Complet list of 1g26 hssp file
Complete list of 1g26.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1G26
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER CYTOKINE 17-OCT-00 1G26
COMPND MOL_ID: 1; MOLECULE: GRANULIN A; CHAIN: A; FRAGMENT: N-TERMINAL DOMAIN
SOURCE MOL_ID: 1; SYNTHETIC: YES; OTHER_DETAILS: THE PEPTIDE WAS CHEMICALLY S
AUTHOR D.TOLKATCHEV,A.NG,W.VRANKEN,F.NI
DBREF 1G26 A 1 31 UNP P28799 GRN_HUMAN 281 311
SEQLENGTH 31
NCHAIN 1 chain(s) in 1G26 data set
NALIGN 185
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : B4DJI2_HUMAN 0.90 0.90 2 31 219 248 30 0 0 530 B4DJI2 cDNA FLJ53342, highly similar to Granulins OS=Homo sapiens PE=2 SV=1
2 : F7FIK4_CALJA 0.90 0.90 2 31 277 306 30 0 0 587 F7FIK4 Uncharacterized protein OS=Callithrix jacchus GN=GRN PE=4 SV=1
3 : F7G9A4_CALJA 0.90 0.90 2 31 281 310 30 0 0 591 F7G9A4 Uncharacterized protein OS=Callithrix jacchus GN=GRN PE=4 SV=1
4 : F7GJW3_CALJA 0.90 0.90 2 31 279 308 30 0 0 589 F7GJW3 Uncharacterized protein OS=Callithrix jacchus GN=GRN PE=4 SV=1
5 : F7GJX0_CALJA 0.90 0.90 2 31 277 306 30 0 0 432 F7GJX0 Uncharacterized protein OS=Callithrix jacchus GN=GRN PE=4 SV=1
6 : F7GWA4_CALJA 0.90 0.90 2 31 97 126 30 0 0 407 F7GWA4 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=GRN PE=4 SV=1
7 : F7HAM9_MACMU 0.90 0.90 2 31 282 311 30 0 0 441 F7HAM9 Uncharacterized protein OS=Macaca mulatta GN=GRN PE=4 SV=1
8 : F7HAN1_MACMU 0.90 0.90 2 31 282 311 30 0 0 377 F7HAN1 Uncharacterized protein OS=Macaca mulatta GN=GRN PE=4 SV=1
9 : G1QZT5_NOMLE 0.90 0.90 2 31 282 311 30 0 0 593 G1QZT5 Uncharacterized protein OS=Nomascus leucogenys GN=GRN PE=4 SV=1
10 : G2HFG3_PANTR 0.90 0.90 2 31 282 311 30 0 0 593 G2HFG3 Granulin OS=Pan troglodytes GN=GRN PE=2 SV=1
11 : G3RIE1_GORGO 0.90 0.90 2 31 282 311 30 0 0 593 G3RIE1 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101135520 PE=4 SV=1
12 : G7NIX8_MACMU 0.90 0.90 2 31 282 311 30 0 0 593 G7NIX8 Granulins OS=Macaca mulatta GN=GRN PE=2 SV=1
13 : G7PUZ8_MACFA 0.90 0.90 2 31 282 311 30 0 0 593 G7PUZ8 Proepithelin OS=Macaca fascicularis GN=EGM_07991 PE=4 SV=1
14 : GRN_HUMAN 0.90 0.90 2 31 282 311 30 0 0 593 P28799 Granulins OS=Homo sapiens GN=GRN PE=1 SV=2
15 : H2NTU2_PONAB 0.90 0.90 2 31 282 311 30 0 0 578 H2NTU2 Uncharacterized protein OS=Pongo abelii GN=GRN PE=4 SV=1
16 : H2QD70_PANTR 0.90 0.90 2 31 190 219 30 0 0 501 H2QD70 Uncharacterized protein OS=Pan troglodytes GN=GRN PE=4 SV=1
17 : I3M3T1_SPETR 0.90 0.90 2 31 292 321 30 0 0 608 I3M3T1 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=GRN PE=4 SV=1
18 : K7EKL3_HUMAN 0.90 0.90 2 31 96 125 30 0 0 388 K7EKL3 Paragranulin (Fragment) OS=Homo sapiens GN=GRN PE=4 SV=1
19 : Q4R529_MACFA 0.90 0.90 2 31 282 311 30 0 0 593 Q4R529 Brain cDNA, clone: QccE-22055, similar to human granulin (GRN), OS=Macaca fascicularis PE=2 SV=1
20 : Q5R5T2_PONAB 0.90 0.90 2 31 282 311 30 0 0 593 Q5R5T2 Putative uncharacterized protein DKFZp459H066 OS=Pongo abelii GN=DKFZp459H066 PE=2 SV=1
21 : U3CZE1_CALJA 0.90 0.90 2 31 281 310 30 0 0 592 U3CZE1 Granulins OS=Callithrix jacchus GN=GRN PE=2 SV=1
22 : E2RHN1_CANFA 0.87 0.90 2 31 276 305 30 0 0 583 E2RHN1 Uncharacterized protein OS=Canis familiaris GN=GRN PE=4 SV=2
23 : G1MJ66_AILME 0.87 0.90 2 31 291 320 30 0 0 602 G1MJ66 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=GRN PE=4 SV=1
24 : G1T5N7_RABIT 0.87 0.90 2 31 294 323 30 0 0 606 G1T5N7 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=GRN PE=4 SV=1
25 : H0XCU3_OTOGA 0.87 0.90 2 31 295 324 30 0 0 600 H0XCU3 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=GRN PE=4 SV=1
26 : L8Y4N2_TUPCH 0.87 0.90 2 31 280 309 30 0 0 591 L8Y4N2 Uncharacterized protein OS=Tupaia chinensis GN=TREES_T100018260 PE=4 SV=1
27 : M3WNV1_FELCA 0.87 0.90 2 31 276 305 30 0 0 587 M3WNV1 Uncharacterized protein (Fragment) OS=Felis catus GN=GRN PE=4 SV=1
28 : M3YD29_MUSPF 0.87 0.90 2 31 297 326 30 0 0 608 M3YD29 Uncharacterized protein (Fragment) OS=Mustela putorius furo GN=GRN PE=4 SV=1
29 : U3KM88_RABIT 0.87 0.90 2 31 262 291 30 0 0 574 U3KM88 Uncharacterized protein OS=Oryctolagus cuniculus GN=GRN PE=4 SV=1
30 : E1BHY6_BOVIN 0.83 0.87 2 31 276 305 30 0 0 587 E1BHY6 Uncharacterized protein OS=Bos taurus GN=GRN PE=4 SV=2
