Complet list of 1fp0 hssp file
Complete list of 1fp0.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1FP0
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-29
HEADER TRANSCRIPTION 29-AUG-00 1FP0
COMPND MOL_ID: 1; MOLECULE: KAP-1 COREPRESSOR; CHAIN: A; FRAGMENT: PHD DOMAIN
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR A.D.CAPILI,D.C.SCHULTZ,F.J.RAUSCHER III,K.L.B.BORDEN
DBREF 1FP0 A 19 79 UNP Q13263 TIF1B_HUMAN 619 679
SEQLENGTH 88
NCHAIN 1 chain(s) in 1FP0 data set
NALIGN 50
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : F6RE40_XENTR 0.38 0.62 1 72 830 901 72 0 0 1095 F6RE40 Uncharacterized protein OS=Xenopus tropicalis GN=trim33 PE=4 SV=1
2 : B7ZRU5_XENLA 0.35 0.58 2 72 827 897 71 0 0 1091 B7ZRU5 Ectodermin OS=Xenopus laevis GN=LOC733198 PE=2 SV=1
3 : TRI33_XENLA 0.35 0.59 2 72 827 897 71 0 0 1091 Q56R14 E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1 SV=1
4 : I1Q058_ORYGL 0.33 0.52 13 79 148 216 69 1 2 813 I1Q058 Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1
5 : J3MBY1_ORYBR 0.33 0.51 12 79 268 337 70 1 2 935 J3MBY1 Uncharacterized protein OS=Oryza brachyantha GN=OB06G15250 PE=4 SV=1
6 : M3ZQ97_XIPMA 0.33 0.54 2 71 666 735 70 0 0 956 M3ZQ97 Uncharacterized protein (Fragment) OS=Xiphophorus maculatus PE=4 SV=1
7 : Q0DDZ5_ORYSJ 0.33 0.52 13 79 146 214 69 1 2 812 Q0DDZ5 Os06g0187000 protein OS=Oryza sativa subsp. japonica GN=Os06g0187000 PE=4 SV=1
8 : Q3TLF2_MOUSE 0.33 0.61 8 73 523 588 66 0 0 764 Q3TLF2 Putative uncharacterized protein OS=Mus musculus GN=Trim24 PE=2 SV=1
9 : Q5SMU7_ORYSJ 0.33 0.52 13 79 148 216 69 1 2 814 Q5SMU7 Putative origin recognition complex 1 OS=Oryza sativa subsp. japonica GN=P0470C02.11 PE=2 SV=1
10 : Q9MB44_ORYSJ 0.33 0.52 13 79 146 214 69 1 2 812 Q9MB44 Origin recognition complex 1 OS=Oryza sativa subsp. japonica GN=OsORC1 PE=2 SV=2
11 : U6CYV1_NEOVI 0.33 0.53 2 71 1 69 70 1 1 113 U6CYV1 SP100 nuclear antigen (Fragment) OS=Neovison vison GN=E9PHN1 PE=2 SV=1
12 : V9KEI0_CALMI 0.33 0.56 2 73 721 792 72 0 0 971 V9KEI0 E3 ubiquitin-protein ligase TRIM33 (Fragment) OS=Callorhynchus milii PE=2 SV=1
13 : V9KP65_CALMI 0.33 0.56 2 73 311 382 72 0 0 571 V9KP65 Tripartite motif protein TRIM33 beta (Fragment) OS=Callorhynchus milii PE=2 SV=1
14 : W5KTJ0_ASTMX 0.33 0.52 10 82 465 537 73 0 0 2019 W5KTJ0 Uncharacterized protein OS=Astyanax mexicanus PE=4 SV=1
15 : W5MWU4_LEPOC 0.33 0.61 2 76 852 926 75 0 0 1113 W5MWU4 Uncharacterized protein OS=Lepisosteus oculatus PE=4 SV=1
16 : W8BEM5_CERCA 0.33 0.54 7 83 860 938 79 1 2 1140 W8BEM5 E3 ubiquitin-protein ligase TRIM33 OS=Ceratitis capitata GN=TRI33 PE=2 SV=1
