Complet list of 1e8e hssp file
Complete list of 1e8e.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1E8E
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-28
HEADER OXIDOREDUCTASE(CYTOCHROME) 20-SEP-00 1E8E
COMPND MOL_ID: 1; MOLECULE: CYTOCHROME C''; CHAIN: A; OTHER_DETAILS: C-TYPE C
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: METHYLOPHILUS METHYLOTROPHUS; ORGANISM
AUTHOR L.BRENNAN,D.L.TURNER,P.FARELEIRA,H.SANTOS
DBREF 1E8E A 1 124 UNP Q9RQB9 Q9RQB9 21 144
SEQLENGTH 124
NCHAIN 1 chain(s) in 1E8E data set
NALIGN 34
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CYCA_METME 1.00 1.00 1 124 21 144 124 0 0 144 Q9RQB9 Cytochrome c'' OS=Methylophilus methylotrophus GN=cycA PE=1 SV=1
2 : C6WTV2_METML 0.63 0.80 1 123 25 146 123 1 1 149 C6WTV2 Uncharacterized protein (Precursor) OS=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) GN=Mmol_2343 PE=4 SV=1
3 : D7DPN4_METS0 0.59 0.76 1 123 22 144 123 0 0 149 D7DPN4 Uncharacterized protein (Precursor) OS=Methylotenera sp. (strain 301) GN=M301_2794 PE=4 SV=1
4 : G8QKC5_AZOSU 0.42 0.62 3 118 26 137 116 1 4 140 G8QKC5 Uncharacterized protein (Precursor) OS=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) GN=Dsui_2245 PE=4 SV=1
5 : H0Q265_9RHOO 0.38 0.61 1 121 20 135 121 1 5 135 H0Q265 Uncharacterized protein OS=Azoarcus sp. KH32C GN=AZKH_3475 PE=4 SV=1
6 : A4TZD0_9PROT 0.36 0.70 26 119 42 135 94 0 0 135 A4TZD0 Cytochrome c-type protein Shp OS=Magnetospirillum gryphiswaldense GN=MGR_3315 PE=4 SV=1
7 : V6F4G0_9PROT 0.36 0.70 26 119 42 135 94 0 0 135 V6F4G0 Cytochrome c-type protein SHP OS=Magnetospirillum gryphiswaldense MSR-1 v2 GN=shp PE=4 SV=1
8 : W6MCW9_9GAMM 0.36 0.64 1 118 17 130 118 1 4 132 W6MCW9 Uncharacterized protein OS=Candidatus Competibacter denitrificans Run_A_D11 GN=BN873_980016 PE=4 SV=1
9 : B9Z6M8_9NEIS 0.35 0.59 2 118 20 134 117 2 2 136 B9Z6M8 Uncharacterized protein (Precursor) OS=Pseudogulbenkiania ferrooxidans 2002 GN=FuraDRAFT_2925 PE=4 SV=1
10 : D7DK68_METS0 0.35 0.57 2 116 18 131 115 1 1 135 D7DK68 Uncharacterized protein (Precursor) OS=Methylotenera sp. (strain 301) GN=M301_0065 PE=4 SV=1
11 : J9DT27_9RHOB 0.34 0.59 23 118 45 139 96 1 1 140 J9DT27 Ubiquinol--cytochrome c reductase, cytochrome B subunit OS=Rhodovulum sp. PH10 GN=A33M_1165 PE=4 SV=1
12 : M9S790_PSEAI 0.34 0.61 2 116 21 133 115 2 2 137 M9S790 Uncharacterized protein OS=Pseudomonas aeruginosa B136-33 GN=G655_23835 PE=4 SV=1
13 : S6AET3_9PROT 0.34 0.65 3 116 22 133 114 1 2 139 S6AET3 Uncharacterized protein OS=Sulfuricella denitrificans skB26 GN=SCD_n00473 PE=4 SV=1
14 : U8NLA3_PSEAI 0.34 0.61 2 116 21 133 115 2 2 137 U8NLA3 Uncharacterized protein OS=Pseudomonas aeruginosa BWHPSA026 GN=Q039_02584 PE=4 SV=1
15 : G2IYD7_PSEUL 0.33 0.61 2 118 20 134 117 2 2 136 G2IYD7 Putative uncharacterized protein OS=Pseudogulbenkiania sp. (strain NH8B) GN=NH8B_3296 PE=4 SV=1
