Complet list of 1g4d hssp file
Complete list of 1g4d.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1G4D
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER VIRAL PROTEIN/DNA 26-OCT-00 1G4D
COMPND MOL_ID: 1; MOLECULE: REPRESSOR PROTEIN C; CHAIN: A; FRAGMENT: N-TERMIN
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE MU; ORGANISM_TAXI
AUTHOR J.M.WOJCIAK,J.IWAHARA,R.T.CLUBB
DBREF 1G4D A 13 81 UNP P06019 RPC1_BPMU 1 59
DBREF 1G4D B 102 117 PDB 1G4D 1G4D 102 117
DBREF 1G4D C 120 135 PDB 1G4D 1G4D 120 135
SEQLENGTH 69
NCHAIN 1 chain(s) in 1G4D data set
NALIGN 44
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : E0J3P8_ECOLW 1.00 1.00 1 69 13 81 69 0 0 196 E0J3P8 C-repressor OS=Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) GN=c PE=4 SV=1
2 : E8YAV7_ECOKO 1.00 1.00 1 69 13 81 69 0 0 196 E8YAV7 MuA-transposase/repressor protein CI DNA-binding protein OS=Escherichia coli (strain ATCC 55124 / KO11) GN=EKO11_3602 PE=4 SV=1
3 : H5LPB5_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 H5LPB5 Mu DNA-binding domain protein OS=Escherichia coli DEC13C GN=ECDEC13C_2809 PE=4 SV=1
4 : H5M3I6_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 H5M3I6 Mu DNA-binding domain protein OS=Escherichia coli DEC13D GN=ECDEC13D_2649 PE=4 SV=1
5 : H5MHT8_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 H5MHT8 Mu DNA-binding domain protein OS=Escherichia coli DEC13E GN=ECDEC13E_2648 PE=4 SV=1
6 : H5P3I5_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 H5P3I5 Mu DNA-binding domain protein OS=Escherichia coli DEC14D GN=ECDEC14D_1506 PE=4 SV=1
7 : M9A5Z1_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 M9A5Z1 Repressor protein CI OS=Escherichia coli 2780750 GN=EC2780750_4860 PE=4 SV=1
8 : M9AJN3_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 M9AJN3 Repressor protein CI OS=Escherichia coli 2788150 GN=EC2788150_2182 PE=4 SV=1
9 : N3AQS4_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3AQS4 Repressor protein CI OS=Escherichia coli P0299917.10 GN=ECP029991710_4263 PE=4 SV=1
10 : N3C0K9_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3C0K9 Repressor protein CI OS=Escherichia coli P0299917.4 GN=ECP02999174_4400 PE=4 SV=1
11 : N3CRY7_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3CRY7 Repressor protein CI OS=Escherichia coli P0299917.5 GN=ECP02999175_4297 PE=4 SV=1
12 : N3DCG1_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3DCG1 Repressor protein CI OS=Escherichia coli P0299917.8 GN=ECP02999178_4314 PE=4 SV=1
13 : N3DHF9_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3DHF9 Repressor protein CI OS=Escherichia coli P0299917.6 GN=ECP02999176_4294 PE=4 SV=1