17 : B0QZH8_MOUSE 0.32 0.51 3 70 62 127 68 1 2 143 B0QZH8 Protein Chd3 (Fragment) OS=Mus musculus GN=Chd3 PE=2 SV=2
18 : B9RRE7_RICCO 0.32 0.55 1 69 119 185 69 1 2 499 B9RRE7 Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1188780 PE=4 SV=1
19 : E9HTT4_DAPPU 0.32 0.52 11 79 1136 1204 69 0 0 1431 E9HTT4 Putative uncharacterized protein OS=Daphnia pulex GN=DAPPUDRAFT_229741 PE=4 SV=1
20 : H3BA14_LATCH 0.32 0.54 1 69 949 1017 69 0 0 1221 H3BA14 Uncharacterized protein (Fragment) OS=Latimeria chalumnae PE=4 SV=1
21 : K3XVB9_SETIT 0.32 0.51 13 79 139 207 69 1 2 808 K3XVB9 Uncharacterized protein OS=Setaria italica GN=Si005876m.g PE=4 SV=1
22 : V9E298_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 V9E298 Uncharacterized protein OS=Phytophthora parasitica P1569 GN=F443_20101 PE=4 SV=1
23 : V9E2E3_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 V9E2E3 Uncharacterized protein OS=Phytophthora parasitica P1569 GN=F443_20101 PE=4 SV=1
24 : W2FS00_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2FS00 Uncharacterized protein OS=Phytophthora parasitica GN=L915_19563 PE=4 SV=1
25 : W2FUE2_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2FUE2 Uncharacterized protein OS=Phytophthora parasitica GN=L915_19563 PE=4 SV=1
26 : W2HYC5_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2HYC5 Uncharacterized protein OS=Phytophthora parasitica GN=L916_19451 PE=4 SV=1
27 : W2I0Q8_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2I0Q8 Uncharacterized protein OS=Phytophthora parasitica GN=L916_19451 PE=4 SV=1
28 : W2K4X6_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2K4X6 Uncharacterized protein OS=Phytophthora parasitica GN=L917_19294 PE=4 SV=1
29 : W2K517_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2K517 Uncharacterized protein OS=Phytophthora parasitica GN=L917_19294 PE=4 SV=1
30 : W2MAS9_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2MAS9 Uncharacterized protein OS=Phytophthora parasitica GN=L914_19330 PE=4 SV=1
31 : W2MAW3_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2MAW3 Uncharacterized protein OS=Phytophthora parasitica GN=L914_19330 PE=4 SV=1
32 : W2PIP7_PHYPN 0.32 0.57 5 79 99 173 75 0 0 362 W2PIP7 Uncharacterized protein OS=Phytophthora parasitica (strain INRA-310) GN=PPTG_17966 PE=4 SV=1
33 : W2PKE7_PHYPN 0.32 0.57 5 79 159 233 75 0 0 422 W2PKE7 Uncharacterized protein OS=Phytophthora parasitica (strain INRA-310) GN=PPTG_17966 PE=4 SV=1
34 : W2VXL5_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2VXL5 Uncharacterized protein OS=Phytophthora parasitica CJ01A1 GN=F441_19978 PE=4 SV=1
