Complet list of 1g84 hssp file
Complete list of 1g84.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1G84
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER IMMUNE SYSTEM 16-NOV-00 1G84
COMPND MOL_ID: 1; MOLECULE: IMMUNOGLOBULIN E; CHAIN: A; FRAGMENT: C EPSILON2;
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR J.M.MCDONNELL,D.COWBURN,H.J.GOULD,B.J.SUTTON,R.CALVERT, R.E.BEAVIL,A.J
DBREF 1G84 A 1 105 UNP P01854 IGHE_HUMAN 106 210
SEQLENGTH 105
NCHAIN 1 chain(s) in 1G84 data set
NALIGN 39
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : IGHE_HUMAN 0.98 0.98 1 105 106 210 105 0 0 428 P01854 Ig epsilon chain C region OS=Homo sapiens GN=IGHE PE=1 SV=1
2 : G3SFN9_GORGO 0.96 0.98 1 105 106 210 105 0 0 438 G3SFN9 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla PE=4 SV=1
3 : H2NMG6_PONAB 0.94 0.97 2 104 104 206 103 0 0 488 H2NMG6 Uncharacterized protein (Fragment) OS=Pongo abelii GN=IGHE PE=4 SV=1
4 : G7MWV7_MACMU 0.80 0.95 1 105 106 210 105 0 0 428 G7MWV7 Putative uncharacterized protein (Fragment) OS=Macaca mulatta GN=EGK_18623 PE=4 SV=1
5 : G8F4W7_MACFA 0.80 0.95 1 105 106 210 105 0 0 429 G8F4W7 Putative uncharacterized protein (Fragment) OS=Macaca fascicularis GN=EGM_20642 PE=4 SV=1
6 : H9H4Y2_MACMU 0.77 0.94 1 105 106 210 105 0 0 428 H9H4Y2 Uncharacterized protein (Fragment) OS=Macaca mulatta GN=IGHE PE=4 SV=1
7 : F7HXZ6_CALJA 0.70 0.85 1 105 104 208 105 0 0 426 F7HXZ6 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=IGHE PE=4 SV=1
8 : H9GZV0_HORSE 0.51 0.75 4 105 104 206 103 1 1 425 H9GZV0 Uncharacterized protein (Fragment) OS=Equus caballus GN=IGHE PE=4 SV=1
9 : H0X0P0_OTOGA 0.48 0.74 1 105 101 206 106 1 1 465 H0X0P0 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=IGHE PE=4 SV=1
10 : G1SK63_RABIT 0.47 0.71 1 105 102 207 106 1 1 427 G1SK63 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=IGHE PE=4 SV=2
11 : L8YCL8_TUPCH 0.47 0.75 3 105 98 201 104 1 1 492 L8YCL8 Ig epsilon chain C (Fragment) OS=Tupaia chinensis GN=TREES_T100018134 PE=4 SV=1
12 : M3WR60_FELCA 0.47 0.75 1 105 103 208 106 1 1 428 M3WR60 Uncharacterized protein (Fragment) OS=Felis catus GN=IGHE PE=4 SV=1
13 : F1PP29_CANFA 0.46 0.71 3 105 104 207 104 1 1 440 F1PP29 Uncharacterized protein (Fragment) OS=Canis familiaris GN=IGHE PE=4 SV=1
14 : F6TMA3_ORNAN 0.45 0.76 1 92 104 197 94 2 2 431 F6TMA3 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=IGHE PE=4 SV=1
15 : F6YPV0_MONDO 0.45 0.71 4 105 96 199 104 2 2 417 F6YPV0 Uncharacterized protein OS=Monodelphis domestica GN=IGHE PE=4 SV=2
16 : G3VT82_SARHA 0.44 0.72 1 105 104 210 107 2 2 463 G3VT82 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=IGHE PE=4 SV=1
17 : L5JR68_PTEAL 0.44 0.75 1 105 135 240 106 1 1 460 L5JR68 Ig epsilon chain C region OS=Pteropus alecto GN=PAL_GLEAN10020985 PE=4 SV=1
18 : M3Y994_MUSPF 0.43 0.73 1 105 85 190 106 1 1 410 M3Y994 Uncharacterized protein OS=Mustela putorius furo GN=IGHE PE=4 SV=1
19 : G1PUM3_MYOLU 0.42 0.68 3 105 112 215 104 1 1 443 G1PUM3 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=IGHE PE=4 SV=1
20 : G3N342_BOVIN 0.42 0.71 1 105 100 205 106 1 1 426 G3N342 Uncharacterized protein (Fragment) OS=Bos taurus GN=IGHE PE=4 SV=1
21 : L5MGL4_MYODS 0.42 0.70 1 105 106 211 106 1 1 432 L5MGL4 Ig epsilon chain C region OS=Myotis davidii GN=MDA_GLEAN10010378 PE=4 SV=1
22 : L8HLX3_9CETA 0.42 0.71 1 105 108 213 106 1 1 469 L8HLX3 Ig epsilon chain C region (Fragment) OS=Bos mutus GN=M91_08148 PE=4 SV=1
