Complet list of 1gb4 hssp file
Complete list of 1gb4.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1GB4
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER HYPERTHERMOPHILE 19-JAN-98 1GB4
COMPND MOL_ID: 1; MOLECULE: GB1-C3B4; CHAIN: A; FRAGMENT: B1 DOMAIN; ENGINEER
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: STREPTOCOCCUS SP.; ORGANISM_TAXID: 132
AUTHOR S.M.MALAKAUSKAS,S.L.MAYO
DBREF 1GB4 A 2 57 UNP P19909 SPG2_STRSG 372 427
SEQLENGTH 57
NCHAIN 1 chain(s) in 1GB4 data set
NALIGN 28
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q54181_STRSG2OED 0.86 0.95 1 57 59 115 57 0 0 185 Q54181 Protein G' OS=Streptococcus sp. group G GN=Protein G'gene PE=1 SV=1
2 : C5WHI8_STRDG 0.81 0.88 1 57 371 427 57 0 0 523 C5WHI8 Immunoglobulin G-binding protein OS=Streptococcus dysgalactiae subsp. equisimilis (strain GGS_124) GN=spg PE=3 SV=1
3 : E8QBR8_STRED 0.81 0.88 1 57 296 352 57 0 0 448 E8QBR8 IgG binding protein Zag OS=Streptococcus dysgalactiae subsp. equisimilis (strain ATCC 12394 / D166B) GN=SDE12394_07285 PE=3 SV=1
4 : F5U588_STREQ 0.81 0.88 1 57 87 143 57 0 0 239 F5U588 Putative immunoglobulin G-binding protein G (Fragment) OS=Streptococcus dysgalactiae subsp. equisimilis SK1249 GN=HMPREF9964_0770 PE=4 SV=1
5 : F9NHM5_STREQ 0.81 0.88 1 57 270 326 57 0 0 422 F9NHM5 Immunoglobulin G-binding protein G OS=Streptococcus dysgalactiae subsp. equisimilis SK1250 GN=spg PE=4 SV=1
6 : K4Q980_STREQ 0.81 0.88 1 57 371 427 57 0 0 523 K4Q980 Immunoglobulin G-binding protein G OS=Streptococcus dysgalactiae subsp. equisimilis AC-2713 GN=spg PE=3 SV=1
7 : M4YXE4_STREQ 0.81 0.88 1 57 308 364 57 0 0 460 M4YXE4 Immunoglobulin G-binding protein OS=Streptococcus dysgalactiae subsp. equisimilis RE378 GN=spg PE=3 SV=1
8 : Q53291_FINMA2ZW0 0.81 0.88 1 57 398 454 57 0 0 455 Q53291 Protein LG (Fragment) OS=Finegoldia magna PE=1 SV=1
9 : Q53337_9STRE 0.81 0.88 1 57 1 57 57 0 0 60 Q53337 Protein G IgG Fc binding domain OS=Streptococcus sp. CMCC 32138 GN=PGFB PE=4 SV=1
10 : SPG1_STRSG 2RPV 0.81 0.88 1 57 296 352 57 0 0 448 P06654 Immunoglobulin G-binding protein G OS=Streptococcus sp. group G GN=spg PE=1 SV=1
11 : SPG2_STRSG 1ZXH 0.81 0.88 1 57 441 497 57 0 0 593 P19909 Immunoglobulin G-binding protein G OS=Streptococcus sp. group G GN=spg PE=1 SV=1
12 : U3TN53_STREQ 0.81 0.88 1 57 397 453 57 0 0 532 U3TN53 Immunoglobulin G-binding protein OS=Streptococcus dysgalactiae subsp. equisimilis 167 GN=SDSE167_1496 PE=4 SV=1
13 : E7Q004_STRDY 0.79 0.88 1 57 362 418 57 0 0 519 E7Q004 Ig, alpha2-macroglobulin and albumin binding protein Zag OS=Streptococcus dysgalactiae subsp. dysgalactiae ATCC 27957 GN=SDD27957_06725 PE=3 SV=1