35 : W2VZ84_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2VZ84 Uncharacterized protein OS=Phytophthora parasitica CJ01A1 GN=F441_19978 PE=4 SV=1
36 : W2Y812_PHYPR 0.32 0.57 5 79 99 173 75 0 0 362 W2Y812 Uncharacterized protein OS=Phytophthora parasitica P10297 GN=F442_19925 PE=4 SV=1
37 : W2YAL4_PHYPR 0.32 0.57 5 79 159 233 75 0 0 422 W2YAL4 Uncharacterized protein OS=Phytophthora parasitica P10297 GN=F442_19925 PE=4 SV=1
38 : D0NYY2_PHYIT 0.31 0.57 5 79 167 241 75 0 0 248 D0NYY2 Putative uncharacterized protein OS=Phytophthora infestans (strain T30-4) GN=PITG_19146 PE=4 SV=1
39 : A2AHG3_MOUSE 0.30 0.54 1 80 341 420 80 0 0 556 A2AHG3 PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=4 SV=1
40 : A2AHG4_MOUSE 0.30 0.54 1 80 426 505 80 0 0 641 A2AHG4 PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=2 SV=1
41 : D3ZLT8_RAT 0.30 0.54 1 80 344 423 80 0 0 559 D3ZLT8 Protein Phf21a (Fragment) OS=Rattus norvegicus GN=Phf21a PE=4 SV=2
42 : E9PV92_MOUSE 0.30 0.54 1 80 396 475 80 0 0 611 E9PV92 PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=2 SV=2
43 : F6PSL0_CALJA 0.30 0.54 1 80 115 194 80 0 0 323 F6PSL0 Uncharacterized protein OS=Callithrix jacchus GN=PHF21A PE=4 SV=1
44 : F6PT05_CALJA 0.30 0.54 1 80 418 497 80 0 0 634 F6PT05 PHD finger protein 21A isoform b OS=Callithrix jacchus GN=PHF21A PE=2 SV=1
45 : F6TKP4_MOUSE 0.30 0.54 1 80 114 193 80 0 0 231 F6TKP4 PHD finger protein 21A (Fragment) OS=Mus musculus GN=Phf21a PE=4 SV=1
46 : F7H7D5_MACMU 0.30 0.54 1 80 117 196 80 0 0 323 F7H7D5 Uncharacterized protein OS=Macaca mulatta GN=PHF21A PE=4 SV=1
47 : F7H7E3_MACMU 0.30 0.54 1 80 418 497 80 0 0 634 F7H7E3 PHD finger protein 21A isoform b OS=Macaca mulatta GN=PHF21A PE=2 SV=1
48 : G1Q9E0_MYOLU 0.30 0.54 1 80 417 496 80 0 0 633 G1Q9E0 Uncharacterized protein OS=Myotis lucifugus GN=PHF21A PE=4 SV=1
49 : H2UCQ2_TAKRU 0.30 0.56 1 80 281 360 80 0 0 443 H2UCQ2 Uncharacterized protein OS=Takifugu rubripes PE=4 SV=1
50 : H9FVF3_MACMU 0.30 0.54 1 80 417 496 80 0 0 633 H9FVF3 PHD finger protein 21A isoform b OS=Macaca mulatta GN=PHF21A PE=2 SV=1
## ALIGNMENTS 1 - 50
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 234 16 26 V I L LLLLLLLLLLLL
2 2 A R + 0 0 147 23 65 RNN Q RQQ R K R NNNNNNNNNNNN
3 3 A G S S- 0 0 69 24 46 SSS S RSS N GA E SSSSSSSSSSSS
4 4 A S S S+ 0 0 109 24 82 SMM K RKK S RT V TTTTTTTTTTPT
5 5 A H S S+ 0 0 179 41 82 MHH P RSS M KK S KKKKKKKKKKKKKKKKKMMMMMMMMMMLM
6 6 A H S S- 0 0 121 41 75 HRR R RTT H KN V KKKKKKKKKKKKKKKKKHHHHHHHHHHHH
