Complet list of 1f5e hssp file
Complete list of 1f5e.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1F5E
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-28
HEADER TRANSCRIPTION/DNA 14-JUN-00 1F5E
COMPND MOL_ID: 1; MOLECULE: DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3'); CH
SOURCE MOL_ID: 1; SYNTHETIC: YES; MOL_ID: 2; SYNTHETIC: YES; MOL_ID: 3; ORGAN
AUTHOR B.CAHUZAC,R.CERDAN,B.FELENBOK,E.GUITTET
DBREF 1F5E P 1 63 UNP P21228 ALCR_EMENI 1 63
DBREF 1F5E A 1 10 PDB 1F5E 1F5E 1 10
DBREF 1F5E B 1 10 PDB 1F5E 1F5E 1 10
SEQLENGTH 65
NCHAIN 1 chain(s) in 1F5E data set
NALIGN 47
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : ALCR_EMENI 0.95 0.97 3 65 1 63 63 0 0 821 P21228 Regulatory protein alcR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcR PE=1 SV=2
2 : K9H238_PEND1 0.62 0.78 3 65 1 60 63 1 3 806 K9H238 Regulatory protein alcR OS=Penicillium digitatum (strain Pd1 / CECT 20795) GN=PDIP_11210 PE=4 SV=1
3 : W6Q4H2_PENRO 0.59 0.76 3 65 1 60 63 1 3 800 W6Q4H2 Regulatory protein alcR OS=Penicillium roqueforti GN=alcR PE=4 SV=1
4 : K9GCT0_PEND2 0.51 0.70 3 65 1 60 63 1 3 806 K9GCT0 Regulatory protein alcR OS=Penicillium digitatum (strain PHI26 / CECT 20796) GN=PDIG_06570 PE=4 SV=1
5 : A1CA83_ASPCL 0.47 0.64 3 65 1 74 74 1 11 1308 A1CA83 C6 zinc finger domain protein OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_010770 PE=4 SV=1
6 : B0Y3Q7_ASPFC 0.47 0.63 3 65 1 73 73 1 10 866 B0Y3Q7 C6 transcription factor AlcR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_055060 PE=4 SV=1
7 : Q4WU81_ASPFU 0.47 0.63 3 65 1 73 73 1 10 866 Q4WU81 C6 transcription factor AlcR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_5G07510 PE=4 SV=1
8 : V5FVH6_BYSSN 0.46 0.64 7 64 37 108 72 2 14 957 V5FVH6 C6 zinc finger domain protein OS=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) GN=PVAR5_4717 PE=4 SV=1
9 : M3B3C6_MYCFI 0.42 0.70 6 65 1 58 60 1 2 773 M3B3C6 Uncharacterized protein (Fragment) OS=Mycosphaerella fijiensis (strain CIRAD86) GN=MYCFIDRAFT_96039 PE=4 SV=1
10 : G0RF11_HYPJQ 0.41 0.52 8 59 2 62 61 1 9 773 G0RF11 Predicted protein OS=Hypocrea jecorina (strain QM6a) GN=TRIREDRAFT_105269 PE=4 SV=1
11 : I8TPH2_ASPO3 0.41 0.68 7 65 4 69 66 2 7 826 I8TPH2 Uncharacterized protein OS=Aspergillus oryzae (strain 3.042) GN=Ao3042_07751 PE=4 SV=1
12 : L7I297_MAGOY 0.41 0.51 9 55 3 63 61 1 14 702 L7I297 Regulatory protein alcR (Fragment) OS=Magnaporthe oryzae (strain Y34) GN=OOU_Y34scaffold00606g1 PE=4 SV=1
13 : Q2UDT6_ASPOR 0.41 0.68 7 65 4 69 66 2 7 826 Q2UDT6 Predicted protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090012000035 PE=4 SV=1