14 : N3DQA7_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3DQA7 Repressor protein CI OS=Escherichia coli P0299917.7 GN=ECP02999177_4282 PE=4 SV=1
15 : N3EKD6_ECOLX 1.00 1.00 11 69 1 59 59 0 0 174 N3EKD6 Repressor protein CI OS=Escherichia coli P0299917.9 GN=ECP02999179_4363 PE=4 SV=1
16 : T2G575_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 T2G575 Repressor OS=Escherichia coli LY180 GN=LY180_01585 PE=4 SV=1
17 : T8QGV1_ECOLX 1.00 1.00 1 69 13 81 69 0 0 196 T8QGV1 Repressor protein CI OS=Escherichia coli UMEA 3108-1 GN=G908_01100 PE=4 SV=1
18 : C5A0X1_ECOBW 0.99 1.00 1 69 13 81 69 0 0 196 C5A0X1 Repressor protein CI OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=BWG_3689 PE=4 SV=1
19 : E8Y3Y3_ECOKO 0.99 1.00 1 69 13 81 69 0 0 196 E8Y3Y3 MuA-transposase/repressor protein CI DNA-binding protein OS=Escherichia coli (strain ATCC 55124 / KO11) GN=EKO11_4158 PE=4 SV=1
20 : RPC1_BPMU 1QPM 0.98 1.00 11 69 1 59 59 0 0 174 P06019 Repressor protein CI OS=Enterobacteria phage Mu GN=CI PE=1 SV=1
21 : C4SLG2_YERFR 0.44 0.73 1 55 2 55 55 1 1 115 C4SLG2 MuA-transposase/repressor protein CI DNA-binding OS=Yersinia frederiksenii ATCC 33641 GN=yfred0001_20960 PE=4 SV=1
22 : C5A0X2_ECOBW 0.42 0.64 3 66 3 66 64 0 0 419 C5A0X2 Transposase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=BWG_3690 PE=4 SV=1
23 : E0J3Q0_ECOLW 0.42 0.64 3 66 3 66 64 0 0 663 E0J3Q0 Mu transposase OS=Escherichia coli (strain ATCC 9637 / CCM 2024 / DSM 1116 / NCIMB 8666 / NRRL B-766 / W) GN=gpA PE=4 SV=1
24 : E8Y3Y1_ECOKO 0.42 0.64 3 66 3 66 64 0 0 282 E8Y3Y1 MuA-transposase/repressor protein CI DNA-binding protein OS=Escherichia coli (strain ATCC 55124 / KO11) GN=EKO11_4156 PE=4 SV=1
25 : E8YAV9_ECOKO 0.42 0.64 3 66 3 66 64 0 0 663 E8YAV9 Mu transposase OS=Escherichia coli (strain ATCC 55124 / KO11) GN=EKO11_3604 PE=4 SV=1
26 : H5LPB4_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 H5LPB4 Transposase OS=Escherichia coli DEC13C GN=ECDEC13C_2808 PE=4 SV=1
27 : H5M3I5_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 H5M3I5 Transposase OS=Escherichia coli DEC13D GN=ECDEC13D_2648 PE=4 SV=1
28 : H5MHT7_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 H5MHT7 Transposase OS=Escherichia coli DEC13E GN=ECDEC13E_2647 PE=4 SV=1
29 : H5P3I6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 H5P3I6 Transposase OS=Escherichia coli DEC14D GN=ECDEC14D_1507 PE=4 SV=1
30 : M8ZSJ0_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 M8ZSJ0 Transposase OS=Escherichia coli 2788150 GN=EC2788150_2183 PE=4 SV=1
31 : M9A1B6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 M9A1B6 Transposase OS=Escherichia coli 2780750 GN=EC2780750_4859 PE=4 SV=1
32 : N3AQH5_ECOLX 0.42 0.64 3 66 3 66 64 0 0 271 N3AQH5 Mu DNA-binding domain protein (Fragment) OS=Escherichia coli P0299917.10 GN=ECP029991710_4262 PE=4 SV=1
