Complet list of 1f22 hssp file
Complete list of 1f22.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1F22
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-28
HEADER ELECTRON TRANSPORT 23-MAY-00 1F22
COMPND MOL_ID: 1; MOLECULE: CYTOCHROME C7; CHAIN: A
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: DESULFUROMONAS ACETOXIDANS; ORGANISM_T
AUTHOR M.ASSFALG,L.BANCI,I.BERTINI,M.BRUSCHI,M.T.GIUDICI-ORTICONI
DBREF 1F22 A 1 68 UNP P00137 CYC3_DESAC 1 68
SEQLENGTH 68
NCHAIN 1 chain(s) in 1F22 data set
NALIGN 63
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CYC3_DESAC 1NEW 1.00 1.00 1 68 1 68 68 0 0 68 P00137 Cytochrome c3 OS=Desulfuromonas acetoxidans GN=cyd PE=1 SV=1
2 : B5EBF6_GEOBB 0.61 0.72 1 68 21 89 69 1 1 89 B5EBF6 Cytochrome c OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ppcG PE=4 SV=1
3 : E8WRV2_GEOS8 0.61 0.72 1 68 21 89 69 1 1 89 E8WRV2 Cytochrome c, class III, conserved region (Precursor) OS=Geobacter sp. (strain M18) GN=GM18_0642 PE=4 SV=1
4 : C6E5L8_GEOSM 0.59 0.74 1 68 21 89 69 1 1 89 C6E5L8 Uncharacterized protein (Precursor) OS=Geobacter sp. (strain M21) GN=GM21_3521 PE=4 SV=1
5 : Q1JVW5_DESAC 0.55 0.71 1 68 21 95 75 4 7 95 Q1JVW5 Cytochrome c3 (Precursor) OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_0229 PE=4 SV=1
6 : A5G8Z9_GEOUR 0.54 0.70 1 68 21 89 70 3 3 89 A5G8Z9 Uncharacterized protein (Precursor) OS=Geobacter uraniireducens (strain Rf4) GN=Gura_4124 PE=4 SV=1
7 : D7AHG1_GEOSK 0.54 0.61 3 68 24 92 69 3 3 92 D7AHG1 Cytochrome c, 3 heme-binding sites OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=ppcD PE=4 SV=1
8 : Q74ED8_GEOSL3H4N 0.54 0.61 3 68 24 92 69 3 3 92 Q74ED8 Cytochrome c OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ppcD PE=1 SV=1
9 : B9M0E4_GEODF 0.51 0.63 1 68 21 89 70 3 3 89 B9M0E4 Uncharacterized protein (Precursor) OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=Geob_0616 PE=4 SV=1
10 : A5G875_GEOUR 0.50 0.61 1 68 21 90 70 2 2 90 A5G875 Uncharacterized protein (Precursor) OS=Geobacter uraniireducens (strain Rf4) GN=Gura_3843 PE=4 SV=1
11 : B3E7F4_GEOLS 0.49 0.63 1 68 21 89 70 3 3 89 B3E7F4 Cytochrome c3 (Precursor) OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=Glov_2758 PE=4 SV=1
12 : B5EGC6_GEOBB 0.49 0.59 1 68 21 90 70 2 2 90 B5EGC6 Cytochrome c OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ppcB PE=4 SV=1
13 : B9M4R0_GEODF 0.49 0.60 1 68 21 90 70 2 2 90 B9M4R0 Uncharacterized protein (Precursor) OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=Geob_1426 PE=4 SV=1
14 : D7AEB1_GEOSK 0.48 0.61 1 68 21 91 71 3 3 91 D7AEB1 Cytochrome c, 3 heme-binding sites OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=ppcB PE=4 SV=1
15 : Q74G83_GEOSL3BXU 0.48 0.61 1 68 21 91 71 3 3 91 Q74G83 Cytochrome c OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ppcB PE=1 SV=1
16 : A5G8Z6_GEOUR 0.47 0.57 1 68 21 90 70 2 2 90 A5G8Z6 Uncharacterized protein (Precursor) OS=Geobacter uraniireducens (strain Rf4) GN=Gura_4121 PE=4 SV=1