23 : I3MYB8_SPETR 0.41 0.66 1 105 102 206 106 2 2 460 I3MYB8 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=IGHE PE=4 SV=1
24 : K7ZJQ0_PIG 0.41 0.67 1 105 98 203 106 1 1 424 K7ZJQ0 IgE heavy chain constant region (Fragment) OS=Sus scrofa GN=IGHE PE=4 SV=1
25 : I3LLF9_PIG 0.40 0.66 1 105 99 204 106 1 1 353 I3LLF9 Uncharacterized protein (Fragment) OS=Sus scrofa GN=IGHE PE=4 SV=1
26 : S7MCI3_MYOBR 0.40 0.69 1 105 106 211 106 1 1 358 S7MCI3 Ig epsilon chain C region OS=Myotis brandtii GN=D623_10004156 PE=4 SV=1
27 : S9YDU1_9CETA 0.39 0.58 2 105 141 213 104 1 31 503 S9YDU1 Ig gamma-3 chain C region OS=Camelus ferus GN=CB1_000355002 PE=4 SV=1
28 : W5PGT9_SHEEP 0.38 0.70 1 105 45 150 106 1 1 371 W5PGT9 Uncharacterized protein OS=Ovis aries GN=IGHE PE=4 SV=1
29 : K7G1C6_PELSI 0.36 0.64 25 104 51 131 81 1 1 134 K7G1C6 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
30 : HVC2_HETFR 0.35 0.54 7 96 107 196 91 2 2 438 P23085 Ig heavy chain C region (Fragment) OS=Heterodontus francisci PE=2 SV=1
31 : IGHE_RAT 0.35 0.60 26 105 121 201 81 1 1 429 P01855 Ig epsilon chain C region OS=Rattus norvegicus PE=2 SV=1
32 : M9MMM6_RAT 0.35 0.60 26 105 120 200 81 1 1 428 M9MMM6 Protein Ighe (Fragment) OS=Rattus norvegicus GN=Ighe PE=4 SV=1
33 : K7G391_PELSI 0.33 0.63 7 104 30 127 99 2 2 130 K7G391 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
34 : J9V8T1_TRASC 0.32 0.47 12 96 5 87 85 1 2 208 J9V8T1 Short sIgD (Fragment) OS=Trachemys scripta elegans PE=2 SV=1
35 : J7HY15_ALLSI 0.31 0.58 8 90 1 80 83 2 3 93 J7HY15 MHC class II beta chain (Fragment) OS=Alligator sinensis PE=4 SV=1
36 : J9UY31_TRASC 0.31 0.47 12 96 5 87 85 1 2 208 J9UY31 Short sIgD (Fragment) OS=Trachemys scripta elegans PE=2 SV=1
37 : K7GDK5_PELSI 0.31 0.58 6 96 222 316 95 3 4 401 K7GDK5 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
38 : K7GDM8_PELSI 0.31 0.54 5 94 2 89 90 2 2 382 K7GDM8 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
39 : D2I7I9_AILME 0.30 0.62 7 98 11 101 93 2 3 110 D2I7I9 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_021901 PE=4 SV=1
## ALIGNMENTS 1 - 39
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A S 0 0 175 22 57 SS SSSS SS T S TAA AATPTTA A
2 2 A R + 0 0 239 24 71 RRRRRRR TV M K MTM KTKSKKTRK
3 3 A D + 0 0 155 27 37 DDDNNND HSNNND TNNNNNNNNNNDN
4 4 A F S S- 0 0 110 29 42 FFFFFFVFFFFFFPIVYFVFVFFFVVFF
5 5 A T - 0 0 39 30 56 TTTTTTETSTAIIIIITSTSTSTTTTPS T
6 6 A P - 0 0 96 31 65 PPPPPPTPLPLPPPPPQPQDQDGDDQED PA
7 7 A P - 0 0 51 34 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPP P P PPP
8 8 A T E -A 33 0A 78 35 52 TTTTTTTTVATTTTTTTSTSTSDSSTSS P T T RSS
9 9 A V E -A 32 0A 20 35 18 VVVVVVVVVVVVVVVVVVVVVVVLLVVV T V P VVV
10 10 A K E -A 31 0A 121 35 55 KKKKKKKKKRKKKKKKKKRKRKTRRRKR V N K YFT
11 11 A I E -A 30 0A 42 35 32 IIIIIIILLLLLLLLLLLLLLLLFFLLL I L V LPL
12 12 A L E -A 29 0A 81 37 24 LLLLLLLFFFFFFLFFLFYFYFFFFYFF L FLKLLLF
13 13 A Q E -A 28 0A 89 37 77 QQQQQQQHHHHHHHHHHHHYHYHYYHHY T PVVVRAP
14 14 A S E +A 27 0A 36 37 32 SSSSSSSSSSSSSSSSSSTSSSSSSSSS Q PPSPPSP
15 15 A S S > S+ 0 0 69 36 24 SSSSSSSSSSSSSSSSSSSSSSSSSSSS S .CPCHCS
16 16 A S T 3 S+ 0 0 123 37 23 CCCCCCCCCCCCCCCCCCCCCCCCCCCC S SCTCPCS
17 17 A D T 3 + 0 0 133 37 46 DDDDDDDDDDDNNDDDDNDNDNDDDDND S STKTETE
18 18 A G < - 0 0 73 37 61 GGGDDDGPPPPPPPPSPPPPPPPPPPPP E EQSQESE
19 19 A G - 0 0 64 36 86 GGGDDDGGNRSLVRRRSLSNSN.HHSDS E ETGTLTL
20 20 A G S S+ 0 0 74 37 35 GGGGGGGGEEGGGGGGGGGGGGSGGGGG I LGAGSSG
21 21 A H S S+ 0 0 177 36 60 HHHHHHHDGNDDDDDDDDDDDDGDDDDD T QSQSNR.