31 : F7AB03_HORSE 0.83 0.90 2 31 281 310 30 0 0 592 F7AB03 Uncharacterized protein OS=Equus caballus GN=GRN PE=4 SV=1
32 : F7AS83_HORSE 0.83 0.90 2 31 294 323 30 0 0 605 F7AS83 Uncharacterized protein (Fragment) OS=Equus caballus GN=GRN PE=4 SV=1
33 : G3TML0_LOXAF 0.83 0.93 2 31 296 325 30 0 0 607 G3TML0 Uncharacterized protein OS=Loxodonta africana GN=GRN PE=4 SV=1
34 : G5BIZ8_HETGA 0.83 0.90 2 31 346 375 30 0 0 653 G5BIZ8 Granulin OS=Heterocephalus glaber GN=GW7_01553 PE=4 SV=1
35 : K9ILK6_DESRO 0.83 0.87 2 31 276 305 30 0 0 587 K9ILK6 Putative epithelin/granulin OS=Desmodus rotundus PE=2 SV=1
36 : Q2HJI6_BOVIN 0.83 0.87 2 31 276 305 30 0 0 587 Q2HJI6 Granulin OS=Bos taurus GN=GRN PE=2 SV=1
37 : W5PE92_SHEEP 0.83 0.87 2 31 276 305 30 0 0 588 W5PE92 Uncharacterized protein OS=Ovis aries GN=GRN PE=4 SV=1
38 : F1LMP7_RAT 0.80 0.90 2 31 293 322 30 0 0 524 F1LMP7 Granulins OS=Rattus norvegicus GN=Grn PE=2 SV=1
39 : G3V8V1_RAT 0.80 0.90 2 31 293 322 30 0 0 602 G3V8V1 Granulin, isoform CRA_c OS=Rattus norvegicus GN=Grn PE=4 SV=1
40 : GRN_RAT 0.80 0.90 2 31 279 308 30 0 0 588 P23785 Granulins OS=Rattus norvegicus GN=Grn PE=1 SV=3
41 : L5KTN6_PTEAL 0.80 0.83 2 31 295 324 30 0 0 446 L5KTN6 Granulin OS=Pteropus alecto GN=PAL_GLEAN10004241 PE=4 SV=1
42 : Q6IN42_RAT 0.80 0.90 2 31 280 309 30 0 0 511 Q6IN42 Grn protein OS=Rattus norvegicus GN=Grn PE=2 SV=1
43 : F1RQZ0_PIG 0.77 0.80 2 31 276 305 30 0 0 583 F1RQZ0 Uncharacterized protein OS=Sus scrofa GN=GRN PE=2 SV=1
44 : G1NWP4_MYOLU 0.77 0.87 2 31 290 319 30 0 0 597 G1NWP4 Uncharacterized protein (Fragment) OS=Myotis lucifugus GN=GRN PE=4 SV=1
45 : GRN_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 P28798 Granulins OS=Mus musculus GN=Grn PE=1 SV=2
46 : Q1EG87_PIG 0.77 0.80 2 31 276 305 30 0 0 583 Q1EG87 Granulin (Precursor) OS=Sus scrofa GN=GRN PE=2 SV=1
47 : Q3TVQ3_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 Q3TVQ3 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
48 : Q3TW77_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q3TW77 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
49 : Q3TWT4_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 Q3TWT4 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
50 : Q3TX66_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 Q3TX66 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
51 : Q3U8W3_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q3U8W3 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
52 : Q3U9K2_MOUSE 0.77 0.90 2 31 293 322 30 0 0 593 Q3U9K2 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Grn PE=2 SV=1
53 : Q3U9N4_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q3U9N4 Granulins OS=Mus musculus GN=Grn PE=2 SV=1
54 : Q3UAJ3_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q3UAJ3 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
55 : Q3UC19_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 Q3UC19 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
56 : Q3UD85_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q3UD85 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
57 : Q3UDD6_MOUSE 0.77 0.90 2 31 293 322 30 0 0 462 Q3UDD6 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Grn PE=2 SV=1
58 : Q544Y8_MOUSE 0.77 0.90 2 31 280 309 30 0 0 589 Q544Y8 Granulin OS=Mus musculus GN=Grn PE=2 SV=1
59 : Q9D2V3_MOUSE 0.77 0.90 2 31 293 322 30 0 0 602 Q9D2V3 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=2
60 : S7PE88_MYOBR 0.77 0.87 2 31 341 370 30 0 0 648 S7PE88 Granulins OS=Myotis brandtii GN=D623_10009489 PE=4 SV=1
61 : H0ZU79_TAEGU 0.73 0.80 2 31 198 227 30 0 0 308 H0ZU79 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=GRN PE=4 SV=1
62 : Q3U5Q6_MOUSE 0.73 0.87 2 31 293 322 30 0 0 602 Q3U5Q6 Putative uncharacterized protein OS=Mus musculus GN=Grn PE=2 SV=1
63 : F6QWT8_MONDO 0.70 0.77 2 31 285 314 30 0 0 581 F6QWT8 Uncharacterized protein OS=Monodelphis domestica GN=GRN PE=4 SV=2
64 : G3HLK3_CRIGR 0.70 0.83 2 31 283 312 30 0 0 592 G3HLK3 Granulins OS=Cricetulus griseus GN=I79_011593 PE=4 SV=1
65 : GRN_CAVPO 0.70 0.80 2 31 281 310 30 0 0 591 P28797 Granulins (Fragment) OS=Cavia porcellus GN=GRN PE=1 SV=1
