Complet list of 1g03 hssp file
Complete list of 1g03.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1G03
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER VIRAL PROTEIN 05-OCT-00 1G03
COMPND MOL_ID: 1; MOLECULE: HTLV-I CAPSID PROTEIN; CHAIN: A; FRAGMENT: N-TERM
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HUMAN T-LYMPHOTROPIC VIRUS 1; ORGANISM
AUTHOR C.CORNILESCU,F.BOUAMR,X.YAO,C.CARTER,N.TJANDRA
DBREF 1G03 A 1 134 UNP P14077 GAG_HTL1M 131 264
SEQLENGTH 134
NCHAIN 1 chain(s) in 1G03 data set
NALIGN 123
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : GAG_HTL1M 1.00 1.00 1 134 131 264 134 0 0 429 P14077 Gag polyprotein OS=Human T-cell leukemia virus 1 (strain Japan MT-2 subtype A) GN=gag PE=1 SV=3
2 : G9BL35_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 G9BL35 Pr55 OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
3 : GAG_HTL1A 0.99 1.00 1 134 131 264 134 0 0 429 P03345 Gag polyprotein OS=Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) GN=gag PE=1 SV=3
4 : GAG_HTL1C 0.99 1.00 1 134 131 264 134 0 0 429 P14076 Gag polyprotein OS=Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A) GN=gag PE=3 SV=3
5 : I6T2E6_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2E6 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
6 : I6T2F4_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2F4 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
7 : I6T2F9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2F9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
8 : I6T2G4_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2G4 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
9 : I6T2G9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2G9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
10 : I6T2H3_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6T2H3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
11 : I6TDQ9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDQ9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
12 : I6TDR3_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDR3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
13 : I6TDR7_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDR7 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
14 : I6TDS1_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDS1 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
15 : I6TDS5_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDS5 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
16 : I6TDS7_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDS7 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
17 : I6TDT2_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDT2 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
18 : I6TDT4_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TDT4 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
19 : I6TWI3_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWI3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
20 : I6TWI8_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWI8 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
21 : I6TWJ3_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWJ3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
22 : I6TWJ9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWJ9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
23 : I6TWK2_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWK2 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
24 : I6TWK8_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWK8 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
25 : I6TWL4_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6TWL4 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
26 : I6U4E9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4E9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
27 : I6U4F7_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4F7 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
28 : I6U4G1_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4G1 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
29 : I6U4G5_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4G5 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
30 : I6U4H0_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4H0 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
31 : I6U4H4_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U4H4 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
32 : I6U8C9_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8C9 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
33 : I6U8D2_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8D2 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
34 : I6U8D6_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8D6 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
35 : I6U8E0_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8E0 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
36 : I6U8E3_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8E3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
37 : I6U8F1_9DELA 0.99 1.00 1 134 1 134 134 0 0 214 I6U8F1 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
