 SCAF15000, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00029726001 PE=4 SV=1
109 : H2TSA9_TAKRU 0.53 0.82 8 52 91 135 45 0 0 464 H2TSA9 Uncharacterized protein OS=Takifugu rubripes GN=LOC101064932 PE=4 SV=1
110 : H2TSB0_TAKRU 0.53 0.82 8 52 91 135 45 0 0 360 H2TSB0 Uncharacterized protein OS=Takifugu rubripes GN=LOC101064932 PE=4 SV=1
111 : H2TSB1_TAKRU 0.53 0.82 8 52 107 151 45 0 0 446 H2TSB1 Uncharacterized protein OS=Takifugu rubripes GN=LOC101064932 PE=4 SV=1
112 : H2TSB2_TAKRU 0.53 0.82 8 52 112 156 45 0 0 429 H2TSB2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101064932 PE=4 SV=1
113 : H2V1Z7_TAKRU 0.53 0.79 1 57 88 144 57 0 0 357 H2V1Z7 Uncharacterized protein OS=Takifugu rubripes GN=LOC101068917 PE=4 SV=1
114 : H3AFX7_LATCH 0.53 0.79 1 57 92 148 57 0 0 314 H3AFX7 Uncharacterized protein OS=Latimeria chalumnae PE=4 SV=2
115 : I3JPT4_ORENI 0.53 0.76 7 57 91 141 51 0 0 365 I3JPT4 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100707274 PE=4 SV=1
116 : J9BET2_WUCBA 0.53 0.83 8 54 2 48 47 0 0 58 J9BET2 Uncharacterized protein OS=Wuchereria bancrofti GN=WUBG_03351 PE=4 SV=1
117 : V9L988_CALMI 0.53 0.76 8 56 1 49 49 0 0 237 V9L988 Lamina-associated polypeptide 2 isoform beta OS=Callorhynchus milii PE=2 SV=1
118 : C0H9M0_SALSA 0.52 0.79 6 57 90 141 52 0 0 386 C0H9M0 Lamina-associated polypeptide 2, isoforms beta/gamma OS=Salmo salar GN=LAP2B PE=2 SV=1
119 : M4ARB4_XIPMA 0.52 0.81 6 57 90 141 52 0 0 361 M4ARB4 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
120 : W5N1S3_LEPOC 0.50 0.81 4 51 92 139 48 0 0 411 W5N1S3 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
121 : A8PKB7_BRUMA 0.49 0.81 8 54 2 48 47 0 0 350 A8PKB7 LEM domain containing protein OS=Brugia malayi GN=Bm1_28960 PE=4 SV=1
122 : W5LGR4_ASTMX 0.47 0.78 1 55 102 156 55 0 0 358 W5LGR4 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
123 : G3WNU6_SARHA 0.44 0.68 8 57 13 62 50 0 0 214 G3WNU6 Uncharacterized protein OS=Sarcophilus harrisii GN=LEMD1 PE=4 SV=1
124 : E1FPW5_LOALO 0.43 0.79 8 54 2 48 47 0 0 350 E1FPW5 LEM domain-containing protein OS=Loa loa GN=LOAG_02942 PE=4 SV=1
125 : H2Y9P2_CIOSA 0.43 0.70 4 50 48 94 47 0 0 298 H2Y9P2 Uncharacterized protein OS=Ciona savignyi GN=Csa.2635 PE=4 SV=1
126 : H2Y9P3_CIOSA 0.43 0.70 4 50 48 94 47 0 0 212 H2Y9P3 Uncharacterized protein OS=Ciona savignyi GN=Csa.2635 PE=4 SV=1
127 : H2Y9P4_CIOSA 0.43 0.70 4 50 48 94 47 0 0 187 H2Y9P4 Uncharacterized protein OS=Ciona savignyi GN=Csa.2635 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A R 0 0 263 94 20 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR RRRRRR
2 2 A Q - 0 0 136 94 85 QQQQQQQQQQQQLPQQQQQQQLLQQQLLQQLLLQPPLLLPILPLLLLLIIQPLLLLLLLLPPP SSLAAA
3 3 A E - 0 0 112 95 29 EEEEEEEEEEEEEEDDDDDDDEEDDDEEDDEEEDEEEEEEEEEEEDEEEEDEEEEEEEEEEEEQEEEEEE
4 4 A D - 0 0 100 99 39 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEDEEEEEE
5 5 A K S > S+ 0 0 59 102 41 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
6 6 A D T 3> S+ 0 0 51 104 13 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
7 7 A D T 34 + 0 0 105 118 32 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDD
8 8 A L T <4 S- 0 0 69 127 46 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVLLLLLLLLLLLLLLLLLILLLL
9 9 A D T > - 0 0 79 128 19 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
10 10 A V T < S+ 0 0 7 128 10 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
11 11 A T T 4 S+ 0 0 46 128 35 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTT
12 12 A E T 4 S+ 0 0 128 128 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEDEEEE
13 13 A L S < S- 0 0 18 128 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
14 14 A T - 0 0 68 128 45 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSSTTTSSTSTTTTTSSTSSSSSSSSSSSTISTSSSS
15 15 A N S > S+ 0 0 49 128 24 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
16 16 A E T 4 S+ 0 0 148 128 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
17 17 A D T >4 S+ 0 0 96 128 41 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDDDDEDDDDDDDDEEEEEQEEEEDDEEDDDD
18 18 A L T >> S+ 0 0 0 128 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
19 19 A L H 3X S+ 0 0 63 128 88 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLLLLLLLLLLLLLLLLLLLLLLLLLLLQQQQ
20 20 A D H <> S+ 0 0 115 128 38 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGEDDDDDEDDDDDDDDEEEDCSEEEE
21 21 A Q H <4 S+ 0 0 20 128 32 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQQQQQQ
22 22 A L H X>S+ 0 0 0 128 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
23 23 A V H <5S+ 0 0 91 128 54 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMTT
24 24 A K T <5S+ 0 0 123 128 33 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKRRRRKRKRRRRRRRRRKKKKKKKK
25 25 A Y T 45S- 0 0 72 128 24 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYHYYY
26 26 A G T <5S+ 0 0 70 128 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGGGGGGGGGGGGGGGG
27 27 A V < - 0 0 19 128 38 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVgVVVVVVVVVVVVVVVVIII
28 28 A N + 0 0 137 128 38 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNnNNNNNNNNNNNNNNNTNNN
29 29 A P - 0 0 17 128 34 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
30 30 A G + 0 0 45 128 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A P + 0 0 90 128 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
32 32 A I + 0 0 16 128 6 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
33 33 A V >> - 0 0 82 128 20 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
34 34 A G T 34 S+ 0 0 50 128 43 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEAAAA
35 35 A T T 34 S+ 0 0 117 128 54 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