14 : Q53974_STRDY 0.79 0.88 1 57 256 312 57 0 0 413 Q53974 Mag protein (Precursor) OS=Streptococcus dysgalactiae GN=mag PE=3 SV=1
15 : Q53975_STRDY 0.79 0.88 1 57 502 558 57 0 0 664 Q53975 Streptococcal surface protein (Precursor) OS=Streptococcus dysgalactiae GN=mig PE=3 SV=1
16 : Q93EM8_STRDY 0.77 0.86 1 57 502 558 57 0 0 669 Q93EM8 Mig (Precursor) OS=Streptococcus dysgalactiae PE=3 SV=1
17 : B4U242_STREM 0.67 0.84 1 57 314 370 57 0 0 445 B4U242 IgG binding protein Zag OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=zag PE=3 SV=1
18 : Q76K19_STRSZ 0.67 0.84 1 57 302 358 57 0 0 433 Q76K19 Cell surface protein OS=Streptococcus equi subsp. zooepidemicus GN=zag PE=3 SV=2
19 : T0I4N1_STRSZ 0.67 0.84 1 57 302 358 57 0 0 433 T0I4N1 IgG binding protein Zag OS=Streptococcus equi subsp. zooepidemicus S31A1 GN=zag PE=3 SV=1
20 : C0MA37_STRE4 0.65 0.84 1 57 298 354 57 0 0 429 C0MA37 Ig, alpha2-macroglobulin and albumin binding protein Eag OS=Streptococcus equi subsp. equi (strain 4047) GN=SEQ_0721 PE=3 SV=1
21 : C0MCK9_STRS7 0.65 0.84 1 57 298 354 57 0 0 429 C0MCK9 Ig, alpha2-macroglobulin and albumin binding protein Zag (Precursor) OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=SZO_13070 PE=3 SV=1
22 : F8INR7_STREC 0.65 0.84 1 57 298 354 57 0 0 429 F8INR7 Cell surface protein OS=Streptococcus equi subsp. zooepidemicus (strain ATCC 35246 / C74-63) GN=SeseC_00850 PE=3 SV=1
23 : Q56212_STRSZ 0.65 0.84 1 57 298 354 57 0 0 429 Q56212 Cell surface protein (Precursor) OS=Streptococcus equi subsp. zooepidemicus PE=3 SV=1
24 : K9E8M0_9LACT 0.50 0.70 15 57 458 501 44 1 1 598 K9E8M0 YSIRK family Gram-positive signal peptide (Fragment) OS=Alloiococcus otitis ATCC 51267 GN=HMPREF9698_01324 PE=4 SV=1
25 : K9EAV4_9LACT 0.40 0.64 9 57 344 393 50 1 1 513 K9EAV4 YSIRK family Gram-positive signal peptide OS=Alloiococcus otitis ATCC 51267 GN=HMPREF9698_01330 PE=4 SV=1
26 : K9EBI3_9LACT 0.40 0.61 2 57 190 246 57 1 1 562 K9EBI3 Uncharacterized protein (Fragment) OS=Alloiococcus otitis ATCC 51267 GN=HMPREF9698_00508 PE=4 SV=1
27 : K9EBV2_9LACT 0.39 0.74 13 57 904 949 46 1 1 1115 K9EBV2 Uncharacterized protein OS=Alloiococcus otitis ATCC 51267 GN=HMPREF9698_00205 PE=4 SV=1
28 : E4KPW8_9LACT 0.38 0.61 3 57 43 98 56 1 1 100 E4KPW8 B domain protein OS=Eremococcus coleocola ACS-139-V-Col8 GN=HMPREF9257_1607 PE=4 SV=1
## ALIGNMENTS 1 - 28
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 223 24 31 VVVVVVVVMVVVLLLLLLLLLLL
2 2 A T + 0 0 52 25 0 TTTTTTTTTTTTTTTTTTTTTTT T