17 : B9M0E7_GEODF 0.47 0.57 1 68 21 90 70 2 2 90 B9M0E7 Uncharacterized protein (Precursor) OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=Geob_0619 PE=4 SV=1
18 : C6E9Q4_GEOSM 0.47 0.57 1 68 21 90 70 2 2 90 C6E9Q4 Uncharacterized protein (Precursor) OS=Geobacter sp. (strain M21) GN=GM21_4139 PE=4 SV=1
19 : H1L905_GEOME 0.47 0.61 1 68 21 90 70 2 2 90 H1L905 Putative uncharacterized protein (Precursor) OS=Geobacter metallireducens RCH3 GN=GeomeDRAFT_2502 PE=4 SV=1
20 : Q39QU5_GEOMG 0.47 0.61 1 68 21 90 70 2 2 90 Q39QU5 Cytochrome c OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ppcB PE=4 SV=1
21 : E1PTF6_GEOSK 0.46 0.57 1 66 21 88 68 2 2 90 E1PTF6 Cytochrome c, 3 heme-binding sites OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=ppcE PE=4 SV=1
22 : E8WL09_GEOS8 0.46 0.57 1 68 21 90 70 2 2 90 E8WL09 Cytochrome c, class III, conserved region (Precursor) OS=Geobacter sp. (strain M18) GN=GM18_4510 PE=4 SV=1
23 : Q74CB4_GEOSL3H34 0.46 0.57 1 66 21 88 68 2 2 90 Q74CB4 Cytochrome c OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ppcE PE=1 SV=1
24 : B5EGC0_GEOBB 0.45 0.52 4 68 26 94 69 3 4 94 B5EGC0 Cytochrome c OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=ppcD PE=4 SV=1
25 : C6E9P9_GEOSM 0.45 0.52 4 68 26 94 69 3 4 94 C6E9P9 Cytochrome c3 (Precursor) OS=Geobacter sp. (strain M21) GN=GM21_4134 PE=4 SV=1
26 : CYC7_GEOMG 0.44 0.57 1 68 21 90 70 2 2 90 P81894 Cytochrome c7 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=Gmet_2902 PE=1 SV=2
27 : D7AFU0_GEOSK2LZZ 0.44 0.56 1 68 21 91 71 3 3 91 D7AFU0 Cytochrome c, 3 heme-binding sites OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=ppcA PE=1 SV=1
28 : E8WL03_GEOS8 0.44 0.55 2 68 24 94 71 3 4 94 E8WL03 Cytochrome c, class III, conserved region (Precursor) OS=Geobacter sp. (strain M18) GN=GM18_4504 PE=4 SV=1
29 : G5EBD6_GEOSL 0.44 0.56 1 68 21 91 71 3 3 91 G5EBD6 Cytochrome c OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ppcA PE=4 SV=1
30 : H1L611_GEOME 0.44 0.57 1 68 21 90 70 2 2 90 H1L611 Cytochrome c3 (Precursor) OS=Geobacter metallireducens RCH3 GN=GeomeDRAFT_1458 PE=4 SV=1
31 : Q8GGK7_GEOSN3SJ0 0.44 0.56 1 68 21 91 71 3 3 91 Q8GGK7 PpcA (Fragment) OS=Geobacter sulfurreducens GN=ppcA PE=1 SV=1
32 : H1L3M3_GEOME 0.43 0.59 1 68 21 90 70 2 2 90 H1L3M3 Cytochrome c3 (Precursor) OS=Geobacter metallireducens RCH3 GN=GeomeDRAFT_0620 PE=4 SV=1
33 : Q1K4C8_DESAC 0.43 0.60 1 68 155 222 68 0 0 222 Q1K4C8 Uncharacterized protein (Precursor) OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_3041 PE=4 SV=1
34 : Q39UJ9_GEOMG 0.43 0.59 1 68 21 90 70 2 2 90 Q39UJ9 Cytochrome c OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ppcE PE=4 SV=1
35 : A7HC65_ANADF 0.42 0.59 1 68 25 92 69 2 2 93 A7HC65 Cytochrome c class III OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2108 PE=4 SV=1