36 36 A T T X> S+ 0 0 22 128 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
37 37 A R H 3X S+ 0 0 43 128 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A K H >4 S+ 0 0 121 128 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
39 39 A L H X> S+ 0 0 98 128 19 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
40 40 A Y H 3X S+ 0 0 46 128 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYCYYYYYY
41 41 A E H << S+ 0 0 53 128 16 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
42 42 A K H <> S+ 0 0 69 128 22 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
43 43 A K H < S+ 0 0 115 128 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNKKKKKK
44 44 A L T >< S+ 0 0 0 128 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
45 45 A L G >> S+ 0 0 8 128 71 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLQLLL
46 46 A K G 3< S+ 0 0 135 128 9 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
47 47 A L G <4 S+ 0 0 92 128 8 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLALLLLLL
48 48 A R T <4 S+ 0 0 14 128 79 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKMMM
49 49 A E S < S- 0 0 74 128 30 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEE
50 50 A Q - 0 0 133 128 31 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHHQQQQ
51 51 A G - 0 0 47 125 37 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRVSGGGG
52 52 A T + 0 0 122 124 74 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTPTTTTTTTAAPTLLPPPP
53 53 A E S S- 0 0 142 103 44 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEDEEEEEEEEEEEEEEEEEGEEEEEEE
54 54 A S S S+ 0 0 127 100 66 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS LLL
55 55 A R - 0 0 202 97 62 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR KKK
56 56 A S 0 0 108 96 53 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS TTT
57 57 A S 0 0 179 89 46 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSSSSSS PPP
## ALIGNMENTS 71 - 127
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A R 0 0 263 94 20 RRRRRR RR R RR R KKR KK QKKK RR Q
2 2 A Q - 0 0 136 94 85 AAAALA PP T AA A TTP AA APPP AG E
3 3 A E - 0 0 112 95 29 EEEEEE EE E EE E KKE EE ERRR EG E
4 4 A D - 0 0 100 99 39 EEEEEE EE E EE E VVD EE EVVV EE N E DDD
5 5 A K S > S+ 0 0 59 102 41 KKKKKK KK QQQ KK K DDK KKKKEEE ER T A TTT
6 6 A D T 3> S+ 0 0 51 104 13 DDDDDD DD DDD DD D DDD DDEDEEE EE EEE D EEE
7 7 A D T 34 + 0 0 105 118 32 DDDDDDEEGDDDDDDDDDDDDDDDDDDYYD DDEDEEE EDE EEV M SSS
8 8 A L T <4 S- 0 0 69 127 46 LLLLLLIILLVIIILVPPVVVVPVVVVVVL PPVQEEELLLLELVMMVVMVVVVIII
9 9 A D T > - 0 0 79 128 19 DDDDDDDDDDDDDDDEDDDDDDDDDDDDDVEDDDNEEEDDDDEDEDDEEDDDDNSSS
10 10 A V T < S+ 0 0 7 128 10 VVIIVVVVIIVIIVVVVVVVVVVVVVVVVIVVVVVVVVVVVVVAVITVVVILIVVVV
11 11 A T T 4 S+ 0 0 46 128 35 TTTTTTTTTTAAATTTTTTTTTTTTTTTTpTTTFTTTTTTTTTATDKTTYDGKDHHH
