Complet list of 1f4s hssp fileClick here to see the 3D structure Complete list of 1f4s.hssp file
HSSP       HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID      1F4S
THRESHOLD  according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE  Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT    Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman 
DATE       file generated on 2014-04-28
HEADER     TRANSCRIPTION/DNA                       09-JUN-00   1F4S
COMPND     MOL_ID: 1; MOLECULE: DNA (5'-D(P*CP*GP*TP*GP*CP*GP*GP*AP*TP*C)-3'); CH
SOURCE     MOL_ID: 1; SYNTHETIC: YES; MOL_ID: 2; SYNTHETIC: YES; MOL_ID: 3; ORGAN
AUTHOR     B.CAHUZAC,R.CERDAN,B.FELENBOK,E.GUITTET
DBREF      1F4S P    3    62  UNP    P21228   ALCR_EMENI       1     60
DBREF      1F4S A    1    10  PDB    1F4S     1F4S             1     10
DBREF      1F4S B    1    10  PDB    1F4S     1F4S             1     10
SEQLENGTH    65
NCHAIN        1 chain(s) in 1F4S data set
NALIGN       47
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM):  (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e.  entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight

## PROTEINS : identifier and alignment statistics
  NR.    ID         STRID   %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM     PROTEIN
    1 : ALCR_EMENI          0.95  0.97    3   65    1   63   63    0    0  821  P21228     Regulatory protein alcR OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=alcR PE=1 SV=2
    2 : K9H238_PEND1        0.62  0.78    3   65    1   60   63    1    3  806  K9H238     Regulatory protein alcR OS=Penicillium digitatum (strain Pd1 / CECT 20795) GN=PDIP_11210 PE=4 SV=1
    3 : W6Q4H2_PENRO        0.59  0.76    3   65    1   60   63    1    3  800  W6Q4H2     Regulatory protein alcR OS=Penicillium roqueforti GN=alcR PE=4 SV=1
    4 : K9GCT0_PEND2        0.51  0.70    3   65    1   60   63    1    3  806  K9GCT0     Regulatory protein alcR OS=Penicillium digitatum (strain PHI26 / CECT 20796) GN=PDIG_06570 PE=4 SV=1
    5 : A1CA83_ASPCL        0.47  0.64    3   65    1   74   74    1   11 1308  A1CA83     C6 zinc finger domain protein OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=ACLA_010770 PE=4 SV=1
    6 : B0Y3Q7_ASPFC        0.47  0.63    3   65    1   73   73    1   10  866  B0Y3Q7     C6 transcription factor AlcR OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=AFUB_055060 PE=4 SV=1
    7 : Q4WU81_ASPFU        0.47  0.63    3   65    1   73   73    1   10  866  Q4WU81     C6 transcription factor AlcR OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=AFUA_5G07510 PE=4 SV=1
    8 : V5FVH6_BYSSN        0.46  0.64    7   64   37  108   72    2   14  957  V5FVH6     C6 zinc finger domain protein OS=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) GN=PVAR5_4717 PE=4 SV=1
    9 : M3B3C6_MYCFI        0.42  0.70    6   65    1   58   60    1    2  773  M3B3C6     Uncharacterized protein (Fragment) OS=Mycosphaerella fijiensis (strain CIRAD86) GN=MYCFIDRAFT_96039 PE=4 SV=1
   10 : G0RF11_HYPJQ        0.41  0.52    8   59    2   62   61    1    9  773  G0RF11     Predicted protein OS=Hypocrea jecorina (strain QM6a) GN=TRIREDRAFT_105269 PE=4 SV=1
   11 : I8TPH2_ASPO3        0.41  0.68    7   65    4   69   66    2    7  826  I8TPH2     Uncharacterized protein OS=Aspergillus oryzae (strain 3.042) GN=Ao3042_07751 PE=4 SV=1
   12 : L7I297_MAGOY        0.41  0.51    9   55    3   63   61    1   14  702  L7I297     Regulatory protein alcR (Fragment) OS=Magnaporthe oryzae (strain Y34) GN=OOU_Y34scaffold00606g1 PE=4 SV=1
