Complet list of 1fqq hssp file
Complete list of 1fqq.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1FQQ
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-15
HEADER ANTIBIOTIC 06-SEP-00 1FQQ
COMPND MOL_ID: 1; MOLECULE: BETA-DEFENSIN-2; CHAIN: A; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR M.V.SAWAI,H.P.JIA,L.LIU,V.ASEYEV,J.M.WIENCEK,P.B.MCCRAY JR., T.GANZ,W.
DBREF 1FQQ A 1 41 UNP O15263 BD02_HUMAN 24 64
SEQLENGTH 41
NCHAIN 1 chain(s) in 1FQQ data set
NALIGN 65
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : DFB4A_HUMAN 1FQQ 1.00 1.00 1 41 24 64 41 0 0 64 O15263 Beta-defensin 4A OS=Homo sapiens GN=DEFB4A PE=1 SV=1
2 : DFB4A_MACMU 0.98 1.00 1 41 24 64 41 0 0 64 Q9BDS9 Beta-defensin 4A OS=Macaca mulatta GN=DEFB4A PE=3 SV=1
3 : DFB4A_PANTR 0.98 1.00 1 41 24 64 41 0 0 64 Q9TT12 Beta-defensin 4A OS=Pan troglodytes GN=DEFB4A PE=3 SV=1
4 : G3SBD9_GORGO 0.98 1.00 1 41 15 55 41 0 0 55 G3SBD9 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla PE=4 SV=1
5 : G1RYP8_NOMLE 0.90 0.98 1 41 24 64 41 0 0 64 G1RYP8 Uncharacterized protein OS=Nomascus leucogenys GN=LOC100604016 PE=4 SV=1
6 : A4H1Z7_PONPY 0.78 0.93 1 41 4 44 41 0 0 44 A4H1Z7 Beta defensin 2 (Fragment) OS=Pongo pygmaeus GN=defb4 PE=4 SV=1
7 : H2PPI3_PONAB 0.78 0.93 1 41 24 64 41 0 0 64 H2PPI3 Uncharacterized protein OS=Pongo abelii GN=LOC100436028 PE=4 SV=1
8 : F6TSY2_CALJA 0.75 0.98 1 40 24 63 40 0 0 64 F6TSY2 Uncharacterized protein OS=Callithrix jacchus PE=4 SV=1
9 : B0LFF3_MACMU 0.73 0.90 1 41 24 64 41 0 0 64 B0LFF3 B-defensin2-like protein 1 OS=Macaca mulatta GN=Defb2L1 PE=4 SV=1
10 : B0LFF5_MACMU 0.73 0.90 1 41 24 64 41 0 0 64 B0LFF5 B-defensin2-like protein 3 OS=Macaca mulatta GN=Defb2L3 PE=4 SV=1
11 : B0LFF6_MACMU 0.73 0.90 1 41 24 64 41 0 0 64 B0LFF6 B-defensin2-like protein 4 OS=Macaca mulatta GN=Defb2L4 PE=4 SV=1
12 : F6QBM0_MACMU 0.73 0.85 1 41 24 64 41 0 0 64 F6QBM0 Uncharacterized protein OS=Macaca mulatta GN=DEFB2L PE=4 SV=1
13 : G7N0G5_MACMU 0.73 0.90 1 41 24 64 41 0 0 64 G7N0G5 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_18669 PE=4 SV=1
14 : B0LFF4_MACMU 0.71 0.85 1 41 24 64 41 0 0 64 B0LFF4 B-defensin2-like protein 2 OS=Macaca mulatta GN=Defb2L2 PE=4 SV=1
15 : B0LFF7_MACMU 0.71 0.90 1 41 24 64 41 0 0 64 B0LFF7 B-defensin2-like protein 5 OS=Macaca mulatta GN=Defb2L5 PE=4 SV=1
16 : Q7PCK5_PAPAN 0.65 0.77 2 41 1 40 40 0 0 40 Q7PCK5 DEFB4-like protein (Fragment) OS=Papio anubis PE=4 SV=1
17 : A9YPC5_EQUAS 0.60 0.80 1 40 24 63 40 0 0 64 A9YPC5 Beta-defensin 1 OS=Equus asinus GN=BD1 PE=4 SV=1