12 12 A E T 4 S+ 0 0 128 128 31 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEeDEESEDDDMMMMDEDQADEQQACQEEE
13 13 A L S < S- 0 0 18 128 1 LLLLLLLLMMLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLLLLLLLLLLLL
14 14 A T - 0 0 68 128 45 SSSSSSTTSSTNSSTTSSSSSSSSSSSTTKTSSTSAAATTTTTSTTTTTTTTTTTTT
15 15 A N S > S+ 0 0 49 128 24 NNNNNNNNNNDNNNSDNNNNNNNNNNNDDEDNNDNDDDDDDDDNDNDDDDNDDNNNN
16 16 A E T 4 S+ 0 0 148 128 15 EEEEEEEEEEEEEEEEEEEEEEEEEEEEERDEEEEEEEQQQQEEEEEAEEEDNEDDD
17 17 A D T >4 S+ 0 0 96 128 41 DDDDDDGGDDDEEEGDAAGGGGAGGGGDDHDAADADDDSSSSDEDEESDQEQEEEEE
18 18 A L T >> S+ 0 0 0 128 10 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLTLLLLLLLLLLLLLLLILLLLILLIIII
19 19 A L H 3X S+ 0 0 63 128 88 QQQQQQKKQQKKKKKKKKKKKKKKKKKKKLKKKKKRRRRRRRRRKRKKKKRKQRVVV
20 20 A D H <> S+ 0 0 115 128 38 EEEEEEDDEEDDENDQEEDDDDEDDDDEEAQEEVEQQQDDDDQEQDEDQGEKQDAAA
21 21 A Q H <4 S+ 0 0 20 128 32 QQQQQQQQQKQQQQEQEELLLLELLLLEEQQEEQEQQQEEEEQQQQHEQEQQQQQQQ
22 22 A L H X>S+ 0 0 0 128 1 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLLLLLLLLLLLLLLLLLLLLLLLLL
23 23 A V H <5S+ 0 0 91 128 54 MMMMLMLLTILLLLLALLLLLLLLLLLVVLELLLLAAALLLLAIAMMLAIMLIMRRR
24 24 A K T <5S+ 0 0 123 128 33 KKKKKKKKKKKRRKKKKKKKKKKKKKKKKRKKKKKKKKSSSSKQKTKKKKTRKISSS
25 25 A Y T 45S- 0 0 72 128 24 YYYYYYYYYYYYYHYYYYYYYYYYYYYFFYHYYYYYYYHHHHYYHYYHHHHYHHFFF
26 26 A G T <5S+ 0 0 70 128 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGG
27 27 A V < - 0 0 19 128 38 IIIIVIVVVVVVVLVVMMLLLLMLLLLYYvVMMIMVVVLLLLVVVCIVVVCVYCMMM
28 28 A N + 0 0 137 128 38 NNNNTSNNNNSNNNNNKKNNNNKNNNNSSgQKKNKDDDDDDDDNEDTNDKDKNDNNN
29 29 A P - 0 0 17 128 34 PPPPPPAAPPVPPPAPPPAAAAPAAAAPPGPPPPPTTTAAAATAVPPATPPAPPPPP
30 30 A G + 0 0 45 128 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGGGGGGGGGGGGGGGGGGGGG
31 31 A P + 0 0 90 128 1 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPSPPPPPPPPPPPPPPPPPPPPPPPPPPP
32 32 A I + 0 0 16 128 6 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIVVIIIIIIIIIIIIVIVIIIIVIIVVVV
33 33 A V >> - 0 0 82 128 20 VVVVLVVVVVVVVVVLLLVVVVLVVVVVVAVLLVLVVVVVVVVTVVVVVVVVIIGGG
34 34 A G T 34 S+ 0 0 50 128 43 AAAAAAAAAAAAGAAASSAAAASAAAAAAGASSASAAAAAAAAAAGAGAAGGPGPPP
35 35 A T T 34 S+ 0 0 117 128 54 TTTTTTSSTTSTTTSTNNSSSSNSSSSTTTSNNSNSSSSSSSSTSSSSSSSSSSSSS
36 36 A T T X> S+ 0 0 22 128 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
37 37 A R H 3X S+ 0 0 43 128 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A K H >4 S+ 0 0 121 128 21 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKNMKKANAQNNNN
39 39 A L H X> S+ 0 0 98 128 19 LLLLILLLLLLLLLLVLLVVVVLVVVVVVLLLLLVLLLLLLLLLLVVLVLVLVVVVV
40 40 A Y H 3X S+ 0 0 46 128 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
41 41 A E H << S+ 0 0 53 128 16 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEAEEAIII
42 42 A K H <> S+ 0 0 69 128 22 KKKKKKKKKKKKKKRDQQKKKKQKKKKKKKKQQKQKKKKKKKRSKNKKKKNRDNKKK