   13 : Q2UDT6_ASPOR        0.41  0.68    7   65    4   69   66    2    7  826  Q2UDT6     Predicted protein OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=AO090012000035 PE=4 SV=1
   14 : M2SSG1_COCSN        0.40  0.55    6   65   33  109   77    2   17  931  M2SSG1     Uncharacterized protein OS=Cochliobolus sativus (strain ND90Pr / ATCC 201652) GN=COCSADRAFT_181150 PE=4 SV=1
   15 : N4WRU9_COCH4        0.40  0.55    6   65   33  109   77    2   17  913  N4WRU9     Uncharacterized protein OS=Cochliobolus heterostrophus (strain C4 / ATCC 48331 / race T) GN=COCC4DRAFT_51704 PE=4 SV=1
   16 : W6XXZ5_COCCA        0.40  0.55    6   65   33  109   77    2   17  913  W6XXZ5     Uncharacterized protein OS=Bipolaris zeicola 26-R-13 GN=COCCADRAFT_7380 PE=4 SV=1
   17 : W6Z947_COCMI        0.40  0.55    6   65   33  109   77    2   17  937  W6Z947     Uncharacterized protein OS=Bipolaris oryzae ATCC 44560 GN=COCMIDRAFT_4668 PE=4 SV=1
   18 : W7ERS0_COCVI        0.40  0.55    6   65   33  109   77    2   17  913  W7ERS0     Uncharacterized protein OS=Bipolaris victoriae FI3 GN=COCVIDRAFT_26958 PE=4 SV=1
   19 : E4ZYL9_LEPMJ        0.38  0.53    8   64   35  108   74    2   17  909  E4ZYL9     Putative uncharacterized protein OS=Leptosphaeria maculans (strain JN3 / isolate v23.1.3 / race Av1-4-5-6-7-8) GN=LEMA_P108100.1 PE=4 SV=1
   20 : V5HYH2_BYSSN        0.38  0.51    3   56    1   74   74    2   20  966  V5HYH2     C6 zinc finger domain protein OS=Byssochlamys spectabilis (strain No. 5 / NBRC 109023) GN=PVAR5_3660 PE=4 SV=1
   21 : B6HLT5_PENCW        0.37  0.58   14   65   29   80   52    0    0  154  B6HLT5     Pc21g21320 protein OS=Penicillium chrysogenum (strain ATCC 28089 / DSM 1075 / Wisconsin 54-1255) GN=Pc21g21320 PE=4 SV=1
   22 : Q3HUR7_PENCH        0.37  0.58   14   65   29   80   52    0    0  154  Q3HUR7     Putative uncharacterized protein OS=Penicillium chrysogenum PE=2 SV=1
   23 : S0EJ52_GIBF5        0.37  0.48    8   54    7   71   65    2   18  878  S0EJ52     Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_09271 PE=4 SV=1
   24 : C1GKT2_PARBD        0.36  0.52    4   59   47   96   56    1    6  156  C1GKT2     Uncharacterized protein OS=Paracoccidioides brasiliensis (strain Pb18) GN=PADG_07939 PE=4 SV=1
   25 : Q0CGH3_ASPTN        0.36  0.54    4   59   44   93   56    1    6  298  Q0CGH3     Predicted protein OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=ATEG_07219 PE=4 SV=1
   26 : S3BYJ6_OPHP1        0.36  0.49    3   59    1   77   77    2   20 1026  S3BYJ6     Uncharacterized protein OS=Ophiostoma piceae (strain UAMH 11346) GN=F503_03618 PE=4 SV=1
   27 : C7Z9E1_NECH7        0.35  0.44    7   59    1   78   78    2   25  906  C7Z9E1     Predicted protein OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=NECHADRAFT_100913 PE=4 SV=1
   28 : F9G2N7_FUSOF        0.35  0.50    7   59    1   78   78    3   25  921  F9G2N7     Uncharacterized protein OS=Fusarium oxysporum (strain Fo5176) GN=FOXB_12919 PE=4 SV=1
   29 : J9N541_FUSO4        0.35  0.50    7   59    1   78   78    3   25  921  J9N541     Uncharacterized protein OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=FOXG_10302 PE=4 SV=1
   30 : N1RZV4_FUSC4        0.35  0.50    7   59    1   78   78    3   25  920  N1RZV4     Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 4) GN=FOC4_g10009416 PE=4 SV=1