18 : Q0W9Q0_HORSE 0.60 0.80 1 40 24 63 40 0 0 64 Q0W9Q0 Beta defensin 3 OS=Equus caballus GN=defb3 PE=4 SV=1
19 : Q0W9Q1_HORSE 0.57 0.80 1 40 24 63 40 0 0 64 Q0W9Q1 Beta defensin 2 OS=Equus caballus GN=defb2 PE=4 SV=1
20 : DEFB1_PIG 0.50 0.77 1 40 24 63 40 0 0 64 O62697 Beta-defensin 1 OS=Sus scrofa GN=DEFB1 PE=3 SV=1
21 : DEFB5_RAT 0.50 0.70 1 40 24 62 40 1 1 63 Q32ZI3 Beta-defensin 5 OS=Rattus norvegicus GN=Defb5 PE=3 SV=1
22 : H9ZGM8_PIG 0.50 0.77 1 40 24 63 40 0 0 64 H9ZGM8 Prepro-beta-defensin 1 OS=Sus scrofa GN=PBD-1 PE=2 SV=1
23 : TAP_BOVIN 0.50 0.75 1 40 24 63 40 0 0 64 P25068 Tracheal antimicrobial peptide OS=Bos taurus PE=1 SV=1
24 : A4PIL5_BUBBU 0.49 0.68 1 37 7 43 37 0 0 44 A4PIL5 Neutrophil beta defensin 4 (Fragment) OS=Bubalus bubalis GN=BNBD4 PE=2 SV=1
25 : D9J275_BOVIN 0.49 0.73 4 40 1 37 37 0 0 38 D9J275 Tracheal antimicrobial peptide (Fragment) OS=Bos taurus GN=TAP PE=4 SV=1
26 : A3RJ37_BUBBU 0.48 0.73 1 40 24 63 40 0 0 64 A3RJ37 Tracheal antimicrobial peptide OS=Bubalus bubalis PE=4 SV=1
27 : DEFB4_RAT 0.48 0.68 1 40 24 62 40 1 1 63 O88514 Beta-defensin 4 OS=Rattus norvegicus GN=Defb4 PE=2 SV=1
28 : L8HY21_9CETA 0.48 0.75 1 40 24 63 40 0 0 64 L8HY21 Tracheal antimicrobial peptide OS=Bos mutus GN=M91_00569 PE=4 SV=1
29 : Q1PAH7_BUBBU 0.48 0.70 1 40 24 63 40 0 0 64 Q1PAH7 Lingual antimicrobial peptide OS=Bubalus bubalis GN=LAP PE=4 SV=1
30 : Q865P6_HORSE 0.48 0.70 1 40 24 63 40 0 0 64 Q865P6 Beta defensin 1 OS=Equus caballus GN=defb1 PE=4 SV=1
31 : DEFB4_MOUSE 0.47 0.66 2 39 25 61 38 1 1 63 P82019 Beta-defensin 4 OS=Mus musculus GN=Defb4 PE=2 SV=1
32 : Q499H9_MOUSE 0.47 0.66 2 39 25 61 38 1 1 63 Q499H9 Defensin beta 4 OS=Mus musculus GN=Defb4 PE=4 SV=1
33 : DEFB3_MOUSE 0.46 0.67 2 40 25 62 39 1 1 63 Q9WTL0 Beta-defensin 3 OS=Mus musculus GN=Defb3 PE=2 SV=1
34 : EAP_BOVIN 0.46 0.72 1 39 24 62 39 0 0 64 O02775 Enteric beta-defensin OS=Bos taurus GN=EBD PE=2 SV=1
35 : L8I347_9CETA 0.46 0.72 1 39 24 62 39 0 0 64 L8I347 Enteric beta-defensin OS=Bos mutus GN=M91_07283 PE=4 SV=1
36 : D1M7B5_CAPHI 0.45 0.65 1 40 7 46 40 0 0 47 D1M7B5 Beta-defensin (Fragment) OS=Capra hircus GN=GBD PE=4 SV=1
37 : DEFB3_BOVIN 0.45 0.65 1 40 17 56 40 0 0 57 P46161 Beta-defensin 3 (Fragment) OS=Bos taurus GN=DEFB3 PE=1 SV=3
38 : DEFB6_BOVIN 0.45 0.65 1 40 2 41 40 0 0 42 P46164 Beta-defensin 6 OS=Bos taurus GN=DEFB6 PE=1 SV=2
39 : F1MGE0_BOVIN 0.45 0.62 1 40 20 59 40 0 0 60 F1MGE0 Uncharacterized protein OS=Bos taurus PE=4 SV=2