16 : E4TZB9_SULKY 0.32 0.59 9 119 25 135 111 0 0 135 E4TZB9 Uncharacterized protein (Precursor) OS=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) GN=Sulku_1472 PE=4 SV=1
17 : H8FNX4_PHAMO 0.32 0.66 6 119 173 285 114 1 1 285 H8FNX4 Uncharacterized protein OS=Phaeospirillum molischianum DSM 120 GN=PHAMO_180031 PE=4 SV=1
18 : I4CX51_PSEST 0.32 0.58 2 116 19 131 115 2 2 135 I4CX51 Uncharacterized protein OS=Pseudomonas stutzeri CCUG 29243 GN=A458_17165 PE=4 SV=1
19 : K5YHE3_9PSED 0.32 0.58 2 116 19 131 115 2 2 135 K5YHE3 Uncharacterized protein OS=Pseudomonas sp. Chol1 GN=C211_17315 PE=4 SV=1
20 : L0GMF6_PSEST 0.32 0.58 2 116 18 130 115 2 2 134 L0GMF6 Adenylate cyclase (Precursor) OS=Pseudomonas stutzeri RCH2 GN=Psest_3454 PE=4 SV=1
21 : M2TPM8_PSEST 0.32 0.58 2 116 19 131 115 2 2 135 M2TPM8 Uncharacterized protein OS=Pseudomonas stutzeri NF13 GN=B381_15343 PE=4 SV=1
22 : S9TVF1_PHAFV 0.32 0.68 6 119 175 287 114 1 1 287 S9TVF1 Uncharacterized protein OS=Phaeospirillum fulvum MGU-K5 GN=K678_06103 PE=4 SV=1
23 : V4QBI8_PSECO 0.32 0.58 2 116 19 131 115 2 2 135 V4QBI8 Uncharacterized protein OS=Pseudomonas chloritidismutans AW-1 GN=F753_21545 PE=4 SV=1
24 : V8EEH3_PSEAI 0.32 0.60 2 116 21 133 115 2 2 137 V8EEH3 Uncharacterized protein OS=Pseudomonas aeruginosa VRFPA07 GN=X778_19475 PE=4 SV=1
25 : W6ESK6_DEHMU 0.32 0.58 9 119 28 138 111 0 0 138 W6ESK6 Monohem cytochrome c OS=Sulfurospirillum multivorans DSM 12446 GN=SMUL_2193 PE=4 SV=1
26 : B6IR22_RHOCS 0.31 0.61 1 119 38 154 119 1 2 154 B6IR22 Mono-heme class I cytochrome c OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=RC1_0471 PE=4 SV=1
27 : C4ZMG2_THASP 0.31 0.60 2 119 22 138 118 1 1 138 C4ZMG2 Uncharacterized protein OS=Thauera sp. (strain MZ1T) GN=Tmz1t_1925 PE=4 SV=1
28 : D5V812_ARCNC 0.31 0.58 6 121 20 135 116 0 0 135 D5V812 Uncharacterized protein OS=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) GN=Arnit_3137 PE=4 SV=1
29 : N6XWA4_9RHOO 0.31 0.60 2 119 22 138 118 1 1 138 N6XWA4 Uncharacterized protein OS=Thauera aminoaromatica S2 GN=C665_08645 PE=4 SV=1
30 : N6Y9T6_9RHOO 0.31 0.59 2 119 22 138 118 1 1 138 N6Y9T6 Uncharacterized protein OS=Thauera sp. 63 GN=C664_06368 PE=4 SV=1
31 : N6ZQ35_9RHOO 0.31 0.58 2 119 22 138 118 1 1 138 N6ZQ35 Uncharacterized protein OS=Thauera phenylacetica B4P GN=C667_14132 PE=4 SV=1
32 : Q5NXN7_AROAE 0.31 0.58 2 119 22 138 118 1 1 138 Q5NXN7 Potential ortholog of Methylophilus methylotrophus cytochrome c OS=Aromatoleum aromaticum (strain EbN1) GN=ebA7148 PE=4 SV=1
33 : I4JMA8_PSEST 0.30 0.57 2 116 19 131 115 2 2 135 I4JMA8 Uncharacterized protein OS=Pseudomonas stutzeri TS44 GN=YO5_07197 PE=4 SV=1
34 : K9GX27_9PROT 0.30 0.62 1 119 24 142 119 0 0 142 K9GX27 Ubiquinol--cytochrome c reductase, cytochrome B subunit OS=Caenispirillum salinarum AK4 GN=C882_0222 PE=4 SV=1