66 : H0VD49_CAVPO 0.70 0.80 2 31 281 310 30 0 0 591 H0VD49 Granulins (Fragment) OS=Cavia porcellus GN=GRN PE=4 SV=1
67 : U3K4C0_FICAL 0.70 0.80 2 31 92 121 30 0 0 214 U3K4C0 Uncharacterized protein (Fragment) OS=Ficedula albicollis GN=GRN PE=4 SV=1
68 : B9U2J5_PAROL 0.67 0.80 1 30 121 150 30 0 0 298 B9U2J5 Progranulin OS=Paralichthys olivaceus GN=pGRN PE=2 SV=1
69 : F6XSF5_XENTR 0.67 0.80 2 31 526 555 30 0 0 893 F6XSF5 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=grn PE=4 SV=1
70 : F7DIL9_XENTR 0.67 0.80 2 31 196 225 30 0 0 521 F7DIL9 Uncharacterized protein (Fragment) OS=Xenopus tropicalis GN=grn PE=4 SV=1
71 : G1KLY0_ANOCA 0.67 0.77 2 31 370 399 30 0 0 603 G1KLY0 Uncharacterized protein OS=Anolis carolinensis GN=GRN PE=4 SV=2
72 : G3WTW8_SARHA 0.67 0.80 2 31 288 317 30 0 0 583 G3WTW8 Uncharacterized protein OS=Sarcophilus harrisii GN=GRN PE=4 SV=1
73 : Q0IHZ2_XENTR 0.67 0.80 2 31 729 758 30 0 0 1161 Q0IHZ2 GRN protein OS=Xenopus tropicalis GN=grn PE=2 SV=1
74 : Q28CM0_XENTR 0.67 0.80 2 31 507 536 30 0 0 1013 Q28CM0 Granulin (Fragment) OS=Xenopus tropicalis GN=grn PE=2 SV=1
75 : Q5BKF5_XENTR 0.67 0.80 2 31 729 758 30 0 0 1161 Q5BKF5 GRN protein OS=Xenopus tropicalis GN=GRN PE=2 SV=2
76 : GRN1_CYPCA 0.63 0.70 1 30 1 30 30 0 0 57 P81013 Granulin-1 OS=Cyprinus carpio PE=1 SV=1
77 : M3ZEL3_XIPMA 0.63 0.70 1 30 121 150 30 0 0 341 M3ZEL3 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
78 : Q802C1_XENLA 0.63 0.80 2 31 432 461 30 0 0 950 Q802C1 Grn-prov protein OS=Xenopus laevis GN=grn PE=2 SV=1
79 : Q9PRN7_CARAU 0.63 0.70 1 30 1 30 30 0 0 57 Q9PRN7 GGRN=GRANULIN-like peptide OS=Carassius auratus PE=1 SV=1
80 : GRN3_CYPCA 0.62 0.66 1 29 1 29 29 0 0 57 P81015 Granulin-3 OS=Cyprinus carpio PE=1 SV=1
81 : F6PSX9_CIOIN 0.61 0.68 1 28 119 146 28 0 0 240 F6PSX9 Uncharacterized protein OS=Ciona intestinalis GN=Cin.27486 PE=4 SV=2
82 : F6PSZ6_CIOIN 0.61 0.68 1 28 14 41 28 0 0 205 F6PSZ6 Uncharacterized protein OS=Ciona intestinalis PE=4 SV=2
83 : H2LGH4_ORYLA 0.61 0.71 2 29 121 148 28 0 0 206 H2LGH4 Uncharacterized protein OS=Oryzias latipes GN=LOC101168633 PE=4 SV=1
84 : H2Z610_CIOSA 0.61 0.71 1 28 81 108 28 0 0 173 H2Z610 Uncharacterized protein OS=Ciona savignyi PE=4 SV=1
85 : I4BZJ6_CIOSA 0.61 0.71 1 28 2 29 28 0 0 173 I4BZJ6 Progranulin 1 OS=Ciona savignyi PE=2 SV=1
86 : M4AR96_XIPMA 0.61 0.71 2 29 632 659 28 0 0 793 M4AR96 Uncharacterized protein (Fragment) OS=Xiphophorus maculatus PE=4 SV=1
87 : S4RVM2_PETMA 0.61 0.77 1 31 367 397 31 0 0 757 S4RVM2 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
88 : C7E2T9_ORENI 0.60 0.70 1 30 121 150 30 0 0 206 C7E2T9 Progranulin OS=Oreochromis niloticus GN=LOC100692931 PE=2 SV=1
89 : F7DVY4_ORNAN 0.60 0.67 2 31 28 57 30 0 0 316 F7DVY4 Uncharacterized protein OS=Ornithorhynchus anatinus GN=GRN PE=4 SV=2
90 : F7DVY8_ORNAN 0.60 0.67 2 31 123 152 30 0 0 466 F7DVY8 Uncharacterized protein OS=Ornithorhynchus anatinus GN=GRN PE=4 SV=1
91 : G3NST8_GASAC 0.60 0.77 1 30 117 146 30 0 0 295 G3NST8 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
92 : H3AMW7_LATCH 0.60 0.77 2 31 214 243 30 0 0 445 H3AMW7 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
93 : H3BZ49_TETNG 0.60 0.80 1 30 61 90 30 0 0 227 H3BZ49 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
94 : I3IT60_DANRE 0.60 0.67 1 30 35 64 30 0 0 152 I3IT60 Uncharacterized protein OS=Danio rerio GN=grn2 PE=4 SV=1
95 : I3JXP4_ORENI 0.60 0.70 1 30 319 348 30 0 0 542 I3JXP4 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100692931 PE=4 SV=1
96 : K9JAE3_ORENI 0.60 0.70 1 30 121 150 30 0 0 206 K9JAE3 Granulin OS=Oreochromis niloticus PE=2 SV=1
97 : Q0GJR1_OREMO 0.60 0.70 1 30 121 150 30 0 0 170 Q0GJR1 Progranulin (Fragment) OS=Oreochromis mossambicus PE=2 SV=1
98 : Q102G1_OREMO 0.60 0.70 1 30 121 150 30 0 0 206 Q102G1 Progranulin OS=Oreochromis mossambicus PE=2 SV=1
99 : Q4RKF2_TETNG 0.60 0.80 1 30 116 145 30 0 0 282 Q4RKF2 Chromosome 21 SCAF15029, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00032983001 PE=4 SV=1
100 : Q502S6_DANRE 0.60 0.67 1 30 27 56 30 0 0 139 Q502S6 Grn2 protein OS=Danio rerio GN=grn2 PE=2 SV=1
101 : Q90ZC9_DANRE 0.60 0.67 1 30 35 64 30 0 0 147 Q90ZC9 Granulin 2 OS=Danio rerio GN=grn2 PE=2 SV=1
