Complet list of 1de2 hssp file
Complete list of 1de2.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1DE2
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-12
HEADER ELECTRON TRANSPORT 12-NOV-99 1DE2
COMPND MOL_ID: 1; MOLECULE: GLUTAREDOXIN; CHAIN: A; OTHER_DETAILS: REDUCED
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE T4; ORGANISM_TAXI
AUTHOR Y.WANG,D.S.WISHART
DBREF 1DE2 A 1 87 UNP P00276 GLRX_BPT4 1 87
SEQLENGTH 87
NCHAIN 1 chain(s) in 1DE2 data set
NALIGN 48
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : C3V1E6_9CAUD 1.00 1.00 1 87 1 87 87 0 0 87 C3V1E6 Thioredoxin OS=Enterobacteria phage RB14 GN=nrdC PE=4 SV=1
2 : C3V274_BPR51 1.00 1.00 1 87 1 87 87 0 0 87 C3V274 Thioredoxin OS=Enterobacteria phage RB51 GN=nrdC PE=4 SV=1
3 : D9IEB8_BPT4 1.00 1.00 1 87 1 87 87 0 0 87 D9IEB8 Thioredoxin OS=Enterobacteria phage T4 GN=nrdC PE=4 SV=1
4 : F2VXA6_9CAUD 1.00 1.00 1 87 1 87 87 0 0 87 F2VXA6 Putative NrdC thioredoxin OS=Shigella phage Shfl2 GN=Shfl2p086 PE=4 SV=1
5 : G0X5K8_9CAUD 1.00 1.00 1 87 1 87 87 0 0 87 G0X5K8 Thioredoxin OS=Escherichia phage wV7 PE=4 SV=1
6 : GLRX_BPT4 1DE1 1.00 1.00 1 87 1 87 87 0 0 87 P00276 Glutaredoxin OS=Enterobacteria phage T4 GN=NRDC PE=1 SV=1
7 : I6ZY60_9VIRU 1.00 1.00 1 87 1 87 87 0 0 87 I6ZY60 Uncharacterized protein OS=Escherichia phage ECML-134 GN=ECML134_082 PE=4 SV=1
8 : I7LHH0_9CAUD 1.00 1.00 1 87 1 87 87 0 0 87 I7LHH0 Thioredoxin, phage-associated OS=Yersinia phage phiD1 GN=g088 PE=4 SV=1
9 : S5MKV9_9CAUD 1.00 1.00 1 87 1 87 87 0 0 87 S5MKV9 Thioredoxin OS=Yersinia phage PST GN=nrdC PE=4 SV=1
10 : D4Z9N3_BPAR1 0.99 0.99 1 87 1 87 87 0 0 87 D4Z9N3 NrdC thioredoxin OS=Enterobacteria phage AR1 GN=nrdC PE=4 SV=1
11 : G1FH13_9CAUD 0.99 1.00 1 87 1 87 87 0 0 87 G1FH13 Phage-associated thioredoxin OS=Enterobacteria phage ime09 GN=nrdC PE=4 SV=1
12 : K4FBY8_9CAUD 0.99 0.99 1 87 1 87 87 0 0 87 K4FBY8 Thioredoxin OS=Enterobacteria phage vB_EcoM_ACG-C40 GN=ACG-C40_0083 PE=4 SV=1
13 : Q06EP3_BPR32 0.99 0.99 1 87 1 87 87 0 0 87 Q06EP3 Thioredoxin OS=Enterobacteria phage RB32 GN=nrdC PE=4 SV=1
14 : K0G0E5_9CAUD 0.98 0.99 1 87 1 87 87 0 0 87 K0G0E5 Uncharacterized protein OS=Enterobacteria phage HX01 GN=HX01_090 PE=4 SV=1
15 : Q7Y550_BPR69 0.92 0.98 1 87 6 92 87 0 0 92 Q7Y550 NrdC thioredoxin OS=Enterobacteria phage RB69 GN=nrdC PE=4 SV=1
16 : E3SFH7_9CAUD 0.87 0.95 1 87 1 87 87 0 0 87 E3SFH7 Thioredoxin OS=Shigella phage SP18 GN=nrdC PE=4 SV=1
17 : K4I619_9CAUD 0.87 0.97 1 87 1 87 87 0 0 87 K4I619 Thioredoxin OS=Salmonella phage STML-198 PE=4 SV=1