7 7 A H - 0 0 160 42 70 RPP P KSS RPKM S RRRRRRRRRRRRRRRRRPPPPPPPPPPQP
8 8 A H - 0 0 129 43 90 SPP P Q QHH SQKL D KKKKKKKKKKKKKKKKKGGGGGGGGGGGG
9 9 A H - 0 0 114 43 86 PRR P K TKK PVVS E RRRRRRRRRRRRRRRRRTTTTTTTTTTAT
10 10 A H S S+ 0 0 202 44 86 RGG K S ISSARHTQ K EEEEEEEEEEEEEEEEERRRRRRRRRRRR
11 11 A G S S- 0 0 34 45 85 GGG P P PLLRASGPVV AAAAAAAAAAAAAAAAAKKKKKKKKKKKK
12 12 A S S S+ 0 0 86 46 75 NVG RD V ERRRASEGET KKKKKKKKKKKKKKKKKRRRRRRRRRRLR
13 13 A D - 0 0 105 51 86 GGGRRPRHRRPAADGTEKAERRRRRRRRRRRRRRRRRRAAAAAAAAAAAA
14 14 A I - 0 0 124 51 91 GGGDEEDVDDSAADADERETEIIIIIIIIIIIIIIIIINNNNNNNNNNNN
15 15 A I - 0 0 127 51 73 DDDGGKGGGGRGGESLVKEAEAAAAAAAAAAAAAAAAAEEEEEEEEEEEE
16 16 A D - 0 0 119 51 64 GGGAAKAEAADEEGGSDRGESQQQQQQQQQQQQQQQQQEEEEEEEEEEDE
17 17 A E - 0 0 175 51 76 SSSEEPETEEFNNMDNGKEGEQQQQQQQQQQQQQQQQQHHHHHHHHHHSH
18 18 A F + 0 0 194 51 75 NNNSSVSRSSFSSENTYRSESRRRRRRRRRRRRRRRRRWWWWWWWWWWLW
19 19 A G - 0 0 31 51 66 KKKDDPDKDDDKKEKQERDKDPPPPPPPPPPPPPPPPPPPPPPPPPPPSP
20 20 A T S S+ 0 0 149 51 76 DDDAAEAEAAPEEEDETNVNAAAAAAAAAAAAAAAAAAKKKKKKKKKKKK
21 21 A L S S+ 0 0 105 50 68 DDDEEDEDEEYDDDDD.SEPEAAAAAAAAAAAAAAAAAGGGGGGGGGGGG
22 22 A D S S+ 0 0 23 50 18 DDDDDDDDDDPDDDDD.SSIDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
23 23 A D S S+ 0 0 131 51 89 PPPPPPPPPPGPPHPPDLVEPQQQQQQQQQQQQQQQQQIIIIIIIIIIII
24 24 A S S S+ 0 0 73 51 52 NNNEENENEENNNHNNHSDNEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
25 25 A A S S+ 0 0 85 51 81 EEEAAEAEAASEEMEEQDNEEMMMMMMMMMMMMMMMMLEEEEEEEEEEEE
26 26 A T S S- 0 0 60 51 30 DDDEEDEDEENDDEDDDTEDEEEEEEEEEEEEEEEEEEDDDDDDDDDDDD
27 27 A I - 0 0 65 51 54 WWWEEWEWEEIWWFWWYIIFEFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
28 28 A C - 0 0 5 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
29 29 A R S S+ 0 0 188 51 76 AAARRARARREAARAAESPARGGGGGGGGGGGGGGGGGSSSSSSSSSSTS
30 30 A V S S- 0 0 90 51 18 VVVVVVVVVVVVVVVVVFVVVIIIIIIIIIIIIIIIIIVVVVVVVVVVVV
31 31 A C S S+ 0 0 38 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
32 32 A Q + 0 0 112 51 92 QQQFFQFQFFRQQKQLQHQLFLLLLLLLLLLLLLLLLLRRRRRRRRRRRR
33 33 A K S S+ 0 0 67 51 55 NNNRRNRNRRRNNDNDQYENRKKKKKKKKKKKKKKKKKKKKKKKKKKKRK
34 34 A P S S+ 0 0 137 51 43 GGGAAGAGAAPGGGGGGGGGAGGGGGGGGGGGGGGGGGSSSSSSSSSSSS
35 35 A G S S+ 0 0 32 51 0 GGGggGgGggGGGGGGGGGGgGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
36 36 A D + 0 0 128 51 76 DDDvvEvEvvKDDENEEDEEvKKKKKKKKKKKKKKKKKQQQQQQQQQQQQ
37 37 A L - 0 0 11 51 7 LLLMMLMLMMLLLLLLILVLMLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
38 38 A V E -A 47 0A 24 51 20 LLLVVLVLVVFLLLLMIIILVLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