102 : R7U8D4_CAPTE 0.60 0.70 2 31 519 548 30 0 0 829 R7U8D4 Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_162522 PE=4 SV=1
103 : V9KMM4_CALMI 0.60 0.77 2 31 9 38 30 0 0 314 V9KMM4 Granulins (Fragment) OS=Callorhynchus milii PE=2 SV=1
104 : W5L481_ASTMX 0.60 0.70 1 30 109 138 30 0 0 290 W5L481 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
105 : W5LWX3_LEPOC 0.60 0.80 2 31 186 215 30 0 0 269 W5LWX3 Uncharacterized protein (Fragment) OS=Lepisosteus oculatus PE=4 SV=1
106 : F7GQZ3_CALJA 0.59 0.74 5 31 124 150 27 0 0 431 F7GQZ3 Uncharacterized protein OS=Callithrix jacchus GN=GRN PE=4 SV=1
107 : W5MXK9_LEPOC 0.59 0.72 2 30 110 138 29 0 0 292 W5MXK9 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
108 : E9FVX7_DAPPU 0.58 0.67 5 28 48 71 24 0 0 198 E9FVX7 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_304705 PE=4 SV=1
109 : H2MGH8_ORYLA 0.58 0.71 1 31 95 125 31 0 0 746 H2MGH8 Uncharacterized protein (Fragment) OS=Oryzias latipes PE=4 SV=1
110 : A8E5C4_DANRE 0.57 0.77 1 30 35 64 30 0 0 147 A8E5C4 Granulin 1 OS=Danio rerio GN=grn1 PE=2 SV=1
111 : B5X266_SALSA 0.57 0.75 4 31 497 524 28 0 0 825 B5X266 Granulins OS=Salmo salar GN=GRN PE=2 SV=1
112 : F1R6I2_DANRE 0.57 0.67 2 31 591 620 30 0 0 729 F1R6I2 Uncharacterized protein OS=Danio rerio GN=grnb PE=4 SV=1
113 : G3PNW5_GASAC 0.57 0.73 2 31 463 492 30 0 0 625 G3PNW5 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
114 : G3PNX7_GASAC 0.57 0.73 2 31 705 734 30 0 0 867 G3PNX7 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
115 : G3PNY0_GASAC 0.57 0.73 2 31 401 430 30 0 0 563 G3PNY0 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus PE=4 SV=1
116 : H2Z8I8_CIOSA 0.57 0.70 2 31 29 58 30 0 0 126 H2Z8I8 Uncharacterized protein OS=Ciona savignyi PE=4 SV=1
117 : H3BCI8_LATCH 0.57 0.77 2 31 514 543 30 0 0 751 H3BCI8 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=2
118 : H3C3H5_TETNG 0.57 0.77 2 31 160 189 30 0 0 297 H3C3H5 Uncharacterized protein OS=Tetraodon nigroviridis GN=GRN PE=4 SV=1
119 : H3D121_TETNG 0.57 0.77 2 31 160 189 30 0 0 297 H3D121 Uncharacterized protein OS=Tetraodon nigroviridis GN=GRN PE=4 SV=1
120 : H8XYG5_BIOGL 0.57 0.73 2 31 380 409 30 0 0 418 H8XYG5 Granulin-like protein OS=Biomphalaria glabrata PE=2 SV=1
121 : M7BW30_CHEMY 0.57 0.83 2 31 298 327 30 0 0 529 M7BW30 Uncharacterized protein OS=Chelonia mydas GN=UY3_01327 PE=4 SV=1
122 : Q1EHJ0_LITLI 0.57 0.75 4 31 5 32 28 0 0 77 Q1EHJ0 Granulin-like protein (Fragment) OS=Littorina littorea PE=2 SV=1
123 : Q4SAV9_TETNG 0.57 0.77 2 31 140 169 30 0 0 414 Q4SAV9 Chromosome 3 SCAF14679, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00021242001 PE=4 SV=1
124 : Q4V9K5_DANRE 0.57 0.67 2 31 591 620 30 0 0 729 Q4V9K5 Grnb protein OS=Danio rerio GN=grnb PE=2 SV=1
125 : Q7T3M4_DANRE 0.57 0.67 2 31 591 620 30 0 0 729 Q7T3M4 Progranulin-b OS=Danio rerio GN=grnb PE=2 SV=1
126 : Q90ZC8_DANRE 0.57 0.77 1 30 35 64 30 0 0 147 Q90ZC8 Hybrid granulin OS=Danio rerio PE=2 SV=1
127 : Q90ZD0_DANRE 0.57 0.77 1 30 35 64 30 0 0 147 Q90ZD0 Granulin 1 OS=Danio rerio GN=grn1 PE=2 SV=1
128 : U6P5A2_HAECO 0.57 0.75 4 31 22 49 28 0 0 262 U6P5A2 Granulin domain containing protein OS=Haemonchus contortus GN=HCOI_00760200 PE=4 SV=1
129 : V8PIL7_OPHHA 0.57 0.77 2 31 298 327 30 0 0 802 V8PIL7 Granulin OS=Ophiophagus hannah GN=GRN PE=4 SV=1
130 : W5LK03_ASTMX 0.57 0.71 4 31 446 473 28 0 0 833 W5LK03 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
131 : W5LK06_ASTMX 0.57 0.71 4 31 349 376 28 0 0 750 W5LK06 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
132 : GRN2_CYPCA 0.55 0.59 1 29 1 29 29 0 0 57 P81014 Granulin-2 OS=Cyprinus carpio PE=1 SV=1
133 : H2UNR5_TAKRU 0.55 0.72 2 30 119 147 29 0 0 203 H2UNR5 Uncharacterized protein OS=Takifugu rubripes GN=LOC101069841 PE=4 SV=1
134 : K7EMR1_HUMAN 0.55 0.61 1 31 140 170 31 0 0 172 K7EMR1 Paragranulin (Fragment) OS=Homo sapiens GN=GRN PE=2 SV=1
135 : Q32NV6_XENLA 0.55 0.74 1 31 283 313 31 0 0 724 Q32NV6 LOC443608 protein OS=Xenopus laevis GN=LOC443608 PE=2 SV=1
136 : Q4ZJ75_XENLA 0.55 0.74 1 31 283 313 31 0 0 724 Q4ZJ75 Granulin 2 OS=Xenopus laevis PE=2 SV=1