18 : M1EB73_9CAUD 0.87 0.97 1 87 1 87 87 0 0 87 M1EB73 Thioredoxin OS=Salmonella phage S16 PE=4 SV=1
19 : C4MZH5_9CAUD 0.85 0.95 1 87 1 87 87 0 0 87 C4MZH5 NrdC thioredoxin OS=Enterobacteria phage JS10 GN=nrdC PE=4 SV=1
20 : D7RM91_9CAUD 0.85 0.95 1 87 1 87 87 0 0 87 D7RM91 NrdC thioredoxin OS=Enterobacteria phage IME08 GN=nrdC PE=4 SV=1
21 : G3MUT1_9CAUD 0.85 0.95 1 87 1 87 87 0 0 87 G3MUT1 Thioredoxin OS=Enterobacteria phage Bp7 GN=nrdC PE=4 SV=1
22 : Q5QC19_9CAUD 0.85 0.95 1 87 1 87 87 0 0 87 Q5QC19 NrdC thioredoxin OS=Enterobacteria phage JS98 GN=nrdC PE=4 SV=1
23 : E5FIT2_9CAUD 0.84 0.97 1 87 1 87 87 0 0 87 E5FIT2 NrdC thioredoxin OS=Enterobacteria phage vB_EcoM-VR7 GN=nrdC PE=4 SV=1
24 : I7K2Y3_9CAUD 0.56 0.71 1 87 1 90 91 2 5 90 I7K2Y3 Thioredoxin, phage-associated OS=Yersinia phage phiR1-RT GN=g082 PE=4 SV=1
25 : E5DI86_9CAUD 0.49 0.73 2 87 3 93 91 1 5 93 E5DI86 Thioredoxin OS=Enterobacteria phage CC31 GN=nrdC PE=4 SV=1
26 : E5E498_9CAUD 0.46 0.69 1 86 1 89 90 2 5 93 E5E498 NrdC thioredoxin OS=Acinetobacter phage Acj61 GN=nrdC PE=4 SV=1
27 : W0B4E6_9CAUD 0.46 0.70 1 86 1 88 89 2 4 91 W0B4E6 Thioredoxin OS=Acinetobacter phage ZZ1 GN=nrdC PE=4 SV=1
28 : M9UVL3_9CAUD 0.45 0.64 1 87 1 88 92 3 9 90 M9UVL3 Product NrdC thioredoxin OS=Escherichia phage Lw1 GN=nrdC PE=4 SV=1
29 : K7NQ29_9CAUD 0.38 0.61 1 87 1 88 92 2 9 91 K7NQ29 Thioredoxin OS=Klebsiella phage KP27 GN=nrdC PE=4 SV=1
30 : D9ICV3_9CAUD 0.37 0.55 1 87 1 88 92 2 9 90 D9ICV3 NrdC thioredoxin OS=Enterobacteria phage RB16 GN=nrdC PE=4 SV=1
31 : K4F9Z1_9CAUD 0.37 0.56 1 87 1 87 91 2 8 89 K4F9Z1 Thioredoxin OS=Cronobacter phage vB_CsaM_GAP161 GN=GAP161_240 PE=4 SV=1
32 : D5JFR3_9CAUD 0.36 0.58 1 87 1 88 92 2 9 91 D5JFR3 NrdC thioredoxin OS=Klebsiella phage KP15 GN=215 PE=4 SV=1
33 : K0NZX4_9CAUD 0.36 0.57 1 87 1 88 88 1 1 90 K0NZX4 Uncharacterized protein OS=Enterobacteria phage RB43 PE=4 SV=1
34 : U1KL73_9GAMM 0.36 0.49 14 87 11 80 80 6 16 87 U1KL73 Glutaredoxin 1 OS=Pseudoalteromonas rubra ATCC 29570 GN=grxA PE=4 SV=1
35 : A7XF11_9CAUD 0.35 0.56 12 85 10 85 79 3 8 93 A7XF11 NrdC thioredoxin OS=Enterobacteria phage Phi1 GN=nrdC PE=4 SV=1
36 : C4MYN3_9CAUD 0.35 0.56 12 85 10 85 79 3 8 93 C4MYN3 Thioredoxin OS=Enterobacteria phage JSE GN=nrdC PE=4 SV=1
37 : Q7Y462_9CAUD 0.35 0.56 12 85 10 85 79 3 8 93 Q7Y462 Thioredoxin OS=Enterobacteria phage RB49 GN=nrdC PE=4 SV=1
38 : Q56BE1_9CAUD 0.34 0.53 1 87 1 88 92 2 9 90 Q56BE1 NrdC thioredoxin OS=Enterobacteria phage RB43 GN=nrdC PE=4 SV=1