3 3 A T E -A 20 0A 62 26 22 TTTTTTTTTTTTTTTTTTTTTTT L T
4 4 A F E -A 19 0A 6 26 0 YYYYYYYYYYYYYYYYYYYYYYY Y Y
5 5 A K E -b 52 0B 86 26 54 KKKKKKKKKKKKKKKKRRRRRRR Y K
6 6 A L E -b 53 0B 0 26 4 LLLLLLLLLLLLLLLLLLLLLLL F L
7 7 A I E -bC 54 16B 66 26 20 VVVVVVVVVVVVVVVVVVVVVVV A V
8 8 A I E -b 55 0B 12 26 30 IIIIIIIIIIIIIIIIIIIIIII Q V
9 9 A N E +b 56 0B 96 27 50 NNNNNNNNNNNNNNNNKKKKKKK NR N
10 10 A G S S- 0 0 26 27 35 GGGGGGGGGGGGGGGGGGGGGGG TT S
11 11 A K S S+ 0 0 172 27 72 KKKKKKKKKKKKKKKKVVVVVAV KK E
12 12 A T S S- 0 0 34 27 39 TTTTTTTTTTTTTTTTTTTTTTT GG D
13 13 A L - 0 0 44 28 78 LLLLLLLLLLLLLLLLFFFFFFF KKKA
14 14 A K + 0 0 175 28 73 KKKKKKKKKKKKKKKKSSSSSSS NNNQ
15 15 A G S S- 0 0 35 29 17 GGGGGGGGGGGGGGGGGGGGGGGGGGGI
16 16 A E B -C 7 0B 106 29 50 EEEEEEEEEEEEEEEEEEEEEEEAAAAT
17 17 A I - 0 0 78 29 18 TTTTTTTTTTTTTTTTTTTTTTTTTTTS
18 18 A T + 0 0 73 29 45 TTTTTTTTTTTTTTTTAAAASAATTTTE
19 19 A I E -A 4 0A 36 29 61 TTTTTTTTTTTTTTTTTTTTTTTVVVVY
20 20 A E E +A 3 0A 149 29 22 EKKKKKKKKKKKKKKKKKKKKKKKKKKT
21 21 A A - 0 0 7 29 3 AAAAAAAATAAAAAAAAAAAAAAAAAAA
22 22 A V S S- 0 0 85 29 64 VVVVVVVVVVVVVVVVVVVVVVVSSKGS
23 23 A D S > S- 0 0 96 29 49 DDDDDDDDDDDDDDDDDDDDDDDSSSNS
24 24 A A H > S+ 0 0 14 29 33 AAAAAAAAAAAAAAAVAAAAAAAAPAPV
25 25 A A H > S+ 0 0 68 29 42 AEEEEEEEEEEEEEEEAAAAAAAEEEEE
26 26 A E H > S+ 0 0 94 29 62 TTTTTTTTTTTTTTTTTTTTTTTQEEEL
27 27 A A H X S+ 0 0 0 29 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAA
28 28 A E H X S+ 0 0 67 29 20 EEEEEEEEEEEEEEEEEEEEEEEEKEEG
29 29 A K H X S+ 0 0 142 29 59 KKKKKKKKKKKKKKKKQQQQQQQKATKQ
30 30 A I H >X S+ 0 0 59 29 92 VAAAAAAAAAAAAAAATTTTTAAYYYYY
31 31 A F H 3X S+ 0 0 1 29 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFF
32 32 A K H 3< S+ 0 0 85 29 38 KKKKKKKKKKKKKKKKRRRRRRRKEKRR
33 33 A Q H X>S+ 0 0 0 29 21 AAAAAAAAAAAAAAAAAAAAAAAVAAAV
36 36 A N H 345S+ 0 0 99 29 21 NNNNNNNNNNNNNNNNNNNNNNNNKNSN
37 37 A D H 3<5S+ 0 0 123 29 25 DDDDDDDDDDDDEEEEDDDDDDDEEEEN
38 38 A N H <<5S- 0 0 103 29 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNN
39 39 A G T <5 + 0 0 41 29 14 GGGGGGGGGGGGGGGGGGGGGGGGDDGG
40 40 A I < + 0 0 1 29 32 VVVVVVVVVVVVVVVVIIIVVVVLLLLL
41 41 A D + 0 0 110 29 61 DDDDDDDDDDDDDDDDTTTTTTTggggg
42 42 A G S S- 0 0 29 29 80 GGGGGGGGGGGGGGGGGGGGGGGlllll
43 43 A E - 0 0 126 29 83 EVVVVVVVVVVVVVVVEEEEEEEEDKDE
44 44 A W + 0 0 46 29 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWW
45 45 A T - 0 0 70 29 60 TTTTTTTTTTTTTTTTAAAAAAASTSAS
46 46 A Y - 0 0 87 29 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYY
47 47 A D B >>> -D 52 0B 60 29 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDD
48 48 A D T 345S+ 0 0 126 29 61 DDDDDDDDDDDDDDDDTTTAAAAEEEEP
49 49 A A T 345S+ 0 0 83 29 39 AAAAAAAAAAAAAAAAAAAAAAADDESA
50 50 A T T <45S- 0 0 75 29 10 TTTTTTTTTTTTTTTTTTTTTTTTTTST
51 51 A K T <5S+ 0 0 103 29 26 KKKKKKKKKKKKKKKKKKKKKKKKKKRY
52 52 A T E < -bD 5 47B 8 29 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTT
53 53 A F E -b 6 0B 2 29 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFF
54 54 A T E -b 7 0B 33 29 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTT
55 55 A V E -b 8 0B 0 29 52 VVVVVVVVVVVVVVVVVVVVVVVAAAAA
56 56 A T E b 9 0B 38 29 51 TTTTTTTTTTTTTTTTTTTTTTTIRRRT
57 57 A E 0 0 92 29 4 EEEEEEEEEEEEEEEEEEEEEEEEEEED
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 46 46 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 24 0 0 0.922 30 0.68
2 2 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 25 0 0 0.000 0 1.00
3 3 A 0 4 0 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 0 0 26 0 0 0.163 5 0.78
4 4 A 0 0 0 0 4 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0.163 5 0.99
5 5 A 0 0 0 0 0 0 4 0 0 0 0 0 0 0 27 69 0 0 0 0 26 0 0 0.733 24 0.46
6 6 A 0 96 0 0 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0.163 5 0.96
7 7 A 92 0 4 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 0 26 0 0 0.325 10 0.80
8 8 A 4 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 26 0 0 0.325 10 0.70
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 26 0 0 70 0 27 0 0 0.719 24 0.50
10 10 A 0 0 0 0 0 0 0 89 0 0 4 7 0 0 0 0 0 0 0 0 27 0 0 0.420 14 0.64
11 11 A 22 0 0 0 0 0 0 0 4 0 0 0 0 0 0 70 0 4 0 0 27 0 0 0.826 27 0.28
12 12 A 0 0 0 0 0 0 0 7 0 0 0 89 0 0 0 0 0 0 0 4 27 0 0 0.420 14 0.60
13 13 A 0 61 0 0 25 0 0 0 4 0 0 0 0 0 0 11 0 0 0 0 28 0 0 1.008 33 0.21
14 14 A 0 0 0 0 0 0 0 0 0 0 25 0 0 0 0 61 4 0 11 0 28 0 0 1.008 33 0.26
15 15 A 0 0 3 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.150 5 0.82
16 16 A 0 0 0 0 0 0 0 0 14 0 0 3 0 0 0 0 0 83 0 0 29 0 0 0.546 18 0.49
17 17 A 0 0 3 0 0 0 0 0 0 0 3 93 0 0 0 0 0 0 0 0 29 0 0 0.299 9 0.82
18 18 A 0 0 0 0 0 0 0 0 21 0 3 72 0 0 0 0 0 3 0 0 29 0 0 0.792 26 0.54
19 19 A 14 0 3 0 0 0 3 0 0 0 0 79 0 0 0 0 0 0 0 0 29 0 0 0.689 23 0.38
20 20 A 0 0 0 0 0 0 0 0 0 0 0 3 0 0 0 90 0 7 0 0 29 0 0 0.398 13 0.78
21 21 A 0 0 0 0 0 0 0 0 97 0 0 3 0 0 0 0 0 0 0 0 29 0 0 0.150 5 0.96
22 22 A 83 0 0 0 0 0 0 3 0 0 10 0 0 0 0 3 0 0 0 0 29 0 0 0.624 20 0.36
23 23 A 0 0 0 0 0 0 0 0 0 0 14 0 0 0 0 0 0 0 3 83 29 0 0 0.546 18 0.51
24 24 A 7 0 0 0 0 0 0 0 86 7 0 0 0 0 0 0 0 0 0 0 29 0 0 0.497 16 0.67