## ALIGNMENTS 1 - 34
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A D 0 0 146 8 58 DNS H H D D
2 2 A V >> + 0 0 57 25 38 VII A AAA A AA AAAA AA AA AAAGAA
3 3 A T H >5S+ 0 0 107 27 62 TTATE ESA AEAS KEEE EA AA AAAGEA
4 4 A N H >5S+ 0 0 33 27 72 NNNST TST ETES TTTT TE SP PQPPTD
5 5 A A H >5S+ 0 0 5 27 70 AAAPP PPS PPPP EEEE EP RS SPSRER
6 6 A E H X5S+ 0 0 93 30 74 EEKAK AAQ TSTA DHHHHDHT DADAATEHA
7 7 A K H XX>S+ 0 0 4 30 17 LLLLF FLL LLLL ILLLLILL LLYLLLLLI
9 9 A V H 3X5S+ 0 0 17 32 37 VTVQL QLL LILLMLLLLLLLLMLLLLILILL
10 10 A Y H 3<5S+ 0 0 169 32 82 YKLAE KQK DTDQNAAPPPAADDAENEDEDAS
11 11 A K H XX5S+ 0 0 80 32 80 KKIAR QGQ NGNSDTGGGGDGNTSRNRRRRGG
12 12 A Y H 3X5S+ 0 0 25 32 17 YYYWY FYY YYYYLYYYYYYYYLYYLYYYYYY
13 13 A T H 3X S+ 0 0 100 32 49 NGTAT AAV AAAAKAAAAAKAAAAAIAAAAAE
15 15 A I H X S+ 0 0 86 32 60 IIQEE QEQ QEQETAQQQQAQQEQEEEEEAQQ
16 16 A A H >X S+ 0 0 2 32 6 AAAAA AAA AAAAAAAAAAAAAAAAVAAAAAA
17 17 A H H 3< S+ 0 0 67 32 55 HQIRR QRK RARRKKRRRRKRRKKRQRRRKRA
18 18 A S H 3< S+ 0 0 106 32 66 STAQQ QQQ QRQQAAQQQQAQQAAAKAAVAQA
19 19 A A H << S+ 0 0 72 32 64 AVESG EAE QAQAEAEEEEAEQAQTSTAAAQD
20 20 A N >< - 0 0 97 32 42 NNNNA NAN DTDANDNNNNDNDNDDNDDDDDD
21 21 A P T 3 S+ 0 0 89 32 27 PPKPP PPT PPPPSGPPPPSPPPPPPPPPPAP
22 22 A M T 3 S+ 0 0 168 32 68 MEEAS AGA NGNGATNNANGNNSAANAAASNG
23 23 A Y < + 0 0 46 33 2 YFFLF FFFFFFFFFFFFFFFFFFFFFFFFFFF
24 24 A E + 0 0 125 32 65 E.ARA TSASTATSNGTAAATATTTAKAAAVAS
25 25 A A - 0 0 65 33 26 AVGAA GGGGGPGGGGSGGGGGGGGGGGGGGGG
26 26 A P - 0 0 43 35 54 PTPFSFFFFFPFSFFFFFFFFFFFFFFFFFFFFF
27 27 A S - 0 0 50 35 28 SSSSASSSSSSSASSDSSSSSSSSDSSDSSSSST
28 28 A I S S+ 0 0 84 35 39 IVAAEAAAAAAGEGAAAAAAAAAGAAAIAAAAAA
29 29 A T S S+ 0 0 104 35 63 TTEERQQEEEEEREEAAEEEEAEEKEAKAAAAEA
30 30 A D S > S+ 0 0 95 35 41 DEERGRRQRRRRGRRRRRRRRRRRRRRRRRRRRR
31 31 A G T 4 S+ 0 0 4 34 6 GGGG.GGGGGGGQGGGGGGGGGGGGGGGGGGGGG
32 32 A K T >4 S+ 0 0 49 34 56 KKKR.EEQKARKSKKKEKKQKEKKEREEEEEEKE
33 33 A I G >> S+ 0 0 105 34 75 IMAS.TTRESKALAEEQTAAASAATAAEATATAD
34 34 A F G 3< S+ 0 0 45 34 21 FFFF.LLFLFFLFLLIILLLLILLLVLILLLLLL
35 35 A F G <4 S+ 0 0 4 34 33 FFFF.FFYYFFYMYYFYYYYYYYYFYHFHHHHYF
36 36 A N T <4 S+ 0 0 69 35 95 NNNSQRRAYKFFRFYTRFFVFRFFFLRTRRRRFR
37 37 A R < - 0 0 168 35 76 RRNTTTTNRAARKRRSAAAAAAARSGTSTTTTAT
38 38 A K - 0 0 153 21 72 KKK.FQQ..EE.W..T...E....KQRKRRRQ.R
39 39 A F E -A 47 0A 36 33 91 FFV.FWW.RRHKGKRHREEEEREKQVHHHYHHEW
40 40 A K E -A 46 0A 144 33 77 KKK.NKK.NTAAVANTNEEQENEATAGMGGGNEA
41 41 A T E >> -A 45 0A 13 33 85 TMT.TGG.THGLSLTGTQQRQTQLGGLGLLLMQG
42 42 A P T 34 S+ 0 0 104 35 82 PPATVGGTKSGRKRKKVRRSRVRRKAGKGGGGRG
43 43 A S T 34 S- 0 0 89 35 64 SNNHRDDHDDKDTDDQNNNGNNDDKEKKKKKKDD
44 44 A G T <4 S+ 0 0 57 35 54 GGGGDEEGGGADMDGGPGGKGAGDGAPGPPPAGA
45 45 A K E < -A 41 0A 102 35 55 KKKSRRRKKKDKPKKKDKKTKDKKSDDKDDDDKR
46 46 A E E +A 40 0A 122 33 74 EEEDDTTEAKSNSNAPFTT.TFTNE.TETTTTTT