33 : N3BCD5_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 N3BCD5 Transposase OS=Escherichia coli P0299917.2 GN=ECP02999172_4344 PE=4 SV=1
34 : N3CCG6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 N3CCG6 Transposase OS=Escherichia coli P0299917.4 GN=ECP02999174_4399 PE=4 SV=1
35 : N3CPQ6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 N3CPQ6 Transposase OS=Escherichia coli P0299917.5 GN=ECP02999175_4296 PE=4 SV=1
36 : N3D4E5_ECOLX 0.42 0.64 3 66 3 66 64 0 0 271 N3D4E5 Mu DNA-binding domain protein (Fragment) OS=Escherichia coli P0299917.6 GN=ECP02999176_4293 PE=4 SV=1
37 : N3DJB4_ECOLX 0.42 0.64 3 66 3 66 64 0 0 216 N3DJB4 Mu DNA-binding domain protein (Fragment) OS=Escherichia coli P0299917.8 GN=ECP02999178_4313 PE=4 SV=1
38 : N3E5B6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 268 N3E5B6 Mu DNA-binding domain protein (Fragment) OS=Escherichia coli P0299917.7 GN=ECP02999177_4281 PE=4 SV=1
39 : N3EJ41_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 N3EJ41 Transposase OS=Escherichia coli P0299917.9 GN=ECP02999179_4362 PE=4 SV=1
40 : T2G6B6_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 T2G6B6 Transposase OS=Escherichia coli LY180 GN=LY180_01575 PE=4 SV=1
41 : T8QKQ9_ECOLX 0.42 0.64 3 66 3 66 64 0 0 163 T8QKQ9 Transposase (Fragment) OS=Escherichia coli UMEA 3108-1 GN=G908_01098 PE=4 SV=1
42 : TRA_BPMU 1TNS 0.42 0.64 3 66 3 66 64 0 0 663 P07636 Transposase OS=Enterobacteria phage Mu GN=A PE=1 SV=2
43 : W1D020_ECOLX 0.42 0.64 3 66 3 66 64 0 0 663 W1D020 DNA transposition protein OS=Escherichia coli IS35 PE=4 SV=1
44 : E3Y1S2_SHIFL 0.36 0.67 4 61 10 65 58 2 2 169 E3Y1S2 Mu DNA-binding domain protein OS=Shigella flexneri 2a str. 2457T GN=SF2457T_1947 PE=4 SV=1
## ALIGNMENTS 1 - 44
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 13 A K 0 0 243 12 0 KKKKKK KKKK K
2 14 A S - 0 0 32 12 83 SSSSSS SSSS K
3 15 A I - 0 0 43 34 54 IIIIII IIII ELLLLLLLLLLLLLLLLLLLLLL
4 16 A W - 0 0 51 35 0 WWWWWW WWWW WWWWWWWWWWWWWWWWWWWWWWWW
5 17 A C B -A 48 0A 9 35 87 CCCCCC CCCC FVVVVVVVVVVVVVVVVVVVVVVM
6 18 A S >> - 0 0 40 35 16 SSSSSS SSSS ASSSSSSSSSSSSSSSSSSSSSST
7 19 A P H 3> S+ 0 0 12 35 6 PPPPPP PPPP APPPPPPPPPPPPPPPPPPPPPPP
8 20 A Q H 3> S+ 0 0 112 35 62 QQQQQQ QQQQ KKKKKKKKKKKKKKKKKKKKKKKK
9 21 A E H <4 S+ 0 0 86 35 6 EEEEEE EEEE EEEEEEEEEEEEEEEEEEEEEEEQ
10 22 A I H >< S+ 0 0 0 35 85 IIIIII IIII LCCCCCCCCCCCCCCCCCCCCCCI
11 23 A M H 3< S+ 0 0 38 45 95 MMMMMMMMMMMMMMMMMMMMAAAAAAAAAAAAAAAAAAAAAAAT
12 24 A A T 3< S+ 0 0 44 45 83 AAAAAAAAAAAAAAAAAAAAGNNNNNNNNNNNNNNNNNNNNNNE
13 25 A A S X S- 0 0 4 45 97 AAAAAAAAAAAAAAAAAAAALLLLLLLLLLLLLLLLLLLLLLLL
14 26 A D T 3 S+ 0 0 124 45 85 DDDDDDDDDDDDDDDDDDDDDPPPPPPPPPPPPPPPPPPPPPPD