39 39 A M E -A 46 0A 39 51 94 CCCEECECEECCCCCCLLCCECCCCCCCCCCCCCCCCCMMMMMMMMMMMM
40 40 A C > - 0 0 1 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
41 41 A N T 3 S+ 0 0 115 51 10 EEEDDDDEDDDEEDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
42 42 A Q T 3 S- 0 0 141 51 80 KKKVVKVKVVTKKTMKTKTSAGGGGGGGGGGGGGGGGGTTTTTTTTTTTT
43 43 A C S < S- 0 0 36 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
44 44 A E S S+ 0 0 130 51 86 PPPLLPLPLLPPPPPPPPPPLEEEEEEEEEEEEEEEEESSSSSSSSSSSS
45 45 A F - 0 0 94 51 61 KKKGGKGKGGKKKSKKRSAKGRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
46 46 A C E +A 39 0A 9 51 67 VVVGGVGVGGSVVSVVATVVGAAAAAAAAAAAAAAAAAVVVVVVVVVVVV
47 47 A F E -A 38 0A 5 51 3 FFFFFFFFFFFFFYFFYFYFFYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
48 48 A H > - 0 0 12 51 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
49 49 A L T 3 S+ 0 0 16 51 11 LLLLLLLLLLELLLLQLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
50 50 A D T 3 S+ 0 0 148 51 78 TTTRRSRTRRTVVHTNVGESRNNNNNNNNNNNNNNNNNDDDDDDDDDDDD
51 51 A C S < S+ 0 0 35 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
52 52 A H S S- 0 0 60 50 71 HHHVVHVHVVHHHLHHL.IHVVVVVVVVVVVVVVVVVVLLLLLLLLLLLL
53 53 A L S > S- 0 0 89 50 92 VVVRRIRVRRIVVNVID.NVRRRRRRRRRRRRRRRRRREEEEDDEDDDDD
54 54 A P T 3 S+ 0 0 136 51 10 PPPPPPPPPPRPPPPPPLPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
55 55 A A T 3 + 0 0 50 51 60 TTTPPAPTPPHTTPTAEEPAPAAAAAAAAAAAAAAAAAPPPPPPPPPPPP
56 56 A L < + 0 0 5 51 4 LLLLLLLLLLILLLLILLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
57 57 A Q + 0 0 145 50 90 LLLRRNRTRR.LLPLSDKRLRLLLLLLLLLLLLLLLLLKKKKKKKKKKKK
58 58 A D - 0 0 85 51 78 SSSRRERNRRDTTDSSRDKSRDDDDDDDDDDDDDDDDDTTTTTTTTTTTT
59 59 A V + 0 0 103 51 43 FFFVVSVFVVVFFIFLAVVFVVVVVVVVVVVVVVVVVVIIIIIIIIIIII
60 60 A P - 0 0 87 51 5 PPPPPPPPPPNPPPPpPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
61 61 A G S S+ 0 0 30 51 74 SSSEESESEERSSNSsELRVEEEEEEEEEEEEEEEEEEKKKKKKKKKKKK
62 62 A E S S- 0 0 178 51 12 GGGGGGGGGGEGGGGEGEGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
63 63 A E S S- 0 0 14 51 76 EEEDDEDEDDPEEEESKNKEDDDDDDDDDDDDDDDDDDMMMMMMMMMMMM
64 64 A W - 0 0 21 51 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
65 65 A S - 0 0 69 51 72 IIIAAFAIAASIIIIQSFSIAFFFFFFFFFFFFFFFFFIIIIIIIIIIII
66 66 A C - 0 0 13 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
67 67 A S - 0 0 32 51 65 TTTPPSPTPPITTPTLPPPTPSSSSSSSSSSSSSSSSSPPPPPPPPPPPP
68 68 A L S S+ 0 0 127 51 88 FFFYYFYFYYFFFRFLHSQLYHHHHHHHHHHHHHHHHHRRRRRRRRRRKR