47 47 A A E -A 39 0A 20 34 87 AMVWWPPWIVPMCMIMPMMMMPMMM.PIPPPPMP
48 48 A A > - 0 0 15 35 40 AAASSSSSSSASASSASSSSSSSSSGASAAAASA
49 49 A C T 3> S+ 0 0 31 34 0 CCCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCC
50 50 A A T 34 S+ 0 0 25 34 38 AAAAATTAAATT.TATATTTTATTTATTTTTTTT
51 51 A S T <4 S+ 0 0 50 35 48 SSSSSAASSTSTTTSSTTTSTTTTTASSSSSSTA
52 52 A C T 4 S+ 0 0 27 35 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
53 53 A H S < S- 0 0 36 35 0 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
54 54 A T - 0 0 31 35 42 TTTTTTTSSTGGSGSTTTTTTTTGTTGGGGGGTT
55 55 A N S S+ 0 0 98 34 74 NTANRDDQDS.ADADLDAATADAAIAEIEDENAE
56 56 A N > - 0 0 16 35 33 NNNNNNNNDDKDQDDNDDDDDDDDNDNDNDNDDD
57 57 A P T 3 S+ 0 0 15 34 44 PPPPPPPPPPDPPP.LPPPPPPPPLPALAVATPP
58 58 A A T 3 S+ 0 0 4 35 80 AAAGARRKRRLLTLPATRRRRTRLKRRTRRRRRR
59 59 A N S < S- 0 0 39 35 74 NNDQAQQARKTKAKRNRQQQQRQKNASKSAASKA
60 60 A V - 0 0 76 34 72 VPNGTPPISQKAEARPPPPAPPPAGTASAP.APQ
61 61 A G B -B 70 0B 6 34 11 GGGGGGGGGGPGGGSGGGGGGGG.GGGGGGAGGG
62 62 A K - 0 0 121 35 55 KKKAKRRQMKGKKKGKRKKKKRKGQQQKQKGRKR
63 63 A N > - 0 0 53 23 59 NHNHHNNHT.E.H.MNH..T.H.KNH.N..Q..N
64 64 A I T 4 S+ 0 0 92 35 67 IAIAAAAIPTTTVTTSATTPTATTVRTFTTTTTA
65 65 A V T 4 S- 0 0 130 35 89 VLVVTKKASRRLVLPLKPPAPKPLNKRFRRRRPK
66 66 A T T 4 S- 0 0 94 35 38 TTTTTTTTFAATTTSTTAAQATATTTTTTTTTAT
67 67 A G < + 0 0 46 35 75 GGGRGGGGRNGFSFFGGHHRHGHFNGGGGGGRHG
68 68 A K - 0 0 172 34 25 KKKKKRRK.KKRKRRKRRRKRRRRKRKKKKKKRR
69 69 A E - 0 0 141 35 83 ESVLVPPTKVAKRKKVEKKVKEKKPAAVAAAPKP
70 70 A I B -B 61 0B 41 34 9 IIIIIIILIIIIIIIIIVV.VIVIIIIIIIIIVI
71 71 A P - 0 0 55 35 52 PEKEEDDAGEEEAEGEADDDDADETKEEEEEEDE
72 72 A P - 0 0 37 35 4 PPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP
73 73 A L + 0 0 39 35 29 LLLLMVVLMMMLLLMLALLLLALLLVMLMMMMLA
74 74 A A > - 0 0 1 35 21 ASSAAAAAAAAASAASAAAAAAAAAAASAAAAAA
75 75 A P T 4 S+ 0 0 10 35 58 PPPPPVVPSTAPPPSPVPPPPVPPPVVPVLVLPV
76 76 A R T 4 S+ 0 0 106 35 64 RAVAASSAAISSASARSAAVASASSSSISSSSAS
77 77 A V T 4 S+ 0 0 54 35 47 VVVAAVVAVAVAVAVAAAAAAAAAAVVAVVVVAV
78 78 A N S >< S- 0 0 30 35 46 NNNNNNNSNNTANANNNNNNNNNANSSNSVSSNE
79 79 A T T 3 S+ 0 0 106 35 40 TNTPPAAPPPAPPPPPPPPPPPPPPPAPAAAPPP
80 80 A K T 3 S+ 0 0 161 35 70 KKKREKKEEQTAKAEQKEEKEKEAAWTKTTTEED
81 81 A R S < S+ 0 0 100 35 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
82 82 A F S S+ 0 0 39 35 5 FFFFFFFFFFYFFFFLFFFFFFFFLFYFYYYYFF
83 83 A T + 0 0 90 35 46 TKSSVTTTRTTTTTRTTTTTTTTTTTGTGSGKTT
84 84 A D - 0 0 81 35 21 DDDDSDDRDDDDNDDSDDDDDDDDDDDEDDDDDD
85 85 A I S > S+ 0 0 53 35 80 IIFAEAAPPAPTLTPTALLLLALTVAPVPPPALI
86 86 A D T >4 S+ 0 0 99 35 68 DEDARGGDATAKAKAKEKKAKEKKADAKAAAAKD
87 87 A K T 3> S+ 0 0 123 35 39 KKKKTEEKKKNKKKKEKKKKKKKKEYKNKKKKKE
88 88 A V H 3> S+ 0 0 32 35 1 VVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVV
89 89 A E H << S+ 0 0 91 35 6 EEEDEEEEEEEEEEENEEEEEEEEEEEEEEEEEE