15 27 A G T 3 S+ 0 0 48 45 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
16 28 A M S < S- 0 0 15 45 12 MMMMMMMMMMMMMMMMMMMMLLLLLLLLLLLLLLLLLLLLLLLM
17 29 A P - 0 0 66 45 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
18 30 A G S S+ 0 0 43 45 99 GGGGGGGGGGGGGGGGGGGGSKKKKKKKKKKKKKKKKKKKKKKG
19 31 A S S > S- 0 0 55 45 73 SSSSSSSSSSSSSSSSSSSSSTTTTTTTTTTTTTTTTTTTTTTT
20 32 A V H > S+ 0 0 68 45 101 VVVVVVVVVVVVVVVVVVVVPSSSSSSSSSSSSSSSSSSSSSSI
21 33 A A H > S+ 0 0 70 45 13 AAAAAAAAAAAAAAAAAAAAQAAAAAAAAAAAAAAAAAAAAAAQ
22 34 A G H > S+ 0 0 12 45 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
23 35 A V H X S+ 0 0 0 45 0 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
24 36 A H H X S+ 0 0 70 45 112 HHHHHHHHHHHHHHHHHHHHNIIIIIIIIIIIIIIIIIIIIIIH
25 37 A Y H X S+ 0 0 162 45 17 YYYYYYYYYYYYYYYYYYYYLYYYYYYYYYYYYYYYYYYYYYYK
26 38 A R H X>S+ 0 0 59 45 111 RRRRRRRRRRRRRRRRRRRRMVVVVVVVVVVVVVVVVVVVVVVR
27 39 A A I X>S+ 0 0 4 45 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
28 40 A N I <5S+ 0 0 112 45 67 NNNNNNNNNNNNNNNNNNNNKKKKKKKKKKKKKKKKKKKKKKKK
29 41 A V I <5S+ 0 0 104 45 105 VVVVVVVVVVVVVVVVVVVVRKKKKKKKKKKKKKKKKKKKKKKK
30 42 A Q I <5S- 0 0 83 45 8 QQQQQQQQQQQQQQQQQQQQEQQQQQQQQQQQQQQQQQQQQQQE
31 43 A G I << - 0 0 54 45 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
32 44 A W < - 0 0 16 45 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
33 45 A T - 0 0 74 45 101 TTTTTTTTTTTTTTTTTTTTEQQQQQQQQQQQQQQQQQQQQQQP
34 46 A K E -B 48 0A 130 45 70 KKKKKKKKKKKKKKKKKKKKQNNNNNNNNNNNNNNNNNNNNNNK
35 47 A R E -B 47 0A 132 44 10 RRRRRRRRRRRRRRRRRQQQRRRRRRRRRRRRRRRRRRRRRRR.
36 48 A K E -B 46 0A 137 45 84 KKKKKKKKKKKKKKKKKKKKRTTTTTTTTTTTTTTTTTTTTTTR
37 49 A K - 0 0 47 45 48 KKKKKKKKKKKKKKKKKKKKRRRRRRRRRRRRRRRRRRRRRRRS
38 50 A E + 0 0 143 45 81 EEEEEEEEEEEEEEEEEEEERAAAAAAAAAAAAAAAAAAAAAAQ
39 51 A G S S+ 0 0 90 45 5 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGE
40 52 A V S > S- 0 0 67 45 7 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVG
41 53 A K T 3> S+ 0 0 190 44 4 KKKKKKKKKKKKKKKKKKKK.KKKKKKKKKKKKKKKKKKKKKKR
42 54 A G T 34 S- 0 0 73 45 16 GGGGGGGGGGGGGGGGGGGGQGGGGGGGGGGGGGGGGGGGGGGR
43 55 A G T <4 S+ 0 0 40 45 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
44 56 A K T 4 + 0 0 181 45 8 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKP
45 57 A A < + 0 0 26 45 4 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAG
46 58 A V E - B 0 36A 26 45 24 VVVVVVVVVVVVVVVVVVVVVIIIIIIIIIIIIIIIIIIIIIIV
47 59 A E E - B 0 35A 47 45 0 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
48 60 A Y E -AB 5 34A 16 45 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
49 61 A D >> - 0 0 19 44 54 DDDDDDDDDDDDDDDDDDDDHNNNNNNNNNNNNNNNNNNNNNN.