   31 : N4TTV5_FUSC1        0.35  0.50    7   59    1   78   78    3   25  921  N4TTV5     Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 1) GN=FOC1_g10008310 PE=4 SV=1
   32 : S0E228_GIBF5        0.35  0.50    7   59    1   78   78    3   25  930  S0E228     Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_07661 PE=4 SV=1
   33 : W7MP93_GIBM7        0.35  0.50    7   59    1   78   78    3   25  924  W7MP93     Uncharacterized protein OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=FVEG_08953 PE=4 SV=1
   34 : H6C1L0_EXODN        0.34  0.45    7   58   14   93   80    3   28  925  H6C1L0     Putative uncharacterized protein OS=Exophiala dermatitidis (strain ATCC 34100 / CBS 525.76 / NIH/UT8656) GN=HMPREF1120_06608 PE=4 SV=1
   35 : I1RGK4_GIBZE        0.34  0.50    7   59    1   69   70    3   18  829  I1RGK4     Uncharacterized protein OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FG02874.1 PE=4 SV=1
   36 : U7PU59_SPOS1        0.34  0.47    7   59    1   79   79    3   26 1052  U7PU59     Uncharacterized protein OS=Sporothrix schenckii (strain ATCC 58251 / de Perez 2211183) GN=HMPREF1624_05078 PE=4 SV=1
   37 : F9F9S3_FUSOF        0.33  0.47    7   59    1   69   70    3   18  833  F9F9S3     Uncharacterized protein OS=Fusarium oxysporum (strain Fo5176) GN=FOXB_03148 PE=4 SV=1
   38 : I1RTH7_GIBZE        0.33  0.47    7   59    1   73   73    2   20  845  I1RTH7     Uncharacterized protein OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FG07482.1 PE=4 SV=1
   39 : K3V9R3_FUSPC        0.33  0.49    7   59    1   73   73    2   20  845  K3V9R3     Uncharacterized protein OS=Fusarium pseudograminearum (strain CS3096) GN=FPSE_09446 PE=4 SV=1
   40 : K3VI46_FUSPC        0.33  0.49    7   59    1   69   69    2   16  824  K3VI46     ZBC1 OS=Fusarium pseudograminearum (strain CS3096) GN=ZBC1 PE=4 SV=1
   41 : K3VXN7_FUSPC        0.33  0.45    7   59    1   78   78    2   25  920  K3VXN7     Uncharacterized protein OS=Fusarium pseudograminearum (strain CS3096) GN=FPSE_10603 PE=4 SV=1
   42 : N1S826_FUSC4        0.33  0.47    7   59    1   69   70    3   18  826  N1S826     Regulatory protein alcR OS=Fusarium oxysporum f. sp. cubense (strain race 4) GN=FOC4_g10002820 PE=4 SV=1
   43 : S0E4E5_GIBF5        0.33  0.47    7   59    1   69   70    3   18  833  S0E4E5     Related to regulatory protein alcR OS=Gibberella fujikuroi (strain CBS 195.34 / IMI 58289 / NRRL A-6831) GN=FFUJ_05511 PE=4 SV=1
   44 : W7N4X0_GIBM7        0.33  0.47    7   59    1   69   70    3   18  835  W7N4X0     Uncharacterized protein OS=Gibberella moniliformis (strain M3125 / FGSC 7600) GN=FVEG_13171 PE=4 SV=1
   45 : C7ZD87_NECH7        0.32  0.52    7   59    2   70   69    2   16  797  C7ZD87     Putative uncharacterized protein OS=Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) GN=NECHADRAFT_105211 PE=4 SV=1
   46 : G8XZQ9_PICSO        0.32  0.58    1   65   84  146   71    3   14  974  G8XZQ9     Piso0_005711 protein OS=Pichia sorbitophila (strain ATCC MYA-4447 / BCRC 22081 / CBS 7064 / NBRC 10061 / NRRL Y-12695) GN=Piso0_005711 PE=4 SV=1
   47 : J9NKI1_FUSO4        0.32  0.47    4   59  400  471   73    3   18 2952  J9NKI1     Uncharacterized protein OS=Fusarium oxysporum f. sp. lycopersici (strain 4287 / CBS 123668 / FGSC 9935 / NRRL 34936) GN=FOXG_15708 PE=4 SV=1
## ALIGNMENTS    1 -   47
 SeqNo  PDBNo AA STRUCTURE BP1 BP2  ACC NOCC  VAR  ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
     1   -1 P G              0   0   98    2   53                                               A 