43 43 A K H < S+ 0 0 115 128 18 KKKKKKKKKKKKKKRKRRRRRRRRRRRKKKKRRRRKKKRRRRKKRKKKKKKKKKKKK
44 44 A L T >< S+ 0 0 0 128 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
45 45 A L G >> S+ 0 0 8 128 71 LLLLQLQQLLQLLLQQLLQQQQLQQQQLLLQFFQAQQQQQQQQQQRLQQQRQQREEE
46 46 A K G 3< S+ 0 0 135 128 9 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKRKKKRRRERKKK
47 47 A L G <4 S+ 0 0 92 128 8 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLYYY
48 48 A R T <4 S+ 0 0 14 128 79 MMIIKMLLMMLKKKLRRRLLLLRLLLLLLRLKKLKLLLLLLLLILLMLLVLMILMMM
49 49 A E S < S- 0 0 74 128 30 EEEEEEDDEEDEEEDDEEDDDDEDDDDNNEDEEDEDDDDDDDDEDEGDDDEATESSS
50 50 A Q - 0 0 133 128 31 QQQQQQQQQQQPPSHEQQQQQQQQQQQQQQQQQQQQQQNNNNQQQGQTEPDHQEKKK
51 51 A G - 0 0 47 125 37 GGGGGGGGGGGSSGGVGGGGGGGGGGGDDGGGGPGPPPDDDDPGPGGPHSGPHS
52 52 A T + 0 0 122 124 74 PPPPPPPPPPPQQQPALLPPPPLPPPPSSTPLLPLPPPPPPPPPPSPAA LLKE
53 53 A E S S- 0 0 142 103 44 EEDDAE DD EED DEE E EAAASA GPAESAA EQAS
54 54 A S S S+ 0 0 127 100 66 LLLL L LL LLI SS S SQSSES AIESVEE SSKN
55 55 A R - 0 0 202 97 62 KKKK K KK SSS SS S RPSSTS EPP PTP RK
56 56 A S 0 0 108 96 53 TTSS T AA SSS AA A SSAATA AAE PTA K
57 57 A S 0 0 179 89 46 PPSS P PP PP P SP PS PTA PA S
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 90 7 2 0 0 0 94 0 0 0.366 12 0.80
2 2 A 0 29 3 0 0 0 0 1 16 16 2 3 0 0 0 0 29 1 0 0 94 0 0 1.701 56 0.14
3 3 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 3 2 1 77 0 16 95 0 0 0.780 26 0.70
4 4 A 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 25 1 69 99 0 0 0.803 26 0.60
5 5 A 0 0 0 0 0 0 0 0 1 0 0 4 0 0 1 85 3 4 0 2 102 0 0 0.661 22 0.58
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 88 104 0 0 0.358 11 0.86
7 7 A 1 0 0 1 0 0 2 1 0 0 3 0 0 0 0 0 0 8 1 84 118 0 0 0.681 22 0.68
8 8 A 17 65 7 2 0 0 0 0 0 4 0 0 0 0 0 0 1 3 0 0 127 0 0 1.132 37 0.54
9 9 A 1 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 7 2 88 128 0 0 0.488 16 0.81
10 10 A 90 1 8 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 128 0 0 0.409 13 0.90
11 11 A 0 0 0 0 1 0 1 1 3 1 1 87 0 2 0 2 0 0 0 2 128 0 1 0.662 22 0.65
12 12 A 0 0 0 3 0 0 0 0 2 0 1 0 1 0 0 0 3 83 0 8 128 0 0 0.713 23 0.69
13 13 A 0 98 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.126 4 0.98
14 14 A 0 0 1 0 0 0 0 0 2 0 38 58 0 0 0 1 0 0 1 0 128 0 0 0.886 29 0.54
15 15 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 82 16 128 0 0 0.535 17 0.75
16 16 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 3 91 1 4 128 0 0 0.438 14 0.85
17 17 A 0 0 0 0 0 0 0 9 5 0 4 0 0 1 0 0 2 20 0 59 128 0 0 1.240 41 0.59
18 18 A 0 95 5 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 128 0 0 0.235 7 0.90
19 19 A 2 52 0 0 0 0 0 0 0 0 0 0 0 0 9 25 11 0 0 0 128 0 0 1.237 41 0.11
20 20 A 1 0 0 0 0 0 0 2 3 0 1 0 1 0 0 1 7 23 1 62 128 0 0 1.184 39 0.61
21 21 A 0 6 0 0 0 0 0 0 0 0 0 0 0 1 0 1 80 13 0 0 128 0 0 0.690 23 0.68