38 : K7T4T0_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 K7T4T0 Gag polyprotein OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
39 : O56621_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 O56621 Gag protein OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
40 : POL_HTL1A 0.99 1.00 1 134 131 264 134 0 0 1462 P03362 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) GN=gag-pro-pol PE=1 SV=3
41 : POL_HTL1C 0.99 1.00 1 134 131 264 134 0 0 1462 P14078 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A) GN=gag-pro-pol PE=3 SV=3
42 : PRO_HTL1A 0.99 1.00 1 134 131 264 134 0 0 651 P10274 Gag-Pro polyprotein OS=Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) GN=gag-pro PE=1 SV=3
43 : PRO_HTL1C 0.99 1.00 1 134 131 264 134 0 0 651 P14074 Gag-Pro polyprotein OS=Human T-cell leukemia virus 1 (isolate Caribbea HS-35 subtype A) GN=gag-pro PE=3 SV=3
44 : Q2VA18_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA18 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
45 : Q2VA19_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA19 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
46 : Q2VA20_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA20 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
47 : Q2VA21_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA21 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
48 : Q2VA22_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA22 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
49 : Q2VA23_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA23 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
50 : Q2VA24_9DELA 0.99 1.00 1 134 89 222 134 0 0 254 Q2VA24 Gag protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
51 : Q82230_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 Q82230 Gag protein OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
52 : Q82322_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 Q82322 Gag protein OS=Human T-lymphotropic virus 1 PE=4 SV=1
53 : Q82335_9DELA 0.99 1.00 2 134 1 133 133 0 0 213 Q82335 P24 protein (Fragment) OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
54 : Q90041_9DELA 0.99 1.00 1 134 131 264 134 0 0 429 Q90041 Gag OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
55 : Q9QR99_9DELA 0.99 1.00 1 134 131 264 134 0 0 647 Q9QR99 Pr gag-pro OS=Human T-lymphotropic virus 1 GN=gag-pro PE=4 SV=1
56 : Q9QRA0_9DELA 0.99 1.00 1 134 131 264 134 0 0 449 Q9QRA0 Pr55 OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
57 : Q9QRA1_9DELA 0.99 1.00 1 134 131 264 134 0 0 1273 Q9QRA1 Pr gag-pro-pol OS=Human T-lymphotropic virus 1 GN=gag-pro-pol PE=4 SV=1
58 : Q9WS55_9STL1 0.99 1.00 1 134 131 264 134 0 0 428 Q9WS55 Gag polyprotein OS=Simian T-lymphotropic virus 1 PE=4 SV=1
59 : V9M5B3_9STL1 0.99 1.00 1 134 135 268 134 0 0 433 V9M5B3 Gag protein OS=Simian T-lymphotropic virus 1 GN=gag PE=4 SV=1
60 : I6T2E1_9DELA 0.98 0.99 1 134 1 134 134 0 0 214 I6T2E1 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
61 : I6U4F3_9DELA 0.98 1.00 1 134 1 134 134 0 0 214 I6U4F3 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
62 : I6U8E7_9DELA 0.98 0.99 1 134 1 134 134 0 0 214 I6U8E7 Major core viral protein (Fragment) OS=Human T-lymphotropic virus 1 GN=p24 PE=4 SV=1
63 : GAG_HTL1L 0.97 0.99 1 134 131 264 134 0 0 429 P0C209 Gag polyprotein OS=Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C) GN=gag PE=3 SV=2
64 : POL_HTL1L 0.97 0.99 1 134 131 264 134 0 0 1462 P0C211 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C) GN=gag-pro-pol PE=3 SV=2
65 : PRO_HTL1L 0.97 0.99 1 134 131 264 134 0 0 651 P0C210 Gag-Pro polyprotein OS=Human T-cell leukemia virus 1 (isolate Melanesia mel5 subtype C) GN=gag-pro PE=1 SV=2
66 : U3RBW9_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RBW9 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
67 : U3RC00_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RC00 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
68 : U3RC60_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RC60 Gag OS=Human T-lymphotropic virus 1 GN=gag PE=4 SV=1
69 : U3RC92_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RC92 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
70 : U3REG1_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3REG1 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
71 : U3REG5_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3REG5 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
72 : U3RGT8_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RGT8 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
73 : U3RJN7_9DELA 0.97 0.99 1 134 131 264 134 0 0 429 U3RJN7 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
74 : Q4QY53_9STL1 0.96 1.00 1 134 141 274 134 0 0 437 Q4QY53 Gag protein OS=Simian T-lymphotropic virus 1 GN=gag PE=4 SV=1
75 : U3REF4_9DELA 0.96 0.99 1 134 131 264 134 0 0 429 U3REF4 Gag OS=Human T-lymphotropic virus 1 PE=4 SV=1
76 : B4YQA5_HTLV3 0.85 0.99 1 134 124 257 134 0 0 422 B4YQA5 Gag protein OS=Human T-cell leukemia virus 3 GN=gag PE=4 SV=1
77 : GAG_HTL3P 0.85 0.99 1 134 124 257 134 0 0 422 Q09T00 Gag polyprotein OS=Human T-cell leukemia virus 3 (strain Pyl43) GN=gag PE=3 SV=3