36 : B4UCY9_ANASK 0.42 0.58 1 68 24 94 71 3 3 95 B4UCY9 Cytochrome c3 (Precursor) OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_2159 PE=4 SV=1
37 : B8JA68_ANAD2 0.42 0.58 1 68 24 94 71 3 3 95 B8JA68 Cytochrome c3 (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_2249 PE=4 SV=1
38 : Q2III7_ANADE 0.42 0.58 1 68 24 94 71 3 3 95 Q2III7 Cytochrome c3 (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_1696 PE=4 SV=1
39 : Q1K0W0_DESAC 0.41 0.52 1 68 22 95 75 4 8 95 Q1K0W0 Cytochrome c3 (Precursor) OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_1712 PE=4 SV=1
40 : A7HC66_ANADF 0.40 0.59 1 68 23 91 70 3 3 92 A7HC66 Cytochrome c, class III OS=Anaeromyxobacter sp. (strain Fw109-5) GN=Anae109_2109 PE=4 SV=1
41 : B4UBF4_ANASK 0.40 0.57 1 66 50 118 70 5 5 338 B4UBF4 Uncharacterized protein (Precursor) OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_1988 PE=4 SV=1
42 : B8J8B5_ANAD2 0.40 0.57 1 66 50 118 70 5 5 338 B8J8B5 Uncharacterized protein (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_2073 PE=4 SV=1
43 : H1L4M3_GEOME 0.40 0.51 1 68 23 92 70 2 2 92 H1L4M3 Cytochrome c3 (Precursor) OS=Geobacter metallireducens RCH3 GN=GeomeDRAFT_0927 PE=4 SV=1
44 : Q2IJ34_ANADE 0.40 0.57 1 66 46 114 70 5 5 335 Q2IJ34 Uncharacterized protein (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_1891 PE=4 SV=1
45 : Q39YU6_GEOMG 0.40 0.51 1 68 23 92 70 2 2 92 Q39YU6 Cytochrome c OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ppcF PE=4 SV=1
46 : B4UCY8_ANASK 0.39 0.59 1 68 23 91 70 3 3 92 B4UCY8 Cytochrome c class III (Precursor) OS=Anaeromyxobacter sp. (strain K) GN=AnaeK_2158 PE=4 SV=1
47 : B8JA67_ANAD2 0.39 0.59 1 68 23 91 70 3 3 92 B8JA67 Cytochrome c class III (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=A2cp1_2248 PE=4 SV=1
48 : Q1K1X6_DESAC 0.39 0.51 2 68 52 121 72 4 7 121 Q1K1X6 Uncharacterized protein (Precursor) OS=Desulfuromonas acetoxidans DSM 684 GN=Dace_2758 PE=4 SV=1
49 : Q2IIJ4_ANADE 0.39 0.59 1 68 23 91 70 3 3 92 Q2IIJ4 Cytochrome c, class III (Precursor) OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=Adeh_1697 PE=4 SV=1
50 : B3EAB2_GEOLS 0.38 0.51 1 68 26 98 73 2 5 98 B3EAB2 Cytochrome c3 (Precursor) OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=Glov_0209 PE=4 SV=1
51 : D7AEB2_GEOSK 0.38 0.52 2 67 22 90 69 3 3 95 D7AEB2 Cytochrome c, 3 heme-binding sites OS=Geobacter sulfurreducens (strain DL-1 / KN400) GN=ppcC PE=4 SV=1
52 : Q74G82_GEOSL3H33 0.38 0.52 2 67 22 90 69 3 3 95 Q74G82 Cytochrome c OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=ppcC PE=1 SV=1
53 : A1AUT1_PELPD 0.37 0.54 1 68 21 91 71 3 3 91 A1AUT1 Cytochrome c3 (Precursor) OS=Pelobacter propionicus (strain DSM 2379) GN=Ppro_3509 PE=4 SV=1
54 : H1L904_GEOME 0.37 0.54 2 66 25 92 68 3 3 95 H1L904 Cytochrome c3 (Precursor) OS=Geobacter metallireducens RCH3 GN=GeomeDRAFT_2501 PE=4 SV=1
55 : Q39QU6_GEOMG 0.37 0.54 2 66 25 92 68 3 3 95 Q39QU6 Cytochrome c OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=ppcC PE=4 SV=1