14 : M2SSG1_COCSN 0.40 0.55 6 65 33 109 77 2 17 931 M2SSG1 Uncharacterized protein OS=Cochliobolus sativus (strain ND90Pr / ATCC 201652) GN=COCSADRAFT_181150 PE=4 SV=1
15 : N4WRU9_COCH4 0.40 0.55 6 65 33 109 77 2 17 913 N4WRU9 Uncharacterized protein OS=Cochliobolus heterostrophus (strain C4 / ATCC 48331 / race T) GN=COCC4DRAFT_51704 PE=4 SV=1
16 : W6XXZ5_COCCA 0.40 0.55 6 65 33 109 77 2 17 913 W6XXZ5 Uncharacterized protein OS=Bipolaris zeicola 26-R-13 GN=COCCADRAFT_7380 PE=4 SV=1
17 : W6Z947_COCMI 0.40 0.55 6 65 33 109 77 2 17 937 W6Z947 Uncharacterized protein OS=Bipolaris oryzae ATCC 44560 GN=COCMIDRAFT_4668 PE=4 SV=1
18 : W7ERS0_COCVI 0.40 0.55 6 65 33 109 77 2 17 913 W7ERS0 Uncharacterized protein OS=Bipolaris victoriae FI3 GN=COCVIDRAFT_26958 PE=4 SV=1
19 : E4ZYL9_LEPMJ 0.38 0.53 8 64 35 108 74 2 17 909 E4ZYL9 Putative uncharacterized protein OS=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) GN=LEMA_P108100.1 PE=4 SV=1
20 : V5HYH2_BYSSN 0.38 0.51 3 56 1 74 74 2 20 966 V5HYH2 C6 zinc finger domain protein OS=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) GN=PVAR5_3660 PE=4 SV=1
21 : B6HLT5_PENCW 0.37 0.58 14 65 29 80 52 0 0 154 B6HLT5 Pc21g21320 protein OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=Pc21g21320 PE=4 SV=1
22 : Q3HUR7_PENCH 0.37 0.58 14 65 29 80 52 0 0 154 Q3HUR7 Putative uncharacterized protein OS=Penicillium chrysogenum PE=2 SV=1
23 : S0EJ52_GIBF5 0.37 0.48 8 54 7 71 65 2 18 878 S0EJ52 Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_09271 PE=4 SV=1
24 : C1GKT2_PARBD 0.36 0.52 4 59 47 96 56 1 6 156 C1GKT2 Uncharacterized protein OS=Paracoccidioides brasiliensis (strain Pb18) GN=PADG_07939 PE=4 SV=1
25 : Q0CGH3_ASPTN 0.36 0.54 4 59 44 93 56 1 6 298 Q0CGH3 Predicted protein OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_07219 PE=4 SV=1
26 : S3BYJ6_OPHP1 0.36 0.49 3 59 1 77 77 2 20 1026 S3BYJ6 Uncharacterized protein OS=Ophiostoma piceae (strain UAMH 11346) GN=F503_03618 PE=4 SV=1
27 : C7Z9E1_NECH7 0.35 0.44 7 59 1 78 78 2 25 906 C7Z9E1 Predicted protein OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=NECHADRAFT_100913 PE=4 SV=1
28 : F9G2N7_FUSOF 0.35 0.50 7 59 1 78 78 3 25 921 F9G2N7 Uncharacterized protein OS=Fusarium oxysporum (strain Fo5176) GN=FOXB_12919 PE=4 SV=1
29 : J9N541_FUSO4 0.35 0.50 7 59 1 78 78 3 25 921 J9N541 Uncharacterized protein OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=FOXG_10302 PE=4 SV=1
30 : N1RZV4_FUSC4 0.35 0.50 7 59 1 78 78 3 25 920 N1RZV4 Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 4) GN=FOC4_g10009416 PE=4 SV=1