22 22 A F S S- 0 0 193 36 79 FLFFFFFSTDTTTSAATTTTTTSAATTT S TAAANT.
23 23 A P - 0 0 92 37 71 PPPPPPPHSTHGHQHHHHHQHQHQQHHH R KPHPGCA
24 24 A P + 0 0 83 37 73 PPPPPPPTSYTSTASSATTTATSAAATT R NPPPDRN
25 25 A T E - B 0 76A 53 38 53 TTTTTTTTTTTTTSTTTTTTTTVTTTTTKF KDDDSDK
26 26 A I E - B 0 75A 1 40 46 IIIIIIVIVVIIIIIIVIIIIIIIIIIIAAIIATTTVRA
27 27 A Q E +AB 14 74A 90 39 51 QQQQQQQQQQQQQEQQQQQHQHQHHQQQTTQQTS.SSQT
28 28 A L E +A 13 0A 1 40 6 LLLLLLLLLLLLLLLMLLLLLLLLLLLLLVLLLLLLLVL
29 29 A L E -A 12 0A 52 40 53 LLLLLLLLLLLLLLLILLLLLLYRRLLLVLYYVAIATVV
30 30 A a E -A 11 0A 1 40 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
31 31 A L E +AC 10 70A 41 40 40 LLLLLLLLLLLLLLLLLLLRLRLYYLLRLSFFLLSFLLL
32 32 A V E +AC 9 69A 0 40 18 VVVIIIVIIIIIIIVVIIIIIIIIIIIILIVVLVVVVVV
33 33 A S E +A 8 0A 20 40 55 SSSSSSSSSSSSSTSSSSTSTSSSSTSSGIYYGTTTRTS
34 34 A G S S+ 0 0 7 40 27 GGGGGGGDSGGGGSGGDGDGDGGGGDGGSDGGSGGGGGD
35 35 A Y S S+ 0 0 1 40 13 YYYYYYYYYYYYYYFFFYFYFYYYYFYYFFHHFYFYFFF
36 36 A T S S- 0 0 8 40 73 TTTTTTTTSTTVVSSSTVTTTTTTTTTTYHIIYLYLFSY
37 37 A P S S+ 0 0 97 40 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPQQPPPPPPP
38 38 A G S S- 0 0 42 40 32 GGGGGGGGGGGGGAAAGGGGGGGGGGGGGENNGSGSESG
39 39 A T - 0 0 22 40 69 TTTAAADDADDDDGKSDDDKDKDKKDRKSSDDSPGPDSA
40 40 A I - 0 0 23 40 28 IIIIIIVIIILMMIVVIMLILILMMLIIVIVVVVIVIVV
41 41 A N E -E 91 0B 95 40 68 NNNNNNNDKEEEEQHKEEEKKKMKKKQKQTSSQNENSKT
42 42 A I E +E 90 0B 40 39 11 IIIVVVIIVVVVVVVVVVVVVVVVVV.VVVIIVIVIVIV
43 43 A T E -E 89 0B 64 39 55 TTTTTTTVTTTTIDTTTITTTTTTTT.TTSHHTKKKKQA
44 44 A W E -E 88 0B 28 39 0 WWWWWWWWWWWWWWWWWWWWWWWWWW.WWWWWWWWWWWW
45 45 A L E -E 87 0B 77 39 42 LLLLLLLLLLLLLLLLLLLLLLLLLL.LKLLLKNLNMNK
46 46 A E E -E 86 0B 43 39 80 EEEEEEQIVVVVVVVVVVVVVVKVVV.VAKMMASKSQSA
47 47 A D E +E 85 0B 99 39 22 DDDNNNDDDDNDDDDDDDDDDDDDDD.DDDDDDGNGDAD
48 48 A G S S- 0 0 30 39 32 GGGGGGGGGGGGGGGGGGDGGGDGGN.GGGDDGKGKHGG
49 49 A Q > - 0 0 119 39 50 QQQQQQQQQQLQQQQQQQQLQLKQQQ.HQQRRQVQVQVS
50 50 A V T 3 + 0 0 94 39 83 VVVVVVVKVKKKKKEEKRRKREPEER.EQPKKQTETSTT
51 51 A M T 3 + 0 0 148 39 85 MMMMMMVVDDDAAAAAAVSSSSLDDS.SIMIIIQQQSQI
52 52 A D S < S- 0 0 80 39 78 DDDKKKDDNPTTTEEDETEEEEFRRE.KSDYYSGTGDKT
53 53 A V S S+ 0 0 126 39 80 VVVVVVVESNNNNNNNNDNENEKNNN.ETSEETVAVSGQ
54 54 A D + 0 0 8 39 90 DDDNNNNQAMKIILLLVMLLLLTLLL.LGGTTGKGKNKG
55 55 A L E -D 74 0A 88 39 82 LLLSSSWFSFLFFFFFFFSYFYAFFF.YVFHHVDVDKNV
