Complet list of 1d9n hssp file
Complete list of 1d9n.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1D9N
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-10
HEADER GENE REGULATION 28-OCT-99 1D9N
COMPND MOL_ID: 1; MOLECULE: METHYL-CPG-BINDING PROTEIN MBD1; CHAIN: A; FRAGME
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR I.OHKI,N.SHIMOTAKE,N.FUJITA,M.NAKAO,M.SHIRAKAWA
DBREF 1D9N A 1 75 UNP Q9UIS9 MBD1_HUMAN 1 75
SEQLENGTH 75
NCHAIN 1 chain(s) in 1D9N data set
NALIGN 38
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A2T6V0_MACNE 1.00 1.00 1 75 1 75 75 0 0 142 A2T6V0 MBD1 (Fragment) OS=Macaca nemestrina GN=MBD1 PE=4 SV=1
2 : U6DQT8_NEOVI 1.00 1.00 9 75 1 67 67 0 0 201 U6DQT8 Uncharacterized protein (Fragment) OS=Neovison vison GN=B4DI41 PE=2 SV=1
3 : G3HQI6_CRIGR 0.89 0.93 1 75 13 87 75 0 0 330 G3HQI6 Methyl-CpG-binding domain protein 1 (Fragment) OS=Cricetulus griseus GN=I79_013088 PE=4 SV=1
4 : G9K9S6_MUSPF 0.87 0.90 1 75 33 111 79 1 4 341 G9K9S6 Methyl-CpG binding domain protein 1 (Fragment) OS=Mustela putorius furo PE=2 SV=1
5 : F6ZIY9_MONDO 0.85 0.90 1 71 1 71 71 0 0 255 F6ZIY9 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
6 : Q3TRE4_MOUSE 0.84 0.89 1 75 1 75 75 0 0 298 Q3TRE4 Putative uncharacterized protein OS=Mus musculus GN=Mbd1 PE=2 SV=1
7 : F6ZF04_MONDO 0.79 0.92 1 75 1 75 75 0 0 284 F6ZF04 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
8 : F6TCM8_MONDO 0.77 0.91 1 75 1 75 75 0 0 248 F6TCM8 Uncharacterized protein OS=Monodelphis domestica PE=4 SV=1
9 : M3ZP04_XIPMA 0.58 0.74 1 69 1 69 69 0 0 265 M3ZP04 Uncharacterized protein OS=Xiphophorus maculatus PE=4 SV=1
10 : H2SUB2_TAKRU 0.57 0.72 1 69 1 69 69 0 0 257 H2SUB2 Uncharacterized protein OS=Takifugu rubripes GN=LOC101080044 PE=4 SV=1
11 : H3CDI5_TETNG 0.57 0.74 1 69 1 69 69 0 0 265 H3CDI5 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
12 : Q5EFL0_CHICK2KY8 0.57 0.79 3 69 4 70 67 0 0 257 Q5EFL0 Methyl-CpG-binding domain protein 2 OS=Gallus gallus GN=MBD2 PE=1 SV=1
13 : E7F3L2_DANRE 0.55 0.72 1 69 1 69 69 0 0 137 E7F3L2 Uncharacterized protein OS=Danio rerio GN=mbd2 PE=4 SV=1
14 : I3K458_ORENI 0.55 0.75 1 69 2 70 69 0 0 266 I3K458 Uncharacterized protein OS=Oreochromis niloticus GN=LOC100708236 PE=4 SV=1
15 : Q7ZTV3_DANRE 0.55 0.72 1 69 1 69 69 0 0 256 Q7ZTV3 Mbd2 protein OS=Danio rerio GN=mbd2 PE=2 SV=1
16 : R7TNW3_CAPTE 0.55 0.69 6 67 9 70 62 0 0 119 R7TNW3 Uncharacterized protein OS=Capitella teleta GN=CAPTEDRAFT_180602 PE=4 SV=1
17 : K1RFC5_CRAGI 0.54 0.70 1 69 1 69 69 0 0 248 K1RFC5 Methyl-CpG-binding domain protein 2 OS=Crassostrea gigas GN=CGI_10011651 PE=4 SV=1
18 : U6DUB5_NEOVI 0.54 0.78 2 69 23 90 68 0 0 157 U6DUB5 Methyl-CpG-binding domain protein 2 (Fragment) OS=Neovison vison GN=MBD2 PE=2 SV=1
19 : M9VT90_STIJA 0.53 0.75 8 67 12 71 60 0 0 159 M9VT90 Methyl-CpG-binding domain protein 2/3 OS=Stichopus japonicus GN=3 PE=2 SV=1