31 : N4TTV5_FUSC1 0.35 0.50 7 59 1 78 78 3 25 921 N4TTV5 Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 1) GN=FOC1_g10008310 PE=4 SV=1
32 : S0E228_GIBF5 0.35 0.50 7 59 1 78 78 3 25 930 S0E228 Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_07661 PE=4 SV=1
33 : W7MP93_GIBM7 0.35 0.50 7 59 1 78 78 3 25 924 W7MP93 Uncharacterized protein OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=FVEG_08953 PE=4 SV=1
34 : H6C1L0_EXODN 0.34 0.45 7 58 14 93 80 3 28 925 H6C1L0 Putative uncharacterized protein OS=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) GN=HMPREF1120_06608 PE=4 SV=1
35 : I1RGK4_GIBZE 0.34 0.50 7 59 1 69 70 3 18 829 I1RGK4 Uncharacterized protein OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FG02874.1 PE=4 SV=1
36 : U7PU59_SPOS1 0.34 0.47 7 59 1 79 79 3 26 1052 U7PU59 Uncharacterized protein OS=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) GN=HMPREF1624_05078 PE=4 SV=1
37 : F9F9S3_FUSOF 0.33 0.47 7 59 1 69 70 3 18 833 F9F9S3 Uncharacterized protein OS=Fusarium oxysporum (strain Fo5176) GN=FOXB_03148 PE=4 SV=1
38 : I1RTH7_GIBZE 0.33 0.47 7 59 1 73 73 2 20 845 I1RTH7 Uncharacterized protein OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FG07482.1 PE=4 SV=1
39 : K3V9R3_FUSPC 0.33 0.49 7 59 1 73 73 2 20 845 K3V9R3 Uncharacterized protein OS=Fusarium pseudograminearum (strain CS3096) GN=FPSE_09446 PE=4 SV=1
40 : K3VI46_FUSPC 0.33 0.49 7 59 1 69 69 2 16 824 K3VI46 ZBC1 OS=Fusarium pseudograminearum (strain CS3096) GN=ZBC1 PE=4 SV=1
41 : K3VXN7_FUSPC 0.33 0.45 7 59 1 78 78 2 25 920 K3VXN7 Uncharacterized protein OS=Fusarium pseudograminearum (strain CS3096) GN=FPSE_10603 PE=4 SV=1
42 : N1S826_FUSC4 0.33 0.47 7 59 1 69 70 3 18 826 N1S826 Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 4) GN=FOC4_g10002820 PE=4 SV=1
43 : S0E4E5_GIBF5 0.33 0.47 7 59 1 69 70 3 18 833 S0E4E5 Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_05511 PE=4 SV=1
44 : W7N4X0_GIBM7 0.33 0.47 7 59 1 69 70 3 18 835 W7N4X0 Uncharacterized protein OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=FVEG_13171 PE=4 SV=1
45 : C7ZD87_NECH7 0.32 0.52 7 59 2 70 69 2 16 797 C7ZD87 Putative uncharacterized protein OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=NECHADRAFT_105211 PE=4 SV=1
46 : G8XZQ9_PICSO 0.32 0.58 1 65 84 146 71 3 14 974 G8XZQ9 Piso0_005711 protein OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_005711 PE=4 SV=1
47 : J9NKI1_FUSO4 0.32 0.47 4 59 400 471 73 3 18 2952 J9NKI1 Uncharacterized protein OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=FOXG_15708 PE=4 SV=1