56 56 A S E +D 73 0A 14 39 79 SSSPPPTPQStPPppppSpapasSSP.AEVAAEFVFsFE
57 57 A T E -D 72 0A 76 38 81 TTTTTTVQYIvYYtttiYtstsiYYT.QT.QQTPSPtPT
58 58 A A E -D 71 0A 19 39 64 AAAPPPSHTTATTATTSTDGEGATTT.PTTNNTETETET
59 59 A S E -D 70 0A 38 39 77 SSSPPPAGAAPAAPRRPAPPPPPAAD.GRSVVRVEVSMK
60 60 A T E +D 69 0A 85 39 64 TTAAAAPLPQPPPPPPHPPEPEPPPP.PPPLLPTLTPMP
61 61 A T E -D 68 0A 59 39 85 TTTTTTRVAPKGGKKKKGRIRITDDP.ESTIISMMMMAS
62 62 A Q E +D 67 0A 180 39 68 QQQQQQLKKREKTRRRQTQQQQQQQR.IKCKKKSQSKRK
63 63 A E E > -D 66 0A 102 39 45 EEEEEEEQVQEQKEEEEQEEEEELLQ.QQEEEQDNDENQ
64 64 A G T 3 S- 0 0 82 39 42 GGGGGGGEEEGEEGGGGEGGGGGEEE.ESvEESGGGgGS
65 65 A E T 3 S+ 0 0 146 38 66 EEEEEEKgggKggnggKgANANKggg.gdgggdLNLd.n
66 66 A L E < S- D 0 63A 52 37 58 LLLLLLLlllLvvsttLvLLLLLlll.lkNllk.W.tLk
67 67 A A E - D 0 62A 0 36 69 AAAAAAAAAAATTFFFATATATAAAA.TYFAAY...YYY
68 68 A S E - D 0 61A 24 38 47 SSSSSSSSSSSSSSSSSSSSSSSSSS.TMSSSMH.HFTA
69 69 A T E -CD 32 60A 0 39 49 TTTTTTRTITTTTSLLATTTTTTTTT.TAATTATTTLQA
70 70 A Q E -CD 31 59A 91 39 88 QQQQQQQHQHHHHHQQHHSYSYHYYS.YSTYYSRFRYTS
71 71 A S E - D 0 58A 0 39 6 SSSSSSSSSSSSSSSSSSSSSSSSSS.SSSSSSSQSSSS
72 72 A E E - D 0 57A 88 39 73 EEEEEEEEEEEEEEEEQEREREKEER.EYRRRYSISKMY
73 73 A L E - D 0 56A 7 40 20 LLLFFFLLFLLLLVVLLLLVLVIVVLLVLLLLLLLLMLL
74 74 A T E +BD 27 55A 59 40 65 TTTTTTINNNNNNNNNNNNNNNNNNNNNSTNNSLVLTTS
75 75 A L E -B 26 0A 5 40 25 LLLLLLLIIIIIIIIIIIIIIIVIIIIILVIILIMIVIL
76 76 A S E >> -B 25 0A 38 40 68 SSSAAATTSTTTTTTTTTSTSTTTTSTTDPTTDLLLDLS
77 77 A Q H 3> S+ 0 0 62 40 43 QQQQQQQQLQQQQQQQQQQQQQQQQQQQAAQQAPEPKAP
78 78 A K H 3> S+ 0 0 163 40 66 KKKKKKKGDGGGGDGSGGGGGGEGGGEGSGQQSDMDASD
79 79 A H H <4 S+ 0 0 24 40 58 HHRHHQRQEEQEEQQQQEEQEQDQQEEQKEQQKRTRNDK
80 80 A W H >< S+ 0 0 42 40 19 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWSPSWWW
81 81 A L H 3< S+ 0 0 126 40 76 LLLLLLLAVAVVVLMTVVVVVVMAAVLVTFMMTRRRNKK
82 82 A S T 3< S- 0 0 70 40 26 SSLSSTSSSSSSSSSSSSSSSSSSSSSSSSSSSQSQNSS
83 83 A D < + 0 0 57 40 61 DDDDDDDEEKEQQGSSQQLEQEEQQQQESNEEHGGGGDH
84 84 A R E - F 0 103B 17 39 74 RRRRRRHNRRSKKKNKSKRKKKSIIRKKDTSSEDDDA.S
85 85 A T E +EF 47 102B 45 40 22 TTTTTNTTTTTTTTTTTTTTTTITTTTTTVTTTTSTTTS
86 86 A Y E +EF 46 101B 4 40 1 YYYYYYYYYYFYYFYYYYYYYYFYYYYYYYFFYYYYYYF
87 87 A T E -EF 45 100B 20 40 29 TTTTTTTTTTTTTTTTTTATTTTTTATTTTTTTQTQTQS
88 88 A a E -EF 44 99B 0 40 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