39 : V4HD70_9GAMM 0.33 0.49 14 87 11 80 76 5 8 87 V4HD70 Glutaredoxin, GrxA family OS=Pseudoalteromonas luteoviolacea 2ta16 GN=PL2TA16_02124 PE=4 SV=1
40 : Q6RHV6_9CAUD 0.32 0.56 1 86 1 88 91 5 8 89 Q6RHV6 NrdC thioredoxin OS=Aeromonas phage 65 GN=nrdC PE=4 SV=1
41 : V9LZH3_9VIRU 0.32 0.51 1 84 1 84 88 3 8 99 V9LZH3 Glutaredoxin OS=Vibrio phage VH7D PE=4 SV=1
42 : D7DN17_METS0 0.31 0.45 1 84 1 72 85 4 14 85 D7DN17 Glutaredoxin 3 OS=Methylotenera sp. (strain 301) GN=M301_0572 PE=4 SV=1
43 : K2KA10_9GAMM 0.31 0.46 3 86 6 77 84 4 12 243 K2KA10 Uncharacterized protein OS=Idiomarina xiamenensis 10-D-4 GN=A10D4_08037 PE=4 SV=1
44 : K7NS27_9CAUD 0.31 0.57 2 86 3 90 89 3 5 93 K7NS27 Glutaredoxin OS=Klebsiella phage KP27 GN=nrdH PE=4 SV=1
45 : Q76Z53_9CAUD 0.31 0.53 1 83 1 83 86 4 6 90 Q76Z53 NrdC thioredoxin OS=Aeromonas phage Aeh1 GN=nrdC PE=4 SV=1
46 : D5JFS7_9CAUD 0.30 0.57 2 86 3 90 89 3 5 93 D5JFS7 NrdH OS=Klebsiella phage KP15 GN=229 PE=4 SV=1
47 : I6XLM1_9CAUD 0.30 0.53 1 85 1 87 90 4 8 89 I6XLM1 Thioredoxin OS=Aeromonas phage CC2 GN=nrdC PE=4 SV=1
48 : Q56BC4_9CAUD 0.30 0.56 4 86 5 90 87 3 5 92 Q56BC4 NrdH OS=Enterobacteria phage RB43 GN=nrdH PE=4 SV=1
## ALIGNMENTS 1 - 48
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 102 39 0 MMMMMMMMMMMMMMMMMMMMMMMM MMMMMMMM M MMM M M
2 2 A F E -a 31 0A 8 42 29 FFFFFFFFFFFFFFFFFFFFFFFFFIYFFFFFF F ILA ILII
3 3 A K E -aB 32 69A 59 43 44 KKKKKKKKKKKKKKKKKKKKKKKIKTQKKKKKK K TEKKEEET
4 4 A V E -aB 33 68A 6 44 19 VVVVVVVVVVVVVVVVVVVVVVVIVIIIIIIII I IIVLIVIII
5 5 A Y E +aB 34 67A 8 44 10 YYYYYYYYYYYYYYYYFFYYYYYYFYYYFYYFY Y FFTYYYYFY
6 6 A G E S-a 35 0A 1 44 15 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG G GGMRGGGGG
7 7 A Y - 0 0 12 44 27 YYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYY Y FWYMIFIFI
8 8 A D + 0 0 72 43 74 DDDDDDDDDDDDDDDDDDDDDDDDDLLIIIIII I DD.VPDPDP
9 9 A S B > S-D 12 0B 78 43 65 SSSSSSSSSSSSSSSSSSSSSSSESPPPPPPPP P PE.TEPEPE
10 10 A N T 3 S+ 0 0 168 44 65 NNNNNNNNNNSNNSTNNNNNNNSHKEESSSSSS S DSSDSLSDN
11 11 A I T 3 S+ 0 0 58 44 58 IIIIIIIIIIIIIIIIIIIIIIIIHIIVVVVVV V NDTELELNI
12 12 A H B < S-D 9 0B 72 47 61 HHHHHHHHHHHHHHHHHHHHHHHHFQQYYYYYY YYYY YFAHHLHYH
13 13 A K + 0 0 160 47 55 KKKKKKKKKKKKKKKRKKRRRRRKKKKNNNNNN NNNN KRVIKEKKK
14 14 A C + 0 0 45 49 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
15 15 A V S >> S+ 0 0 73 49 80 VVVVVVVVVVVVVVIVVVVVVVVVVIIAAAAAAPKKKAPKVPPYKYVY
16 16 A Y H 3> S+ 0 0 115 49 96 YYYYYYYYYYYYYYYFFFFFFFFPPNNPPPPPPYYYYPYPPYYGPGPG
17 17 A C H 3> S+ 0 0 16 49 4 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCGCCCCC
18 18 A D H <> S+ 0 0 131 49 86 DDDDDDDDDDDDDDDDDDDDDDDIIDDLLLLLLVQQQLVILILILIII
19 19 A N H X S+ 0 0 53 49 41 NNNNNNNNNNNNNNNNNNNNNNNNNGSNNNNNNRNNNNRKKNRENEKE
20 20 A A H X S+ 0 0 10 49 28 AAAAAAAAAAAAAAAAAAAAAAAASAASSSSSSAAAACAAAASAAAAA
21 21 A K H X S+ 0 0 117 49 13 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKkKKKKKKKEKRKRKQ
22 22 A R H X S+ 0 0 189 48 21 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRrRRRRE.RRDKRKKK
23 23 A L H X S+ 0 0 6 49 2 LLLLLLLLLLLLLLLLLLLLLLFLLLLLLLLLLLLLLLLMLLLLLLFL
24 24 A L H X>S+ 0 0 3 49 54 LLLLLLLLLLLLLLLLLLLLLLLLLCCLLLLLLTCCCLALALLLLLAL
25 25 A T H <5S+ 0 0 74 49 58 TTTTTTTTTTTTTTTDNDDDDDDADTTDDDDDDTEEEDTAETKDDDDN
26 26 A V H <5S+ 0 0 85 49 81 VVVVVVVVVVVVVVVVVVVVVVVTAAAAAAAAAEASAARETSREVETE
27 27 A K H <5S- 0 0 71 49 37 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRRRRKLSRKEHRHKK
28 28 A K T <5 + 0 0 169 49 47 KKKKKKKKKKKKKKKKKKKKKKKKRKKKRKKRKdKKKKkrGgGGGGKG
29 29 A Q < - 0 0 91 48 86 QQQQQQQQQQQQQQQQQQQQQQQKKRKHKHHKHfIIIHeiLt.LVLLI
30 30 A P + 0 0 80 48 68 PPPPPPPPPPPPPPPPPPPPPPPEDEEEEEPEEKPPPERDID.ENEDE
31 31 A F E -a 2 0A 52 49 15 FFFFFFFFFFFFFFFYYYYYYYYFYFFYYYYYYFYYYYDFFIYYYYYY
32 32 A E E -a 3 0A 106 49 45 EEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEERIIIEDEDNEEVEVH
33 33 A F E -a 4 0A 37 49 14 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYYYYFFFFKVFFFFF
34 34 A I E -a 5 0A 24 49 50 IIIIIIIIIIIIIIIIIIIIIIIIIVIVVLVVVIIIIVNKIVEYLYKY
35 35 A N E -a 6 0A 62 49 74 NNNNNNNNNNNNNNNNNNNNNNNSSSSSSSSSSDPPPSFPPRDSPSPP
36 36 A I S S+ 0 0 6 49 29 IIIIIIIIIIIIIIVVIIVVVVVVVLIVVVVVVIVVVVRILIHVIVIV
37 37 A M + 0 0 15 49 78 MMMMMMMMMMMMMMMMMMMMMMMVTAAAAAAAAINNNAYLADPLALLL
38 38 A P + 0 0 74 49 84 PPPPPPPPPLPPPPPPPPPPPPPISDDDDDDDDKDDDDIKKLLKKKKK
39 39 A E B > S-E 42 0C 111 49 61 EEEEEEEEEEEEEKEEEEEEEEEngsssesseSegggsDeeQTpIpTe
40 40 A K T 3 S- 0 0 189 44 58 KKKKKKKKKKKKKKKKKKKKKKKgtghkkkkkKvrrrk.ea..s.s.d
41 41 A G T 3 S+ 0 0 48 47 65 GGGGGGGGGGGGGGGGGGGGGGGPPPGPPPPPGSPPPP.SHP.VSVGL
42 42 A V B < -E 39 0C 73 47 63 VVVVVVVVVVVVVVVVVVVVVVVVIVPIIIVIEKVVVI.RKE.GKGTG
43 43 A F - 0 0 122 48 68 FFFFFFFFFFFFFFFFFFFFFFFFFFVLLLLLDAKKKLIEHL.FTFSF
44 44 A D > - 0 0 39 49 59 DDDDDDDDDDDDDDDDDDDDDDDDNNFNNNNNGDIIINNNNRSDEDEE
45 45 A D H > S+ 0 0 118 48 63 DDDDDDDDDDDDDDDDDDDDDDDDEDNEEEEEKLDDD.KKRNRYEYEY
46 46 A E H > S+ 0 0 141 48 55 EEEEEEEEEEEEEEEEEEEEEEEGEEAKTSATPESSS.EKEEEDHDSD
47 47 A K H > S+ 0 0 70 48 80 KKKKKKKKKKKKKKKKIIKKKKKVVIQVVVVVIKIII.GTEMQRKRRR
48 48 A I H X S+ 0 0 41 48 47 IIIIIIIIIIIIIIIIIIIIIIIIIIFIIIIILSIII.ILLMTPVPSP