## ALIGNMENTS 1 - 47
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 -1 P G 0 0 74 2 53 A
2 0 P S + 0 0 34 2 73 A
3 1 P M S > S+ 0 0 59 11 14 MMMMMMM M M V
4 2 P A T 3 S+ 0 0 61 14 68 AEEEDEE E AAP SV
5 3 P D T 3 S+ 0 0 99 14 72 DDDDTAA A AAV RT
6 4 P T < + 0 0 56 20 88 TFSFQHH S TTTTT P PPG KA
7 5 P R + 0 0 184 42 65 RRRRRRRRK R RSSSSS L RRMMMMMMMMRMMMMMMMMMMKRM
8 6 P R + 0 0 195 45 28 RRRRRRRRRRR RRRRRRRR RQQRRRRRRRRRKRKKKKRKKKRSK
9 7 P R + 0 0 153 46 16 RRRRRRRRRRRRRKKKKKKR RRRRRRRRRRRRRRRRRRRRRRQKR
10 8 P Q S S- 0 0 145 46 46 QQQQQQQQQQQQQQQQQQQQ QTTQQQQQQQQQQQTSSQQTTTTVT
11 9 P N S S- 0 0 38 46 62 NLLLHHHNNNHHHNNNNNNH NAANNNNNNNNHQNQHHQNQQQKSQ
12 10 P H - 0 0 85 46 78 HHHHHHHRRHRYRRRRRRRR HIIHRRRRRRRSYHYYYYRYYYLRY
13 11 P S - 0 0 26 46 43 SSSSSSSSSSSSSCCCCCCS SAASSSSSSSSSASAAAASAAAAAA
14 12 P C >> - 0 0 0 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
15 13 P D H 3> S+ 0 0 37 48 10 DDDDDDDDDDDDDDDDDDDDDDDRRDDDDDDDDDDDDDDDDDDDDDD
16 14 P P H 3> S+ 0 0 9 48 52 PPPPPPPQHQQQQQQQQQQQCCHYYQQQQQQQQQQQQQQQQQQQQSQ
17 15 P C H <>>S+ 0 0 0 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 16 P R H <5S+ 0 0 91 48 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
19 17 P K H <5S+ 0 0 140 47 24 KKK.KKKKSRKRKKKKKKKKSSKRRKKKKKKKKKKKKRRKKKKKRKK
20 18 P G H <5S- 0 0 39 47 54 GGG.GGGGGSGSGGGGGGGGAASRRAAAAAAAAASASSSSASSSSKS
21 19 P K T <5 + 0 0 185 47 0 KKK.KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
22 20 P R < - 0 0 106 48 21 RRRKRRRRRRRRRRRRRRRRRRKIIRRRRRRRRRRRRRRRRRRRRVR
23 21 P R - 0 0 143 48 47 RGGGAAAARGAAAAAAAAAAAAARRAAAAAAAAAGAGGGGAGGGARG
24 22 P C - 0 0 3 48 6 CCCKCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
25 23 P D S S+ 0 0 87 47 9 DDDRDDDDDDDDDDDDDDDDDDD.SDDDDDDDDDDDDDDDDDDDDDD
26 24 P A - 0 0 0 47 23 AAAGAAAaVAaAaaaaaaagLLg.GaaaaaaaaaaaaaaaaaaaaAa
27 25 P P > - 0 0 44 46 73 PPPCPPPsRPaPaeeeeedlPPp.Farssssssqplpagprpppp.p
28 26 P E T 3 S+ 0 0 123 46 80 EKKDAAAAYSDQDDDDDDTALLA.ERLEEEEEEREARSNELRGRD.R
29 27 P N T 3> + 0 0 73 46 82 NEDARRRSKLELETTTTTNHSSV.NRRRRRRRRSDDNSNDRNNNH.N
30 28 P R H <> S+ 0 0 8 46 86 RRRPRRRVPELELLLLLLKKTTS.SGNLLLLLLIMSMARMNMMMD.M
31 29 P N H > S+ 0 0 55 47 87 NQQKDDDSGAEVELLLLLPPIIPSQSGRRRRRRNDDDSVDGDDDS.D
32 30 P E H > S+ 0 0 109 47 85 ETKERRRSDGRPREEEEECSIIDGDVANNNNNNHPKPNNPSPPPF.P
33 31 P A H < S+ 0 0 14 47 84 ASSRDHHSPQSASTTTTTGSSSAFGPDGGSGGGSISLNGIELLLS.L
34 32 P N H >< S+ 0 0 69 47 80 NATQRAATSRSHSSSSSSHQNNTEREGGGGGGGNRDRRDRSRRRN.R
35 33 P E H 3< S+ 0 0 124 48 80 EFFTHDDSPSNLNRRRRRPPNNSSCSAddddddgDaDVDDADDDGeD
36 34 P N T 3< S- 0 0 121 42 76 NSSSTAANPSTNTTTTTTTPLLPSNWNssssssp.l.NSGS...Tn.