89 89 A Q E -EF 43 98B 57 40 55 QQQQQQLQQRRQQQHHRRQRQRQQQQQRQQKKQDQDMSL
90 90 A V E -EF 42 97B 0 40 4 VVVVVVVVVVVVVVVVVVVVAVVVVVVVVVVVVVVVVVV
91 91 A T E -EF 41 96B 40 39 52 TTTTTTDTTAATTTKTNSSNSNTSSSTNTATTTT TITT
92 92 A Y E > - F 0 95B 18 39 62 YYYYYYYYYYYYYHHHYYLYLYTYYLYYHHSSHH HHHH
93 93 A Q T 3 S- 0 0 128 38 68 QQQQQQQKRQRQQ NNLQHYHYHYYHNYDQQQDQ QEDE
94 94 A G T 3 S+ 0 0 69 38 10 GGGGGGGDGGGGG GGGGGGGGGGGGGGGEGGGG GAGG
95 95 A H E < -F 92 0B 106 37 96 HDDTTTEMHELFF SSFFCYCYFFFCFFKVEEKT TL S
96 96 A T E +F 91 0B 64 37 63 TTTTTTTIILTTT IIIHTNTNSIITTNTTNNTA AT T
97 97 A F E -F 90 0B 90 33 35 FFFYYYLFFFLFF FYIFVFVFYYYVYFL YYL V
98 98 A E E +F 89 0B 55 33 55 EEENNNEKEEEEK EEEEKEKEREEKEDE WWE E
99 99 A D E +F 88 0B 56 32 63 DDDDDDEDDASDD DDDDASASAKKADNR AAR
100 100 A S E -F 87 0B 19 32 69 SSSSSSSQSHSHE SSHHQHQHHHHQHHS HHS
101 101 A T E -F 86 0B 31 32 49 TTTTTTAATAAAA AAAAAAAAAAAAAAL TTL
102 102 A K E +F 85 0B 146 32 56 KKKKKKKRRRRRR QQRLRHRHHLLRRRK RRK
103 103 A K E -F 84 0B 93 32 50 KKKKKKKKWEMKK KKSKTRTRKRRTKRR RRR
104 104 A S 0 0 104 32 11 CCCCCCCCCCCCC CCCCCCCCCCCCCCS CCS
105 105 A A 0 0 86 29 59 AA AAAATTTTTS SSPTPTPTTTTPTT SS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 27 5 45 23 0 0 0 0 0 0 0 0 22 0 0 1.190 39 0.43
2 2 A 4 0 0 13 0 0 0 0 0 0 4 17 0 0 38 25 0 0 0 0 24 0 0 1.538 51 0.28
3 3 A 0 0 0 0 0 0 0 0 0 0 4 4 0 4 0 0 0 0 63 26 27 0 0 1.007 33 0.63
4 4 A 21 0 3 0 69 0 3 0 0 3 0 0 0 0 0 0 0 0 0 0 29 0 0 0.931 31 0.57
5 5 A 0 0 17 0 0 0 0 0 3 3 17 57 0 0 0 0 0 3 0 0 30 0 0 1.259 42 0.44
6 6 A 0 6 0 0 0 0 0 3 3 52 0 3 0 0 0 0 13 3 0 16 31 0 0 1.520 50 0.35
7 7 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
8 8 A 3 0 0 0 0 0 0 0 3 3 26 60 0 0 3 0 0 0 0 3 35 0 0 1.164 38 0.47
9 9 A 89 6 0 0 0 0 0 0 0 3 0 3 0 0 0 0 0 0 0 0 35 0 0 0.474 15 0.82
10 10 A 3 0 0 0 3 0 3 0 0 0 0 6 0 0 20 63 0 0 3 0 35 0 0 1.184 39 0.45
11 11 A 3 63 26 0 6 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 35 0 0 1.008 33 0.68
12 12 A 0 41 0 0 49 0 8 0 0 0 0 0 0 0 0 3 0 0 0 0 37 0 0 1.018 33 0.75
13 13 A 8 0 0 0 0 0 14 0 3 5 0 3 0 43 3 0 22 0 0 0 37 0 0 1.618 54 0.22
14 14 A 0 0 0 0 0 0 0 0 0 14 81 3 0 0 0 0 3 0 0 0 37 1 0 0.636 21 0.68
15 15 A 0 0 0 0 0 0 0 0 0 3 86 0 8 3 0 0 0 0 0 0 36 0 0 0.535 17 0.76
16 16 A 0 0 0 0 0 0 0 0 0 3 11 3 84 0 0 0 0 0 0 0 37 0 0 0.584 19 0.76