40 : G3MXI5_BOVIN 0.45 0.70 1 40 20 59 40 0 0 60 G3MXI5 Uncharacterized protein OS=Bos taurus PE=4 SV=1
41 : O97942_CAPHI 0.45 0.65 1 40 24 63 40 0 0 64 O97942 Beta defensin-2 (Precursor) OS=Capra hircus PE=4 SV=1
42 : Q19AK9_CAPHI 0.45 0.62 1 40 24 63 40 0 0 64 Q19AK9 Beta defensin OS=Capra hircus PE=4 SV=1
43 : Q5W5H3_BOVIN 0.45 0.65 1 40 4 43 40 0 0 44 Q5W5H3 Neutrophil beta-defensin 3 (Fragment) OS=Bos taurus GN=bnbd3 PE=4 SV=1
44 : Q5W5I0_BOVIN 0.45 0.70 1 40 4 43 40 0 0 44 Q5W5I0 Beta-defensin 403 (Fragment) OS=Bos taurus GN=defb403 PE=4 SV=1
45 : DEFB2_BOVIN 0.44 0.64 2 40 1 39 39 0 0 40 P46160 Beta-defensin 2 OS=Bos taurus GN=DEFB2 PE=1 SV=1
46 : DEFB2_BUBBU 0.44 0.64 2 40 1 39 39 0 0 40 P85150 Beta-defensin 2 OS=Bubalus bubalis PE=1 SV=1
47 : DEFB7_BOVIN 0.44 0.67 1 39 24 62 39 0 0 62 P46165 Beta-defensin 7 OS=Bos taurus GN=DEFB7 PE=1 SV=3
48 : DEFB9_BOVIN 0.44 0.67 1 39 17 55 39 0 0 55 P46167 Beta-defensin 9 (Fragment) OS=Bos taurus GN=DEFB9 PE=1 SV=3
49 : Q50JA5_BOVIN 0.44 0.67 1 39 24 62 39 0 0 62 Q50JA5 Neutrophil beta-defensin 8 OS=Bos taurus GN=nbd8 PE=4 SV=1
50 : Q5W5G9_BOVIN 0.44 0.67 1 39 4 42 39 0 0 42 Q5W5G9 Neutrophil beta-defensin 7 (Fragment) OS=Bos taurus GN=bnbd7 PE=4 SV=1
51 : Q5W5H1_BOVIN 0.44 0.67 1 39 4 42 39 0 0 42 Q5W5H1 Neutrophil beta-defensin 9 (Fragment) OS=Bos taurus GN=bnbd9 PE=4 SV=1
52 : Q5W5H6_BOVIN 0.44 0.67 1 39 4 42 39 0 0 42 Q5W5H6 Beta-defensin 404 (Fragment) OS=Bos taurus GN=defb404 PE=4 SV=1
53 : Q5W5I6_BOVIN 0.44 0.64 1 39 24 62 39 0 0 62 Q5W5I6 Beta-defensin 401 OS=Bos taurus GN=defb401 PE=4 SV=1
54 : D3YJ56_CAPHI 0.43 0.60 1 40 23 62 40 0 0 63 D3YJ56 Beta-defensin 1 (Fragment) OS=Capra hircus GN=GBD-1 PE=4 SV=1
55 : DEFB1_CAPHI 0.43 0.60 1 40 24 63 40 0 0 64 O97946 Beta-defensin 1 OS=Capra hircus GN=DEFB1 PE=3 SV=1
56 : DEFB1_SHEEP 0.43 0.70 1 40 24 63 40 0 0 64 O19038 Beta-defensin 1 OS=Ovis aries GN=DEFB1 PE=3 SV=1
57 : DFB11_BOVIN 0.43 0.70 1 40 20 59 40 0 0 60 P46169 Beta-defensin 11 OS=Bos taurus GN=DEFB11 PE=1 SV=2
58 : DFB13_BOVIN 0.43 0.70 1 40 2 41 40 0 0 42 P46171 Beta-defensin 13 OS=Bos taurus GN=DEFB13 PE=1 SV=1
59 : DFBC7_BOVIN 0.43 0.65 1 40 13 52 40 0 0 53 O18815 Beta-defensin C7 (Fragment) OS=Bos taurus PE=3 SV=1
60 : G3N0Z3_BOVIN 0.43 0.70 1 40 20 59 40 0 0 60 G3N0Z3 Uncharacterized protein OS=Bos taurus PE=4 SV=1
61 : L8HN19_9CETA 0.43 0.70 1 40 4 43 40 0 0 44 L8HN19 Beta-defensin 11 (Fragment) OS=Bos mutus GN=M91_21333 PE=4 SV=1
62 : Q0PGY0_CAPHI 0.43 0.60 1 40 24 63 40 0 0 82 Q0PGY0 Lingual antimicrobial peptide OS=Capra hircus GN=LAP PE=4 SV=1