37 35 P G < + 0 0 55 48 56 GSTAggggPnagagggggvpPPtQNrgggggggqggggvkggggitg
38 36 P W - 0 0 62 44 92 W..Ftnna.sntnllllllpLLlD.yaaaaaaavsyshhsassslvs
39 37 P V - 0 0 100 44 93 V..SIIIG.FHKHAAAAATDSSKG.RLLLLLLLTSRSKKSLSSSQKS
40 38 P S - 0 0 28 45 65 S..STPPPPKSQSSSSSSAPPPSR.SRRRRRRRRPPPSSPRPPPPIP
41 39 P C > - 0 0 2 47 0 CCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCCC
42 40 P S H > S+ 0 0 43 47 15 SSSSSSSSSSSSSGGGGGSSSSSS.SSSSSSSSTSSSSSSSSSSSSS
43 41 P N H > S+ 0 0 0 47 64 NNNNNNNNNYNYNNNNNNNNMMYN.YYYYYYYYNYYYYYYYYYYYNY
44 42 P C H 4>S+ 0 0 1 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
45 43 P K H ><5S+ 0 0 112 48 90 KTTTRRRRKNRRREEEEEDKKKIVILLLLLLLLQILTAAILTTTTVT
46 44 P R H 3<5S+ 0 0 143 48 34 RRRRKKKRKKKRKKKKKKKKLLRRRKRRRRRRRRKKKKKKRKKKKKK
47 45 P W T 3<5S- 0 0 134 48 71 WWWWYYYWWTYTYTTTTTTWRRTFFTTTTTTTTATTTTTTTTTTTNT
48 46 P N T < 5 + 0 0 119 48 68 NKKKNNNRKNKGKKKKKKKEGGKNNNRRRRRRRGHSHNNHRHHHKNH
49 47 P K < - 0 0 109 48 28 KKKKRRRKKKRKRKKKKKKKTTKQQKKKKKKKKRKKKKKKKKKKKSK
50 48 P D - 0 0 74 48 72 DDEDEEEESTKTKTTTTTSTDDVEEHQQQQQQQTSHKTTSQKKKQDK
51 49 P C + 0 0 14 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
52 50 P T + 0 0 26 48 21 TTTTTTTTTTTTTTTTTTTTIISMMTTTTTTTTTTTTTTTTTTTTTT
53 51 P F S > S+ 0 0 15 48 36 FFFFFFFFVWFMFFFFFFFFVVLFFLFFFFFFFFMLMMMMFMMMMFM
54 52 P N H > S+ 0 0 72 48 59 NNNNNNNKEEDNDEEEEEDNIINTTDHHHHHHHDNNNNNNHNNNNSN
55 53 P W H > S+ 0 0 99 47 16 WWWWWWWWWWWWWWWWWWWWWW PPWWWWWWWWWWWWWWWWWWWWRW
56 54 P L H > S+ 0 0 2 46 66 LIIILLLLIAL LLLLLLLLRR VVAVVVVVVVLAAAAAAVAAAAVA
57 55 P S H <>S+ 0 0 70 45 69 SSSSSVVHKKL LRRRRRR AA SSRRRRRRRREWRWWWWRWWWWPW
58 56 P S H <5S+ 0 0 71 45 56 SSSSEEESAAS SSSSSSS SS SSSAAAAAAASTSTSSTATTTSLT
59 57 P Q H <5S+ 0 0 106 44 38 QKKKNNNVRQH HQQQQQQ KK QQQQQQQQQQ QQQQQQQQQQQKQ
60 58 P R T <5S- 0 0 97 21 37 RRRRRRRQE K KRRRRRR QQ R
61 59 P S T 5S+ 0 0 70 21 79 SAVAAAATQ E EVVVVVV SS G
62 60 P K < + 0 0 61 21 66 KDDDAAAKN S SSSSSSS SS P
63 61 P N - 0 0 61 21 80 ASSSAAASP R RQQQQQQ RR S
64 62 P S 0 0 38 21 83 KRRRRRRAP H HAAAAAA NN K
65 63 P S 0 0 100 19 48 GSGSGAA A A ASSSSS AA G
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
165535 P 0 0 0 0 0 0 0 50 50 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.47