17 17 A 0 0 0 0 0 0 0 0 0 0 5 8 0 0 0 3 0 5 16 62 37 0 0 1.207 40 0.54
18 18 A 0 0 0 0 0 0 0 14 0 54 8 0 0 0 0 0 5 11 0 8 37 1 0 1.409 47 0.39
19 19 A 3 11 0 0 0 0 0 19 0 0 17 8 0 6 11 0 0 6 8 11 36 0 0 2.184 72 0.13
20 20 A 0 3 3 0 0 0 0 78 3 0 8 0 0 0 0 0 0 5 0 0 37 1 0 0.845 28 0.64
21 21 A 0 0 0 0 0 0 0 6 0 0 6 3 0 22 3 0 6 0 6 50 36 0 0 1.522 50 0.40
22 22 A 0 3 0 0 19 0 0 0 19 0 11 42 0 0 0 0 0 0 3 3 36 0 0 1.544 51 0.21
23 23 A 0 0 0 0 0 0 0 5 3 27 3 3 3 38 3 3 14 0 0 0 37 0 0 1.735 57 0.29
24 24 A 0 0 0 0 0 0 3 0 16 30 14 24 0 0 5 0 0 0 5 3 37 0 0 1.781 59 0.26
25 25 A 3 0 0 0 3 0 0 0 0 0 5 71 0 0 0 8 0 0 0 11 38 0 0 1.027 34 0.46
26 26 A 13 0 68 0 0 0 0 0 10 0 0 8 0 0 3 0 0 0 0 0 40 1 0 1.042 34 0.53
27 27 A 0 0 0 0 0 0 0 0 0 0 8 10 0 10 0 0 69 3 0 0 39 0 0 1.013 33 0.48
28 28 A 5 93 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.314 10 0.94
29 29 A 10 65 5 0 0 0 8 0 5 0 0 3 0 0 5 0 0 0 0 0 40 0 0 1.246 41 0.47
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 40 0 0 0.000 0 1.00
31 31 A 0 75 0 0 8 0 5 0 0 0 5 0 0 0 8 0 0 0 0 0 40 0 0 0.904 30 0.60
32 32 A 38 5 57 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.836 27 0.82
33 33 A 0 0 3 0 0 0 5 5 0 0 65 20 0 0 3 0 0 0 0 0 40 0 0 1.086 36 0.45
34 34 A 0 0 0 0 0 0 0 73 0 0 10 0 0 0 0 0 0 0 0 17 40 0 0 0.768 25 0.73
35 35 A 0 0 0 0 32 0 63 0 0 0 0 0 0 5 0 0 0 0 0 0 40 0 0 0.809 26 0.87
36 36 A 8 5 5 0 3 0 10 0 0 0 13 55 0 3 0 0 0 0 0 0 40 0 0 1.497 49 0.26
37 37 A 0 0 0 0 0 0 0 0 0 95 0 0 0 0 0 0 5 0 0 0 40 0 0 0.199 6 0.91
38 38 A 0 0 0 0 0 0 0 75 8 0 8 0 0 0 0 0 0 5 5 0 40 0 0 0.904 30 0.68
39 39 A 0 0 0 0 0 0 0 5 13 5 13 10 0 0 3 15 0 0 0 38 40 0 0 1.794 59 0.30
40 40 A 28 13 47 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 1.228 41 0.71
41 41 A 0 0 0 3 0 0 0 0 0 0 8 5 0 3 0 25 10 20 25 3 40 1 0 1.866 62 0.32
42 42 A 72 0 28 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.595 19 0.88
43 43 A 3 0 5 0 0 0 0 0 3 0 3 67 0 5 0 10 3 0 0 3 39 0 0 1.278 42 0.44
44 44 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
45 45 A 0 82 0 3 0 0 0 0 0 0 0 0 0 0 0 8 0 0 8 0 39 0 0 0.651 21 0.57
46 46 A 46 0 3 5 0 0 0 0 8 0 8 0 0 0 0 8 5 18 0 0 39 0 0 1.656 55 0.20
47 47 A 0 0 0 0 0 0 0 5 3 0 0 0 0 0 0 0 0 0 13 79 39 0 0 0.692 23 0.77
48 48 A 0 0 0 0 0 0 0 79 0 0 0 0 0 3 0 5 0 0 3 10 39 0 0 0.756 25 0.68
49 49 A 8 8 0 0 0 0 0 0 0 0 3 0 0 3 5 3 72 0 0 0 39 0 0 1.067 35 0.49