56 : Q3A435_PELCD 0.37 0.60 1 66 34 98 67 3 3 101 Q3A435 Cytochrome c OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=ppcA PE=4 SV=2
57 : D4H3I1_DENA2 0.36 0.51 8 68 436 503 69 2 9 503 D4H3I1 Uncharacterized protein (Precursor) OS=Denitrovibrio acetiphilus (strain DSM 12809 / N2460) GN=Dacet_0467 PE=4 SV=1
58 : B9M783_GEODF 0.35 0.46 1 67 22 87 69 3 5 95 B9M783 Cytochrome c3 (Precursor) OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) GN=Geob_1813 PE=4 SV=1
59 : E8WHI0_GEOS8 0.35 0.46 1 66 22 93 72 3 6 96 E8WHI0 Cytochrome c, class III, conserved region (Precursor) OS=Geobacter sp. (strain M18) GN=GM18_1817 PE=4 SV=1
60 : Q3AFH8_CARHZ 0.34 0.47 2 67 110 171 68 3 8 459 Q3AFH8 Cyctochrome c, NapC/NirT family OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=CHY_0234 PE=4 SV=1
61 : B8FAX8_DESAA 0.32 0.38 1 68 34 118 85 6 17 119 B8FAX8 Cytochrome c7 (PpcA) (Precursor) OS=Desulfatibacillum alkenivorans (strain AK-01) GN=Dalk_2371 PE=4 SV=1
62 : E1YB88_9DELT 0.32 0.58 2 61 37 105 69 4 9 150 E1YB88 Putative uncharacterized protein OS=uncultured Desulfobacterium sp. GN=N47_C18230 PE=4 SV=1
63 : E4TEM1_CALNY 0.31 0.47 1 67 427 503 77 3 10 503 E4TEM1 Multiheme C-type cytochrome (Precursor) OS=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) GN=Calni_1470 PE=4 SV=1
## ALIGNMENTS 1 - 63
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A A 0 0 93 51 32 AAAASA AAAAAAAAAAAAAAA AA AAAAPAAPPPATPPAPAAA AA S A SN A A
2 2 A D - 0 0 82 59 43 DDDDDD DDDDDDDDDDDDDDD DDTDDDDEDAAAADASSDSDAAGADDDDEES EDDAEE
3 3 A V E +A 16 0A 89 61 77 VSSSVTVVTTSVTTTTTVTTVVV EDVDEDTTTPTTTTPKKVKVPPVPVKKVTTN VRQQTQ
4 4 A V E -A 15 0A 59 63 52 VVVVIVVVVIYIIMMIIILLIIIVVLIVILIMVMALLLYVVVFVFTTYTIIIIIII IMIMKH
5 5 A T E -A 14 0A 64 63 67 TVVVTVVVVTETSTTTTTTTLSLVVTVVVTVIVITTTTETVVEVEVVKVETTETTG PETTGK
6 6 A Y E -A 13 0A 73 63 49 YYYYYLLLMLYLLFFLLMFFFLFLLFLLLFLFIFLLLLYLRRFRFLLYLLYYFFFQ MFVLYI
7 7 A E + 0 0 164 63 69 EPPPAKEEKPKPPTTPEPPPPPPPPKKQKKKPEPEQQQTETTPTPKKEKPPPPPPN KPNNEN
8 8 A N - 0 0 55 64 50 NAAAEAAAAAGAAAAAAAAASASAAAAAAAAANAAAAAGATTATAAAGAATTSNNGTNNGGSS
9 9 A K S S+ 0 0 205 64 39 KKKKgKKKKKgKKKKKKKKKKKKKKKKKKKKKNKKKKKKKkkSkSKKaKSRRSRRKKKKTgQT
10 10 A K S S- 0 0 81 59 71 KNNNkNNNNNmNNNNNNNNNNNNNNNNNNNNNYNNPPP.NyyMyMNNkNMIIIII...K.tKK
11 11 A G - 0 0 2 62 10 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDP.G.GGK
12 12 A N - 0 0 68 62 60 NNNNSNNNNNKDNNNNNDNNANANNDDNDDDNNNNNNNTNTTKTKDDVDKAAKQQDA.T.DAP
13 13 A V E -AB 6 66A 18 64 6 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVIVVVVVVVVVVVVVIVVVVVVVIVVVFVVV
14 14 A T E -A 5 0A 75 64 49 TTTTTTTTTTATTTTTTTSSTTTTTKKTKKKTTTTTTTTTTTTTTTTTTMVVTSSRQRVTPQV
15 15 A F E -A 4 0A 44 64 3 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFLFFFFFFFLLFLFFFFFFFFFFFFFFFFFFF
16 16 A D E +A 3 0A 78 64 65 DNNNDDDDDNPNEDDNNNGGTNTPPPPPPPPNTNNPPPNEDDPDPNNDNPPPTPPPENNSPAA
17 17 A H S > S+ 0 0 63 64 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