50 62 A V G >4 S+ 0 0 0 45 82 VVVVVVVVVVVVVVVVVVVVIAAAAAAAAAAAAAAAAAAAAAAI
51 63 A M G 34 S+ 0 0 73 45 116 MMMMMMMMMMMMMMMMMMMMENNNNNNNNNNNNNNNNNNNNNNP
52 64 A S G <4 S+ 0 0 41 45 6 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSA
53 65 A M S << S- 0 0 4 45 16 MMMMMMMMMMMMMMMMMMMMLLLLLLLLLLLLLLLLLLLLLLLI
54 66 A P > - 0 0 41 45 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
55 67 A T H > S+ 0 0 95 45 82 TTTTTTTTTTTTTTTTTTTTTVVVVVVVVVVVVVVVVVVVVVVA
56 68 A K H > S+ 0 0 180 44 81 KKKKKKKKKKKKKKKKKKKK EEEEEEEEEEEEEEEEEEEEEEM
57 69 A E H > S+ 0 0 10 44 78 EEEEEEEEEEEEEEEEEEEE AAAAAAAAAAAAAAAAAAAAAAQ
58 70 A R H X S+ 0 0 78 44 44 RRRRRRRRRRRRRRRRRRRR KKKKKKKKKKKKKKKKKKKKKKK
59 71 A E H X S+ 0 0 111 44 82 EEEEEEEEEEEEEEEEEEEE AAAAAAAAAAAAAAAAAAAAAAI
60 72 A Q H X S+ 0 0 71 44 82 QQQQQQQQQQQQQQQQQQQQ AAAAAAAAAAAAAAAAAAAAAAA
61 73 A V H X S+ 0 0 0 44 45 VVVVVVVVVVVVVVVVVVVV LLLLLLLLLLLLLLLLLLLLLLI
62 74 A I H X>S+ 0 0 23 43 46 IIIIIIIIIIIIIIIIIIII LLLLLLLLLLLLLLLLLLLLLL
63 75 A A H <5S+ 0 0 69 43 106 AAAAAAAAAAAAAAAAAAAA LLLLLLLLLLLLLLLLLLLLLL
64 76 A H H <5S+ 0 0 83 43 66 HHHHHHHHHHHHHHHHHHHH RRRRRRRRRRRRRRRRRRRRRR
65 77 A L H <5S- 0 0 51 43 106 LLLLLLLLLLLLLLLLLLLL QQQQQQQQQQQQQQQQQQQQQQ
66 78 A G T <5 + 0 0 60 43 0 GGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGG
67 79 A L < + 0 0 81 21 0 LLLLLLLLLLLLLLLLLLLL
68 80 A S 0 0 88 21 0 SSSSSSSSSSSSSSSSSSSS
69 81 A T 0 0 196 21 0 TTTTTTTTTTTTTTTTTTTT
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 13 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 12 0 0 0.000 0 1.00
2 14 A 0 0 0 0 0 0 0 0 0 0 92 0 0 0 0 8 0 0 0 0 12 0 0 0.287 9 0.17
3 15 A 0 65 32 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 0 34 0 0 0.750 25 0.46
4 16 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
5 17 A 63 0 0 3 3 0 0 0 0 0 0 0 31 0 0 0 0 0 0 0 35 0 0 0.859 28 0.13
6 18 A 0 0 0 0 0 0 0 0 3 0 94 3 0 0 0 0 0 0 0 0 35 0 0 0.259 8 0.83
7 19 A 0 0 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.93
8 20 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 69 31 0 0 0 35 0 0 0.622 20 0.37
9 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 97 0 0 35 0 0 0.130 4 0.94
10 22 A 0 3 34 0 0 0 0 0 0 0 0 0 63 0 0 0 0 0 0 0 35 0 0 0.760 25 0.14
11 23 A 0 0 0 47 0 0 0 0 51 0 0 2 0 0 0 0 0 0 0 0 45 0 0 0.783 26 0.05
12 24 A 0 0 0 0 0 0 0 2 47 0 0 0 0 0 0 0 0 2 49 0 45 0 0 0.875 29 0.16
13 25 A 0 53 0 0 0 0 0 0 47 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.691 23 0.02
14 26 A 0 0 0 0 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 51 45 0 0 0.693 23 0.14
15 27 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
16 28 A 0 51 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.693 23 0.88
17 29 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
18 30 A 0 0 0 0 0 0 0 49 0 0 2 0 0 0 0 49 0 0 0 0 45 0 0 0.784 26 0.00
19 31 A 0 0 0 0 0 0 0 0 0 0 49 51 0 0 0 0 0 0 0 0 45 0 0 0.693 23 0.27
20 32 A 47 0 2 0 0 0 0 0 0 2 49 0 0 0 0 0 0 0 0 0 45 0 0 0.875 29 -0.01
21 33 A 0 0 0 0 0 0 0 0 96 0 0 0 0 0 0 0 4 0 0 0 45 0 0 0.182 6 0.87
22 34 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
23 35 A 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
24 36 A 0 0 49 0 0 0 0 0 0 0 0 0 0 49 0 0 0 0 2 0 45 0 0 0.784 26 -0.13
25 37 A 0 2 0 0 0 0 96 0 0 0 0 0 0 0 0 2 0 0 0 0 45 0 0 0.213 7 0.82
26 38 A 49 0 0 2 0 0 0 0 0 0 0 0 0 0 49 0 0 0 0 0 45 0 0 0.784 26 -0.11