90 90 A D H >> S+ 0 0 80 35 29 DEAKKKKKKKKKKKKKEKKKKEKKKKKKKKKKKK
91 91 A E H 3X S+ 0 0 141 35 54 EKKWWQQWWWWWWWWWRWWWWRWWWHWWWWWWWQ
92 92 A F H 3X S+ 0 0 33 35 3 FFFFFFFFFFFFFFFLFFFFFFFFLFFLFFFFFF
93 93 A T H <> S+ 0 0 33 35 67 TTSGTSSKRGRRGRRKNRRRRNRRRRKRKKKKRR
94 94 A K H < S+ 0 0 109 35 17 KEQRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
95 95 A H H >X S+ 0 0 82 35 31 HHHNNDDNNNNNNNNNDNNNNDNNNDNNNNNNND
96 96 A a H 3X>S+ 0 0 18 35 19 CCCCCCCCCCCCCCCFCCCCCCCCFCCFCCCCCC
97 97 A N H 3<5S+ 0 0 74 35 62 NNVKKKKNDKRNKNDMKDDDDKDNNPNNNTNDDD
98 98 A D H <45S+ 0 0 142 35 33 DEDDDNNEDDDDEDDDTDDDDTDDDGEDEEEEDS
99 99 A I H <5S+ 0 0 61 35 6 IIIVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
100 100 A L T <5S- 0 0 63 35 30 LILLLLLLLLLFVFLYLYYFYLFFFLLYLLLLYL
101 101 A G S > - 0 0 66 35 41 STTTSTTTTTTSSSTSSTTTTSTSSSSTSTSTTT
106 106 A P H 3> S+ 0 0 54 35 25 PAAPPAAAPAAAAAPAAAAAAAAAAAAAAPAPAA
107 107 A S H 34 S+ 0 0 30 35 77 SAAEARRQLQAQAQLQRQQQQRQQLQRQRRRLQR
108 108 A E H <> S+ 0 0 68 35 7 EEQEEEEEEEEEEEEEDEEEEDEEEEEEEEEEEE
109 109 A K H X S+ 0 0 8 35 5 KKKKKKKKKKKKKKKKRKKKKRKKKKKKKKKKKK
110 110 A A H X S+ 0 0 0 35 20 AAAGAGGGGGAGAGGGGGGGGGGGGGGGGGGGGG
111 111 A N H > S+ 0 0 4 35 13 NNNDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
112 112 A F H X S+ 0 0 27 35 41 FYYLVYYVFYAFFFFVFFFFFFFFVYWVWWWWFY
113 113 A I H X S+ 0 0 0 35 24 IIILIIILLILIIILLIIIIIIIILILVLLLLII
114 114 A A H >< S+ 0 0 7 35 63 AITAATTSTQASQSTTTSSSSTSSTTATAAAAST
115 115 A Y H >X S+ 0 0 37 35 11 YYYYYFFYFYFWFWFYFWWWWFWWYFWYWWWYWF
116 116 A L H 3< S+ 0 0 7 35 31 LLVLLMMLLLLIVILILIIIILIIILMIMMMMIM
117 117 A L T << S+ 0 0 23 24 72 LLLLLMMLT L TMA S IASLSTSM Q
118 118 A T T <4 S+ 0 0 45 24 59 TTTTSGGST G TKS S NSTSTSTN E
119 119 A E < + 0 0 89 19 56 EEE IQQ NK K QQQKQQQQ Q
120 120 A T + 0 0 62 6 86 TRK S D
121 121 A K - 0 0 178 6 60 KTT R K
122 122 A P - 0 0 62 4 0 PPP
123 123 A T 0 0 111 4 46 TST
124 124 A K 0 0 238 2 0 K
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 13 0 0 25 0 0 0 0 13 50 8 0 0 1.213 40 0.42
2 2 A 8 0 8 0 0 0 0 4 80 0 0 0 0 0 0 0 0 0 0 0 25 0 0 0.711 23 0.62
3 3 A 0 0 0 0 0 0 0 4 41 0 7 15 0 0 0 4 0 30 0 0 27 0 0 1.446 48 0.38
4 4 A 0 0 0 0 0 0 0 0 0 15 15 37 0 0 0 0 4 11 15 4 27 0 0 1.705 56 0.27
5 5 A 0 0 0 0 0 0 0 0 15 37 15 0 0 0 11 0 0 22 0 0 27 0 0 1.512 50 0.30
6 6 A 0 0 0 0 0 0 0 0 27 0 3 13 0 20 0 7 3 13 0 13 30 0 0 1.888 63 0.25
7 7 A 0 0 0 0 0 0 0 3 33 20 3 3 0 0 0 10 0 13 0 13 30 0 0 1.796 59 0.30
8 8 A 0 80 10 0 7 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 30 0 0 0.703 23 0.83
9 9 A 9 66 9 6 0 0 0 0 0 0 0 3 0 0 0 0 6 0 0 0 32 0 0 1.175 39 0.63
10 10 A 0 3 0 0 0 0 6 0 22 9 3 3 0 0 0 9 6 13 6 19 32 0 0 2.195 73 0.18
11 11 A 0 0 3 0 0 0 0 28 3 0 6 6 0 0 19 9 6 0 13 6 32 0 0 2.062 68 0.19
12 12 A 0 9 0 0 3 3 84 0 0 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0.582 19 0.83