63 : Q6TMH5_BUBBU 0.43 0.65 1 40 24 63 40 0 0 63 Q6TMH5 Neutrophil beta-defensin 4 OS=Bubalus bubalis GN=BNBD4 PE=4 SV=1
64 : Q71UA5_BOVIN 0.43 0.70 1 40 20 59 40 0 0 60 Q71UA5 Neutrophil beta-defensin 12 (Fragment) OS=Bos taurus GN=NBD12 PE=4 SV=1
65 : Q7YS43_BUBBU 0.43 0.68 1 40 24 63 40 0 0 64 Q7YS43 Enteric beta defensin preproprotein OS=Bubalus bubalis PE=4 SV=1
## ALIGNMENTS 1 - 65
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 98 59 28 GGGGDDDDDDDDDDD GGGNSNGG GSGGG GGGGGGGGGGG GGGGGGGGGGGGGGGGGGG
2 2 A I + 0 0 88 65 17 IIIIIIIIIIIIIIIITIIIIIVV VIVVIIIIIIIVVAIIIVIVVVVVVVVVIIVIIIIIIIIV
3 3 A G S S+ 0 0 38 65 74 GGSSRSSNRRRRRRRRGGGGNGGG GNGGENNNSSIRRRSIIRSRRRRRRRRRRRRSSSSSRRSR
4 4 A D S S- 0 0 41 66 32 DDDDNNNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNTSSNGGGGGSSGN
5 5 A P S S+ 0 0 48 66 60 PPPPPPPPPPPPPPPPSSPSPSPPPPPPPSPPPPPHHHHPHHHPHHFFFFFHFRRRPPPPPRPPP
6 6 A V S >> S+ 0 0 99 66 42 VVVVVVVVVVVVVVVVVVIVVVVVVVILVFIIVLLRVVVLRRVLVVVVVVVVVRRLLLLLLRLLQ
7 7 A T H 3> S+ 0 0 26 66 45 TTTTTTTSTTTTTTTTTTSSSSSSSSTSSSTTSSSSTTTSSSTSTTTTTTTTTSSSSSSSSSSSS
8 8 A a H >4>S+ 0 0 0 66 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
9 9 A L H X45S+ 0 0 98 66 94 LLLLLLLILLLLLILISSALVLVAVVLGASMMLRRYRRRRYHRSRRRRRRRRRHHHRGRGRHRGH
10 10 A K H 3<5S+ 0 0 146 66 67 KKKKKRRRRRRRRRRRKKRRTRRRRRTRRQTTRLLRIIIRRRIRIIIIIIIIIRRRRRRRRRGRR
11 11 A S T <<5S- 0 0 37 66 49 SNSSSSSSSSSSSSSSNNNNHNNNNNKNNNNNKNNNNYNNNINNNNNNNNNNNNNNNNKNNNNNN
12 12 A G T < 5 + 0 0 54 66 71 GGGGGGGGGGGGGGGGGGRKGKKKKKGKKGGGGRRKRGRKKKRKRRRRRRRRRKKKGGGGGKRGK
13 13 A A < - 0 0 9 66 28 AAAAAAAAAAAAAAAAGGGGGGGGGAGGGGAAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
14 14 A I E -A 38 0A 61 66 37 IIIIIIIIIIIIIIIIFFVVIVIIIIVIIFIIRIIVFFFIVVFIFFFFFFFFFVVVVVIVVVVVI
15 15 A b E +A 37 0A 49 66 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
16 16 A H E -A 36 0A 86 65 88 HHHHHHHHHHHHHHHYIIIMWMVVVVWVVIWW.VVAVVVLAAVLVVVVVVVVVAAVIIIIIALIV
17 17 A P S S+ 0 0 76 65 34 PPPPPPPPPPPPPPPPSSPP.PPPPPGPPSGGWPPPPPPPPPPPPPPPPPPPPLLPPPLPPLPPP
18 18 A V S S- 0 0 132 66 75 VVVVVGGVGGGGGGGRPPIGGGISIIPISPPPNIIAIIIIADIIIIIIIIIIITTSIIIIITIII
19 19 A F - 0 0 130 64 78 FFFFFFFFFFFFFFFSKKGKRKRRRRCRRK..RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
20 20 A c - 0 0 26 66 4 CCCCCCCCCCCCCCCCCCCCCCCCCSTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
21 21 A P + 0 0 45 66 22 PPPPPPPPPPPPPPPPPLLAPAPPPPGPPLPPIPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