25 25 A 0 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 0 69 0 0 29 0 0 0.619 20 0.57
26 26 A 0 3 0 0 0 0 0 0 0 0 0 79 0 0 0 0 3 14 0 0 29 0 0 0.689 23 0.38
27 27 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
28 28 A 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 0 93 0 0 29 0 0 0.299 9 0.79
29 29 A 0 0 0 0 0 0 0 0 3 0 0 3 0 0 0 66 28 0 0 0 29 0 0 0.865 28 0.40
30 30 A 3 0 3 0 0 0 17 0 59 0 0 17 0 0 0 0 0 0 0 0 29 0 0 1.151 38 0.07
31 31 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 31 66 0 3 0 0 29 0 0 0.756 25 0.62
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83 3 10 3 29 0 0 0.624 20 0.59
34 34 A 0 0 0 0 10 3 86 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.479 15 0.94
35 35 A 7 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.251 8 0.78
36 36 A 0 0 0 0 0 0 0 0 0 0 3 0 0 0 0 3 0 0 93 0 29 0 0 0.299 9 0.79
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 3 69 29 0 0 0.728 24 0.75
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 29 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 93 0 0 0 0 0 0 0 0 0 0 0 7 29 0 0 0.251 8 0.86
40 40 A 69 17 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.833 27 0.67
41 41 A 0 0 0 0 0 0 0 17 0 0 0 24 0 0 0 0 0 0 0 59 29 0 5 0.959 32 0.39
42 42 A 0 17 0 0 0 0 0 83 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.460 15 0.20
43 43 A 52 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 38 0 7 29 0 0 1.009 33 0.17
44 44 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
45 45 A 0 0 0 0 0 0 0 0 28 0 10 62 0 0 0 0 0 0 0 0 29 0 0 0.886 29 0.40
46 46 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 29 0 0 0.000 0 1.00
48 48 A 0 0 0 0 0 0 0 0 14 3 0 10 0 0 0 0 0 14 0 59 29 0 0 1.210 40 0.39
49 49 A 0 0 0 0 0 0 0 0 86 0 3 0 0 0 0 0 0 3 0 7 29 0 0 0.545 18 0.60
50 50 A 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 29 0 0 0.150 5 0.89
51 51 A 0 0 0 0 0 0 3 0 0 0 0 0 0 0 3 93 0 0 0 0 29 0 0 0.299 9 0.73
52 52 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
53 53 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
54 54 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 29 0 0 0.000 0 1.00
55 55 A 83 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 0 0 0 29 0 0 0.460 15 0.48
56 56 A 0 0 3 0 0 0 0 0 0 0 0 86 0 0 10 0 0 0 0 0 29 0 0 0.479 15 0.48
57 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 97 0 3 29 0 0 0.150 5 0.95
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
24 28 485 1 gDl
25 34 377 1 gEl
26 41 230 1 gDl
27 30 933 1 gDl
28 40 82 1 gDl
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