49 49 A A H X S+ 0 0 53 49 70 AAAAAAAAAAAAAAAAAAAAAAALSAHDSDDSnAAAAESGEQDrNrNr
50 50 A E H X S+ 0 0 107 42 36 EEEEEEEEEEEEEEEQEEEEEEQTEDGEE..Es.DDDS.ER.Ee.e.e
51 51 A L H X S+ 0 0 8 41 51 LLLLLLLLLLLLLLLLLLLLLLLLLLMLL...V.IIIV.LR.FE.E.E
52 52 A L H X S+ 0 0 53 44 66 LLLLLLLLLLLLLLLLLLLLLLLLLLLEE...I.QQQIKRM.KLKLKL
53 53 A T H < S+ 0 0 109 44 74 TTTTTTTTTTTTTTVVTTAAAAADVQAGS...D.DDDDAKH.AAAAKA
54 54 A K H < S+ 0 0 82 46 67 KKKKKKKKKKKKKKKARRAAAAAKRKKLLEE.E.RRREDSE.KKDKEK
55 55 A L H < S- 0 0 64 47 44 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL.AAALLLL.HRLRLR
56 56 A G < - 0 0 39 48 49 GGGGGGGGGGGGGGGGGGGGGGGNNRGGGEEEEGGGGEeDG.DVtVgA
57 57 A R S S+ 0 0 225 40 48 RRRRRRRRRRRRRRRRRRRRRRRRRRR.TASSG....Gs....RrRrR
58 58 A D S S- 0 0 141 41 92 DDDDDDDDDDDDDDEEDDEEEEEDPTT.RLLLL....LAL...SASRQ
59 59 A T - 0 0 106 44 85 TTTTTTTTTTTTTTSSTTSSSSSTSSG.RTVLL.VVVLGP...RKRKR
60 60 A Q - 0 0 100 48 78 QQQQQQQQQQQQQQQQQQQQQQQKRIPTLGGGGKEEEGKMQK.SESAS
61 61 A I S S- 0 0 156 48 71 IIIIIIIIIIIIIIVIIIVVVVIVVVARTTTTTPVVVTPTET.MHMLL
62 62 A G S S- 0 0 62 49 74 GGGGGGGGGGGGGGGGGGGGGGGGGGGKMRRRRCIIIRCGLGVAGAGA
63 63 A L - 0 0 37 49 77 LLLLLLLLLLLLLLLLLLLLLLLLLLLMPKRRRPAAARNFKRKFVFLF
64 64 A T - 0 0 100 49 52 TTTTTTTTTTTTTTTTTTTTTTTTTSSTQMMLMTTTTMTTTRTTVTEQ
65 65 A M S S+ 0 0 66 49 61 MMMMMMMMMMMMMMMMVVMMMMMMMLLMISTTTVMMMTVMLTTYVYIY
66 66 A P + 0 0 10 48 39 PPPPPPPPPPPPPPPPPPPPPPPPPPPP.MMMMPPPPMPPPVPPTPTP
67 67 A Q E -B 5 0A 23 48 52 QQQQQQQQQQQQQQQQQQQQQQQQQVVQ.PPPPQQQQPQQQPQRsRgR
68 68 A V E -BC 4 77A 4 37 71 VVVVVVVVVVVVVVVVIIVVVVVIIVVI.QQQQ....Q...Q..q.q.
69 69 A F E -BC 3 75A 6 48 41 FFFFFFFFFFFFFFFFFFFFFFFFFFFF.IIIIIIIIIIIVITIVIII
70 70 A A > - 0 0 10 47 93 AAAAAAAAAAAAAAAAAAAAAAAEDE..FFFFFFFFFFFFFYFFFFFF
71 71 A P T 3 S- 0 0 31 49 94 PPPPPPPPPPPPPPPPPPPPPPPGEDAHHHHHHVYYYHVKFIIVAVIV
72 72 A D T 3 S+ 0 0 148 49 14 DDDDDDDDDDDDDDDDDDDDDDDKKEDDDDDDDDDDDDDGDDDDDDGD
73 73 A G S < S- 0 0 57 49 33 GGGGGGGGGGGRGGGGGGGGGGGDGKGGGGGGGQGGGGQNGDGGGSDN
74 74 A S S S- 0 0 95 47 79 SSSSSSSSSSSSSSSSSSTTTTS.S.EKKKKKKSDDDKSEVRQNENVV
75 75 A H E -C 69 0A 60 49 62 HHHHHHHHHHHHYHHHYYSSSSHYPHHHHHHHHHYYYHHLHHRFYFLL
76 76 A I E - 0 0A 22 49 2 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIVIIIIIIIIIVIIIIIII
77 77 A G E -C 68 0A 0 49 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
78 78 A G S > S- 0 0 14 49 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
79 79 A F H > S+ 0 0 39 49 1 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYYFYFY
80 80 A D H > S+ 0 0 123 49 39 DDDDDDDDDDDDDDDDDDDDDDTTTNNDDDDDDTDDDDDDDDDMEMDM