137 : Q6GPT6_XENLA 0.55 0.74 1 31 288 318 31 0 0 729 Q6GPT6 LOC443608 protein (Fragment) OS=Xenopus laevis GN=LOC443608 PE=2 SV=1
138 : A8XM14_CAEBR 0.54 0.61 4 31 23 50 28 0 0 291 A8XM14 Protein CBR-PGRN-1 OS=Caenorhabditis briggsae GN=pgrn-1 PE=4 SV=2
139 : E3N9W9_CAERE 0.54 0.64 4 31 15 42 28 0 0 297 E3N9W9 CRE-PGRN-1 protein OS=Caenorhabditis remanei GN=Cre-pgrn-1 PE=4 SV=1
140 : H2W6B2_CAEJA 0.54 0.68 4 31 22 49 28 0 0 283 H2W6B2 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00130023 PE=4 SV=2
141 : H3BJE0_MOUSE 0.54 0.64 4 31 42 69 28 0 0 247 H3BJE0 Granulins (Fragment) OS=Mus musculus GN=Grn PE=2 SV=1
142 : K7IFA6_CAEJA 0.54 0.68 4 31 22 49 28 0 0 304 K7IFA6 Uncharacterized protein OS=Caenorhabditis japonica GN=WBGene00217278 PE=4 SV=1
143 : B4E1G5_HUMAN 0.53 0.67 2 31 207 236 30 0 0 436 B4E1G5 cDNA FLJ53692, moderately similar to Granulins OS=Homo sapiens PE=2 SV=1
144 : H2L7S0_ORYLA 0.53 0.63 2 31 368 397 30 0 0 846 H2L7S0 Uncharacterized protein OS=Oryzias latipes PE=4 SV=1
145 : H3D2S2_TETNG 0.53 0.70 2 31 381 410 30 0 0 537 H3D2S2 Uncharacterized protein (Fragment) OS=Tetraodon nigroviridis PE=4 SV=1
146 : I3ITR0_DANRE 0.53 0.67 2 31 112 141 30 0 0 182 I3ITR0 Uncharacterized protein (Fragment) OS=Danio rerio GN=grna PE=4 SV=1
147 : K7EQ05_HUMAN 0.53 0.67 2 31 207 236 30 0 0 436 K7EQ05 Paragranulin OS=Homo sapiens GN=GRN PE=2 SV=1
148 : Q1LWZ1_DANRE 0.53 0.73 1 30 35 64 30 0 0 147 Q1LWZ1 Uncharacterized protein OS=Danio rerio GN=grn1 PE=2 SV=1
149 : Q2EQQ4_CARAU 0.53 0.63 1 30 35 64 30 0 0 158 Q2EQQ4 Granulin OS=Carassius auratus PE=2 SV=1
150 : Q4S8K6_TETNG 0.53 0.70 2 31 512 541 30 0 0 668 Q4S8K6 Chromosome 2 SCAF14705, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00022298001 PE=4 SV=1
151 : B3RQV7_TRIAD 0.52 0.74 5 31 342 368 27 0 0 505 B3RQV7 Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_63706 PE=4 SV=1
152 : C3YSF6_BRAFL 0.52 0.66 2 30 710 738 29 0 0 2447 C3YSF6 Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_102424 PE=4 SV=1
153 : L7LVF0_9ACAR 0.52 0.65 1 31 212 242 31 0 0 286 L7LVF0 Putative vitellogenin receptor OS=Rhipicephalus pulchellus PE=2 SV=1
154 : T2MGV8_HYDVU 0.52 0.59 5 31 612 638 27 0 0 780 T2MGV8 Granulins (Fragment) OS=Hydra vulgaris GN=GRN PE=2 SV=1
155 : V3ZH54_LOTGI 0.52 0.71 1 31 16 46 31 0 0 62 V3ZH54 Uncharacterized protein OS=Lottia gigantea GN=LOTGIDRAFT_147753 PE=4 SV=1
156 : V4ARK5_LOTGI 0.52 0.71 1 31 70 100 31 0 0 386 V4ARK5 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_146967 PE=4 SV=1
157 : V4AZL8_LOTGI 0.52 0.71 1 31 1 31 31 0 0 289 V4AZL8 Uncharacterized protein (Fragment) OS=Lottia gigantea GN=LOTGIDRAFT_81959 PE=4 SV=1
158 : V9LBY1_CALMI 0.52 0.68 1 31 128 158 31 0 0 207 V9LBY1 Granulins (Fragment) OS=Callorhynchus milii PE=2 SV=1
159 : W5L493_ASTMX 0.52 0.72 1 29 29 57 29 0 0 101 W5L493 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
160 : W5N6W8_LEPOC 0.52 0.65 1 31 177 207 31 0 0 287 W5N6W8 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
161 : B7QL13_IXOSC 0.50 0.70 2 31 581 610 30 0 0 826 B7QL13 Granulin, putative OS=Ixodes scapularis GN=IscW_ISCW014516 PE=4 SV=1
162 : C0HA53_SALSA 0.50 0.77 2 31 741 770 30 0 0 899 C0HA53 Granulins OS=Salmo salar GN=GRN PE=2 SV=1
163 : E6ZI52_DICLA 0.50 0.67 2 31 579 608 30 0 0 743 E6ZI52 Granulins OS=Dicentrarchus labrax GN=GRN PE=4 SV=1
164 : E6ZI53_DICLA 0.50 0.67 2 31 403 432 30 0 0 567 E6ZI53 Granulins OS=Dicentrarchus labrax GN=GRN PE=4 SV=1
165 : E9QCA6_DANRE 0.50 0.67 2 31 550 579 30 0 0 873 E9QCA6 Uncharacterized protein OS=Danio rerio GN=grna PE=4 SV=1
166 : E9QI45_DANRE 0.50 0.67 2 31 550 579 30 0 0 1049 E9QI45 Uncharacterized protein OS=Danio rerio GN=grna PE=4 SV=1
167 : F1QNY0_DANRE 0.50 0.70 2 31 630 659 30 0 0 873 F1QNY0 Uncharacterized protein OS=Danio rerio GN=grna PE=4 SV=1
168 : G0NIF1_CAEBE 0.50 0.67 2 31 20 49 30 0 0 292 G0NIF1 Putative uncharacterized protein OS=Caenorhabditis brenneri GN=CAEBREN_29538 PE=4 SV=1
169 : G3NK44_GASAC 0.50 0.68 4 31 414 441 28 0 0 732 G3NK44 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
170 : H2T2A9_TAKRU 0.50 0.80 2 31 334 363 30 0 0 567 H2T2A9 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067825 PE=4 SV=1