18 18 A K H > S+ 0 0 130 64 34 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAKKKKKKSAAKAKKKNKKKKKKKSKFKEGKK
19 19 A A H > S+ 0 0 30 64 73 AAAGSKKKKKAKKKKMKKKKRKRKKKAKAKAHFHTAAAMKAAMAMTTMTKKKAKKRDNKLQKK
20 20 A H H >>S+ 0 0 60 64 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
21 21 A A H X5S+ 0 0 35 64 72 AQQSgSaaSqMqqqqqqqqqsqsqkqqkqqqtGtAaaaGSllqlqAAkAqqqqqqAAmeaqtA
22 22 A E H <5S+ 0 0 127 58 89 EGAAvAvvAa.tsiitttvvfafkkvapavalKl.kkkE.rrmrm..m.maalaaSEyvktyE
23 23 A K H <5S+ 0 0 152 64 83 KKKKETKKSLKLLVVLLLAAVLVEEVVEVVVLTLALLLKAKKLKLAADALLLLLLIKTYGLKM
24 24 A L H <5S- 0 0 89 64 92 LNNNNGGGGKLKKPPKKKGGRKRLLGPMPGPKYKLGGGMVIIKIKVVNVKGGKGGFLEDLEIF
25 25 A G << - 0 0 41 64 62 GEEEGDEEDDGDDDDDEDSSEEEKKNDKDNDEGEKKKKEKSSDSDKKDKDEEDQQAATEAKTE
26 26 A C S >> S+ 0 0 64 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
27 27 A D T 34 S+ 0 0 111 64 67 DKKKKKKKKKAKKAAKKKKKRKRTTKKTKKKKPKEEEESEKKKKKEESEKRRQRRNAFKVDGT
28 28 A A T 34 S- 0 0 43 64 78 AVVVnSAASAKAAVVIVVAASVSDDKKNKKKNTNTTTTSTSSKSKTTSTKGGKGGITQVTADK
29 29 A C T <4 S+ 0 0 83 64 0 CCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
30 30 A H < + 0 0 31 64 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
31 31 A E S S+ 0 0 199 64 51 EgggggeegEEEEGGEGEEEEEEeeEEeEEEDGDAaaataggEgEaaEaEEEaEEReVDGgHe
32 32 A G S S- 0 0 54 63 74 GgggageegKGKKKKKDKKKKKKddKKdKKKKDKSaaaqaggNgNaaGaKKKpKKDfEG.iDv
33 33 A T - 0 0 139 63 60 TAAATTAATAAGGTTGKGAATATKKGGKGGGTNTAAAAPEAAGAGAAEAGGGAGGNEEE.DAK
34 34 A P + 0 0 72 63 55 PPPPPPGGPPPPPPPPTPPPPPPGGPPGPPPPTPAGGGPGVVPVPGGPGPPPGPPIPPV.KKI
35 35 A A S S- 0 0 97 64 37 AAAAAAGGAGKGGGGGGGGGGGGGGGGGGGGGPGGGGGQGTTGTGGGAGGGGGGGAGAGGNGT
36 36 A K - 0 0 150 64 31 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRGRGKKKKKKKKKKKKKKKRRTEEKERPLKKK
37 37 A I - 0 0 74 64 22 IIIIILIILIIIIIIIIIIIIIIIIIIIIIIIPIKIIIIIIIIIIIIIIIIIIIIIVIIVAPL
38 38 A A - 0 0 47 64 71 AAAAATAATEEEEEEEEDEERERAAEEAEEEAFALEEEAEVVKEKEEDEKDDADDRKKQHDLD
39 39 A I - 0 0 28 63 71 IIIIVLGG.GMGGGGGNGGGNGNNNGGDGGGNENEGGGIGFFDFDGGVGEGGGGGLGGTGGAG
40 40 A D > - 0 0 75 64 76 DNNNDGMMLFNFFFFFFFFFFFFLLFFLFFFFLFLFFFTFTTFTFFFSFLFFFFFDTFFTSDT
41 41 A K H > S+ 0 0 164 64 60 KKKKKKGGGGKGGGGGNGGGGGGGGGGSGGGGGGDGGGGGPPGPGGGSGGDDDDDQKGGELLN
42 42 A K H > S+ 0 0 132 64 28 KDEEKDKKKKDKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRKRKKKMKKKKKKKQNKKKKKN
43 43 A S H >>>S+ 0 0 44 64 63 SAAATADDDDVDDEEEDDDDDDDEEDEDEDEDADEDDDKEQQDQDEESEDVVDVVQADAKSAS
44 44 A A H 3<5S+ 0 0 16 64 91 AAAAAAWWAAAFAMMLAFWWYWYWWWMWMWMYTYKKKKEKAAWAWKKAKWMMWLLGFWFLKTF
45 45 A H H 3<5S+ 0 0 104 64 53 HHHHHHAAAAHAAAAAAAAAAAAAAAAAAAAAAAGAAAGAHHAHAAAGAAAAAAAHHGATADH
46 46 A K H <<5S- 0 0 146 64 49 KGGGGKHHHHNHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHDHHHHHHHHHHHGEHHMVKN
47 47 A D T <5S+ 0 0 78 63 70 DKKKK.KKKKKKKggKKKKKKKKKKKgKgKgKVKAGGGAATTKTKAAGAKggKggREERQmvE
48 48 A A S >> S+ 0 0 48 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