2 0 P 0 0 0 0 0 0 0 0 50 0 50 0 0 0 0 0 0 0 0 0 2 0 0 0.693 23 0.27
3 1 P 9 0 0 91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.305 10 0.86
4 2 P 7 0 0 0 0 0 0 0 29 7 7 0 0 0 0 0 0 43 0 7 14 0 0 1.475 49 0.32
5 3 P 7 0 0 0 0 0 0 0 36 0 0 14 0 0 7 0 0 0 0 36 14 0 0 1.390 46 0.27
6 4 P 0 0 0 0 10 0 0 5 5 15 10 35 0 10 0 5 5 0 0 0 20 0 0 1.942 64 0.12
7 5 P 0 2 0 45 0 0 0 0 0 0 12 0 0 0 36 5 0 0 0 0 42 0 0 1.214 40 0.35
8 6 P 0 0 0 0 0 0 0 0 0 0 2 0 0 0 73 20 4 0 0 0 45 0 0 0.772 25 0.72
9 7 P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 83 15 2 0 0 0 46 0 0 0.528 17 0.83
10 8 P 2 0 0 0 0 0 0 0 0 0 4 17 0 0 0 0 76 0 0 0 46 0 0 0.732 24 0.53
11 9 P 0 7 0 0 0 0 0 0 4 0 2 0 0 22 0 2 15 0 48 0 46 0 0 1.452 48 0.38
12 10 P 0 2 4 0 0 0 22 0 0 0 2 0 0 26 43 0 0 0 0 0 46 0 0 1.347 44 0.22
13 11 P 0 0 0 0 0 0 0 0 28 0 59 0 13 0 0 0 0 0 0 0 46 0 0 0.936 31 0.56
14 12 P 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
15 13 P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 96 48 0 0 0.173 5 0.90
16 14 P 0 0 0 0 0 0 4 0 0 17 2 0 4 4 0 0 69 0 0 0 48 0 0 1.034 34 0.47
17 15 P 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
18 16 P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 48 1 0 0.000 0 1.00
19 17 P 0 0 0 0 0 0 0 0 0 0 6 0 0 0 15 79 0 0 0 0 47 0 0 0.648 21 0.76
20 18 P 0 0 0 0 0 0 0 38 28 0 28 0 0 0 4 2 0 0 0 0 47 0 0 1.295 43 0.45
21 19 P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 47 0 0 0.000 0 1.00
22 20 P 2 0 4 0 0 0 0 0 0 0 0 0 0 0 90 4 0 0 0 0 48 0 0 0.444 14 0.79
23 21 P 0 0 0 0 0 0 0 27 60 0 0 0 0 0 13 0 0 0 0 0 48 0 0 0.918 30 0.52
24 22 P 0 0 0 0 0 0 0 0 0 0 0 0 98 0 0 2 0 0 0 0 48 1 0 0.101 3 0.94
25 23 P 0 0 0 0 0 0 0 0 0 0 2 0 0 0 2 0 0 0 0 96 47 0 0 0.205 6 0.91
26 24 P 2 4 0 0 0 0 0 9 85 0 0 0 0 0 0 0 0 0 0 0 47 1 32 0.563 18 0.77
27 25 P 0 4 0 0 2 0 0 2 9 43 15 0 2 0 7 0 2 11 0 2 46 0 0 1.833 61 0.26
28 26 P 0 9 0 0 0 0 2 2 15 0 4 2 0 0 13 4 2 24 2 20 46 0 0 2.115 70 0.20
29 27 P 2 4 0 0 0 0 0 0 2 0 11 11 0 4 26 2 0 7 22 9 46 0 0 2.077 69 0.18
30 28 P 2 28 2 15 0 0 0 2 2 4 7 4 0 0 17 4 0 4 4 2 46 0 0 2.224 74 0.14
31 29 P 4 11 4 0 0 0 0 6 2 6 11 0 0 0 13 2 6 4 6 23 47 0 0 2.349 78 0.12