13 13 A 0 3 0 0 0 0 0 0 63 0 6 16 0 3 0 3 3 3 0 0 32 0 0 1.299 43 0.44
14 14 A 3 0 3 0 0 0 0 3 69 0 0 6 0 0 0 6 0 3 6 0 32 0 0 1.211 40 0.50
15 15 A 0 0 9 0 0 0 0 0 9 0 0 3 0 0 0 0 44 34 0 0 32 0 0 1.281 42 0.40
16 16 A 3 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 0 0 32 0 0 0.139 4 0.94
17 17 A 0 0 3 0 0 0 0 0 6 0 0 0 0 6 53 22 9 0 0 0 32 0 0 1.345 44 0.45
18 18 A 3 0 0 0 0 0 0 0 34 0 6 3 0 0 3 3 47 0 0 0 32 0 0 1.329 44 0.34
19 19 A 3 0 0 0 0 0 0 3 34 0 6 6 0 0 0 0 16 28 0 3 32 0 0 1.685 56 0.35
20 20 A 0 0 0 0 0 0 0 0 9 0 0 3 0 0 0 0 0 0 47 41 32 0 0 1.051 35 0.57
21 21 A 0 0 0 0 0 0 0 3 3 81 6 3 0 0 0 3 0 0 0 0 32 0 0 0.775 25 0.72
22 22 A 0 0 0 6 0 0 0 16 31 0 9 3 0 0 0 0 0 6 28 0 32 0 0 1.687 56 0.31
23 23 A 0 3 0 0 91 0 6 0 0 0 0 0 0 0 0 0 0 0 0 0 33 1 0 0.363 12 0.98
24 24 A 3 0 0 0 0 0 0 3 41 0 13 25 0 0 3 3 0 6 3 0 32 0 0 1.687 56 0.35
25 25 A 3 0 0 0 0 0 0 79 12 3 3 0 0 0 0 0 0 0 0 0 33 0 0 0.761 25 0.73
26 26 A 0 0 0 0 80 0 0 0 0 11 6 3 0 0 0 0 0 0 0 0 35 0 0 0.692 23 0.46
27 27 A 0 0 0 0 0 0 0 0 6 0 83 3 0 0 0 0 0 0 0 9 35 0 0 0.632 21 0.72
28 28 A 3 0 9 0 0 0 0 9 74 0 0 0 0 0 0 0 0 6 0 0 35 0 0 0.907 30 0.60
29 29 A 0 0 0 0 0 0 0 0 26 0 0 9 0 0 6 6 6 49 0 0 35 0 0 1.401 46 0.36
30 30 A 0 0 0 0 0 0 0 6 0 0 0 0 0 0 80 0 3 6 0 6 35 1 0 0.771 25 0.59
31 31 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 3 0 0 0 34 0 0 0.133 4 0.94
32 32 A 0 0 0 0 0 0 0 0 3 0 3 0 0 0 9 44 6 35 0 0 34 0 0 1.317 43 0.44
33 33 A 0 3 6 3 0 0 0 0 38 0 9 18 0 0 3 3 3 12 0 3 34 0 0 1.929 64 0.24
34 34 A 3 59 12 0 26 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 1.019 34 0.78
35 35 A 0 0 0 3 38 0 44 0 0 0 0 0 0 15 0 0 0 0 0 0 34 0 0 1.114 37 0.67
36 36 A 3 3 0 0 29 0 6 0 3 0 3 6 0 0 31 3 3 0 11 0 35 0 0 1.906 63 0.04
37 37 A 0 0 0 0 0 0 0 3 29 0 9 29 0 0 23 3 0 0 6 0 35 14 0 1.631 54 0.24
38 38 A 0 0 0 0 5 5 0 0 0 0 0 5 0 0 24 29 19 14 0 0 21 0 0 1.728 57 0.28
39 39 A 6 0 0 0 12 9 3 3 0 0 0 0 0 21 15 9 3 18 0 0 33 0 0 2.104 70 0.08
40 40 A 3 0 0 3 0 0 0 12 18 0 0 9 0 0 0 18 3 15 18 0 33 0 0 2.007 67 0.23
41 41 A 0 21 0 6 0 0 0 24 0 0 3 24 0 3 3 0 15 0 0 0 33 0 0 1.790 59 0.14
42 42 A 9 0 0 0 0 0 0 26 6 9 6 6 0 0 23 17 0 0 0 0 35 0 0 1.901 63 0.17
43 43 A 0 0 0 0 0 0 0 3 0 0 6 3 0 6 3 23 3 3 20 31 35 0 0 1.858 62 0.36
44 44 A 0 0 0 3 0 0 0 49 14 14 0 0 0 0 0 3 0 6 0 11 35 0 0 1.521 50 0.45
45 45 A 0 0 0 0 0 0 0 0 0 3 6 3 0 0 11 51 0 0 0 26 35 2 0 1.306 43 0.45
46 46 A 0 0 0 0 6 0 0 0 6 3 6 39 0 0 0 3 0 21 9 6 33 0 0 1.805 60 0.25
47 47 A 6 0 9 35 0 9 0 0 6 32 0 0 3 0 0 0 0 0 0 0 34 0 0 1.598 53 0.12
48 48 A 0 0 0 0 0 0 0 3 37 0 60 0 0 0 0 0 0 0 0 0 35 1 0 0.776 25 0.60
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 34 0 0 0.000 0 1.00
50 50 A 0 0 0 0 0 0 0 0 38 0 0 62 0 0 0 0 0 0 0 0 34 0 0 0.665 22 0.61
51 51 A 0 0 0 0 0 0 0 0 11 0 51 37 0 0 0 0 0 0 0 0 35 0 0 0.958 31 0.51
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 35 0 0 0.000 0 1.00