69 69 A C - 0 0 19 51 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
70 70 A H + 0 0 161 49 65 RRREEREREEMRRQRVE K ERRRRRRRRRRRRRRRRRQQQQQQQQQQQQ
71 71 A V - 0 0 59 48 44 DDDAADADAAIDDSNN T ADDDDDDDDDDDDDDDDDDDDDDDDDDDDD
72 72 A L - 0 0 140 46 87 LLLEE ELEE LLLLL P EVVVVVVVVVVVVVVVVAQQQQQQQQQQQQ
73 73 A P + 0 0 75 43 89 RR RSRR SSPSK P RSSSSSSSSSSSSSSSSSMMMMMMMMMMIM
74 74 A D S S+ 0 0 155 40 100 AA A AA LND Q APPPPPPPPPPPPPPPPPLLLLLLLLLLLL
75 75 A L S S+ 0 0 171 40 90 GG G GG KPL D GAAAAAAAAAAAAAAAAVKKKKKKKKKKKK
76 76 A K - 0 0 171 40 24 KK K KK GQA R KKKKKKKKKKKKKKKKKQKKKKKKKKKKKK
77 77 A E - 0 0 128 39 76 AA A AA K N E AKKKKKKKKKKKKKKKKKEEEEEEEEEEEE
78 78 A E S S- 0 0 167 39 96 II I II V N R VPPPPPPPPPPPPPPPPREEEEEEEEEEEE
79 79 A D S > S+ 0 0 135 39 58 EE E EE Q A G EEEEEEEEEEEEEEEEEEAAAAAAAAAAAA
80 80 A V T 3 + 0 0 79 15 76 K E IIIIIIIIIIII
81 81 A D T 3 S+ 0 0 147 3 95 V N
82 82 A L S < S- 0 0 130 3 70 L T
83 83 A Q + 0 0 151 2 0 Q
84 84 A A + 0 0 77 1 0
85 85 A C S S- 0 0 114 1 0
86 86 A K S S+ 0 0 194 1 0
87 87 A L 0 0 134 1 0
88 88 A N 0 0 196 1 0
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 6 81 6 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 0 0 0.689 22 0.73
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 22 4 13 0 61 0 23 0 0 1.036 34 0.35
3 3 A 0 0 0 0 0 0 0 8 4 0 75 0 0 0 4 0 0 4 4 0 24 0 0 0.953 31 0.53
4 4 A 4 0 0 8 0 0 0 0 0 4 13 50 0 0 8 13 0 0 0 0 24 0 0 1.545 51 0.18
5 5 A 0 2 0 32 0 0 0 0 0 2 7 0 0 7 2 46 0 0 0 0 41 0 0 1.375 45 0.17
6 6 A 2 0 0 0 0 0 0 0 0 0 0 5 0 37 10 44 0 0 2 0 41 0 0 1.285 42 0.24
7 7 A 0 0 0 2 0 0 0 0 0 36 7 0 0 2 45 5 2 0 0 0 42 0 0 1.327 44 0.30
8 8 A 0 2 0 0 0 0 0 28 0 7 5 0 0 7 0 42 7 0 0 2 43 0 0 1.596 53 0.09
9 9 A 5 0 0 0 0 0 0 0 2 7 2 28 0 2 44 7 0 2 0 0 43 0 0 1.581 52 0.14
10 10 A 0 0 2 0 0 0 0 5 2 0 7 2 0 5 32 5 2 39 0 0 44 0 0 1.680 56 0.14
11 11 A 4 4 0 0 0 0 0 11 40 9 2 0 0 0 2 27 0 0 0 0 45 0 0 1.624 54 0.14
12 12 A 4 2 0 0 0 0 0 4 2 0 4 2 0 0 33 37 0 7 2 2 46 0 0 1.736 57 0.24
13 13 A 0 0 0 0 0 0 0 8 29 4 0 2 0 2 45 2 0 4 0 4 51 0 0 1.531 51 0.14
14 14 A 2 0 35 0 0 0 0 6 6 0 2 2 0 0 2 0 0 10 24 12 51 0 0 1.829 61 0.08
15 15 A 2 2 2 0 0 0 0 16 35 0 2 0 0 0 2 4 0 29 0 6 51 0 0 1.697 56 0.27
16 16 A 0 0 0 0 0 0 0 12 10 0 4 0 0 0 2 2 33 29 0 8 51 0 0 1.686 56 0.35
17 17 A 0 0 0 2 2 0 0 4 0 2 8 2 0 22 0 2 33 16 6 2 51 0 0 1.944 64 0.23
18 18 A 2 2 0 0 4 22 2 0 0 0 18 2 0 0 37 0 0 4 8 0 51 0 0 1.767 58 0.25
19 19 A 0 0 0 0 0 0 0 2 0 57 2 0 0 0 2 16 2 4 0 16 51 0 0 1.338 44 0.33
20 20 A 2 0 0 0 0 0 0 0 45 2 0 4 0 0 0 24 0 12 4 8 51 1 0 1.559 52 0.23