32 30 P 2 0 4 0 2 0 0 4 2 17 6 2 2 2 11 4 0 17 17 6 47 0 0 2.388 79 0.14
33 31 P 0 11 4 0 2 0 0 17 9 4 26 11 0 4 2 0 2 2 2 4 47 0 0 2.283 76 0.15
34 32 P 0 0 0 0 0 0 0 15 6 0 19 6 0 4 23 0 4 4 13 4 47 0 0 2.091 69 0.20
35 33 P 2 2 0 0 4 0 0 4 6 6 10 2 2 2 10 0 0 6 8 33 48 6 9 2.232 74 0.19
36 34 P 0 7 0 0 0 2 0 2 5 10 31 24 0 0 0 0 0 0 19 0 42 0 0 1.756 58 0.24
37 35 P 4 0 2 0 0 0 0 58 6 8 2 6 0 0 2 2 4 0 4 0 48 4 38 1.588 53 0.44
38 36 P 5 23 0 0 2 5 5 0 20 2 18 5 0 5 0 0 0 0 9 2 44 0 0 2.150 71 0.08
39 37 P 5 18 7 0 2 0 0 5 11 0 23 5 0 5 5 11 2 0 0 2 44 0 0 2.285 76 0.07
40 38 P 0 0 2 0 0 0 0 0 2 36 31 2 0 0 22 2 2 0 0 0 45 0 0 1.488 49 0.34
41 39 P 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 47 0 0 0.000 0 1.00
42 40 P 0 0 0 0 0 0 0 11 0 0 87 2 0 0 0 0 0 0 0 0 47 0 0 0.439 14 0.84
43 41 P 0 0 0 4 0 0 49 0 0 0 0 0 0 0 0 0 0 0 47 0 47 0 0 0.839 28 0.35
44 42 P 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
45 43 P 4 21 8 0 0 0 0 0 4 0 0 19 0 0 15 13 2 10 2 2 48 0 0 2.131 71 0.10
46 44 P 0 4 0 0 0 0 0 0 0 0 0 0 0 0 40 56 0 0 0 0 48 0 0 0.823 27 0.66
47 45 P 0 0 0 0 4 17 10 0 2 0 0 60 0 0 4 0 0 0 2 0 48 0 0 1.265 42 0.29
48 46 P 0 0 0 0 0 0 0 8 0 0 2 0 0 15 19 29 0 2 25 0 48 0 0 1.669 55 0.32
49 47 P 0 0 0 0 0 0 0 0 0 0 2 4 0 0 13 77 4 0 0 0 48 0 0 0.806 26 0.71
50 48 P 2 0 0 0 0 0 0 0 0 0 8 23 0 4 0 15 19 15 0 15 48 0 0 1.914 63 0.27
51 49 P 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
52 50 P 0 0 4 4 0 0 0 0 0 0 2 90 0 0 0 0 0 0 0 0 48 0 0 0.444 14 0.79
53 51 P 6 6 0 23 63 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 1.059 35 0.64
54 52 P 0 0 4 0 0 0 0 0 0 0 2 4 0 17 0 2 0 15 46 10 48 0 0 1.599 53 0.40
55 53 P 0 0 0 0 0 94 0 0 0 4 0 0 0 0 2 0 0 0 0 0 47 0 0 0.278 9 0.84
56 54 P 24 35 9 0 0 0 0 0 28 0 0 0 0 0 4 0 0 0 0 0 46 0 0 1.415 47 0.33
57 55 P 4 4 0 0 0 22 0 0 4 2 18 0 0 2 36 4 0 2 0 0 45 0 0 1.816 60 0.31
58 56 P 0 2 0 0 0 0 0 0 22 0 53 16 0 0 0 0 0 7 0 0 45 0 0 1.224 40 0.44
59 57 P 2 0 0 0 0 0 0 0 0 0 0 0 0 5 2 14 70 0 7 0 44 0 0 1.014 33 0.61
60 58 P 0 0 0 0 0 0 0 0 0 0 0 0 0 0 71 10 14 5 0 0 21 0 0 0.887 29 0.62
61 59 P 33 0 0 0 0 0 0 5 24 0 19 5 0 0 0 0 5 10 0 0 21 0 0 1.683 56 0.20