50 50 A K H 34 S+ 0 0 94 64 63 KKKKKKTTKKVKKKKKKKKKKKKKKKKKKKKKKKVIIILIRRKRKIIGIKKKKKKLIKIITIF
51 51 A T H >4 S+ 0 0 73 64 48 TEEEIGGGGGKGGGGGGGGGGGGGGGGGGGGGDGEEEEDESSGSGEEGEGGGGGGDKGGDGEP
52 52 A C H X< S+ 0 0 71 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
53 53 A H T 3< S+ 0 0 64 64 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
54 54 A K T < S+ 0 0 157 64 67 KAAAKEKKEEKSEEEEESEEEAETTEETEEEEKEKKKKkkVVTVTkkektEEVEERKTeKkkk
55 55 A S S < S+ 0 0 115 64 66 SAAANteettadteeeedqqvdvddeeeeeevEvkkkkgeqqeqeeeeegeeeaanEkgQgpn
56 56 A N S S- 0 0 85 63 68 NKKKAkggkkkgkkkkkgkkgggggkkgkkkgKgaaaakAaakakAA.AKkkkkkgMtlKkgv
57 57 A N S S- 0 0 148 63 65 NGGGGAKKAAKAAKKAAAAAAAAKKKKKKKKTNTKKKKAKKKKKKKK.KKIIKRRRKRPNTKK
58 58 A G - 0 0 59 64 12 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGDGGGGGGGGVGGGGDN
59 59 A P + 0 0 123 64 14 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPMPPPPPPPPKPPPPAG
60 60 A T - 0 0 111 64 45 TTTTTTTTTTQTTTTTTTTTTTTTTTTTTTTTTTATTTKSTTVTVAAAATVVVVVTKQITTPT
61 61 A K S S- 0 0 217 64 55 KKKKRKKKKKGKKKKKKKKKKKKKKKKKKKKRKRKKKKSKDDGDGKKSKARRSLLDSRTSSKS
62 62 A C S S+ 0 0 76 63 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC C
63 63 A G + 0 0 42 63 64 GGGGGGGGGGKGGGGGGGGGKSKTTGGNGGGGSGAAAASARRTRTAATAKGGKKKGSSDER T
64 64 A G S S+ 0 0 66 63 56 GDDDEEEEEEDEEEEEEEEELELEEDEDEDELGLEEEEQEGGDGDEEFEDDDEGGGTGGSG T
65 65 A C S S+ 0 0 43 63 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC C
66 66 A H B S-B 13 0A 28 63 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH H
67 67 A I 0 0 123 54 27 IKKKVKKKKKKKKKKKKKKK K KKKKKKKKRKRKKKKKK K KKKSKKKKK KK QQ K
68 68 A K 0 0 178 49 0 KKKKKKKKKKKKKKKKKKKK K KKKKKKKKKKKKKKKKK K KKKKKK K K K
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 76 14 6 2 0 0 0 0 0 0 2 0 51 0 0 0.799 26 0.67
2 2 A 0 0 0 0 0 0 0 2 15 0 7 2 0 0 0 0 0 10 0 64 59 0 0 1.123 37 0.57
3 3 A 28 0 0 0 0 0 0 0 0 8 7 33 0 0 2 8 5 3 2 5 61 0 0 1.854 61 0.23
4 4 A 27 11 35 10 3 0 5 0 2 0 0 5 0 2 0 2 0 0 0 0 63 0 0 1.786 59 0.48
5 5 A 32 3 3 0 0 0 0 3 0 2 3 40 0 0 0 3 0 11 0 0 63 0 0 1.589 53 0.32
6 6 A 2 40 3 5 25 0 19 0 0 0 0 0 0 0 5 0 2 0 0 0 63 0 0 1.562 52 0.51
7 7 A 0 0 0 0 0 0 0 0 2 41 0 10 0 0 0 19 6 16 6 0 63 0 0 1.613 53 0.31
8 8 A 0 0 0 0 0 0 0 9 61 0 8 9 0 0 0 0 0 2 11 0 64 0 0 1.252 41 0.50
9 9 A 0 0 0 0 0 0 0 5 2 0 6 3 0 0 6 75 2 0 2 0 64 5 7 1.009 33 0.60
10 10 A 0 0 8 7 0 0 7 0 0 5 0 2 0 0 0 12 0 0 59 0 59 0 0 1.357 45 0.29
11 11 A 0 0 0 0 0 0 0 95 0 2 0 0 0 0 0 2 0 0 0 2 62 0 0 0.247 8 0.90
12 12 A 2 0 0 0 0 0 0 0 10 2 2 8 0 0 0 8 3 0 47 19 62 0 0 1.616 53 0.39
13 13 A 92 0 6 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.313 10 0.93
14 14 A 6 0 0 2 0 0 0 0 2 2 6 69 0 0 3 8 3 0 0 0 64 0 0 1.215 40 0.50
15 15 A 0 6 0 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.234 7 0.97
16 16 A 0 0 0 0 0 0 0 3 3 33 2 6 0 0 0 0 0 5 28 20 64 0 0 1.645 54 0.35
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 64 0 0 0.000 0 1.00