22 22 A R S S- 0 0 212 66 73 RRRRRRRKRRRGRGRGPPPPGPGGGAGGGPTTGGGRGGGGRRGGGGGGGGGGGRRRGVGVGRGVG
23 23 A R S S+ 0 0 246 65 74 RRRRRRRKRRRRRRRSGGGKSKSNNN.KNGAANNNNRRRSNNRSRRHHHHHHHNNHPPPPPNRPN
24 24 A Y + 0 0 72 66 82 YYYYYYYFYYYYYYYYMSMMFMMMMMFMMSFFTLLMTTTMMMTMTTRRRRRRRMMMMMMMMMLMM
25 25 A K E +B 39 0A 133 66 27 KKKKKKKKKKKKKKKKKKKKRKKRKKRKRKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
26 26 A Q E -B 38 0A 21 66 15 QQQQQHHQHHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
27 27 A I E + 0 0A 119 66 0 IIIIIIIVIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIII
28 28 A G E -B 37 0A 2 66 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
29 29 A T - 0 0 32 66 32 TTTTTTTTIVVVVVVVTTTTTTTTTSTTTTNNSTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
30 30 A b S S- 0 0 47 66 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
31 31 A G S S- 0 0 38 66 90 GGGGGGGGGGGGGGGGGSGGGGVLVVGVLIGGGFFHFFFFHFFFFFLLLLLLLFFRFFFFFFFFL
32 32 A L S S+ 0 0 176 66 81 LLLLLLLLVVVVVVVVLLLMLMGGGGLGGLHHVTRGGGGGGGGGGGGAGGAGGGGGGGGRGGGGG
33 33 A P S S- 0 0 67 66 49 PPPPPSSPSSSPSPSSPPPPGPRPRRPRPPFFPPPPPRPPPPPPPPPPPPPPPPPPRRRRRPPRP
34 34 A G + 0 0 70 66 82 GGGGGVVGAAALALAVGGGQKQAPAARAPGKKFSSPRPRRPPRRRRRQQRQRRPPPPPPPPPRPP
35 35 A T - 0 0 20 66 41 TTTTTIITIIIIIIIISSTVVVVVVVVVVSVVLVVVIVIVVVIVIIIIIIIIIVVVVVVVVVVVV
36 36 A K E -A 16 0A 69 66 9 KKKKKKKKKKKKKKKKKKKKRKKKKKRKKKRRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKPKK
37 37 A a E -AB 15 28A 1 66 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
38 38 A c E +AB 14 26A 0 65 0 CCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
39 39 A K E - B 0 25A 49 65 27 KKKKRKKKKKKKKKKKRKRKKKR RRKRRRKKKRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
40 40 A K 0 0 148 54 45 KKKKKKKKKKKKKKNKKKKRKRK KKKKRK R KSRSSKKSSSS KKKSSSSSKRSR
41 41 A P 0 0 107 16 0 PPPPPPP PPPPPPPP
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 75 0 0 3 0 0 0 0 0 0 0 3 19 59 0 0 0.761 25 0.71
2 2 A 29 0 68 0 0 0 0 0 2 0 0 2 0 0 0 0 0 0 0 0 65 0 0 0.752 25 0.83
3 3 A 0 0 5 0 0 0 0 20 0 0 22 0 0 0 43 0 0 2 9 0 65 0 0 1.441 48 0.25
4 4 A 0 0 0 0 0 0 0 9 0 0 6 3 0 0 0 0 0 0 74 8 66 0 0 0.910 30 0.68
5 5 A 0 0 0 0 9 0 0 0 0 62 8 0 0 15 6 0 0 0 0 0 66 0 0 1.165 38 0.39
6 6 A 62 20 6 0 2 0 0 0 0 0 0 0 0 0 9 0 2 0 0 0 66 0 0 1.131 37 0.57
7 7 A 0 0 0 0 0 0 0 0 0 0 48 52 0 0 0 0 0 0 0 0 66 0 0 0.693 23 0.54
8 8 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 66 0 0 0.000 0 1.00
9 9 A 6 27 5 3 0 0 3 6 5 0 6 0 0 9 30 0 0 0 0 0 66 0 0 1.937 64 0.05