81 81 A Q H 4 S+ 0 0 130 49 34 QQQQQQQQQQQQQQQQKKQQQQEEEEEQQQQQQEEEEQDEDDEQEQEQ
82 82 A L H >X S+ 0 0 3 49 6 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLFFFFLFFFLLLLLLL
83 83 A R H 3X S+ 0 0 107 49 23 RRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRRRERRRRERKRRKKKRK
84 84 A E H 3< S+ 0 0 160 48 52 EEEEEEEEEEEEEEEAEEAAAAEEETAEEEEEDASSSDASAAEE ENQ
85 85 A Y H <4 S+ 0 0 125 46 14 YYYYYYYYYYYYYYYYYYYYYYYYYHHYYYYYYYFFFYYY YY YYL
86 86 A F H < 0 0 26 42 57 FFFFFFFFFFFFFFFFFFFFFFFLLIIVVVVVVA VAI FL L I
87 87 A K < 0 0 232 35 28 KKKKKKKKKKKKKKKKRRKKKKKKK RRRRRRK RK
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
2 2 A 0 5 12 0 79 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 42 0 0 0.766 25 0.71
3 3 A 0 0 2 0 0 0 0 0 0 0 0 7 0 0 0 79 2 9 0 0 43 0 0 0.767 25 0.55
4 4 A 61 2 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 44 0 0 0.754 25 0.81
5 5 A 0 0 0 0 18 0 80 0 0 0 0 2 0 0 0 0 0 0 0 0 44 0 0 0.578 19 0.90
6 6 A 0 0 0 2 0 0 0 95 0 0 0 0 0 0 2 0 0 0 0 0 44 0 0 0.216 7 0.84
7 7 A 0 0 7 2 9 2 80 0 0 0 0 0 0 0 0 0 0 0 0 0 44 1 0 0.755 25 0.73
8 8 A 2 5 16 0 0 0 0 0 0 7 0 0 0 0 0 0 0 0 0 70 43 0 0 0.963 32 0.26
9 9 A 0 0 0 0 0 0 0 0 0 28 58 2 0 0 0 0 0 12 0 0 43 0 0 1.009 33 0.35
10 10 A 0 2 0 0 0 0 0 0 0 0 32 2 0 2 0 2 0 5 48 7 44 0 0 1.385 46 0.34
11 11 A 16 5 64 0 0 0 0 0 0 0 0 2 0 2 0 0 0 5 5 2 44 0 0 1.260 42 0.42
12 12 A 0 2 0 0 4 0 26 0 2 0 0 0 0 62 0 0 4 0 0 0 47 0 0 1.079 36 0.38
13 13 A 2 0 2 0 0 0 0 0 0 0 0 0 0 0 15 57 0 2 21 0 47 0 0 1.177 39 0.44
14 14 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
15 15 A 55 0 6 0 0 0 6 0 14 8 0 0 0 0 0 10 0 0 0 0 49 0 0 1.386 46 0.20
16 16 A 0 0 0 0 16 0 47 6 0 27 0 0 0 0 0 0 0 0 4 0 49 0 0 1.305 43 0.04
17 17 A 0 0 0 0 0 0 0 2 0 0 0 0 98 0 0 0 0 0 0 0 49 0 0 0.100 3 0.95
18 18 A 4 20 16 0 0 0 0 0 0 0 0 0 0 0 0 0 6 0 0 53 49 0 0 1.258 41 0.13
19 19 A 0 0 0 0 0 0 0 2 0 0 2 0 0 0 6 6 0 6 78 0 49 0 0 0.869 29 0.58
20 20 A 0 0 0 0 0 0 0 0 82 0 16 0 2 0 0 0 0 0 0 0 49 0 0 0.541 18 0.71
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 92 2 2 0 0 49 1 1 0.368 12 0.86
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 88 8 0 2 0 2 48 0 0 0.485 16 0.79
23 23 A 0 94 0 2 4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.269 8 0.97
24 24 A 0 82 0 0 0 0 0 0 6 0 0 2 10 0 0 0 0 0 0 0 49 0 0 0.649 21 0.45
25 25 A 0 0 0 0 0 0 0 0 4 0 0 43 0 0 0 2 0 8 4 39 49 0 0 1.276 42 0.42
26 26 A 51 0 0 0 0 0 0 0 24 0 4 6 0 0 4 0 0 10 0 0 49 0 0 1.353 45 0.19
27 27 A 0 2 0 0 0 0 0 0 0 0 2 0 0 4 12 78 0 2 0 0 49 0 0 0.823 27 0.63