78 : POL_HTL3P 0.85 0.99 1 134 124 257 134 0 0 1440 Q4U0X6 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 3 (strain Pyl43) GN=gag-pro-pol PE=3 SV=4
79 : PRO_HTL3P 0.85 0.99 1 134 124 257 134 0 0 584 Q09SZ9 Gag-Pro polyprotein OS=Human T-cell leukemia virus 3 (strain Pyl43) GN=gag-pro PE=3 SV=3
80 : Q6XNP1_9DELA 0.85 0.99 1 134 124 257 134 0 0 422 Q6XNP1 Gag protein OS=Simian T-lymphotropic virus 3 PE=4 SV=1
81 : Q6XQ06_9DELA 0.85 0.98 1 134 124 257 134 0 0 422 Q6XQ06 Gag protein OS=Simian T-lymphotropic virus 3 GN=gag PE=4 SV=1
82 : Q8AGK8_9DELA 0.85 0.99 1 134 124 257 134 0 0 422 Q8AGK8 Gag polyprotein OS=Simian T-lymphotropic virus 3 PE=4 SV=1
83 : Q9WS60_HTLV2 0.85 0.97 17 134 1 118 118 0 0 281 Q9WS60 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
84 : D1MN99_9DELA 0.84 0.98 1 134 124 257 134 0 0 420 D1MN99 Gag protein OS=Simian T-cell lymphotropic virus 6 PE=4 SV=1
85 : D5I144_HTLV3 0.84 0.98 1 134 124 257 134 0 0 420 D5I144 Gag protein OS=Human T-cell leukemia virus 3 PE=4 SV=1
86 : GAG_HTL32 0.84 0.99 1 134 124 257 134 0 0 422 Q0R5R4 Gag polyprotein OS=Human T-cell leukemia virus 3 (strain 2026ND) GN=gag PE=3 SV=3
87 : POL_HTL32 0.84 0.99 1 134 124 257 134 0 0 1440 Q0R5R2 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 3 (strain 2026ND) GN=gag-pro-pol PE=3 SV=3
88 : PRO_HTL32 0.84 0.99 1 134 124 257 134 0 0 584 Q0R5R3 Gag-Pro polyprotein OS=Human T-cell leukemia virus 3 (strain 2026ND) GN=gag-pro PE=3 SV=3
89 : Q8URT3_9DELA 0.84 0.99 1 134 124 257 134 0 0 422 Q8URT3 Gag polyprotein OS=Simian T-lymphotropic virus 3 GN=gag PE=4 SV=1
90 : W5U4U2_SIV 0.84 0.97 1 134 130 263 134 0 0 424 W5U4U2 Gag protein OS=Simian T-cell lymphotropic virus 4 PE=4 SV=1
91 : W5UB23_SIV 0.84 0.97 1 134 130 263 134 0 0 424 W5UB23 Gag protein OS=Simian T-cell lymphotropic virus 4 PE=4 SV=1
92 : E5RCL2_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 E5RCL2 Gag protein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
93 : O12272_9DELA 0.83 0.96 1 134 124 258 135 1 1 423 O12272 Gag protein OS=Simian T-lymphotropic virus 3 GN=gag PE=4 SV=1
94 : Q08833_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q08833 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
95 : Q76QA3_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q76QA3 Gag protein (Precursor) OS=Human T-cell lymphotropic virus type 2b GN=gag PE=4 SV=1
96 : Q82343_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q82343 Gag protein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
97 : Q82440_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q82440 Gag polyprotein OS=Human T-cell leukemia virus 2 PE=4 SV=1
98 : Q905D6_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q905D6 Gag protein OS=Human T-cell leukemia virus 2 PE=4 SV=1
99 : Q9DKR8_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q9DKR8 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
100 : Q9DKS2_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q9DKS2 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
101 : Q9WI14_HTLV2 0.83 0.96 1 134 137 270 134 0 0 433 Q9WI14 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=4 SV=1
102 : B8LHL8_9DELA 0.82 0.96 1 134 130 263 134 0 0 424 B8LHL8 Group specific antigen OS=Human T-lymphotropic virus 4 GN=gag PE=4 SV=1
103 : GAG_HTLV2 0.82 0.96 1 134 137 270 134 0 0 433 P03346 Gag polyprotein OS=Human T-cell leukemia virus 2 GN=gag PE=1 SV=3
104 : O09241_9DELA 0.82 0.97 1 134 136 269 134 0 0 325 O09241 Gag protein OS=Simian T-lymphotropic virus 2 GN=gag PE=4 SV=1
105 : O70641_9DELA 0.82 0.96 1 134 136 269 134 0 0 1468 O70641 Gag-pro-pol polyprotein OS=Simian T-lymphotropic virus 2 PE=4 SV=1
106 : POL_HTLV2 0.82 0.96 1 134 137 270 134 0 0 1461 P03363 Gag-Pro-Pol polyprotein OS=Human T-cell leukemia virus 2 GN=gag-pro-pol PE=1 SV=4
107 : PRO_HTLV2 0.82 0.96 1 134 137 270 134 0 0 602 P03353 Gag-Pro polyprotein OS=Human T-cell leukemia virus 2 GN=gag-pro PE=1 SV=3
108 : GAG_BLVJ 0.40 0.64 6 120 114 229 116 1 1 392 P03344 Gag polyprotein OS=Bovine leukemia virus (isolate Japanese BLV-1) GN=gag PE=1 SV=3
109 : Q6PNZ1_BLV 0.39 0.63 31 134 1 105 105 1 1 184 Q6PNZ1 Gag protein (Fragment) OS=Bovine leukemia virus GN=gag PE=4 SV=1
110 : Q7ZBX1_BLV 0.39 0.63 7 134 1 129 129 1 1 214 Q7ZBX1 Gag protein (Fragment) OS=Bovine leukemia virus GN=gag PE=4 SV=1
111 : A7KWZ1_BLV 0.38 0.64 6 134 114 243 130 1 1 1417 A7KWZ1 Gag-pro-pol polyprotein (Precursor) OS=Bovine leukemia virus GN=gag-pro-pol PE=4 SV=1
112 : A7KWZ2_BLV 0.38 0.64 6 134 114 243 130 1 1 572 A7KWZ2 Gag-pro polyprotein (Precursor) OS=Bovine leukemia virus GN=gag-pro PE=4 SV=1
113 : A7KWZ3_BLV 0.38 0.64 6 134 114 243 130 1 1 393 A7KWZ3 Gag polyprotein (Precursor) OS=Bovine leukemia virus GN=gag PE=4 SV=1
114 : C5IG32_BLV 0.38 0.64 6 134 114 243 130 1 1 393 C5IG32 Gag OS=Bovine leukemia virus PE=4 SV=1
115 : GAG_BLVAU 0.38 0.62 6 120 114 228 115 0 0 392 P25058 Gag polyprotein OS=Bovine leukemia virus (isolate Australian) GN=gag PE=1 SV=3
116 : L0PHP3_BLV 0.38 0.64 6 134 114 243 130 1 1 1417 L0PHP3 Gag-pro-pol polyprotein OS=Bovine leukemia virus GN=gag-pro-pol PE=4 SV=1
117 : L0PI28_BLV 0.38 0.64 6 134 114 243 130 1 1 1417 L0PI28 Gag-pro-pol polyprotein OS=Bovine leukemia virus GN=gag-pro-pol PE=4 SV=1