21 21 A 0 2 0 0 0 0 2 24 34 2 2 0 0 0 0 0 0 14 0 20 50 0 0 1.619 54 0.31
22 22 A 0 0 2 0 0 0 0 0 0 2 4 0 0 0 0 0 0 0 0 92 50 0 0 0.362 12 0.81
23 23 A 2 2 24 0 0 0 0 2 0 29 0 0 0 2 0 0 33 2 0 4 51 0 0 1.579 52 0.10
24 24 A 0 0 0 0 0 0 0 0 0 0 4 0 0 61 0 0 0 12 22 2 51 0 0 1.089 36 0.48
25 25 A 0 2 0 33 0 0 0 0 12 0 2 0 0 0 0 0 2 45 2 2 51 0 0 1.363 45 0.18
26 26 A 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 49 2 45 51 0 0 0.913 30 0.70
27 27 A 0 0 8 0 61 18 2 0 0 0 0 0 0 0 0 0 0 12 0 0 51 0 0 1.137 37 0.46
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
29 29 A 0 0 0 0 0 0 0 33 20 2 24 2 0 0 16 0 0 4 0 0 51 0 0 1.598 53 0.24
30 30 A 65 0 33 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.725 24 0.82
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
32 32 A 0 37 0 0 12 0 0 0 0 0 0 0 0 2 25 2 22 0 0 0 51 0 0 1.453 48 0.08
33 33 A 0 0 0 0 0 0 2 0 0 0 0 0 0 0 16 57 2 2 18 4 51 0 0 1.276 42 0.45
34 34 A 0 0 0 0 0 0 0 61 12 4 24 0 0 0 0 0 0 0 0 0 51 0 0 1.022 34 0.56
35 35 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 51 0 6 0.000 0 1.00
36 36 A 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 24 14 2 14 51 0 0 1.582 52 0.24
37 37 A 2 84 2 12 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.550 18 0.92
38 38 A 14 76 6 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.799 26 0.79
39 39 A 0 4 0 25 0 0 0 0 0 0 0 0 59 0 0 0 0 12 0 0 51 0 0 1.039 34 0.05
40 40 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
41 41 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 12 2 86 51 0 0 0.456 15 0.89
42 42 A 10 0 0 2 0 0 0 33 2 0 2 31 0 0 0 18 2 0 0 0 51 0 0 1.572 52 0.19
43 43 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
44 44 A 0 12 0 0 0 0 0 0 0 29 24 0 0 0 0 0 0 35 0 0 51 0 0 1.320 44 0.14
45 45 A 0 0 0 0 2 0 0 12 2 0 4 0 0 0 59 22 0 0 0 0 51 0 0 1.176 39 0.38
46 46 A 45 0 0 0 0 0 0 12 35 0 4 2 2 0 0 0 0 0 0 0 51 0 0 1.260 42 0.32
47 47 A 0 0 0 0 37 0 63 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.660 22 0.96
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 51 0 0 0.000 0 1.00
49 49 A 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 2 0 0 51 0 0 0.193 6 0.88
50 50 A 6 0 0 0 0 0 0 2 0 0 4 12 0 2 12 0 0 2 35 25 51 0 0 1.744 58 0.21
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 1 0 0.000 0 1.00
52 52 A 46 28 2 0 0 0 0 0 0 0 0 0 0 24 0 0 0 0 0 0 50 0 0 1.134 37 0.29
53 53 A 16 2 6 0 0 0 0 0 0 0 0 0 0 0 46 0 0 10 4 16 50 0 0 1.550 51 0.07
54 54 A 0 2 0 0 0 0 0 0 0 96 0 0 0 0 2 0 0 0 0 0 51 0 0 0.193 6 0.90