     2    0 P S        +     0   0  125    2   73                                               A 
     3    1 P M  S  > S+     0   0   92   11   14  MMMMMMM            M     M                   V 
     4    2 P A  T  4 S+     0   0   34   14   68  AEEEDEE            E   AAP                   SV
     5    3 P D  T  4 S+     0   0  146   14   72  DDDDTAA            A   AAV                   RT
     6    4 P T  T  4 S-     0   0   83   20   88  TFSFQHH S    TTTTT P   PPG                   KA
     7    5 P R  S  < S+     0   0  184   42   65  RRRRRRRRK R RSSSSS L   RRMMMMMMMMRMMMMMMMMMMKRM
     8    6 P R        +     0   0  171   45   28  RRRRRRRRRRR RRRRRRRR  RQQRRRRRRRRRKRKKKKRKKKRSK
     9    7 P R        +     0   0  174   46   16  RRRRRRRRRRRRRKKKKKKR  RRRRRRRRRRRRRRRRRRRRRRQKR
    10    8 P Q  S    S-     0   0  174   46   46  QQQQQQQQQQQQQQQQQQQQ  QTTQQQQQQQQQQQTSSQQTTTTVT
    11    9 P N  S    S-     0   0   44   46   62  NLLLHHHNNNHHHNNNNNNH  NAANNNNNNNNHQNQHHQNQQQKSQ
    12   10 P H        -     0   0   57   46   78  HHHHHHHRRHRYRRRRRRRR  HIIHRRRRRRRSYHYYYYRYYYLRY
    13   11 P S        -     0   0   17   46   43  SSSSSSSSSSSSSCCCCCCS  SAASSSSSSSSSASAAAASAAAAAA
    14   12 P C    >>  -     0   0    0   48    0  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    15   13 P D  H 3> S+     0   0   58   48   10  DDDDDDDDDDDDDDDDDDDDDDDRRDDDDDDDDDDDDDDDDDDDDDD
    16   14 P P  H 3> S+     0   0   11   48   52  PPPPPPPQHQQQQQQQQQQQCCHYYQQQQQQQQQQQQQQQQQQQQSQ
    17   15 P C  H <>>S+     0   0    2   48    0  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    18   16 P R  H  <5S+     0   0   94   48    0  RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
    19   17 P K  H  <5S+     0   0  148   47   24  KKK.KKKKSRKRKKKKKKKKSSKRRKKKKKKKKKKKKRRKKKKKRKK
    20   18 P G  H  <5S-     0   0   33   47   54  GGG.GGGGGSGSGGGGGGGGAASRRAAAAAAAAASASSSSASSSSKS
    21   19 P K  T  <5 +     0   0  186   47    0  KKK.KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
    22   20 P R      < -     0   0  112   48   21  RRRKRRRRRRRRRRRRRRRRRRKIIRRRRRRRRRRRRRRRRRRRRVR
    23   21 P R        +     0   0  177   48   47  RGGGAAAARGAAAAAAAAAAAAARRAAAAAAAAAGAGGGGAGGGARG
    24   22 P C        -     0   0   11   48    6  CCCKCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    25   23 P D  S    S+     0   0   85   47    9  DDDRDDDDDDDDDDDDDDDDDDD.SDDDDDDDDDDDDDDDDDDDDDD
    26   24 P A        +     0   0    0   47   23  AAAGAAAaVAaAaaaaaaagLLg.GaaaaaaaaaaaaaaaaaaaaAa
    27   25 P P    >   -     0   0   26   46   73  PPPCPPPsRPaPaeeeeedlPPp.Farssssssqplpagprpppp.p
    28   26 P E  T 3  S+     0   0  168   46   80  EKKDAAAAYSDQDDDDDDTALLA.ERLEEEEEEREARSNELRGRD.R
    29   27 P N  T 3>  +     0   0   79   46   82  NEDARRRSKLELETTTTTNHSSV.NRRRRRRRRSDDNSNDRNNNH.N
    30   28 P R  H <> S+     0   0    6   46   86  RRRPRRRVPELELLLLLLKKTTS.SGNLLLLLLIMSMARMNMMMD.M
    31   29 P N  H  > S+     0   0   70   47   87  NQQKDDDSGAEVELLLLLPPIIPSQSGRRRRRRNDDDSVDGDDDS.D
    32   30 P E  H  > S+     0   0  118   47   85  ETKERRRSDGRPREEEEECSIIDGDVANNNNNNHPKPNNPSPPPF.P
    33   31 P A  H  < S+     0   0    9   47   84  ASSRDHHSPQSASTTTTTGSSSAFGPDGGSGGGSISLNGIELLLS.L
    34   32 P N  H >< S+     0   0   76   47   80  NATQRAATSRSHSSSSSSHQNNTEREGGGGGGGNRDRRDRSRRRN.R
    35   33 P E  H 3< S+     0   0  153   48   80  EFFTHDDSPSNLNRRRRRPPNNSSCSAddddddgDaDVDDADDDGeD
    36   34 P N  T 3< S-     0   0  121   42   76  NSSSTAANPSTNTTTTTTTPLLPSNWNssssssp.l.NSGS...Tn.