118 : L0PIN0_BLV 0.38 0.64 6 134 114 243 130 1 1 1417 L0PIN0 Gag-pro-pol polyprotein OS=Bovine leukemia virus GN=gag-pro-pol PE=4 SV=1
119 : O92812_BLV 0.38 0.64 6 134 114 243 130 1 1 1417 O92812 RT-IN OS=Bovine leukemia virus GN=gag-pro-pol PE=4 SV=2
120 : Q85490_BLV 0.38 0.64 6 134 114 243 130 1 1 393 Q85490 Gag polyprotein OS=Bovine leukemia virus GN=gag PE=4 SV=1
121 : Q9WJP3_BLV 0.38 0.64 6 134 114 243 130 1 1 572 Q9WJP3 Pr66 OS=Bovine leukemia virus GN=gag-pro PE=4 SV=2
122 : T2F9E0_BLV 0.38 0.64 6 134 8 137 130 1 1 218 T2F9E0 P24 OS=Bovine leukemia virus GN=gag PE=4 SV=1
123 : Q9IG05_BLV 0.37 0.63 6 134 114 243 130 1 1 393 Q9IG05 Gag OS=Bovine leukemia virus PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A P 0 0 47 106 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPPPPPPPPPPPPP
2 2 A V E -A 12 0A 12 107 16 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
3 3 A M E +A 11 0A 72 107 11 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
4 4 A H - 0 0 83 107 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
5 5 A P - 0 0 75 107 8 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
6 6 A H S S- 0 0 193 121 62 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
7 7 A G S S+ 0 0 88 122 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
8 8 A A S S- 0 0 54 122 66 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVVVVVVVV
9 9 A P - 0 0 95 122 54 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
10 10 A P - 0 0 105 122 85 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
11 11 A N E -A 3 0A 83 122 90 NNNNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSNNNNNNNNNNNNNNNSNNNSSSSSTTTSSSSS
12 12 A H E -A 2 0A 100 122 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
13 13 A R + 0 0 117 122 1 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
14 14 A P + 0 0 65 122 45 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
15 15 A W S S+ 0 0 229 122 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
16 16 A Q S > S+ 0 0 104 122 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
17 17 A M T >> + 0 0 79 123 9 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
18 18 A K H 3> S+ 0 0 152 123 31 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
19 19 A D H <> S+ 0 0 56 123 22 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
20 20 A L H <> S+ 0 0 36 123 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
21 21 A Q H >X S+ 0 0 114 123 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
22 22 A A H 3X S+ 0 0 35 123 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
23 23 A I H 3X S+ 0 0 10 123 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
24 24 A K H S+ 0 0 1 124 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
34 34 A S T >4 - 0 0 10 124 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
35 35 A P T >> S+ 0 0 57 124 56 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
36 36 A Q H 3> S+ 0 0 101 124 78 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
37 37 A F H XX S+ 0 0 14 124 9 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
38 38 A M H <> S+ 0 0 41 124 43 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
39 39 A Q H 3X S+ 0 0 69 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
40 40 A T H > - 0 0 40 124 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
52 52 A A H 3> S+ 0 0 8 124 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
53 53 A K H >> S+ 0 0 61 124 69 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
54 54 A D H <>>S+ 0 0 3 124 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
55 55 A L H 3X5S+ 0 0 21 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
56 56 A Q H S+ 0 0 43 124 36 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
58 58 A L I <>S+ 0 0 13 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
59 59 A L I < - 0 0 37 124 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
65 65 A S H > S+ 0 0 95 124 50 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
66 66 A L H >> S+ 0 0 118 124 32 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
67 67 A V H 3> S+ 0 0 12 124 79 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
68 68 A A H 3X S+ 0 0 23 124 79 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVAAAAAAAAAA
69 69 A S H S+ 0 0 42 124 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
80 80 A S H X5S+ 0 0 63 124 65 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
81 81 A E H X5S+ 0 0 133 124 62 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
82 82 A A H X5S+ 0 0 15 124 3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
83 83 A E H X5S+ 0 0 52 124 3 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
84 84 A T H < S+ 0 0 30 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
93 93 A L T 3 S+ 0 0 18 124 76 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
94 94 A A T 3 S+ 0 0 98 124 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
95 95 A G S < S- 0 0 36 124 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
96 96 A P > - 0 0 83 124 55 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
97 97 A L H >> S+ 0 0 60 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
98 98 A R H 3> S+ 0 0 123 124 73 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