18 18 A 0 0 0 0 2 0 0 2 6 0 3 0 0 0 0 84 0 2 2 0 64 0 0 0.685 22 0.66
19 19 A 0 2 0 8 2 0 0 2 23 0 2 6 0 3 5 44 2 0 2 2 64 0 0 1.781 59 0.26
20 20 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 64 0 0 0.000 0 1.00
21 21 A 0 5 0 3 0 0 0 5 23 0 9 5 0 0 0 5 44 2 0 0 64 6 46 1.671 55 0.27
22 22 A 14 5 3 7 3 0 3 2 22 2 3 9 0 0 5 12 0 9 0 0 58 0 0 2.382 79 0.11
23 23 A 14 33 2 2 0 0 2 2 11 0 2 5 0 0 0 22 0 6 0 2 64 0 0 1.923 64 0.17
24 24 A 6 13 6 3 3 0 2 23 0 8 0 0 0 0 3 20 0 3 8 2 64 0 0 2.232 74 0.08
25 25 A 0 0 0 0 0 0 0 8 5 0 8 3 0 0 0 19 3 25 3 27 64 0 0 1.879 62 0.37
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
27 27 A 2 0 0 0 2 0 0 2 6 2 3 6 0 0 9 48 2 13 2 5 64 0 0 1.821 60 0.32
28 28 A 14 0 3 0 0 0 0 6 16 0 14 17 0 0 0 17 2 0 6 5 64 0 1 2.110 70 0.21
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 64 0 0 0.000 0 1.00
31 31 A 2 0 0 0 0 0 0 23 14 0 0 2 0 2 2 0 0 52 0 5 64 1 26 1.361 45 0.49
32 32 A 2 0 2 0 2 0 0 21 13 2 2 0 0 0 0 38 2 5 3 11 63 0 0 1.849 61 0.25
33 33 A 0 0 0 0 0 0 0 25 35 2 0 17 0 0 0 8 0 8 3 2 63 0 0 1.663 55 0.39
34 34 A 6 0 3 0 0 0 0 21 2 62 0 3 0 0 0 3 0 0 0 0 63 0 0 1.192 39 0.44
35 35 A 0 0 0 0 0 0 0 70 17 2 0 6 0 0 0 2 2 0 2 0 64 0 0 0.984 32 0.63
36 36 A 0 2 0 0 0 0 0 3 0 2 0 2 0 0 8 80 0 5 0 0 64 0 0 0.827 27 0.69
37 37 A 3 5 86 0 0 0 0 0 2 3 0 0 0 0 0 2 0 0 0 0 64 0 0 0.620 20 0.78
38 38 A 3 3 0 0 2 0 0 0 23 0 0 3 0 2 5 8 2 38 0 13 64 1 0 1.830 61 0.28
39 39 A 3 3 10 2 5 0 0 54 2 0 0 2 0 0 0 0 0 5 11 5 63 0 0 1.652 55 0.29
40 40 A 0 11 0 3 56 0 0 2 0 0 3 11 0 0 0 0 0 0 6 8 64 0 0 1.462 48 0.23
41 41 A 0 3 0 0 0 0 0 59 0 5 3 0 0 0 0 14 2 2 3 9 64 0 0 1.406 46 0.39
42 42 A 0 0 0 2 0 0 0 0 0 0 0 0 0 0 5 81 2 3 3 5 64 0 0 0.802 26 0.72
43 43 A 8 0 0 0 0 0 0 0 13 0 8 2 0 0 0 3 6 20 0 41 64 0 0 1.695 56 0.37
44 44 A 0 6 0 11 8 23 6 2 25 0 0 3 0 0 0 14 0 2 0 0 64 0 0 1.989 66 0.08
45 45 A 0 0 0 0 0 0 0 6 69 0 0 2 0 22 0 0 0 0 0 2 64 0 0 0.893 29 0.47
46 46 A 2 0 0 2 0 0 0 8 0 0 0 0 0 73 0 6 0 5 3 2 64 1 0 1.046 34 0.50
47 47 A 3 0 0 2 0 0 0 21 10 0 0 5 0 0 3 48 2 5 0 3 63 4 11 1.653 55 0.29
48 48 A 2 25 0 2 0 0 0 12 8 0 8 38 0 0 0 2 2 0 0 2 60 0 0 1.720 57 0.23
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
50 50 A 3 3 17 0 2 0 0 2 0 0 0 5 0 0 5 64 0 0 0 0 64 0 0 1.221 40 0.36
51 51 A 0 0 2 0 0 0 0 61 0 2 5 3 0 0 0 3 0 19 0 6 64 0 0 1.279 42 0.52
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 64 0 0 0.000 0 1.00
54 54 A 6 0 0 0 0 0 0 0 6 0 3 11 0 0 2 33 0 39 0 0 64 0 11 1.495 49 0.32
55 55 A 6 0 0 0 0 0 0 6 9 2 3 6 0 0 0 8 9 38 5 8 64 1 49 2.047 68 0.33
56 56 A 2 2 0 2 0 0 0 22 19 0 0 2 0 0 0 49 0 0 3 0 63 0 0 1.372 45 0.32
57 57 A 0 0 3 0 0 0 0 6 22 2 0 5 0 0 6 49 0 0 6 0 63 0 0 1.529 51 0.34
58 58 A 2 0 0 0 0 0 0 92 2 0 0 0 0 0 0 0 0 0 2 3 64 0 0 0.378 12 0.88
59 59 A 0 0 0 2 0 0 0 2 2 94 0 0 0 0 0 2 0 0 0 0 64 0 0 0.320 10 0.86
60 60 A 11 0 2 0 0 0 0 0 8 2 2 70 0 0 0 3 3 0 0 0 64 0 0 1.100 36 0.54