55 55 A 0 0 0 0 0 0 0 0 41 39 0 14 0 2 0 0 0 4 0 0 51 0 0 1.209 40 0.40
56 56 A 0 96 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 1 0 0.165 5 0.95
57 57 A 0 48 0 0 0 0 0 0 0 2 2 2 0 0 14 26 2 0 2 2 50 0 0 1.447 48 0.09
58 58 A 0 0 0 0 0 0 0 0 0 0 12 27 0 0 14 2 0 2 2 41 51 0 0 1.476 49 0.22
59 59 A 53 2 25 0 16 0 0 0 2 0 2 0 0 0 0 0 0 0 0 0 51 0 0 1.207 40 0.56
60 60 A 0 0 0 0 0 0 0 0 0 98 0 0 0 0 0 0 0 0 2 0 51 0 1 0.097 3 0.95
61 61 A 2 2 0 0 0 0 0 2 0 0 18 0 0 0 4 24 0 47 2 0 51 0 0 1.437 47 0.25
62 62 A 0 0 0 0 0 0 0 92 0 0 0 0 0 0 0 0 0 8 0 0 51 0 0 0.275 9 0.87
63 63 A 0 0 0 24 0 0 0 0 0 2 2 0 0 0 0 4 0 22 2 45 51 0 0 1.389 46 0.24
64 64 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
65 65 A 0 0 41 0 37 0 0 0 12 0 8 0 0 0 0 0 2 0 0 0 51 0 0 1.262 42 0.27
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
67 67 A 0 2 2 0 0 0 0 0 0 43 37 16 0 0 0 0 0 0 0 0 51 0 0 1.175 39 0.35
68 68 A 0 6 0 0 18 0 12 0 0 0 2 0 0 35 24 2 2 0 0 0 51 0 0 1.664 55 0.11
69 69 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 51 0 0 0.000 0 1.00
70 70 A 2 0 0 2 0 0 0 0 0 0 0 0 0 2 51 2 27 14 0 0 49 0 0 1.291 43 0.35
71 71 A 2 0 2 0 0 0 0 0 13 0 2 2 0 0 0 0 0 0 4 75 48 0 0 0.931 31 0.55
72 72 A 35 22 0 0 0 0 0 0 2 2 0 0 0 0 0 0 26 13 0 0 46 0 0 1.482 49 0.13
73 73 A 0 0 2 26 0 0 0 0 0 7 49 0 0 0 14 2 0 0 0 0 43 0 0 1.334 44 0.10
74 74 A 0 32 0 0 0 0 0 0 15 43 0 0 0 0 0 0 3 0 3 5 40 0 0 1.348 44 -0.00
75 75 A 3 5 0 0 0 0 0 15 40 3 0 0 0 0 0 32 0 0 0 3 40 0 0 1.443 48 0.09
76 76 A 0 0 0 0 0 0 0 3 3 0 0 0 0 0 3 88 5 0 0 0 40 0 0 0.543 18 0.76
77 77 A 0 0 0 0 0 0 0 0 15 0 0 0 0 0 0 46 0 36 3 0 39 0 0 1.107 36 0.24
78 78 A 5 0 13 0 0 0 0 0 0 41 0 0 0 0 5 0 0 33 3 0 39 0 0 1.394 46 0.04
79 79 A 0 0 0 0 0 0 0 3 33 0 0 0 0 0 0 0 3 59 0 3 39 0 0 0.959 32 0.42
80 80 A 7 0 80 0 0 0 0 0 0 0 0 0 0 0 0 7 0 7 0 0 15 0 0 0.720 24 0.23
81 81 A 33 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 33 33 3 0 0 1.099 36 0.04
82 82 A 0 67 0 0 0 0 0 0 0 0 0 33 0 0 0 0 0 0 0 0 3 0 0 0.637 21 0.29
83 83 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 2 0 0 0.000 0 1.00
84 84 A 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
85 85 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
86 86 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 1 0 0 0.000 0 1.00
87 87 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
88 88 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 1 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 24 171 2 gAAv
5 25 292 2 gAAv
7 24 169 2 gAAv
9 24 171 2 gAAv
10 24 169 2 gAAv
16 55 914 2 pDEs
21 24 162 2 gGGv
//