Complet list of 1doq hssp fileClick here to see the 3D structure Complete list of 1doq.hssp file
HSSP       HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID      1DOQ
THRESHOLD  according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE  Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT    Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman 
DATE       file generated on 2014-04-27
HEADER     TRANSFERASE                             21-DEC-99   1DOQ
COMPND     MOL_ID: 1; MOLECULE: RNA POLYMERASE ALPHA SUBUNIT; CHAIN: A; FRAGMENT:
SOURCE     MOL_ID: 1; ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; ORGANISM_TAXID: 
AUTHOR     T.WADA,T.YAMAZAKI,Y.KYOGOKU
DBREF      1DOQ A  247   315  UNP    Q9Z9H6   RPOA_THETH     247    315
SEQLENGTH    69
NCHAIN        1 chain(s) in 1DOQ data set
NALIGN       35
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM):  (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e.  entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight

## PROTEINS : identifier and alignment statistics
  NR.    ID         STRID   %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM     PROTEIN
    1 : F6DEM4_THETG        1.00  1.00    1   69  247  315   69    0    0  315  F6DEM4     DNA-directed RNA polymerase subunit alpha OS=Thermus thermophilus (strain SG0.5JP17-16) GN=rpoA PE=3 SV=1
    2 : H7GI55_9DEIN        1.00  1.00    1   69  247  315   69    0    0  315  H7GI55     DNA-directed RNA polymerase subunit alpha OS=Thermus sp. RL GN=rpoA PE=3 SV=1
    3 : H9ZPN0_THETH        1.00  1.00    1   69  247  315   69    0    0  315  H9ZPN0     DNA-directed RNA polymerase subunit alpha OS=Thermus thermophilus JL-18 GN=rpoA PE=3 SV=1
    4 : RPOA_THET2          1.00  1.00    1   69  247  315   69    0    0  315  Q72I32     DNA-directed RNA polymerase subunit alpha OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rpoA PE=3 SV=1
    5 : RPOA_THET8  1ZYR    1.00  1.00    1   69  247  315   69    0    0  315  Q5SHR6     DNA-directed RNA polymerase subunit alpha OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=rpoA PE=1 SV=1
    6 : RPOA_THETH  1SMY    1.00  1.00    1   69  247  315   69    0    0  315  Q9Z9H6     DNA-directed RNA polymerase subunit alpha OS=Thermus thermophilus GN=rpoA PE=1 SV=1
    7 : K7QTQ9_THEOS        0.96  1.00    1   69  244  312   69    0    0  312  K7QTQ9     DNA-directed RNA polymerase subunit alpha OS=Thermus oshimai JL-2 GN=rpoA PE=3 SV=1
    8 : B7A583_THEAQ        0.93  0.99    3   69  248  314   67    0    0  314  B7A583     DNA-directed RNA polymerase subunit alpha OS=Thermus aquaticus Y51MC23 GN=rpoA PE=3 SV=1
    9 : E8PP95_THESS        0.93  0.97    1   69  245  313   69    0    0  313  E8PP95     DNA-directed RNA polymerase subunit alpha OS=Thermus scotoductus (strain ATCC 700910 / SA-01) GN=rpoA PE=3 SV=1
   10 : RPOA_THEAQ  1YNJ    0.93  0.99    3   69  248  314   67    0    0  314  Q9KWU8     DNA-directed RNA polymerase subunit alpha OS=Thermus aquaticus GN=rpoA PE=1 SV=1
   11 : W2U672_9DEIN        0.93  0.97    1   69  245  313   69    0    0  313  W2U672     DNA-directed RNA polymerase subunit alpha OS=Thermus sp. NMX2.A1 GN=rpoA PE=3 SV=1
   12 : G8N9P1_9DEIN        0.91  0.99    1   69  249  317   69    0    0  317  G8N9P1     DNA-directed RNA polymerase subunit alpha OS=Thermus sp. CCB_US3_UF1 GN=rpoA PE=3 SV=1
   13 : C1CXD4_DEIDV        0.66  0.87    9   69  273  333   61    0    0  333  C1CXD4     DNA-directed RNA polymerase subunit alpha OS=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) GN=rpoA PE=3 SV=1
   14 : E4U9F7_OCEP5        0.66  0.85    9   69  262  322   61    0    0  322  E4U9F7     DNA-directed RNA polymerase subunit alpha OS=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) GN=rpoA PE=3 SV=1