171 : H2T2B0_TAKRU 0.50 0.80 2 31 243 272 30 0 0 564 H2T2B0 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067825 PE=4 SV=1
172 : H2T2B1_TAKRU 0.50 0.80 2 31 375 404 30 0 0 675 H2T2B1 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101067825 PE=4 SV=1
173 : H2T2B2_TAKRU 0.50 0.80 2 31 333 362 30 0 0 629 H2T2B2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101067825 PE=4 SV=1
174 : H2YBJ1_CIOSA 0.50 0.61 2 29 78 105 28 0 0 105 H2YBJ1 Uncharacterized protein OS=Ciona savignyi PE=4 SV=1
175 : I3ISQ5_DANRE 0.50 0.70 2 31 129 158 30 0 0 189 I3ISQ5 Uncharacterized protein (Fragment) OS=Danio rerio GN=grna PE=4 SV=1
176 : I3IST4_DANRE 0.50 0.67 2 31 93 122 30 0 0 147 I3IST4 Uncharacterized protein (Fragment) OS=Danio rerio GN=grna PE=4 SV=1
177 : I3JTN1_ORENI 0.50 0.63 2 31 457 486 30 0 0 858 I3JTN1 Uncharacterized protein OS=Oreochromis niloticus PE=4 SV=1
178 : I3KNY1_ORENI 0.50 0.67 2 31 665 694 30 0 0 827 I3KNY1 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100695753 PE=4 SV=1
179 : Q7JKP2_CAEEL 0.50 0.68 4 31 98 125 28 0 0 345 Q7JKP2 Protein PGRN-1, isoform b OS=Caenorhabditis elegans GN=pgrn-1 PE=2 SV=1
180 : Q8QGN9_DANRE 0.50 0.70 2 31 630 659 30 0 0 873 Q8QGN9 Granulin-A OS=Danio rerio GN=grna PE=2 SV=3
181 : Q9U362_CAEEL 0.50 0.68 4 31 98 125 28 0 0 358 Q9U362 Protein PGRN-1, isoform a OS=Caenorhabditis elegans GN=pgrn-1 PE=2 SV=1
182 : W5L4M9_ASTMX 0.50 0.63 2 31 397 426 30 0 0 808 W5L4M9 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
183 : B7P815_IXOSC 0.48 0.71 1 31 72 102 31 0 0 146 B7P815 Granulin, putative (Fragment) OS=Ixodes scapularis GN=IscW_ISCW016801 PE=4 SV=1
184 : R7T7H1_CAPTE 0.48 0.58 1 31 1 31 31 0 0 57 R7T7H1 Uncharacterized protein (Fragment) OS=Capitella teleta GN=CAPTEDRAFT_60732 PE=4 SV=1
185 : T1IV61_STRMM 0.48 0.65 1 31 282 312 31 0 0 358 T1IV61 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A V 0 0 126 44 14 V
2 2 A V E -A 10 0A 69 169 13 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
3 3 A H E - 0 0A 141 169 82 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEKKKKKKKKKKKKKKKKKKKKKKKKKKKKKEEERHQQ
4 4 A a E - 0 0A 40 182 16 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
5 5 A D E > S-A 8 0A 80 186 10 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
6 6 A M T 3 S+ 0 0 178 186 85 MMMMMMMMMMMMMMMMMMMMMMMQMMMMQMMMLQMMMLLLTLTTMTMMMMMMMMMMMMMTEMGSQQESDD
7 7 A E T 3 S+ 0 0 151 186 77 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEVYMM
8 8 A V E < -A 5 0A 32 186 82 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMMVVVVVVVVVVVVVVVVVVVVVVVVVVVVTVMVVVTYYY
9 9 A I E - 0 0A 98 186 75 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSISS
10 10 A b E -A 2 0A 2 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A P > - 0 0 50 186 14 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
12 12 A D T 3 S+ 0 0 140 186 34 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDEEEEEEEEEEEEEEDEDDEEDDDD
13 13 A G T 3 S+ 0 0 40 186 33 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGGGDDDGGGDGDDGDGGGGGGGGGGGGGDGGGGGGGSGG
14 14 A Y E < S-B 28 0B 116 186 91 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYNYNYQQNTQQ
15 15 A T E -B 27 0B 53 186 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
16 16 A a E -B 26 0B 38 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A C E -B 25 0B 79 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A R E -B 24 0B 166 186 51 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRCLYRRRRRR
19 19 A L > - 0 0 89 186 58 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLHLL
20 20 A P T 3 S+ 0 0 130 186 74 QQQQQQQQQQQQQQQQQQQQQQQAQQQQAQQQSQQQQNNNQNQPNQNNNNNNNNNNNNNPSNPTQQSPAA
21 21 A S T 3 S- 0 0 108 186 71 SSSSSSSSSSSSSSSSSSSSSSSSTSSSSSSSTSSSSTTTSTSTTSTTTTTTTTTTTTTTSTSISSSASS
22 22 A G S < S+ 0 0 60 186 10 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
23 23 A A - 0 0 35 186 76 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAKAAKAAAAAAAAAAAAAAAARSKKAADD
24 24 A W E +B 18 0B 83 186 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
25 25 A G E -B 17 0B 24 186 37 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGFGG
26 26 A b E +B 16 0B 55 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A C E -B 15 0B 75 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A P E -B 14 0B 58 186 2 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
29 29 A F + 0 0 159 181 32 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFLYII
30 30 A T 0 0 124 175 68 TTTTTTTTTTTTTTTTTTTTTAATTAAATVAATTVVVTTTVTVVAVAAAAAAAAAAAAAVEAPSPPESAA
31 31 A Q 0 0 224 151 52 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQKKKQKQQKQKKKKKKKKKKKKKQQKEKKKQ QQ
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A V 0 0 126 44 14 VV VVVV VV VV V VVVVVVVVV M VV VV V VLLL
2 2 A V E -A 10 0A 69 169 13 VVVVVIVVIVQQVVVVVVVVVVVIVVVVVIIVVVV V II VVVVVVVVVV VVVII I VVMVVV
3 3 A H E - 0 0A 141 169 82 KKQQQHYQHFCCQCCKIYRRHYHHYYYYHHHQQHQ Q CH KQQQMKKKQQ KKKHH Q YLCPPP
4 4 A a E - 0 0A 40 182 16 CCCCCCCCCCPPCPPCCCCCCCCCCCCCCCCCCCC C PCCCCCCCCCCCCCCCCCCCCCCCCPCCCCCC
5 5 A D E > S-A 8 0A 80 186 10 DDDDDDDDDDDDDDDDDDDDDGDDDDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDDDGDDDNDDDDDDDD
6 6 A M T 3 S+ 0 0 178 186 85 DGDDDANDSAGGSGGNDSDDNNNASSSSNAAEGSESSKQAESGGGTDDDDEADSSAAESPPANAVVVKKA
7 7 A E T 3 S+ 0 0 151 186 77 QQMMMAFMSGRRFQQKQYHHYQHRYYYYHRRTTSEQTKEQQSQQQSTQQTQTQSSQQGETTRHRAAAEEE
8 8 A V E < -A 5 0A 32 186 82 TMYYYTYYTISSYSSSSTTTYYYTTTTTYTTHVYHFHQSTTTEEEHVTTSTHTTTTTFFTTTYSTTTTTT
9 9 A I E - 0 0A 98 186 75 SSSSSIYSITAAMEESSYSSTYMVYYYYMVVESTREFTEVISQQQYASSSSESSSVVSATTTRRTTTETE
10 10 A b E -A 2 0A 2 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A P > - 0 0 50 186 14 PPPPPPPPPPPPPPPAPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPEEPPPEPPPPSPPPPPPPPPGGS
12 12 A D T 3 S+ 0 0 140 186 34 DDDDDDDDDSDDDDDTDDDDDDDDDDDDDDDSTDDDDDDDGSDDDSDDDDEDDSSDDDDKKSDDNNNDDD
13 13 A G T 3 S+ 0 0 40 186 33 GGGGGGGGGGGGRGGGGGGGAGGRGGGGGRRGGGSSGGEGGGDDDGGGGGGGGGGGGSGGGRGGNNNDDD
14 14 A Y E < S-B 28 0B 116 186 91 QNQQQTTQTTNNTNNTNTNNTNNTTTTTNTTSATQSNYTTTSNNNNNQQNNHQSSTTTNAATTSNNNEEE
15 15 A T E -B 27 0B 53 186 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
16 16 A a E -B 26 0B 38 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A C E -B 25 0B 79 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A R E -B 24 0B 166 186 51 RRRRRLRRLRKKRKKKKRSSRKRRRRRRRRRKRRRIREQLRIQQQKKRRKRQRIILLRKKKRRERRRKKR
19 19 A L > - 0 0 89 186 58 LLLLLSHLSSLLHLLLMHLLHLSTHHHHSTTLATTMHSLSQLLLLLMMMLLVMLLSSLTMMSNLLLLLLL
20 20 A P T 3 S+ 0 0 130 186 74 SQAAAPPAPPAAPAAPPPGGPPPPPPPPPPPPSPSVPPPPNPQQQSQSSAAASPPPPPTEEPLPAAAGGS
21 21 A S T 3 S- 0 0 108 186 71 SSSSSYKSYFSSKSSSSQFFASTYQQQQTYYSSYSDYSDYSTSSSSSPPSTGPTTYYTSSSFASSSSDDD
22 22 A G S < S+ 0 0 60 186 10 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGGGGGGSSGGGSGGGGGGGGGGGGGGQNN
23 23 A A - 0 0 35 186 76 QSDDDVADVVAAAQQEDGQQTSVKGGGGVKKQGRSSIDSIQQEEEQNTTQSQTQQIIESTTVGKKKKMTV
24 24 A W E +B 18 0B 83 186 4 WWWWWWWWWWYYWYYWWWWWWWWWWWWWWWWFWWWWWYWWWWWWWWWWWYWWWWWWWWWWWWWYWWWWWW
25 25 A G E -B 17 0B 24 186 37 GGGGGYFGYYGGFGGGGTGGFGSTTTTTSTTGSAGGKAGSAGGGGGGGGGGGGGGSSGGGGYFGGGGGGG
26 26 A b E +B 16 0B 55 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A C E -B 15 0B 75 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A P E -B 14 0B 58 186 2 PPPPPPPPPPPPPPPPPPPPPPIPPPPPIPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
29 29 A F + 0 0 159 181 32 FFIIIFYIFF Y LLYSSYHYFYYYYYFFYLYFFL FYLLMMMLIFFLLLFLLYYFLLLFYMIIIMMM
30 30 A T 0 0 124 175 68 PPAAASSAS PSPPSPSPSSSSSPPVPNPTS PSPVPPPPAPPPEPPVVSSPEPP SPEEEPPP
31 31 A Q 0 0 224 151 52 REQQQ K K QQ H QQ KQ K HKDDDKEQQKEQQKK NEQQ NKKKQQR
## ALIGNMENTS 141 - 185
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A V 0 0 126 44 14 VI V VVVVVI IIV
2 2 A V E -A 10 0A 69 169 13 VVIVVIII IP VVVIIIVVVVIIVL VVVVVVIVV V VVVV
3 3 A H E - 0 0A 141 169 82 PPKAPYFK KC CCCCRCQKKKAAKK QQQQRKAPK K PCCC
4 4 A a E - 0 0A 40 182 16 CCCCCCCCCC CS PPPPCPCCCCCCCCCCCCCCCCCCCCCCPPP
5 5 A D E > S-A 8 0A 80 186 10 DDDDDNDDDDDDDDDDDDNDPDDDNNNDDDDDDNNNDDDNDNDDG
6 6 A M T 3 S+ 0 0 178 186 85 DANGDDNAADGAGGQQQGGGDTDDDDASKEEEERADDNAAADGKG
7 7 A E T 3 S+ 0 0 151 186 77 FEVSSTVQSSQTRIQQQAREGQKKTTTETQQQQTTTTKETETKKH
8 8 A V E < -A 5 0A 32 186 82 TTSTSVSTTSSHSSSSSSFSGNSSVVHTTTTTTHHVSSTHTVFSF
9 9 A I E - 0 0A 98 186 75 RESSRASVTREEHQQQQEYESRSSAAGESSSSSYGAASEGEAKTK