22 22 A 0 99 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.046 1 0.99
23 23 A 55 23 3 8 0 0 0 0 5 0 0 2 0 0 2 0 0 1 0 0 128 0 0 1.350 45 0.45
24 24 A 0 0 1 0 0 0 0 0 0 0 5 2 0 0 15 77 1 0 0 0 128 0 0 0.787 26 0.66
25 25 A 0 0 0 0 4 0 85 0 0 0 0 0 0 11 0 0 0 0 0 0 128 0 0 0.506 16 0.75
26 26 A 0 0 0 0 0 0 0 98 0 0 1 0 0 0 0 0 0 0 0 1 128 0 0 0.091 3 0.98
27 27 A 70 10 8 7 0 0 2 1 0 0 0 0 2 0 0 0 0 0 0 0 128 0 2 1.085 36 0.61
28 28 A 0 0 0 0 0 0 0 1 0 0 3 2 0 0 0 6 1 1 77 9 128 0 0 0.910 30 0.61
29 29 A 2 0 0 0 0 0 0 1 14 80 0 4 0 0 0 0 0 0 0 0 128 0 0 0.686 22 0.66
30 30 A 0 0 0 0 0 0 0 99 0 0 1 0 0 0 0 0 0 0 0 0 128 0 0 0.046 1 0.98
31 31 A 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 0 0 0 0 0 128 0 0 0.046 1 0.98
32 32 A 7 0 93 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.254 8 0.94
33 33 A 88 6 2 0 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 128 0 0 0.512 17 0.80
34 34 A 0 0 0 0 0 0 0 57 34 3 5 0 0 0 0 0 0 1 0 0 128 0 0 0.977 32 0.57
35 35 A 0 0 0 0 0 0 0 0 0 0 27 68 0 0 0 0 0 0 5 0 128 0 0 0.760 25 0.46
36 36 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 128 0 0 0.000 0 1.00
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 128 0 0 0.000 0 1.00
38 38 A 0 0 0 1 0 0 0 0 2 0 0 0 0 0 0 92 1 0 5 0 128 0 0 0.359 11 0.79
39 39 A 16 83 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.491 16 0.81
40 40 A 0 0 0 0 0 0 99 0 0 0 0 0 1 0 0 0 0 0 0 0 128 0 0 0.046 1 0.99
41 41 A 0 0 2 0 0 0 0 0 2 0 0 0 0 0 0 0 0 95 0 0 128 0 0 0.222 7 0.83
42 42 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 2 88 5 0 2 2 128 0 0 0.532 17 0.77
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 83 0 0 1 0 128 0 0 0.491 16 0.82
44 44 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.000 0 1.00
45 45 A 0 68 0 0 2 0 0 0 1 0 0 0 0 0 2 0 25 2 0 0 128 0 0 0.888 29 0.28
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 95 0 1 0 0 128 0 0 0.235 7 0.91
47 47 A 0 97 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 128 0 0 0.157 5 0.91
48 48 A 1 23 3 10 0 0 0 0 0 0 0 0 0 0 56 6 0 0 0 0 128 0 0 1.215 40 0.20
49 49 A 0 0 0 0 0 0 0 1 1 0 2 1 0 0 0 0 0 72 2 22 128 0 0 0.836 27 0.70
50 50 A 0 0 0 0 0 0 0 1 0 2 1 1 0 3 0 2 84 2 3 1 128 0 0 0.782 26 0.68
51 51 A 2 0 0 0 0 0 0 81 0 6 4 0 0 2 1 0 0 0 0 5 125 0 0 0.794 26 0.62
52 52 A 0 8 0 0 0 0 0 0 4 31 2 50 0 0 0 1 2 1 0 0 124 0 0 1.301 43 0.26
53 53 A 0 0 0 0 0 0 0 2 9 1 3 0 0 0 0 0 1 77 0 8 103 0 0 0.884 29 0.56
54 54 A 1 12 2 0 0 0 0 0 1 0 77 0 0 0 0 1 1 4 1 0 100 0 0 0.893 29 0.34
55 55 A 0 0 0 0 0 0 0 0 0 5 9 2 0 0 71 11 0 1 0 0 97 0 0 0.990 33 0.38
56 56 A 0 0 0 0 0 0 0 0 11 1 77 8 0 0 0 1 0 1 0 0 96 0 0 0.799 26 0.47
57 57 A 0 0 0 0 0 0 0 0 2 17 80 1 0 0 0 0 0 0 0 0 89 0 0 0.616 20 0.53
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
51 28 146 1 gVn
100 12 114 2 pLIe
100 28 132 1 vIg
//