   15 : E8UBV3_DEIML        0.66  0.85    8   69  260  321   62    0    0  321  E8UBV3     DNA-directed RNA polymerase subunit alpha OS=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) GN=rpoA PE=3 SV=1
   16 : RPOA_DEIGD          0.66  0.87    9   69  271  331   61    0    0  331  Q1IX99     DNA-directed RNA polymerase subunit alpha OS=Deinococcus geothermalis (strain DSM 11300) GN=rpoA PE=3 SV=1
   17 : H8GT38_DEIGI        0.65  0.87    8   69  278  339   62    0    0  339  H8GT38     DNA-directed RNA polymerase subunit alpha OS=Deinococcus gobiensis (strain DSM 21396 / JCM 16679 / CGMCC 1.7299 / I-0) GN=rpoA PE=3 SV=1
   18 : D7BCY7_MEISD        0.64  0.89    8   68  258  318   61    0    0  319  D7BCY7     DNA-directed RNA polymerase subunit alpha OS=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) GN=rpoA PE=3 SV=1
   19 : F0RJW6_DEIPM        0.62  0.85    5   69  264  328   65    0    0  328  F0RJW6     DNA-directed RNA polymerase subunit alpha OS=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) GN=rpoA PE=3 SV=1
   20 : F2NMP9_MARHT        0.62  0.80    1   69  249  317   69    0    0  317  F2NMP9     DNA-directed RNA polymerase subunit alpha OS=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) GN=rpoA PE=3 SV=1
   21 : L0A3N7_DEIPD        0.62  0.82    4   69  258  323   66    0    0  323  L0A3N7     DNA-directed RNA polymerase subunit alpha OS=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) GN=rpoA PE=3 SV=1
   22 : D3PN14_MEIRD        0.59  0.88    6   69  258  321   64    0    0  321  D3PN14     DNA-directed RNA polymerase subunit alpha OS=Meiothermus ruber (strain ATCC 35948 / DSM 1279 / VKM B-1258 / 21) GN=rpoA PE=3 SV=1
   23 : D7CVG5_TRURR        0.59  0.82    2   69  243  310   68    0    0  310  D7CVG5     DNA-directed RNA polymerase subunit alpha OS=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) GN=rpoA PE=3 SV=1
   24 : RPOA_DEIRA          0.59  0.84    2   69  274  341   68    0    0  341  Q9RSJ6     DNA-directed RNA polymerase subunit alpha OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=rpoA PE=3 SV=1
   25 : B9CMR2_9ACTN        0.46  0.72    1   68  245  312   68    0    0  313  B9CMR2     DNA-directed RNA polymerase subunit alpha OS=Atopobium rimae ATCC 49626 GN=rpoA PE=3 SV=1
   26 : C8W7X1_ATOPD        0.46  0.72    1   68  245  312   68    0    0  313  C8W7X1     DNA-directed RNA polymerase subunit alpha OS=Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) GN=rpoA PE=3 SV=1
   27 : S3ALU1_9ACTN        0.46  0.72    1   68  245  312   68    0    0  313  S3ALU1     DNA-directed RNA polymerase subunit alpha OS=Atopobium sp. oral taxon 199 str. F0494 GN=rpoA PE=3 SV=1
   28 : C4F9Q8_9ACTN        0.45  0.72    2   68  246  312   67    0    0  313  C4F9Q8     DNA-directed RNA polymerase subunit alpha OS=Collinsella intestinalis DSM 13280 GN=rpoA PE=3 SV=1
   29 : B5YDX0_DICT6        0.43  0.72    2   69  241  308   68    0    0  324  B5YDX0     DNA-directed RNA polymerase subunit alpha OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rpoA PE=3 SV=1
   30 : B8E1G0_DICTD        0.43  0.74    2   69  241  308   68    0    0  321  B8E1G0     DNA-directed RNA polymerase subunit alpha OS=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) GN=rpoA PE=3 SV=1
   31 : R6H4U2_9ACTN        0.43  0.70   11   66  544  599   56    0    0  686  R6H4U2     DNA-directed RNA polymerase OS=Eggerthella sp. CAG:209 GN=BN534_00578 PE=3 SV=1
   32 : K1Y248_9BACT        0.39  0.71    7   65  248  306   59    0    0  307  K1Y248     DNA-directed RNA polymerase subunit alpha OS=uncultured bacterium GN=rpoA PE=3 SV=1