99 99 A V H 34 S+ 0 0 68 124 86 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
100 100 A Q H X< S+ 0 0 6 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
101 101 A A H 3< S+ 0 0 13 124 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
102 102 A N T 3< S+ 0 0 76 124 60 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNN
103 103 A N < - 0 0 34 124 51 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
104 104 A P S S+ 0 0 122 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
105 105 A Q S S+ 0 0 152 124 70 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
106 106 A Q + 0 0 103 124 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
107 107 A Q >> + 0 0 121 124 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
108 108 A G H >> S+ 0 0 36 124 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
109 109 A L H 3> S+ 0 0 22 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
110 110 A R H <> S+ 0 0 53 124 1 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
111 111 A R H X S+ 0 0 62 124 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
113 113 A Y H 3X S+ 0 0 33 124 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
114 114 A Q H 3X S+ 0 0 7 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
115 115 A Q H X S+ 0 0 7 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLL
119 119 A A H 3X S+ 0 0 46 124 75 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTTTTTT
120 120 A A H 3< S+ 0 0 0 124 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
121 121 A F H <4 S+ 0 0 4 122 8 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
122 122 A A H < S+ 0 0 30 122 83 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
123 123 A A S <>S+ 0 0 33 122 67 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
124 124 A L T >>5S+ 0 0 1 122 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
125 125 A P T 345S+ 0 0 36 122 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
126 126 A G T 345S+ 0 0 60 122 48 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
127 127 A S T <45S+ 0 0 94 122 84 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
128 128 A A S <> + 0 0 74 122 75 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
131 131 A P T 34 S+ 0 0 67 122 52 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
132 132 A S T 34 S- 0 0 94 122 60 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
133 133 A W T <4 0 0 173 122 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
134 134 A A < 0 0 33 122 48 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
## ALIGNMENTS 71 - 123
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A P 0 0 47 106 0 PPPPPPPPPPPP PPPPPPPPPPPPPPPPPPPPPPPP
2 2 A V E -A 12 0A 12 107 16 VVVVVVVVVVVV VVIIIVIIIVIIIIIIIIIIIIII
3 3 A M E +A 11 0A 72 107 11 MMMVMLLLLLLL LLLLLLMMLLLLLLLLLLMLLLLL
4 4 A H - 0 0 83 107 0 HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHH
5 5 A P - 0 0 75 107 8 PPPPPPPPPPPP PPPPPPSSPPPPPPPPPPSPPPPP
6 6 A H S S- 0 0 193 121 62 HHHHHHHHHHHH HHHHHHHHPHPPPPPPPPHPHHPPE EEEEEEEEEEEEE
7 7 A G S S+ 0 0 88 122 0 GGGGGGGGGGGG GGGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGGGGG
8 8 A A S S- 0 0 54 122 66 VVVAVAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAN NNNNNNNNNNNNNN
9 9 A P - 0 0 95 122 54 PPPPPPPPPPPP PPPPPPPPPPPPPPPPPPPPPPPPR RRRRRRRRRRRRRR
10 10 A P - 0 0 105 122 85 PPPPPAAAAAAA AAAAAASSSASSSSSSSSSSSSSSN NNNNNNNNNNNNNN
11 11 A N E -A 3 0A 83 122 90 SSSNSTTTTVAA AAAAATSSAAAAAAAAAASAAAAAR RRRRRRRRRRRRRR
12 12 A H E -A 2 0A 100 122 0 HHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHH
13 13 A R + 0 0 117 122 1 RRRRRRRRRRRR RRRRRRRRRRRRRRRRRRRRRSRRR RRRRRRRRRRRRRR
14 14 A P + 0 0 65 122 45 PPPPPPPPPPPP PPPPPPPPPPPPPPPPPPPPPPPPA AAAAAAAAAAAAAA
15 15 A W S S+ 0 0 229 122 0 WWWWWWWWWWWW WWWWWWWWWWWWWWWWWWWWWWWWW WWWWWWWWWWWWWW
16 16 A Q S > S+ 0 0 104 122 59 QQQQQQQQQQQQ QQQQQQQQQQQQQQQQQQQQQQQQA AAAAAAAAAAAAAA
17 17 A M T >> + 0 0 79 123 9 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMML LLLLLLLLLLLLLL
18 18 A K H 3> S+ 0 0 152 123 31 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKR RRRRRRRRRRRRRR
19 19 A D H <> S+ 0 0 56 123 22 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDE EEEEEEEEEEEEEE
20 20 A L H <> S+ 0 0 36 123 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLLLLLLLV
21 21 A Q H >X S+ 0 0 114 123 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ QQQQQQQQQQQQQQ
22 22 A A H 3X S+ 0 0 35 123 54 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAD DDDDDDDDDDDDDD
23 23 A I H 3X S+ 0 0 10 123 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII IIIIIIIIIIIIII
24 24 A K H S+ 0 0 1 124 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
34 34 A S T >4 - 0 0 10 124 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
35 35 A P T >> S+ 0 0 57 124 56 PPPPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPQQQQQQQQQQQQQQQQ
36 36 A Q H 3> S+ 0 0 101 124 78 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVVVVVVVVVVVVVVVV
37 37 A F H XX S+ 0 0 14 124 9 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFWWWWWWWWWWWWWWWW
38 38 A M H <> S+ 0 0 41 124 43 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMIITIIIIIIIIIIIII
39 39 A Q H 3X S+ 0 0 69 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHQQQQQQQQQQQQQQQQQQQQQ
40 40 A T H > - 0 0 40 124 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
52 52 A A H 3> S+ 0 0 8 124 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAPPPPPPPPPPPPPPPP
53 53 A K H >> S+ 0 0 61 124 69 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAAAAAAAAAAAAAAAA
54 54 A D H <>>S+ 0 0 3 124 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
55 55 A L H 3X5S+ 0 0 21 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
56 56 A Q H S+ 0 0 43 124 36 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDQQQQQQQQQQQQQQQQ
58 58 A L I <>S+ 0 0 13 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
59 59 A L I < - 0 0 37 124 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
65 65 A S H > S+ 0 0 95 124 50 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPPPPPPPPPPPPPPPP
66 66 A L H >> S+ 0 0 118 124 32 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVVVVVVVVVVVVVVV
67 67 A V H 3> S+ 0 0 12 124 79 VVVIVVVVVVVVVVVVVVVIIVVVVVVVVVVIVVVVVDDDDDDDDDDDDDDDD
68 68 A A H 3X S+ 0 0 23 124 79 AAAAAAAAAAAAVAAAAATVVVAVVVVVVVVVVVVVVQQQQQQQQQQQQQQQQ
69 69 A S H S+ 0 0 42 124 0 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
80 80 A S H X5S+ 0 0 63 124 65 SSSSSAAAAAAATAAAAAAAATATTTTTTTTVTTTTTAAAAAAAAAAAAAAAA
81 81 A E H X5S+ 0 0 133 124 62 EEEEEQQQQQQQEQQQQQQEEEQEEEEEEEEEEEEEEAAAAAAAAAAAAAAAA
82 82 A A H X5S+ 0 0 15 124 3 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEAAAAAAAA
83 83 A E H X5S+ 0 0 52 124 3 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEEEEE
84 84 A T H < S+ 0 0 30 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
93 93 A L T 3 S+ 0 0 18 124 76 LLLLLLLLLLLLMLLLLLLMMMLMMMMMMMMMMMMMMKQQQQQQKQQQQQQQK
94 94 A A T 3 S+ 0 0 98 124 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATNNNNNNMNNNNNNNT
95 95 A G S < S- 0 0 36 124 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
96 96 A P > - 0 0 83 124 55 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPTTTTTTTTTTTTTTTT
97 97 A L H >> S+ 0 0 60 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
98 98 A R H 3> S+ 0 0 123 124 73 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRTTTTTTTTTTTTTTTT
99 99 A V H 34 S+ 0 0 68 124 86 VVVVVVVVVVVVMVVIIIVVVMVMMMMMMMMVMMMMMQQQQQQQQQQQQQQQQ
100 100 A Q H X< S+ 0 0 6 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
101 101 A A H 3< S+ 0 0 13 124 50 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASSSSSSSSSSSSSSSS
102 102 A N T 3< S+ 0 0 76 124 60 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAA
103 103 A N < - 0 0 34 124 51 NNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQQQQQQQQQQQQQQQQ
104 104 A P S S+ 0 0 122 124 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
105 105 A Q S S+ 0 0 152 124 70 QQQQQNNNNNNNATTNNNNAAANAAAAAAAAAAAAAANNNNNNNNNNNNNNNN
106 106 A Q + 0 0 103 124 59 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQAAAAAAAAAAAAAAAA
107 107 A Q >> + 0 0 121 124 60 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQQGGGGGGGGGGGGGGGG
108 108 A G H >> S+ 0 0 36 124 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDDDDDDDDDDDDDDDD
109 109 A L H 3> S+ 0 0 22 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
110 110 A R H <> S+ 0 0 53 124 1 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRQRRRRRRRRRRRRRRRRRRRRR
111 111 A R H X S+ 0 0 62 124 36 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQQQQQQQQQQQQQQQQ
113 113 A Y H 3X S+ 0 0 33 124 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
114 114 A Q H 3X S+ 0 0 7 124 0 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
115 115 A Q H X S+ 0 0 7 124 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
119 119 A A H 3X S+ 0 0 46 124 75 TTTATSSSSSSSASSSSSSAAASAAAAAAAAAAAAAAQQQQQQQQQQQQQQQQ
120 120 A A H 3< S+ 0 0 0 124 0 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
121 121 A F H <4 S+ 0 0 4 122 8 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF WWWWWW WWWWWWWW
122 122 A A H < S+ 0 0 30 122 83 AAASASSSSSSSSSSSSSSAASSSSSSSSSSASSSSS KKKKKK KKKKKKKK
123 123 A A S <>S+ 0 0 33 122 67 AAAAAAAAAAAATAAAAAAAATATTTTTTTTATAATT NNNNNN NNNNNNNN
124 124 A L T >>5S+ 0 0 1 122 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLL LLLLLLLL
125 125 A P T 345S+ 0 0 36 122 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PPPPPP PPPPPPPP
126 126 A G T 345S+ 0 0 60 122 48 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG TTTTTT TTTTTTTT
127 127 A S T <45S+ 0 0 94 122 84 SSSSSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN RRRRRR RRRRRRRR
128 128 A A S <> + 0 0 74 122 75 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD VVVVVV VVVVVVVV
131 131 A P T 34 S+ 0 0 67 122 52 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP QQQQQQ QQQQQQQQ
132 132 A S T 34 S- 0 0 94 122 60 SSSSSTTTTTTTSTTTTTTSSSTSSSSSSSSSSSSSS PPPPPP PPPPPPPP
133 133 A W T <4 0 0 173 122 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW WWWWWW WWWWWWWW
134 134 A A < 0 0 33 122 48 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA SSSSSS SSSSSSSS
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 106 0 0 0.000 0 1.00
2 2 A 81 0 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107 0 0 0.482 16 0.83