10 10 A b E -A 2 0A 2 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
11 11 A P > - 0 0 50 186 14 PSPPPPPPPPPPPPPPPPPPPPAAPPPQPPPPPPPPPASPSPPPP
12 12 A D T 3 S+ 0 0 140 186 34 TDSDADSDSAASDDDDDDASDESSDDEDGGGGGTEDDSDEDDDKD
13 13 A G T 3 S+ 0 0 40 186 33 NDSQGGSGGGGKGNGGGGEHGGGGGGSDTGGGGGSGGGDSDEGGN
14 14 A Y E < S-B 28 0B 116 186 91 NEDTTSDTTTTHYNSSSSYAQSTTSSSESSSSSNSSTTESETYST
15 15 A T E -B 27 0B 53 186 0 TTTTTTTTTTTTTTTTTTTTTSTTTTTTTTTTTTTTTTTTTTTTT
16 16 A a E -B 26 0B 38 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
17 17 A C E -B 25 0B 79 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A R E -B 24 0B 166 186 51 KRQKKKQLRKKKVTKKKLQPQQKKKKKKRKKKKRKKKKKKKKKLQ
19 19 A L > - 0 0 89 186 58 LLLTLDLSSLLLALLLLLALLLLLDDNLAMMMMHNDTLLNLDALL
20 20 A P T 3 S+ 0 0 130 186 74 NSTQQKTPPQAAPESSSPPPQSQQKKISVAAAARIKQKGIGSPTP
21 21 A S T 3 S- 0 0 108 186 71 SDSESDSYFSSSSSTTTNTDGTTTDDADGSSSSYADETDADEDSD
22 22 A G S < S+ 0 0 60 186 10 GNGGGGGGGGGGGGGGGDGGGGGGGGGNGGGGGGGGGGNGNGSGG
23 23 A A - 0 0 35 186 76 DVEGGDEIIGSQSQQQQQESSQEEEEETGQQQQQEEGKTETESQR
24 24 A W E +B 18 0B 83 186 4 WWWWWWWWWWYWYYYYYWWWYWWWWWWWWWWWWWWWWWWWWWWFY
25 25 A G E -B 17 0B 24 186 37 GGGGGGGSYGGGSGGGGGGGGGGGGGGGAAAAAAGGAGGGGKSGG
26 26 A b E +B 16 0B 55 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A C E -B 15 0B 75 186 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
28 28 A P E -B 14 0B 58 186 2 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
29 29 A F + 0 0 159 181 32 IMIFLLIYFLYLLLLLLLYLYLLLLLFMLLLLLMFLMLMFMLLLY
30 30 A T 0 0 124 175 68 PPPPVPPSSVPPKPPPPE VERVVPPSPPPPPP SPPVPSPPKDP
31 31 A Q 0 0 224 151 52 EREEKEE KN DNNNNK QDKKKEEQQQEEEE QEEKNQNQNEH
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 82 7 9 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.651 21 0.86
2 2 A 85 1 12 1 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 169 0 0 0.544 18 0.87
3 3 A 0 1 1 1 1 0 5 0 2 5 0 0 9 8 3 49 13 2 0 0 169 0 0 1.761 58 0.17
4 4 A 0 0 0 0 0 0 0 0 0 8 1 0 92 0 0 0 0 0 0 0 182 0 0 0.305 10 0.83
5 5 A 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 0 6 91 186 0 0 0.354 11 0.89
6 6 A 2 3 0 26 0 0 0 10 11 1 9 4 0 0 1 3 5 6 5 15 186 0 0 2.262 75 0.14
7 7 A 2 0 1 3 2 0 4 2 3 0 5 11 0 3 5 4 15 42 0 0 186 0 0 1.986 66 0.22
8 8 A 38 0 1 2 3 0 8 1 0 0 14 26 0 5 0 0 1 2 1 0 186 0 0 1.725 57 0.17
9 9 A 4 0 3 2 1 0 5 2 5 0 54 7 0 1 4 1 4 9 0 0 186 0 0 1.748 58 0.25
10 10 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 186 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 1 3 91 3 0 0 0 0 0 1 2 0 0 186 0 0 0.420 14 0.86
12 12 A 0 0 0 0 0 0 0 3 2 0 8 2 0 0 0 2 0 13 2 68 186 0 0 1.137 37 0.66
13 13 A 0 0 0 0 0 0 0 75 1 0 5 1 0 1 3 1 1 2 3 10 186 0 0 1.012 33 0.67
14 14 A 0 0 0 0 0 0 36 0 2 0 13 20 0 1 0 0 8 4 16 1 186 0 0 1.741 58 0.09
15 15 A 0 0 0 0 0 0 0 0 0 0 1 99 0 0 0 0 0 0 0 0 186 0 0 0.033 1 0.99
16 16 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 186 0 0 0.000 0 1.00
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 186 0 0 0.000 0 1.00
18 18 A 1 5 2 0 0 0 1 0 0 1 1 1 1 0 58 24 6 1 0 0 186 0 0 1.293 43 0.49
19 19 A 1 68 0 6 0 0 0 0 3 0 6 4 0 6 0 0 1 0 2 3 186 0 0 1.250 41 0.41
20 20 A 1 1 2 0 0 0 0 3 13 25 10 3 0 0 1 3 27 2 11 0 186 0 0 1.980 66 0.26
21 21 A 0 0 1 0 3 0 6 2 3 2 49 20 0 0 0 1 3 2 1 9 186 0 0 1.672 55 0.28
22 22 A 0 0 0 0 0 0 0 93 0 0 3 0 0 0 0 0 1 0 3 1 186 0 0 0.332 11 0.89
23 23 A 4 0 3 1 0 0 0 6 36 0 7 5 0 0 2 6 14 9 1 5 186 0 0 2.084 69 0.24
24 24 A 0 0 0 0 1 91 8 0 0 0 0 0 0 0 0 0 0 0 0 0 186 0 0 0.339 11 0.95
25 25 A 0 0 0 0 3 0 3 79 5 0 5 4 0 0 0 1 0 0 0 0 186 0 0 0.868 28 0.63
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 186 0 0 0.000 0 1.00
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 186 0 0 0.000 0 1.00
28 28 A 0 0 1 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 186 0 0 0.059 1 0.97
29 29 A 0 24 7 7 48 0 12 0 0 0 1 0 0 1 0 0 0 0 0 0 181 0 0 1.407 46 0.68
30 30 A 11 0 0 0 0 0 0 0 17 33 13 18 0 0 1 1 0 5 1 1 175 0 0 1.775 59 0.31
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 28 46 13 7 3 151 0 0 1.423 47 0.47
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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