   33 : V5RS32_9BACT        0.39  0.71    7   65  248  306   59    0    0  307  V5RS32     DNA-directed RNA polymerase subunit alpha OS=candidate division WWE3 bacterium RAAC2_WWE3_1 GN=rpoA PE=3 SV=1
   34 : I7LIX0_9CLOT        0.38  0.65    1   68  244  311   68    0    0  315  I7LIX0     DNA-directed RNA polymerase subunit alpha OS=Caloramator australicus RC3 GN=rpoA PE=3 SV=1
   35 : M1E6T0_9FIRM        0.37  0.68    1   68  262  329   68    0    0  341  M1E6T0     DNA-directed RNA polymerase subunit alpha (Precursor) OS=Thermodesulfobium narugense DSM 14796 GN=rpoA PE=3 SV=1
## ALIGNMENTS    1 -   35
 SeqNo  PDBNo AA STRUCTURE BP1 BP2  ACC NOCC  VAR  ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
     1  247 A E              0   0  199   17   41  EEEEEEE E EE       E    QEQ      KQ
     2  248 A Q        +     0   0  167   22   65  QQQQQQK G GK       A  RDDDDDEE   KA
     3  249 A E        +     0   0   58   24   46  EEEEEEEEEEEE       A  AQDDDNEE   DK
     4  250 A E  S    S+     0   0  169   25   57  EEEEEEEEEEEE       EE EDSSSAEE   KM
     5  251 A E  S    S-     0   0  157   26   61  EEEEEEEDDDDD      ERP PTEEEEKK   VD
     6  252 A L        +     0   0    7   27   65  LLLLLLLLLLLL      PPPVAPLLLLKK   LL
     7  253 A D        +     0   0  109   29   48  DDDDDDDDDDDD      SAKGRRDEDDGG DDEE
     8  254 A L        -     0   0   55   32   61  LLLLLLLLLLLL  V VLVLVLIVKKKKLL VVMQ
     9  255 A P    >>  -     0   0   40   35   71  PPPPPPPPPPPPTATTTTSTTTSTQQQQTT AATS
    10  256 A L  H 3>>S+     0   0    1   35   25  LLLLLLLLLLLLLLLLLLLLLLLLVVVILL VVII
    11  257 A E  H 345S+     0   0  107   36   11  EEEEEEEEEEEEEEEEEDEDEDEEEEEEEEDDDEE
    12  258 A E  H <45S+     0   0  123   36   37  EEEEEEEEEEEEGDGGGDGDGDSGDDDDDDDEEEE
    13  259 A L  H  <5S-     0   0   38   36    3  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLI
    14  260 A G  T  <5 +     0   0   56   36   32  GGGGGGGGGGGGGGGGGGGGGGEGDDDDGGGPPDG
    15  261 A L      < -     0   0   11   36    3  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLL
    16  262 A S    >>  -     0   0   14   36   53  SSSSSSSSSSSSTSTTTTTSTTSTSSSSSSSQQSQ
    17  263 A T  H 3> S+     0   0  115   36   42  TTTTTTTTTTTTTTTTTTTTTTSTVVVVTTQTTQT
    18  264 A R  H 3> S+     0   0  177   36    0  RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
    19  265 A V  H <>>S+     0   0    0   36   66  VVVVVVVVVVVVVVVVVVVVVVVVSSSSAAWTTAI
    20  266 A L  H  X5S+     0   0   43   36   52  LLLLLLLLLLLLLLLLLLLLLLLLYYYYYYAIIFA
    21  267 A H  H  X5S+     0   0  132   36   41  HHHHHHHHHHHHHHHHHHHHHHHHNNNNNNNNNNN
    22  268 A S  H  X5S+     0   0   24   36   55  SSSSSSSSSSSSSNSSSNSNSNSSCCCCSSKAACV
    23  269 A L  H ><>S+     0   0    0   36    1  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLL
    24  270 A K  H >X S-     0   0   28   36   39  SSSSSSSSSSSSSSSSSSNSSSSSSSSSTTTTTTT
    31  277 A V  H  > S+     0   0    0   36   15  VVVVVVVVVVVVVVVVVVVIVVVVVVVVIIVLLVL
    32  278 A R  H  > S+     0   0  150   36   73  RRRRRRRRRRRRDADDDEDEDEDDRRRREEAKKGG
    33  279 A A  H  > S+     0   0   22   36   63  AAAAAAAAAAAAANAAASANASAAQQQQDDDQQDD
    34  280 A L  H  < S+     0   0    0   36    0  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
    35  281 A L  H  < S+     0   0   40   36   72  LLLLLLLLLLLLCTCCCLCLCLLCVVVVLLVAAVI
    36  282 A A  H  < S+     0   0   47   36   56  AAAAAAAAAAAAAAAAAAAAAAAADDDESSGKKQS
    37  283 A L  S  < S-     0   0    5   36   60  LLLLLLLLLLLLLLLLLLLLLLLLFFFFKKHKKKK
    38  284 A N    >>  -     0   0   75   36   59  NNNNNNNNNNNNSTSSSSSTSSSSSSSSTSTSSTT
    39  285 A L  H 3> S+     0   0  109   36   85  LLLLLLLLLLLLDEDDDEDEDEEDEEEERREDDER
    40  286 A K  H 34 S+     0   0  191   36   67  KKKKKKKKKKKKRRRRRRRRRKRRNNNNEEDDDEE