28 28 A 0 0 0 0 0 0 0 14 0 0 0 0 0 0 8 76 0 0 0 2 49 1 4 0.774 25 0.52
29 29 A 2 8 10 0 2 0 0 0 0 0 0 2 0 10 2 10 50 2 0 0 48 0 0 1.664 55 0.14
30 30 A 0 0 2 0 0 0 0 0 0 58 0 0 0 0 2 2 0 25 2 8 48 0 0 1.191 39 0.31
31 31 A 0 0 2 0 45 0 51 0 0 0 0 0 0 0 0 0 0 0 0 2 49 0 0 0.862 28 0.84
32 32 A 4 0 6 0 0 0 0 0 0 0 0 0 0 2 2 2 0 78 2 4 49 0 0 0.947 31 0.54
33 33 A 2 0 0 0 88 0 8 0 0 0 0 0 0 0 0 2 0 0 0 0 49 0 0 0.478 15 0.86
34 34 A 16 4 65 0 0 0 6 0 0 0 0 0 0 0 0 4 0 2 2 0 49 0 0 1.165 38 0.49
35 35 A 0 0 0 0 2 0 0 0 0 16 27 0 0 0 2 0 0 0 49 4 49 0 0 1.287 42 0.25
36 36 A 45 4 47 0 0 0 0 0 0 0 0 0 0 2 2 0 0 0 0 0 49 0 0 1.004 33 0.70
37 37 A 2 10 2 49 0 0 2 0 22 2 0 2 0 0 0 0 0 0 6 2 49 0 0 1.565 52 0.22
38 38 A 0 6 4 0 0 0 0 0 0 47 2 0 0 0 0 16 0 0 0 24 49 0 0 1.376 45 0.15
39 39 A 0 0 2 0 0 0 0 8 0 4 14 4 0 0 0 2 2 59 2 2 49 5 19 1.451 48 0.38
40 40 A 2 0 0 0 0 0 0 5 2 0 5 2 0 2 7 70 0 2 0 2 44 0 0 1.227 40 0.41
41 41 A 4 2 0 0 0 0 0 57 0 28 6 0 0 2 0 0 0 0 0 0 47 0 0 1.148 38 0.34
42 42 A 64 0 13 0 0 0 0 6 0 2 0 2 0 0 2 6 0 4 0 0 47 0 0 1.281 42 0.37
43 43 A 2 15 2 0 63 0 0 0 2 0 2 2 0 2 0 6 0 2 0 2 48 0 0 1.393 46 0.32
44 44 A 0 0 6 0 2 0 0 2 0 0 2 0 0 0 2 0 0 6 22 57 49 1 0 1.315 43 0.41
45 45 A 0 2 0 0 0 0 6 0 0 0 0 0 0 0 4 6 0 17 4 60 48 0 0 1.295 43 0.37
46 46 A 0 0 0 0 0 0 0 2 4 2 10 4 0 2 0 4 0 65 0 6 48 0 0 1.330 44 0.45
47 47 A 15 0 15 2 0 0 0 2 0 0 0 2 0 0 8 50 4 2 0 0 48 0 0 1.570 52 0.20
48 48 A 2 6 75 2 2 0 0 0 0 6 4 2 0 0 0 0 0 0 0 0 48 0 0 1.017 33 0.53
49 49 A 0 2 0 0 0 0 0 2 59 0 8 0 0 2 6 0 2 4 6 8 49 7 4 1.510 50 0.29
50 50 A 0 0 0 0 0 0 0 2 0 0 5 2 0 0 2 0 5 74 0 10 42 1 0 1.005 33 0.64
51 51 A 5 73 7 2 2 0 0 0 0 0 0 0 0 0 2 0 0 7 0 0 41 0 0 1.030 34 0.49
52 52 A 0 70 5 2 0 0 0 0 0 0 0 0 0 0 2 9 7 5 0 0 44 0 0 1.101 36 0.34
53 53 A 7 0 0 0 0 0 0 2 27 0 2 39 0 2 0 5 2 0 0 14 44 0 0 1.661 55 0.26
54 54 A 0 4 0 0 0 0 0 0 13 0 2 0 0 0 13 50 0 13 0 4 46 0 0 1.499 50 0.33
55 55 A 0 85 0 0 0 0 0 0 6 0 0 0 0 2 6 0 0 0 0 0 47 0 0 0.570 19 0.56
56 56 A 4 0 0 0 0 0 0 69 2 0 0 2 0 0 2 0 0 13 4 4 48 8 3 1.157 38 0.51
57 57 A 0 0 0 0 0 0 0 5 3 0 8 3 0 0 82 0 0 0 0 0 40 0 0 0.687 22 0.52
58 58 A 0 15 0 0 0 0 0 0 5 2 5 5 0 0 5 0 2 17 0 44 41 0 0 1.715 57 0.08
59 59 A 9 7 0 0 0 0 0 5 0 2 20 43 0 0 9 5 0 0 0 0 44 0 0 1.673 55 0.14
60 60 A 0 2 2 2 0 0 0 10 2 2 6 2 0 0 2 8 52 8 0 0 48 0 0 1.727 57 0.22
61 61 A 23 4 40 4 0 0 0 0 2 4 0 17 0 2 2 0 0 2 0 0 48 0 0 1.723 57 0.28
62 62 A 2 2 6 2 0 0 0 65 6 0 0 0 4 0 10 2 0 0 0 0 49 0 0 1.301 43 0.26