53 53 A 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 35 0 0 0.000 0 1.00
54 54 A 0 0 0 0 0 0 0 29 0 0 11 60 0 0 0 0 0 0 0 0 35 1 0 0.912 30 0.57
55 55 A 0 3 6 0 0 0 0 0 29 0 3 6 0 0 3 0 3 12 12 24 34 0 0 1.952 65 0.26
56 56 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 40 54 35 1 0 0.901 30 0.66
57 57 A 3 9 0 0 0 0 0 0 9 74 0 3 0 0 0 0 0 0 0 3 34 0 0 0.966 32 0.55
58 58 A 0 11 0 0 0 0 0 3 17 3 0 11 0 0 49 6 0 0 0 0 35 0 0 1.516 50 0.20
59 59 A 0 0 0 0 0 0 0 0 20 0 9 3 0 0 11 17 23 0 14 3 35 1 0 1.901 63 0.25
60 60 A 6 0 3 0 0 0 0 6 21 35 6 6 0 0 3 3 6 3 3 0 34 1 0 2.045 68 0.28
61 61 A 0 0 0 0 0 0 0 91 3 3 3 0 0 0 0 0 0 0 0 0 34 0 0 0.395 13 0.89
62 62 A 0 0 0 3 0 0 0 11 3 0 0 0 0 0 17 51 14 0 0 0 35 12 0 1.373 45 0.45
63 63 A 0 0 0 4 0 0 0 0 0 0 0 9 0 35 0 4 4 4 39 0 23 0 0 1.492 49 0.40
64 64 A 6 0 11 0 3 0 0 0 23 6 3 46 0 0 3 0 0 0 0 0 35 0 0 1.575 52 0.32
65 65 A 14 14 0 0 3 0 0 0 6 17 3 3 0 0 20 17 0 0 3 0 35 0 0 2.052 68 0.10
66 66 A 0 0 0 0 3 0 0 0 20 0 3 71 0 0 0 0 3 0 0 0 35 0 0 0.867 28 0.62
67 67 A 0 0 0 0 11 0 0 54 0 0 3 0 0 14 11 0 0 0 6 0 35 1 0 1.371 45 0.25
68 68 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 56 0 0 0 0 34 0 0 0.686 22 0.75
69 69 A 17 3 0 0 0 0 0 0 17 14 3 3 0 0 3 29 0 11 0 0 35 1 0 1.895 63 0.17
70 70 A 15 3 82 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 0.546 18 0.91
71 71 A 0 0 0 0 0 0 0 6 11 6 0 3 0 0 0 6 0 46 0 23 35 0 0 1.535 51 0.48
72 72 A 0 0 0 0 0 0 0 0 3 97 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.96
73 73 A 9 54 0 29 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.111 37 0.70
74 74 A 0 0 0 0 0 0 0 0 86 0 14 0 0 0 0 0 0 0 0 0 35 0 0 0.410 13 0.79
75 75 A 26 6 0 0 0 0 0 0 3 57 6 3 0 0 0 0 0 0 0 0 35 0 0 1.199 40 0.41
76 76 A 6 0 6 0 0 0 0 0 34 0 46 0 0 0 9 0 0 0 0 0 35 0 0 1.263 42 0.35
77 77 A 49 0 0 0 0 0 0 0 51 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.693 23 0.52
78 78 A 3 0 0 0 0 0 0 0 9 0 17 3 0 0 0 0 0 3 66 0 35 0 0 1.094 36 0.54
79 79 A 0 0 0 0 0 0 0 0 20 69 0 9 0 0 0 0 0 0 3 0 35 0 0 0.893 29 0.59
80 80 A 0 0 0 0 0 3 0 0 11 0 0 14 0 0 3 31 6 29 0 3 35 0 0 1.716 57 0.29
81 81 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 35 0 0 0.000 0 1.00
82 82 A 0 6 0 0 77 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.666 22 0.94
83 83 A 3 0 0 0 0 0 0 9 0 0 9 69 0 0 6 6 0 0 0 0 35 0 0 1.109 37 0.53
84 84 A 0 0 0 0 0 0 0 0 0 0 6 0 0 0 3 0 0 3 3 86 35 0 0 0.600 20 0.79
85 85 A 6 20 11 0 3 0 0 0 23 23 0 11 0 0 0 0 0 3 0 0 35 0 0 1.859 62 0.20
86 86 A 0 0 0 0 0 0 0 6 34 0 0 3 0 0 3 29 0 9 0 17 35 0 0 1.605 53 0.31
87 87 A 0 0 0 0 0 0 3 0 0 0 0 3 0 0 0 74 0 14 6 0 35 0 0 0.866 28 0.60
88 88 A 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.130 4 0.98
89 89 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 94 3 3 35 0 0 0.259 8 0.94