    37   35 P G    <   +     0   0   51   48   56  GSTAggggPnagagggggvpPPtQNrgggggggqggggvkggggitg
    38   36 P W        +     0   0   69   44   92  W..Ftnna.sntnllllllpLLlD.yaaaaaaavsyshhsassslvs
    39   37 P V        -     0   0   69   44   93  V..SIIIG.FHKHAAAAATDSSKG.RLLLLLLLTSRSKKSLSSSQKS
    40   38 P S        -     0   0   29   45   65  S..STPPPPKSQSSSSSSAPPPSR.SRRRRRRRRPPPSSPRPPPPIP
    41   39 P C     >  -     0   0    1   47    0  CCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCCC
    42   40 P S  H  > S+     0   0   41   47   15  SSSSSSSSSSSSSGGGGGSSSSSS.SSSSSSSSTSSSSSSSSSSSSS
    43   41 P N  H  > S+     0   0    2   47   64  NNNNNNNNNYNYNNNNNNNNMMYN.YYYYYYYYNYYYYYYYYYYYNY
    44   42 P C  H  4>S+     0   0    0   48    0  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    45   43 P K  H ><5S+     0   0  118   48   90  KTTTRRRRKNRRREEEEEDKKKIVILLLLLLLLQILTAAILTTTTVT
    46   44 P R  H 3<5S+     0   0  177   48   34  RRRRKKKRKKKRKKKKKKKKLLRRRKRRRRRRRRKKKKKKRKKKKKK
    47   45 P W  T 3<5S-     0   0  118   48   71  WWWWYYYWWTYTYTTTTTTWRRTFFTTTTTTTTATTTTTTTTTTTNT
    48   46 P N  T < 5 +     0   0  136   48   68  NKKKNNNRKNKGKKKKKKKEGGKNNNRRRRRRRGHSHNNHRHHHKNH
    49   47 P K      < -     0   0   84   48   28  KKKKRRRKKKRKRKKKKKKKTTKQQKKKKKKKKRKKKKKKKKKKKSK
    50   48 P D        -     0   0  107   48   72  DDEDEEEESTKTKTTTTTSTDDVEEHQQQQQQQTSHKTTSQKKKQDK
    51   49 P C        +     0   0   11   48    0  CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
    52   50 P T        +     0   0   21   48   21  TTTTTTTTTTTTTTTTTTTTIISMMTTTTTTTTTTTTTTTTTTTTTT
    53   51 P F  S  > S+     0   0    2   48   36  FFFFFFFFVWFMFFFFFFFFVVLFFLFFFFFFFFMLMMMMFMMMMFM
    54   52 P N  H  > S+     0   0   74   48   59  NNNNNNNKEEDNDEEEEEDNIINTTDHHHHHHHDNNNNNNHNNNNSN
    55   53 P W  H  > S+     0   0   66   47   16  WWWWWWWWWWWWWWWWWWWWWW PPWWWWWWWWWWWWWWWWWWWWRW
    56   54 P L  H >>>S+     0   0   17   46   66  LIIILLLLIAL LLLLLLLLRR VVAVVVVVVVLAAAAAAVAAAAVA
    57   55 P S  H 3<5S+     0   0   67   45   69  SSSSSVVHKKL LRRRRRR AA SSRRRRRRRREWRWWWWRWWWWPW
    58   56 P S  H 3<5S+     0   0   74   45   56  SSSSEEESAAS SSSSSSS SS SSSAAAAAAASTSTSSTATTTSLT
    59   57 P Q  H <<5S+     0   0   79   44   38  QKKKNNNVRQH HQQQQQQ KK QQQQQQQQQQ QQQQQQQQQQQKQ
    60   58 P R  T  <5S+     0   0   93   21   37  RRRRRRRQE K KRRRRRR QQ                       R 
    61   59 P S  S