62 60 P 0 0 0 0 0 0 0 0 14 5 48 0 0 0 0 14 0 0 5 14 21 0 0 1.477 49 0.33
63 61 P 0 0 0 0 0 0 0 0 19 5 24 0 0 0 19 0 29 0 5 0 21 0 0 1.621 54 0.19
64 62 P 0 0 0 0 0 0 0 0 33 5 5 0 0 10 29 10 0 0 10 0 21 0 0 1.686 56 0.17
65 63 P 0 0 0 0 0 0 0 21 37 0 42 0 0 0 0 0 0 0 0 0 19 0 0 1.060 35 0.52
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
5 36 36 11 gEVSSSNQASSDt
6 36 36 10 gSRRVLAESNLn
7 36 36 10 gSRRVLAESNLn
8 21 57 6 aAIVGKTs
8 32 74 8 gSPETAIPAa
10 31 32 9 nLWQLNNGNSs
11 21 24 2 aLLa
11 32 37 5 aARQAYn
12 30 32 14 gHAASILSGNLPAPEt
13 21 24 2 aLLa
13 32 37 5 aARQAYn
14 22 54 3 aAILe
14 33 68 14 gASPTVFHYSDVYGPl
15 22 54 3 aAILe
15 33 68 14 gASPTVFHYSDVYGPl
16 22 54 3 aAILe
16 33 68 14 gASPTVFHYSDVYGPl
17 22 54 3 aAILe
17 33 68 14 gASPTVFHYSDVYGPl
18 22 54 3 aAILe
18 33 68 14 gASPTVFHYSDVYGPl
19 20 54 8 aAILEDTLLd
19 31 73 9 vFHYSDVFGPl
20 25 25 6 gKAPDDIl
20 36 42 14 pGLNAAGHGELDIRAp
23 20 26 6 gYIRNEKp
23 31 43 12 tSGSQIYGGSEPGl
26 25 25 6 aPSLREAa
26 36 42 14 rSDSDNNDFLPGEFEy
27 21 21 11 aPSLWDIQRNSEr
27 32 43 14 gVSLAEEHLDEIDSRa
28 21 21 9 aPSLWDIQRNs
28 30 39 2 dSTs
28 32 43 14 gTSLAEEHLDEIDSRa
29 21 21 9 aPSLWDIQRNs
29 30 39 2 dSTs
29 32 43 14 gTSLAEEHIDEIDSRa
30 21 21 9 aPSLWDIQRNs
30 30 39 2 dSTs
30 32 43 14 gTSLAEEHLDEIDSRa
31 21 21 9 aPSLWDIQRNs
31 30 39 2 dSTs
31 32 43 14 gTSLAEEHLDEIDSRa
32 21 21 9 aPSLWDIQRNs
32 30 39 2 dSTs
32 32 43 14 gTSLAEEHLDEIDSRa
33 21 21 9 aPSLWDIQRNs
33 30 39 2 dSTs
33 32 43 14 gTSLAEEHLDEIDSRa
34 21 34 11 aAFKSEHQHQHHq
34 30 54 3 gKTTp
34 32 59 14 qRRLAHHHQDKLQVPv
35 21 21 5 aPPLEYp
35 31 36 12 gKLIVGEKPPLVQs
36 21 21 11 aPSLRESVRRSLl
36 30 41 1 aLl
36 32 44 14 gRDSNANGASIPETEy
37 21 21 5 aPPLEIp
37 31 36 12 gKMIVGEKPPLAQs
38 21 21 6 aPPLLGPa
38 32 38 14 gDYSVSSPASASEGGh
39 21 21 10 aPPLLGPASSAg
39 32 42 10 vSSPASASESDh
40 21 21 5 aPPLEYp
40 32 37 11 kLIVGEKPPLVQs
41 21 21 11 aPSLWDIQRNSEr
41 32 43 14 gASLAEEHFDEIDSRa
42 21 21 5 aPPLEIp
42 31 36 12 gKMIVGEKPPLAQs
43 21 21 5 aPPLEIp
43 31 36 12 gKMIVGEKPPLAQs
44 21 21 5 aPPLEIp
44 31 36 12 gKMIVGEKPPLAQs
45 21 22 5 aPPLELp
45 32 38 11 iVLGKRPASETEl
46 28 111 2 eLNn
46 30 115 4 tLQTVv
47 24 423 5 aPPLEIp
47 34 438 12 gKMIVGEKPPLAQs
//