27 39 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
28 40 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 47 0 45 0 0 0.691 23 0.33
29 41 A 47 0 0 0 0 0 0 0 0 0 0 0 0 0 2 51 0 0 0 0 45 0 0 0.783 26 -0.06
30 42 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 4 0 0 45 0 0 0.182 6 0.92
31 43 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
32 44 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
33 45 A 0 0 0 0 0 0 0 0 0 2 0 47 0 0 0 0 49 2 0 0 45 0 0 0.875 29 -0.02
34 46 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 2 0 49 0 45 1 0 0.784 26 0.30
35 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 93 0 7 0 0 0 44 0 0 0.249 8 0.90
36 48 A 0 0 0 0 0 0 0 0 0 0 0 49 0 0 4 47 0 0 0 0 45 0 0 0.844 28 0.15
37 49 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 51 47 0 0 0 0 45 0 0 0.783 26 0.51
38 50 A 0 0 0 0 0 0 0 0 49 0 0 0 0 0 2 0 2 47 0 0 45 0 0 0.875 29 0.19
39 51 A 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 2 0 0 45 0 0 0.107 3 0.94
40 52 A 98 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 45 1 0 0.107 3 0.92
41 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 0 0 44 0 0 0.108 3 0.96
42 54 A 0 0 0 0 0 0 0 96 0 0 0 0 0 0 2 0 2 0 0 0 45 0 0 0.213 7 0.84
43 55 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
44 56 A 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 98 0 0 0 0 45 0 0 0.107 3 0.92
45 57 A 0 0 0 0 0 0 0 2 98 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.107 3 0.95
46 58 A 51 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.693 23 0.75
47 59 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 45 0 0 0.000 0 1.00
48 60 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 45 1 0 0.000 0 1.00
49 61 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 50 48 44 0 0 0.786 26 0.46
50 62 A 47 0 4 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.844 28 0.17
51 63 A 0 0 0 47 0 0 0 0 0 2 0 0 0 0 0 0 0 2 49 0 45 0 0 0.875 29 -0.16
52 64 A 0 0 0 0 0 0 0 0 2 0 98 0 0 0 0 0 0 0 0 0 45 0 0 0.107 3 0.94
53 65 A 0 51 2 47 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 0.783 26 0.84
54 66 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 45 0 0 0.000 0 1.00
55 67 A 49 0 0 0 0 0 0 0 2 0 0 49 0 0 0 0 0 0 0 0 45 0 0 0.784 26 0.17
56 68 A 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 48 0 50 0 0 44 0 0 0.786 26 0.18
57 69 A 0 0 0 0 0 0 0 0 50 0 0 0 0 0 0 0 2 48 0 0 44 0 0 0.786 26 0.21
58 70 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 52 0 0 0 0 44 0 0 0.692 23 0.56
59 71 A 0 0 2 0 0 0 0 0 50 0 0 0 0 0 0 0 0 48 0 0 44 0 0 0.786 26 0.18
60 72 A 0 0 0 0 0 0 0 0 52 0 0 0 0 0 0 0 48 0 0 0 44 0 0 0.692 23 0.18
61 73 A 48 50 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.786 26 0.54
62 74 A 0 51 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.693 23 0.53
63 75 A 0 51 0 0 0 0 0 0 49 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.693 23 -0.06
64 76 A 0 0 0 0 0 0 0 0 0 0 0 0 0 49 51 0 0 0 0 0 43 0 0 0.693 23 0.34
65 77 A 0 49 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0 43 0 0 0.693 23 -0.06
66 78 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
67 79 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
68 80 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
69 81 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 21 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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