61 61 A 0 3 0 0 0 0 0 5 2 0 11 2 0 0 9 63 0 0 0 6 64 0 0 1.313 43 0.44
62 62 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 63 0 0 0.000 0 1.00
63 63 A 0 0 0 0 0 0 0 48 13 0 8 10 0 0 6 11 0 2 2 2 63 0 0 1.657 55 0.35
64 64 A 0 6 0 0 2 0 0 19 0 0 2 3 0 0 0 0 2 48 0 19 63 0 0 1.467 48 0.44
65 65 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 63 0 0 0.000 0 1.00
66 66 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 63 0 0 0.000 0 1.00
67 67 A 2 0 4 0 0 0 0 0 0 0 2 0 0 0 4 85 4 0 0 0 54 0 0 0.651 21 0.72
68 68 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 49 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
2 32 52 1 gDg
3 32 52 1 gDg
4 32 52 1 gDg
5 10 30 2 gCKk
5 22 44 2 gEFv
5 29 53 2 nAAc
5 32 58 1 gDa
6 32 52 1 gEg
6 55 76 1 tKk
7 20 43 1 aGv
7 30 54 1 eTe
7 54 79 1 eMg
8 20 43 1 aGv
8 30 54 1 eTe
8 54 79 1 eMg
9 32 52 1 gEg
9 55 76 1 tKk
10 22 42 1 qEa
10 56 77 1 tKk
11 10 30 1 gAm
11 55 76 1 aEk
12 22 42 1 qDt
12 56 77 1 dKg
13 22 42 1 qEs
13 56 77 1 tKk
14 22 42 1 qTi
14 48 69 1 gKs
14 56 78 1 eMk
15 22 42 1 qTi
15 48 69 1 gKs
15 56 78 1 eMk
16 22 42 1 qDt
16 56 77 1 eKk
17 22 42 1 qEt
17 56 77 1 eKk
18 22 42 1 qDt
18 56 77 1 dKg
19 22 42 1 qQv
19 56 77 1 qKk
20 22 42 1 qQv
20 56 77 1 qKk
21 22 42 1 sEf
21 56 77 1 vRg
22 22 42 1 qEa
22 56 77 1 dKg
23 22 42 1 sEf
23 56 77 1 vRg
24 19 44 2 qDMk
24 29 56 1 eTd
24 53 81 1 dKg
25 19 44 2 kDMk
25 29 56 1 eTd
25 53 81 1 dKg
26 22 42 1 qQv
26 56 77 1 eMk
27 22 42 1 qKa
27 48 69 1 gKg
27 56 78 1 eMk
28 21 44 2 kDMp
28 31 56 1 eTd
28 55 81 1 eKg
29 22 42 1 qKa
29 48 69 1 gKg
29 56 78 1 eMk
30 22 42 1 qQv
30 56 77 1 eMk
31 22 42 1 qKa
31 48 69 1 gKg
31 56 78 1 eMk
32 22 42 1 tDl
32 56 77 1 vRg
34 22 42 1 tDl
34 56 77 1 vRg
35 55 79 1 kEa
36 22 45 1 aDk
36 32 56 1 aTa
36 56 81 1 kEa
37 22 45 1 aDk
37 32 56 1 aTa
37 56 81 1 kEa
38 22 45 1 aDk
38 32 56 1 aTa
38 56 81 1 kEa
39 31 52 1 tTq
39 54 76 5 kKEQKKg
39 55 82 1 gNk
40 31 53 1 aTa
40 54 77 1 kKe
41 10 59 1 kTy
41 22 72 1 lAr
41 32 83 1 gNg
41 55 107 1 qIa
42 10 59 1 kTy
42 22 72 1 lAr
42 32 83 1 gNg
42 55 107 1 qIa
43 22 44 1 qEm
43 56 79 1 eLk
44 10 55 1 kTy
44 22 68 1 lAr
44 32 79 1 gNg
44 55 103 1 qLa
45 22 44 1 qEm
45 56 79 1 eLk
46 31 53 1 aTa
46 54 77 1 kKe
47 31 53 1 aTa
47 54 77 1 kKe
48 9 60 1 aTk
48 21 73 2 kEMm
48 54 108 2 eQVe
49 31 53 1 aTa
49 54 77 1 kKe
50 22 47 1 qEm
50 55 81 4 tEGFNg
51 21 42 1 qDa
51 47 69 1 gKg
51 55 78 1 eMk
52 21 42 1 qDa
52 47 69 1 gKg
52 55 78 1 eMk
53 22 42 1 qEl
53 32 53 1 aSp
53 56 78 1 eMk
54 21 45 1 qDa
54 47 72 1 gKg
54 55 81 1 aMk
55 21 45 1 qDa
55 47 72 1 gKg
55 55 81 1 aMk
56 54 87 1 nKg
57 24 459 8 eDPEAGLLKf
58 19 40 1 mNy
58 53 75 1 kMt
59 22 43 2 eKLv
59 55 78 3 ePEAg
59 56 82 1 gKl
60 18 127 2 aGKk
61 10 43 1 gKt
61 22 56 1 qTt
61 32 67 8 gMFPQEKGVi
61 48 91 1 mNq
61 55 99 5 kEMKKAg
61 56 105 1 gEk
62 21 57 2 tEEy
62 47 85 1 vQs
62 54 93 5 kKPGTKp
62 55 99 1 pKg
63 32 458 8 eKPEEGTLKv
63 55 489 1 kEn
63 56 491 1 nKv
//