    41  287 A D  H <> S+     0   0   54   36   12  DDDDDDDDDDDDDEDDDEDEDEDDDDDDEDDEEDD
    42  288 A L  H  < S+     0   0    3   36   10  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIILI
    43  289 A K  T  < S+     0   0  166   36   74  KKKKKKKRKRKKKKKKKKKKKRKKLLLLMMLAAML
    44  290 A N  T  4 S+     0   0  113   36   53  NNNNNNNNNNNNKKKKKKKKKRKKNNNNKKRDDRN
    45  291 A I  S >< S-     0   0    4   36   14  IIIIIIIIIIIIVVVVVVVVVVVVIIIIIIIIIVV
    46  292 A P  T 3  S+     0   0  128   36   57  PPPPPPPPPPPPPPPPPPPPPPGPRRRRKKEKKRP
    47  293 A G  T 3  S+     0   0   29   36   43  GGGGGGGGGGGGGGGGGGGGGGGGNNNNNNGNNNS
    48  294 A I    <   +     0   0   23   36   32  IIIIIIIIIIIIIIIIIIIIIIVIFFFFFFILLLF
    49  295 A G    >>  -     0   0   40   36    0  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    50  296 A E  H 3> S+     0   0  169   36   56  EEEEEEEEEEEEEEEEEEEEEDDEVVVVQQTEEKK
    51  297 A R  H 3> S+     0   0  178   36   29  RRRRRRRRRRRRRRRRRRRRRRKRKKKKKKKKKKK
    52  298 A S  H <> S+     0   0    0   36    5  SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASSSS
    53  299 A L  H  X S+     0   0   58   36   19  LLLLLLLLLLLLLVLLLLLVLLLLIIIILLILLLL
    54  300 A E  H  X S+     0   0  109   36   23  EEEEEEEEEEEEDEDDDQDEDQEDEEEEQQEEEED
    55  301 A E  H  X S+     0   0   33   36    0  EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
    56  302 A I  H >X S+     0   0    0   36   21  IIIIIIIIIIIIIIIIIIIIIIIIVVVVLLLIIVL
    57  303 A K  H 3X S+     0   0   94   36   32  KKKKKKRRRRRRKKKKKKKKKKKKKKKKEEKKKQE
    58  304 A E  H >X S+     0   0  108   36   39  EEEEEEEQEQEEQEAQQDQEADEQEEEDEEEKKQE
    59  305 A A  H XX S+     0   0    6   36   90  AAAAAAAAAAAAQRQQQIQRQCRQKKKKKKGLLKI
    60  306 A L  H 3X S+     0   0    5   36    0  LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
    61  307 A E  H << S+     0   0  134   36   66  EEEEEEEAAAAAAAAAAAAAAAQAEEEERREKKEH
    62  308 A K  H << S+     0   0  162   36   71  KKKKKKKKKKKKQAQQQQQEQQAQASASEEKKKSA
    63  309 A K  H  < S-     0   0   55   36   90  KKKKKKRKKKKRFLFFFHFHFHQFMMMMKKHEELK
    64  310 A G     <  +     0   0   55   36    0  GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
    65  311 A F        -     0   0   27   36   20  FFFFFFFFFFFFLLLLLLKLLLLLLLLLLLLLLFY
    66  312 A T        +     0   0   93   34   72  TTTTTTTTATAAAASAAEASAVYASSSSSSS  SR
    67  313 A L  S    S+     0   0   79   33    1  LLLLLLLLLLLLLLLLLMLLLMLLLLLLLL   LL
    68  314 A K              0   0   13   33   17  KKKKKKKKKKKKRKKRRKRKRKKRKKKKKR   KK
    69  315 A E              0   0  161   26   22  EEEEEEEEEEEEDEDDD DEDDED    DD     
## SEQUENCE PROFILE AND ENTROPY
 SeqNo PDBNo   V   L   I   M   F   W   Y   G   A   P   S   T   C   H   R   K   Q   E   N   D  NOCC NDEL NINS ENTROPY RELENT WEIGHT
    1  247 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   6  18  76   0   0    17    0    0   0.678     22  0.58
    2  248 A   0   0   0   0   0   0   0   9   9   0   0   0   0   0   5  14  32   9   0  23    22    0    0   1.767     58  0.35
    3  249 A   0   0   0   0   0   0   0   0   8   0   0   0   0   0   0   4   4  63   4  17    24    0    0   1.197     39  0.53
    4  250 A   0   0   0   4   0   0   0   0   4   0  12   0   0   0   0   4   0  72   0   4    25    0    0   1.006     33  0.43
    5  251 A   4   0   0   0   0   0   0   0   0   8   0   4   0   0   4   8   0  50   0  23    26    0    0   1.456     48  0.39
    6  252 A   4  70   0   0   0   0   0   0   4  15   0   0   0   0   0   7   0   0   0   0    27    0    0   0.967     32  0.35
    7  253 A   0   0   0   0   0   0   0  10   3   0   3   0   0   0   7   3   0  10   0  62    29    0    0   1.298     43  0.52