90 90 A 0 0 0 0 0 0 0 0 3 0 0 0 0 0 0 83 0 9 0 6 35 0 0 0.632 21 0.71
91 91 A 0 0 0 0 0 71 0 0 0 0 0 0 0 3 6 6 9 6 0 0 35 0 0 1.043 34 0.46
92 92 A 0 9 0 0 91 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.293 9 0.96
93 93 A 0 0 0 0 0 0 0 9 0 0 9 11 0 0 46 20 0 0 6 0 35 0 0 1.512 50 0.33
94 94 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 89 6 3 3 0 0 35 0 0 0.474 15 0.83
95 95 A 0 0 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0 0 71 17 35 0 0 0.791 26 0.69
96 96 A 0 0 0 0 9 0 0 0 0 0 0 0 91 0 0 0 0 0 0 0 35 0 0 0.293 9 0.80
97 97 A 3 0 0 3 0 0 0 0 0 3 0 3 0 0 3 23 0 0 34 29 35 0 0 1.570 52 0.38
98 98 A 0 0 0 0 0 0 0 3 0 0 3 6 0 0 0 0 0 23 6 60 35 0 0 1.174 39 0.66
99 99 A 89 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.355 11 0.93
100 100 A 3 60 3 0 17 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.114 37 0.69
101 101 A 0 0 0 0 0 0 0 66 23 0 6 0 0 0 0 0 0 3 3 0 35 0 0 0.980 32 0.67
102 102 A 0 0 0 3 0 0 0 0 6 0 0 3 0 0 89 0 0 0 0 0 35 0 0 0.474 15 0.72
103 103 A 6 0 0 0 0 0 0 0 17 0 0 0 0 0 0 0 0 66 0 11 35 0 0 0.990 33 0.58
104 104 A 0 0 0 0 0 0 0 9 0 0 0 0 91 0 0 0 0 0 0 0 35 0 0 0.293 9 0.84
105 105 A 0 0 0 0 0 0 0 0 0 0 43 57 0 0 0 0 0 0 0 0 35 0 0 0.683 22 0.58
106 106 A 0 0 0 0 0 0 0 0 77 23 0 0 0 0 0 0 0 0 0 0 35 0 0 0.538 17 0.74
107 107 A 0 11 0 0 0 0 0 0 14 0 6 0 0 0 26 0 40 3 0 0 35 0 0 1.507 50 0.23
108 108 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 91 0 6 35 0 0 0.347 11 0.93
109 109 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 94 0 0 0 0 35 0 0 0.219 7 0.95
110 110 A 0 0 0 0 0 0 0 80 20 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.500 16 0.79
111 111 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 89 35 0 0 0.355 11 0.86
112 112 A 14 3 0 0 46 14 20 0 3 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.439 48 0.58
113 113 A 3 34 63 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 0.760 25 0.76
114 114 A 0 0 3 0 0 0 0 0 29 0 29 34 0 0 0 0 6 0 0 0 35 0 0 1.348 44 0.37
115 115 A 0 0 0 0 29 37 34 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.093 36 0.88
116 116 A 6 37 34 23 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 35 0 0 1.236 41 0.69
117 117 A 0 38 4 17 0 0 0 0 8 0 17 13 0 0 0 0 4 0 0 0 24 0 0 1.697 56 0.27
118 118 A 0 0 0 0 0 0 0 13 0 0 29 42 0 0 0 4 0 4 8 0 24 0 0 1.456 48 0.40
119 119 A 0 0 5 0 0 0 0 0 0 0 0 0 0 0 0 16 53 21 5 0 19 0 0 1.267 42 0.44
120 120 A 0 0 0 0 0 0 0 0 0 0 17 33 0 0 17 17 0 0 0 17 6 0 0 1.561 52 0.13
121 121 A 0 0 0 0 0 0 0 0 0 0 0 33 0 0 17 50 0 0 0 0 6 0 0 1.011 33 0.39
122 122 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 4 0 0 0.000 0 1.00
123 123 A 0 0 0 0 0 0 0 0 0 0 25 75 0 0 0 0 0 0 0 0 4 0 0 0.562 18 0.53
124 124 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 2 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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