10 10 A 0 3 20 0 0 0 0 2 0 0 0 6 0 0 56 12 2 0 0 0 66 0 0 1.303 43 0.32
11 11 A 0 0 2 0 0 0 2 0 0 0 24 0 0 2 0 5 0 0 67 0 66 0 0 0.945 31 0.51
12 12 A 0 0 0 0 0 0 0 48 0 0 0 0 0 0 24 27 0 0 0 0 66 0 0 1.049 35 0.28
13 13 A 0 0 0 0 0 0 0 70 30 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0.613 20 0.72
14 14 A 26 0 48 0 24 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 66 0 0 1.107 36 0.63
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 66 1 0 0.000 0 1.00
16 16 A 35 5 15 3 0 6 2 0 9 0 0 0 0 25 0 0 0 0 0 0 65 1 0 1.705 56 0.12
17 17 A 0 6 0 0 0 2 0 5 0 83 5 0 0 0 0 0 0 0 0 0 65 0 0 0.674 22 0.66
18 18 A 11 0 45 0 0 0 0 18 3 9 5 5 0 0 2 0 0 0 2 2 66 2 0 1.702 56 0.24
19 19 A 0 0 0 0 25 0 0 2 0 0 2 0 2 0 63 8 0 0 0 0 64 0 0 1.034 34 0.21
20 20 A 0 0 0 0 0 0 0 0 0 0 2 2 97 0 0 0 0 0 0 0 66 0 0 0.157 5 0.95
21 21 A 0 5 2 0 0 0 0 2 3 89 0 0 0 0 0 0 0 0 0 0 66 0 0 0.474 15 0.77
22 22 A 5 0 0 0 0 0 0 50 2 9 0 3 0 0 30 2 0 0 0 0 66 1 0 1.300 43 0.26
23 23 A 0 0 0 0 0 0 0 6 3 9 8 0 0 12 34 6 0 0 22 0 65 0 0 1.823 60 0.25
24 24 A 0 5 0 39 8 0 24 0 0 0 3 11 0 0 11 0 0 0 0 0 66 0 0 1.628 54 0.17
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 41 0 0 0 0 66 0 0 0.677 22 0.73
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 0 14 0 0 86 0 0 0 66 0 0 0.398 13 0.85
27 27 A 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0.079 2 0.99
28 28 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 66 0 0 0.000 0 1.00
29 29 A 11 0 2 0 0 0 0 0 0 0 3 82 0 0 0 0 0 0 3 0 66 0 0 0.678 22 0.68
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 66 0 0 0.000 0 1.00
31 31 A 6 15 2 0 32 0 0 39 0 0 2 0 0 3 2 0 0 0 0 0 66 0 0 1.484 49 0.09
32 32 A 14 23 0 3 0 0 0 50 3 0 0 2 0 3 3 0 0 0 0 0 66 0 0 1.442 48 0.18
33 33 A 0 0 0 0 3 0 0 2 0 67 12 0 0 0 17 0 0 0 0 0 66 0 0 0.994 33 0.51
34 34 A 5 3 0 0 2 0 0 17 14 26 3 0 0 0 20 5 8 0 0 0 66 0 0 1.992 66 0.17
35 35 A 48 2 33 0 0 0 0 0 0 0 5 12 0 0 0 0 0 0 0 0 66 0 0 1.177 39 0.58
36 36 A 0 0 0 0 0 0 0 0 0 2 0 0 0 0 6 92 0 0 0 0 66 0 0 0.306 10 0.91
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 66 0 0 0.000 0 1.00
38 38 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 65 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 63 37 0 0 0 0 65 0 0 0.659 21 0.73
40 40 A 0 0 0 0 0 0 0 0 0 0 24 0 0 0 13 61 0 0 2 0 54 0 0 0.982 32 0.55
41 41 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 16 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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