    8  254 A  22  56   3   3   0   0   0   0   0   0   0   0   0   0   0  13   3   0   0   0    32    0    0   1.241     41  0.39
    9  255 A   0   0   0   0   0   0   0   0   9  37   9  34   0   0   0   0  11   0   0   0    35    0    0   1.404     46  0.28
   10  256 A  14  77   9   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    35    0    0   0.689     22  0.75
   11  257 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  83   0  17    36    0    0   0.451     15  0.88
   12  258 A   0   0   0   0   0   0   0  19   0   0   3   0   0   0   0   0   0  47   0  31    36    0    0   1.135     37  0.63
   13  259 A   0  97   3   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.127      4  0.96
   14  260 A   0   0   0   0   0   0   0  78   0   6   0   0   0   0   0   0   0   3   0  14    36    0    0   0.730     24  0.67
   15  261 A   3  97   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.127      4  0.96
   16  262 A   0   0   0   0   0   0   0   0   0   0  67  25   0   0   0   0   8   0   0   0    36    0    0   0.824     27  0.47
   17  263 A  11   0   0   0   0   0   0   0   0   0   3  81   0   0   0   0   6   0   0   0    36    0    0   0.678     22  0.57
   18  264 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0   0   0   0    36    0    0   0.000      0  1.00
   19  265 A  69   0   3   0   0   3   0   0   8   0  11   6   0   0   0   0   0   0   0   0    36    0    0   1.064     35  0.33
   20  266 A   0  69   6   0   3   0  17   0   6   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.973     32  0.48
   21  267 A   0   0   0   0   0   0   0   0   0   0   0   0   0  69   0   0   0   0  31   0    36    0    0   0.615     20  0.59
   22  268 A   3   0   0   0   0   0   0   0   6   0  64   0  14   0   0   3   0   0  11   0    36    0    0   1.164     38  0.44
   23  269 A   0  97   0   0   3   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.127      4  0.98
   24  270 A   0   0   0   0   0   0   0   0   0   0   3   0   0   0   8  86   3   0   0   0    36    0    0   0.535     17  0.81
   25  271 A   0   0   0   0   0   0   0   0   0   0   0   0   0   6  17   6   0  72   0   0    36    0    0   0.855     28  0.44
   26  272 A   0   0   0   0   0   0   0   0  22   0   3   0   0   6   0   0   0  69   0   0    36    0    0   0.848     28  0.45
   27  273 A   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   28  274 A   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   29  275 A   0   0   0   0   0   0   0   0   0   0   3   0   0  17   0   0   0  44   3  33    36    0    0   1.224     40  0.51
   30  276 A   0   0   0   0   0   0   0   0   0   0  78  19   0   0   0   0   0   0   3   0    36    0    0   0.613     20  0.61
   31  277 A  83   8   8   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.566     18  0.85
   32  278 A   0   0   0   0   0   0   0   6   6   0   0   0   0   0  47   6   0  14   0  22    36    0    0   1.444     48  0.26
   33  279 A   0   0   0   0   0   0   0   0  58   0   6   0   0   0   0   0  17   0   6  14    36    0    0   1.208     40  0.36
   34  280 A   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   35  281 A  17  53   3   0   0   0   0   0   6   0   0   3  19   0   0   0   0   0   0   0    36    0    0   1.314     43  0.27
   36  282 A   0   0   0   0   0   0   0   3  69   0   8   0   0   0   0   6   3   3   0   8    36    0    0   1.127     37  0.43
   37  283 A   0  69   0   0  11   0   0   0   0   0   0   0   0   3   0  17   0   0   0   0    36    0    0   0.896     29  0.39
   38  284 A   0   0   0   0   0   0   0   0   0   0  47  17   0   0   0   0   0   0  36   0    36    0    0   1.021     34  0.40