50 50 A 23 0 0 0 0 0 0 0 0 5 3 10 0 0 10 26 5 18 0 0 39 0 0 1.861 62 0.17
51 51 A 8 3 13 21 0 0 0 0 15 0 18 0 0 0 0 0 10 0 0 13 39 0 0 1.973 65 0.14
52 52 A 0 0 0 0 3 0 5 5 0 3 5 15 0 0 5 13 0 21 3 23 39 0 0 2.106 70 0.22
53 53 A 26 0 0 0 0 0 0 3 3 0 8 5 0 0 0 3 3 15 33 3 39 0 0 1.822 60 0.19
54 54 A 3 28 5 5 0 0 0 13 3 0 0 8 0 0 0 10 3 0 13 10 39 0 0 2.135 71 0.10
55 55 A 10 13 0 0 36 3 8 0 3 0 13 0 0 5 0 3 0 0 3 5 39 0 0 2.006 66 0.17
56 56 A 5 0 0 0 8 0 0 0 13 33 26 5 0 0 0 0 3 8 0 0 39 1 11 1.772 59 0.21
57 57 A 5 0 8 0 0 0 16 0 0 8 8 45 0 0 0 0 11 0 0 0 38 0 0 1.645 54 0.19
58 58 A 0 0 0 0 0 0 0 5 18 10 5 41 0 3 0 0 0 10 5 3 39 0 0 1.786 59 0.36
59 59 A 10 0 0 3 0 0 0 5 21 28 15 0 0 0 10 3 0 3 0 3 39 0 0 1.965 65 0.23
60 60 A 0 10 0 3 0 0 0 0 10 54 0 13 0 3 0 0 3 5 0 0 39 0 0 1.498 50 0.35
61 61 A 3 0 10 10 0 0 0 8 5 5 8 23 0 0 8 13 0 3 0 5 39 0 0 2.306 76 0.14
62 62 A 0 3 3 0 0 0 0 0 0 0 5 5 3 0 15 23 41 3 0 0 39 0 0 1.672 55 0.32
63 63 A 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 3 23 56 5 5 39 0 0 1.306 43 0.54
64 64 A 3 0 0 0 0 0 0 59 0 0 8 0 0 0 0 0 0 31 0 0 39 1 2 0.965 32 0.57
65 65 A 0 5 0 0 0 0 0 39 5 0 0 0 0 0 0 11 0 18 13 8 38 2 19 1.693 56 0.33
66 66 A 8 68 0 0 0 3 0 0 0 0 3 8 0 0 0 8 0 0 3 0 37 1 0 1.169 39 0.42
67 67 A 0 0 0 0 11 0 14 0 58 0 0 17 0 0 0 0 0 0 0 0 36 0 0 1.131 37 0.30
68 68 A 0 0 0 5 3 0 0 0 3 0 79 5 0 5 0 0 0 0 0 0 38 0 0 0.843 28 0.52
69 69 A 0 8 3 0 0 0 0 0 13 0 3 69 0 0 3 0 3 0 0 0 39 0 0 1.091 36 0.50
70 70 A 0 0 0 0 3 0 21 0 0 0 15 5 0 23 5 0 28 0 0 0 39 0 0 1.707 56 0.12
71 71 A 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 0 3 0 0 0 39 0 0 0.119 3 0.93
72 72 A 0 0 3 3 0 0 8 0 0 0 5 0 0 0 15 5 3 59 0 0 39 0 0 1.383 46 0.27
73 73 A 17 68 3 3 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.985 32 0.79
74 74 A 3 5 3 0 0 0 0 0 0 0 8 25 0 0 0 0 0 0 57 0 40 0 0 1.193 39 0.34
75 75 A 8 28 63 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.935 31 0.74
76 76 A 0 10 0 0 0 0 0 0 8 3 22 50 0 0 0 0 0 0 0 8 40 0 0 1.393 46 0.31
77 77 A 0 3 0 0 0 0 0 0 10 8 0 0 0 0 0 3 75 3 0 0 40 0 0 0.917 30 0.57
78 78 A 0 0 0 3 0 0 0 43 3 0 10 0 0 0 0 20 5 5 0 13 40 0 0 1.660 55 0.33
79 79 A 0 0 0 0 0 0 0 0 0 0 0 3 0 13 10 8 35 25 3 5 40 0 0 1.733 57 0.41
80 80 A 0 0 0 0 0 93 0 0 0 3 5 0 0 0 0 0 0 0 0 0 40 0 0 0.314 10 0.81
81 81 A 30 25 0 10 3 0 0 0 10 0 0 8 0 0 8 5 0 0 3 0 40 0 0 1.891 63 0.23