3 3 A 1 26 0 73 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 107 0 0 0.625 20 0.89
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 107 0 0 0.000 0 1.00
5 5 A 0 0 0 0 0 0 0 0 0 97 3 0 0 0 0 0 0 0 0 0 107 0 0 0.128 4 0.92
6 6 A 0 0 0 0 0 0 0 0 0 10 0 0 0 79 0 0 0 12 0 0 121 0 0 0.669 22 0.38
7 7 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 122 0 0 0.000 0 1.00
8 8 A 10 0 0 0 0 0 0 0 78 0 0 0 0 0 0 0 0 0 12 0 122 0 0 0.681 22 0.34
9 9 A 0 0 0 0 0 0 0 0 0 88 0 0 0 0 12 0 0 0 0 0 122 0 0 0.373 12 0.46
10 10 A 0 0 0 0 0 0 0 0 11 62 14 0 0 0 0 0 0 0 12 0 122 0 0 1.076 35 0.15
11 11 A 1 0 0 0 0 0 0 0 18 0 43 7 0 0 12 0 0 0 20 0 122 0 0 1.468 49 0.10
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 122 0 0 0.000 0 1.00
13 13 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 99 0 0 0 0 0 122 0 0 0.048 1 0.98
14 14 A 0 0 0 0 0 0 0 0 12 88 0 0 0 0 0 0 0 0 0 0 122 0 0 0.373 12 0.55
15 15 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122 0 0 0.000 0 1.00
16 16 A 0 0 0 0 0 0 0 0 12 0 0 0 0 0 0 0 88 0 0 0 122 0 0 0.373 12 0.41
17 17 A 0 12 0 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.371 12 0.91
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 88 0 0 0 0 123 0 0 0.371 12 0.68
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 0 88 123 0 0 0.371 12 0.77
20 20 A 1 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.047 1 0.98
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 123 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 12 123 0 0 0.371 12 0.46
23 23 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.000 0 1.00
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 123 0 0 0.000 0 1.00
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 88 0 0 0 123 0 0 0.371 12 0.50
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 123 0 0 0.047 1 0.99
27 27 A 85 0 15 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 123 0 0 0.416 13 0.82
28 28 A 0 0 0 0 0 0 0 0 0 0 85 2 0 0 0 0 0 12 1 0 123 0 0 0.498 16 0.39
29 29 A 0 0 0 0 0 0 0 0 0 0 22 4 0 0 0 0 62 0 12 0 123 0 0 1.017 33 0.19
30 30 A 0 0 0 0 0 0 0 0 62 0 26 0 0 0 0 12 0 0 0 0 123 0 0 0.904 30 0.15
31 31 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
32 32 A 0 2 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 0 0 124 0 0 0.114 3 0.94
33 33 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
34 34 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
35 35 A 0 1 0 0 0 0 0 0 0 86 0 0 0 0 0 0 13 0 0 0 124 0 0 0.430 14 0.43
36 36 A 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0 124 0 0 0.385 12 0.22
37 37 A 0 0 0 0 87 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.91
38 38 A 0 0 12 87 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 124 0 0 0.415 13 0.57
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 99 0 0 0 124 0 0 0.047 1 0.99
40 40 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
41 41 A 11 23 65 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.864 28 0.63
42 42 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 124 0 0 0.000 0 1.00
43 43 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
44 44 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
45 45 A 83 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.455 15 0.81
46 46 A 0 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 87 0 0 0 124 0 0 0.385 12 0.26
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 124 0 0 0.000 0 1.00
48 48 A 0 0 0 0 87 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.08
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 124 0 0 0.000 0 1.00
50 50 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
51 51 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
52 52 A 0 0 0 0 0 0 0 0 87 13 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.54
53 53 A 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 87 0 0 0 0 124 0 0 0.385 12 0.31
54 54 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 124 0 0 0.000 0 1.00
55 55 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
56 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 73 13 0 0 124 0 0 0.764 25 0.53
57 57 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 87 124 0 0 0.385 12 0.63
58 58 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
59 59 A 0 87 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 124 0 0 0.385 12 -0.06
60 60 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 124 0 0 0.000 0 1.00
61 61 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
62 62 A 0 87 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.68
63 63 A 0 0 0 0 0 0 0 0 13 0 0 0 87 0 0 0 0 0 0 0 124 0 0 0.385 12 0.45
64 64 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
65 65 A 0 0 0 0 0 0 0 0 0 13 87 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.49
66 66 A 13 87 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.68
67 67 A 84 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 124 0 0 0.523 17 0.21
68 68 A 15 0 0 0 0 0 0 0 71 0 0 1 0 0 0 0 13 0 0 0 124 0 0 0.834 27 0.21
69 69 A 0 0 0 0 0 0 0 0 0 0 87 13 0 0 0 0 0 0 0 0 124 0 1 0.385 12 0.45
70 70 A 0 87 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.26
71 71 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 124 0 0 0.000 0 1.00