63 63 A 2 59 0 2 8 0 0 0 6 4 0 0 0 0 10 6 0 0 2 0 49 0 0 1.459 48 0.22
64 64 A 2 2 0 8 0 0 0 0 0 0 4 76 0 0 2 0 4 2 0 0 49 0 0 0.995 33 0.47
65 65 A 10 6 4 59 0 0 6 0 0 0 2 12 0 0 0 0 0 0 0 0 49 1 0 1.352 45 0.38
66 66 A 2 0 0 10 0 0 0 0 0 83 0 4 0 0 0 0 0 0 0 0 48 0 0 0.601 20 0.60
67 67 A 4 0 0 0 0 0 0 2 0 13 2 0 0 0 6 0 73 0 0 0 48 11 2 0.957 31 0.48
68 68 A 65 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 22 0 0 0 37 0 0 0.882 29 0.28
69 69 A 4 0 33 0 60 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 48 2 0 0.884 29 0.58
70 70 A 0 0 0 0 40 0 2 0 51 0 0 0 0 0 0 0 0 4 0 2 47 0 0 1.008 33 0.06
71 71 A 10 0 6 0 2 0 6 2 4 49 0 0 0 14 0 2 0 2 0 2 49 0 0 1.730 57 0.06
72 72 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 4 0 2 0 90 49 0 0 0.437 14 0.86
73 73 A 0 0 0 0 0 0 0 80 0 0 2 0 0 0 2 2 4 0 4 6 49 2 0 0.852 28 0.66
74 74 A 6 0 0 0 0 0 0 0 0 0 49 9 0 0 2 15 2 6 4 6 47 0 0 1.668 55 0.21
75 75 A 0 6 0 0 4 0 16 0 0 2 8 0 0 61 2 0 0 0 0 0 49 0 0 1.261 42 0.37
76 76 A 4 0 96 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.171 5 0.97
77 77 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
78 78 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.000 0 1.00
79 79 A 0 0 0 0 92 0 8 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.283 9 0.99
80 80 A 0 0 0 6 0 0 0 0 0 0 0 8 0 0 0 0 0 2 4 80 49 0 0 0.767 25 0.60
81 81 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 63 27 0 6 49 0 0 0.943 31 0.66
82 82 A 0 86 0 0 14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 49 0 0 0.410 13 0.93
83 83 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 84 12 0 4 0 0 49 0 0 0.537 17 0.76
84 84 A 0 0 0 0 0 0 0 0 21 0 8 2 0 0 0 0 2 60 2 4 48 0 0 1.213 40 0.48
85 85 A 0 2 0 0 7 0 87 0 0 0 0 0 0 4 0 0 0 0 0 0 46 0 0 0.519 17 0.85
86 86 A 17 10 10 0 60 0 0 0 5 0 0 0 0 0 0 0 0 0 0 0 42 0 0 1.200 40 0.43
87 87 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 74 0 0 0 0 35 0 0 0.570 19 0.72
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
24 40 40 4 nKDENg
25 39 41 5 gNEADGt
26 40 40 4 sKNEEg
27 40 40 3 sVNEh
28 40 40 5 sKGEDGk
29 40 40 5 eKDADGk
30 40 40 5 sKGEDGk
31 40 40 4 sVEDGk
32 40 40 5 eKDADGk
33 50 50 1 nEs
34 9 19 4 kDLSEr
34 16 30 1 dDf
34 27 42 1 eGv
35 29 38 5 gVDENGr
36 29 38 5 gVDENGr
37 29 38 5 gVDENGr
38 40 40 5 sKGEDGk
39 16 26 1 kEe
39 39 50 1 eKs
40 28 28 1 rGi
40 39 40 4 eGTSEe
41 40 40 4 eKVTDa
42 27 27 1 gVt
44 39 41 3 pANNs
44 49 54 1 rIe
45 54 54 1 tRr
45 65 66 2 sMPq
46 39 41 3 pANNs
46 49 54 1 rIe
47 54 54 1 gEr
47 65 66 4 gFTMPq
48 37 41 3 eAKNd
48 47 54 1 rIe
//