   39  285 A   0  36   0   0   0   0   0   0   0   0   0   0   0   0   8   0   0  31   0  25    36    0    0   1.284     42  0.14
   40  286 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0  31  39   0  11  11   8    36    0    0   1.425     47  0.33
   41  287 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  19   0  81    36    0    0   0.493     16  0.87
   42  288 A   0  92   8   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.287      9  0.89
   43  289 A   0  17   0   8   0   0   0   0   6   0   0   0   0   0   8  61   0   0   0   0    36    0    0   1.174     39  0.26
   44  290 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   8  36   0   0  50   6    36    0    0   1.082     36  0.47
   45  291 A  39   0  61   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.668     22  0.85
   46  292 A   0   0   0   0   0   0   0   3   0  69   0   0   0   0  14  11   0   3   0   0    36    0    0   0.971     32  0.43
   47  293 A   0   0   0   0   0   0   0  72   0   0   3   0   0   0   0   0   0   0  25   0    36    0    0   0.681     22  0.57
   48  294 A   3   8  69   0  19   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.878     29  0.68
   49  295 A   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   50  296 A  11   0   0   0   0   0   0   0   0   0   0   3   0   0   0   6   6  69   0   6    36    0    0   1.079     36  0.43
   51  297 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0  67  33   0   0   0   0    36    0    0   0.637     21  0.71
   52  298 A   0   0   0   0   0   0   0   0   3   0  97   0   0   0   0   0   0   0   0   0    36    0    0   0.127      4  0.94
   53  299 A   6  81  14   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.609     20  0.81
   54  300 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  11  67   0  22    36    0    0   0.849     28  0.76
   55  301 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0 100   0   0    36    0    0   0.000      0  1.00
   56  302 A  14  11  75   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.734     24  0.79
   57  303 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0  17  72   3   8   0   0    36    0    0   0.840     28  0.67
   58  304 A   0   0   0   0   0   0   0   0   6   0   0   0   0   0   0   6  22  58   0   8    36    0    0   1.177     39  0.60
   59  305 A   0   6   6   0   0   0   0   3  36   0   0   0   3   0   8  19  19   0   0   0    36    0    0   1.732     57  0.10
   60  306 A   0 100   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   61  307 A   0   0   0   0   0   0   0   0  44   0   0   0   0   3   6   6   3  39   0   0    36    0    0   1.248     41  0.34
   62  308 A   0   0   0   0   0   0   0   0  14   0   8   0   0   0   0  44  25   8   0   0    36    0    0   1.395     46  0.29
   63  309 A   0   6   0  11  19   0   0   0   0   0   0   0   0  11   6  39   3   6   0   0    36    0    0   1.755     58  0.10
   64  310 A   0   0   0   0   0   0   0 100   0   0   0   0   0   0   0   0   0   0   0   0    36    0    0   0.000      0  1.00
   65  311 A   0  56   0   0  39   0   3   0   0   0   0   0   0   0   0   3   0   0   0   0    36    0    0   0.893     29  0.79
   66  312 A   3   0   0   0   0   0   3   0  29   0  29  29   0   0   3   0   0   3   0   0    34    0    0   1.495     49  0.27
   67  313 A   0  94   0   6   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0    33    0    0   0.229      7  0.98
   68  314 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0  21  79   0   0   0   0    33    0    0   0.517     17  0.82
   69  315 A   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0   0  62   0  38    26    0    0   0.666     22  0.78
## INSERTION LIST
 AliNo  IPOS  JPOS   Len Sequence
//