72 72 A 0 0 0 13 0 0 0 0 0 0 0 0 0 87 0 0 0 0 0 0 124 0 0 0.385 12 0.17
73 73 A 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 87 0 0 0 124 0 0 0.385 12 0.26
74 74 A 0 0 0 0 0 0 0 0 0 0 13 0 0 0 0 0 87 0 0 0 124 0 0 0.385 12 0.26
75 75 A 0 99 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.047 1 1.00
76 76 A 0 0 0 0 0 0 0 0 0 0 0 13 0 2 0 0 2 11 10 61 124 0 0 1.204 40 0.26
77 77 A 0 0 0 0 0 0 0 0 15 0 61 23 0 0 0 0 0 0 0 0 124 0 0 0.927 30 0.30
78 78 A 0 87 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.26
79 79 A 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
80 80 A 1 0 0 0 0 0 0 0 26 0 61 12 0 0 0 0 0 0 0 0 124 0 0 0.944 31 0.35
81 81 A 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 11 76 0 0 124 0 0 0.720 24 0.37
82 82 A 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 1 0 0 124 0 0 0.047 1 0.96
83 83 A 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 99 0 0 124 0 0 0.047 1 0.96
84 84 A 0 0 0 0 0 0 0 0 13 0 0 87 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.49
85 85 A 0 0 1 0 0 0 0 0 12 0 0 0 0 0 76 0 11 0 0 0 124 0 0 0.751 25 0.10
86 86 A 0 0 0 0 0 0 0 87 0 1 0 1 0 0 0 0 0 0 11 0 124 0 15 0.444 14 0.49
87 87 A 5 14 73 7 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 124 0 0 0.909 30 0.56
88 88 A 0 0 0 0 0 0 0 0 0 0 0 87 0 0 2 0 11 0 0 0 124 0 0 0.433 14 0.26
89 89 A 2 0 0 0 0 0 0 97 0 0 2 0 0 0 0 0 0 0 0 0 124 0 0 0.165 5 0.91
90 90 A 0 2 0 0 10 0 87 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.447 14 0.86
91 91 A 0 0 1 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 98 0 124 0 0 0.129 4 0.87
92 92 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
93 93 A 0 73 0 15 0 0 0 0 0 0 0 0 0 0 0 2 10 0 0 0 124 0 0 0.839 28 0.23
94 94 A 0 0 0 1 0 0 0 0 87 0 0 2 0 0 0 0 0 0 10 0 124 0 0 0.462 15 0.41
95 95 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
96 96 A 0 0 0 0 0 0 0 0 0 87 0 13 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.45
97 97 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
98 98 A 0 0 0 0 0 0 0 0 0 0 0 13 0 0 87 0 0 0 0 0 124 0 0 0.385 12 0.26
99 99 A 73 0 2 12 0 0 0 0 0 0 0 0 0 0 0 0 13 0 0 0 124 0 0 0.842 28 0.13
100 100 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 124 0 0 0.000 0 1.00
101 101 A 0 0 0 0 0 0 0 0 87 0 13 0 0 0 0 0 0 0 0 0 124 0 0 0.385 12 0.49
102 102 A 0 0 0 0 0 0 0 0 13 0 0 1 0 0 0 0 0 0 86 0 124 0 0 0.430 14 0.40
103 103 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 13 0 86 0 124 0 0 0.430 14 0.49
104 104 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
105 105 A 0 0 0 0 0 0 0 0 15 0 0 2 0 0 0 0 61 0 23 0 124 0 0 0.983 32 0.30
106 106 A 0 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 87 0 0 0 124 0 0 0.385 12 0.40
107 107 A 0 0 0 0 0 0 0 13 0 0 0 0 0 0 0 0 86 1 0 0 124 0 0 0.430 14 0.40
108 108 A 0 0 0 0 0 0 0 87 0 0 0 0 0 0 0 0 0 0 0 13 124 0 0 0.385 12 0.63
109 109 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
110 110 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 0 0 0 124 0 0 0.047 1 0.99
111 111 A 0 0 0 0 0 0 0 0 0 0 13 0 0 0 85 2 0 0 0 0 124 0 0 0.495 16 0.34
112 112 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 13 87 0 0 124 0 0 0.385 12 0.63
113 113 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
114 114 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 124 0 0 0.000 0 1.00
115 115 A 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 61 0 35 0 124 0 0 0.797 26 0.40
116 116 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
117 117 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
118 118 A 0 99 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.047 1 1.00
119 119 A 0 0 0 0 0 0 0 0 66 0 11 10 0 0 0 0 13 0 0 0 124 0 0 1.010 33 0.25
120 120 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 124 0 0 0.000 0 1.00
121 121 A 0 0 0 0 89 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122 0 0 0.356 11 0.91
122 122 A 0 0 0 0 0 0 0 0 64 0 25 0 0 0 0 11 0 0 0 0 122 0 0 0.879 29 0.17
123 123 A 0 0 0 0 0 0 0 0 78 0 0 11 0 0 0 0 0 0 11 0 122 0 0 0.682 22 0.32
124 124 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122 0 0 0.000 0 1.00
125 125 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 122 0 0 0.000 0 1.00
126 126 A 0 0 0 0 0 0 0 89 0 0 0 11 0 0 0 0 0 0 0 0 122 0 0 0.356 11 0.51
127 127 A 0 0 0 0 0 0 0 0 0 0 62 0 0 0 11 0 0 0 26 0 122 0 0 0.894 29 0.16
128 128 A 0 0 0 0 0 0 0 0 62 11 0 26 0 0 0 0 0 0 0 0 122 0 0 0.894 29 0.33
129 129 A 0 0 0 0 0 0 0 0 0 0 11 0 0 0 15 74 0 0 0 0 122 0 0 0.755 25 0.33
130 130 A 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 122 0 0 0.356 11 0.25
131 131 A 0 0 0 0 0 0 0 0 0 89 0 0 0 0 0 0 11 0 0 0 122 0 0 0.356 11 0.47
132 132 A 0 0 0 0 0 0 0 0 0 11 77 11 0 0 0 0 0 0 0 0 122 0 0 0.698 23 0.39
133 133 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 122 0 0 0.000 0 1.00
134 134 A 0 0 0 0 0 0 0 0 89 0 11 0 0 0 0 0 0 0 0 0 122 0 0 0.356 11 0.51
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
93 70 193 1 sYl
108 82 195 1 tPs
109 57 57 1 nTl
110 81 81 1 nTl
111 82 195 1 nTl
112 82 195 1 nTl
113 82 195 1 nTl
114 82 195 1 nTl
116 82 195 1 nTl
117 82 195 1 nTl
118 82 195 1 nTl
119 82 195 1 nTl
120 82 195 1 nTl
121 82 195 1 nTl
122 82 89 1 nTl
123 82 195 1 nTl
//