82 82 A 0 3 0 0 0 0 0 0 0 0 88 3 0 0 0 0 5 0 3 0 40 0 0 0.543 18 0.73
83 83 A 0 3 0 0 0 0 0 13 0 0 8 0 0 5 0 3 22 22 3 22 40 1 0 1.888 63 0.39
84 84 A 0 0 5 0 0 0 0 0 3 0 15 3 0 3 28 26 0 3 5 10 39 0 0 1.908 63 0.25
85 85 A 3 0 3 0 0 0 0 0 0 0 5 88 0 0 0 0 0 0 3 0 40 0 0 0.543 18 0.78
86 86 A 0 0 0 0 15 0 85 0 0 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.423 14 0.98
87 87 A 0 0 0 0 0 0 0 0 5 0 3 85 0 0 0 0 8 0 0 0 40 0 0 0.574 19 0.70
88 88 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 40 0 0 0.000 0 1.00
89 89 A 0 5 0 3 0 0 0 0 0 0 3 0 0 5 17 5 57 0 0 5 40 0 0 1.407 46 0.45
90 90 A 98 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 40 0 0 0.117 3 0.96
91 91 A 0 0 3 0 0 0 0 0 8 0 15 59 0 0 0 3 0 0 10 3 39 0 0 1.312 43 0.47
92 92 A 0 8 0 0 0 0 56 0 0 0 5 3 0 28 0 0 0 0 0 0 39 0 0 1.124 37 0.38
93 93 A 0 3 0 0 0 0 13 0 0 0 0 0 0 11 5 3 45 5 8 8 38 0 0 1.766 58 0.32
94 94 A 0 0 0 0 0 0 0 92 3 0 0 0 0 0 0 0 0 3 0 3 38 0 0 0.363 12 0.90
95 95 A 3 5 0 3 24 0 5 0 0 0 8 14 8 8 0 5 0 11 0 5 37 0 0 2.292 76 0.03
96 96 A 0 3 19 0 0 0 0 0 5 0 3 54 0 3 0 0 0 0 14 0 37 0 0 1.368 45 0.37
97 97 A 12 12 3 0 42 0 30 0 0 0 0 0 0 0 0 0 0 0 0 0 33 0 0 1.343 44 0.64
98 98 A 0 0 0 0 0 6 0 0 0 0 0 0 0 0 3 15 0 64 9 3 33 0 0 1.173 39 0.45
99 99 A 0 0 0 0 0 0 0 0 22 0 9 0 0 0 6 6 0 3 3 50 32 0 0 1.464 48 0.37
100 100 A 0 0 0 0 0 0 0 0 0 0 44 0 0 41 0 0 13 3 0 0 32 0 0 1.096 36 0.30
101 101 A 0 6 0 0 0 0 0 0 63 0 0 31 0 0 0 0 0 0 0 0 32 0 0 0.831 27 0.50
102 102 A 0 9 0 0 0 0 0 0 0 0 0 0 0 9 44 31 6 0 0 0 32 0 0 1.342 44 0.43
103 103 A 0 0 0 3 0 3 0 0 0 0 3 9 0 0 28 50 0 3 0 0 32 0 0 1.358 45 0.50
104 104 A 0 0 0 0 0 0 0 0 0 0 9 0 91 0 0 0 0 0 0 0 32 0 0 0.311 10 0.88
105 105 A 0 0 0 0 0 0 0 0 24 14 17 45 0 0 0 0 0 0 0 0 29 0 0 1.279 42 0.41
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
8 63 166 1 gKl
9 66 166 1 gKl
10 66 167 1 gKl
11 55 152 1 tYv
12 66 168 1 gKv
13 64 167 1 gNv
14 57 160 1 pYt
14 66 170 1 nRs
15 54 149 1 pYt
15 63 159 1 gQt
16 57 160 1 pYt
16 66 170 1 gSt
17 57 191 1 pYi
18 66 150 1 gNv
19 55 166 1 pTt
20 57 156 1 aRs
21 57 162 1 pTt
22 57 164 1 aRs
23 56 157 1 sSi
24 66 163 1 gKl
25 66 164 1 gKl
26 66 171 1 gAl
28 66 110 1 gNl
29 42 92 1 dNk
30 58 164 1 vNg
31 41 161 1 gKl
32 41 160 1 gKl
33 59 88 1 dNk
37 52 273 1 sVt
37 60 282 2 gDGd
37 61 285 1 dSt
39 58 68 1 nNk
//