20 : H2LJC5_ORYLA 0.52 0.70 1 69 1 69 69 0 0 229 H2LJC5 Uncharacterized protein OS=Oryzias latipes GN=LOC101172482 PE=4 SV=1
21 : H9IVZ4_BOMMO 0.52 0.71 1 69 5 73 69 0 0 249 H9IVZ4 Uncharacterized protein OS=Bombyx mori PE=4 SV=1
22 : Q4SDD1_TETNG 0.52 0.68 1 69 1 69 69 0 0 261 Q4SDD1 Chromosome 1 SCAF14640, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00020101001 PE=4 SV=1
23 : G6DHI0_DANPL 0.51 0.67 1 69 5 73 69 0 0 251 G6DHI0 Putative methyl-CpG binding transcription regulator OS=Danaus plexippus GN=KGM_10271 PE=4 SV=1
24 : H2UBA2_TAKRU 0.51 0.69 2 69 2 69 68 0 0 258 H2UBA2 Uncharacterized protein (Fragment) OS=Takifugu rubripes PE=4 SV=1
25 : G0YL10_SCHGR 0.49 0.70 1 69 21 89 69 0 0 182 G0YL10 Methyl-binding protein (Fragment) OS=Schistocerca gregaria PE=2 SV=1
26 : G1QMA4_NOMLE 0.48 0.70 1 69 80 148 69 0 0 169 G1QMA4 Uncharacterized protein (Fragment) OS=Nomascus leucogenys PE=4 SV=2
27 : H2SUB3_TAKRU 0.43 0.56 1 69 1 90 90 1 21 275 H2SUB3 Uncharacterized protein OS=Takifugu rubripes GN=LOC101080044 PE=4 SV=1
28 : M7BTP0_CHEMY 0.42 0.55 9 64 5 64 60 1 4 86 M7BTP0 Methyl-CpG-binding protein 2 OS=Chelonia mydas GN=UY3_01553 PE=4 SV=1
29 : H2LJC8_ORYLA 0.41 0.60 1 69 1 78 78 2 9 208 H2LJC8 Uncharacterized protein OS=Oryzias latipes GN=LOC101172482 PE=4 SV=1
30 : H2LJC4_ORYLA 0.40 0.53 1 69 1 91 91 1 22 292 H2LJC4 Uncharacterized protein OS=Oryzias latipes GN=LOC101172482 PE=4 SV=1
31 : Q8AYP1_XENLA 0.39 0.57 1 69 1 88 88 1 19 302 Q8AYP1 MBD3 protein OS=Xenopus laevis GN=MBD3 PE=2 SV=1
32 : S4RTP1_PETMA 0.39 0.52 10 67 18 79 62 1 4 131 S4RTP1 Uncharacterized protein (Fragment) OS=Petromyzon marinus PE=4 SV=1
33 : D8RKM3_SELML 0.38 0.62 14 75 77 135 63 3 5 141 D8RKM3 Putative uncharacterized protein (Fragment) OS=Selaginella moellendorffii GN=SELMODRAFT_38000 PE=4 SV=1
34 : F6ZDA3_XENTR 0.38 0.56 1 69 1 89 89 1 20 301 F6ZDA3 Uncharacterized protein OS=Xenopus tropicalis GN=mbd3 PE=4 SV=1
35 : Q6DK69_XENTR 0.38 0.56 1 69 1 89 89 1 20 301 Q6DK69 Methyl-CpG binding domain protein 3 OS=Xenopus tropicalis GN=mbd3 PE=2 SV=1
36 : Q9PUM8_XENLA 0.38 0.56 1 69 1 89 89 1 20 303 Q9PUM8 Methyl-CpG binding protein MBD3 long form OS=Xenopus laevis GN=mbd3 PE=2 SV=1
37 : T1III7_STRMM 0.37 0.55 13 67 2 61 60 2 5 69 T1III7 Uncharacterized protein OS=Strigamia maritima PE=4 SV=1
38 : H0XK18_OTOGA 0.35 0.51 3 69 3 93 91 2 24 307 H0XK18 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=MBD3 PE=4 SV=1
## ALIGNMENTS 1 - 38
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 247 28 10 M MMMMMMMMM MMM M MIMI LMM MMM MMM
2 2 A A - 0 0 80 30 51 A AAAAAAEEE EEE ES EEEEDEEE EEE EEE
3 3 A E S S- 0 0 89 32 67 E GEDEDDRRRQKRK KG KRKKEKRR KKK RRK E
4 4 A D + 0 0 59 32 65 D DDTSDHKKKGKKK RK KKKKGRKK KKK KKK T
5 5 A W + 0 0 78 32 24 W WWWWWWKKKRRRR RR RRRKWKRK RRR RRR R
6 6 A L E -A 17 0A 102 33 86 L QLLQLLTSTTTTTLLM WSWSVYWS WWW WWW W
7 7 A D E -A 16 0A 124 33 14 D DEDDDDDDDDDDDDDD DDDDEEED DDE EEE E
8 8 A C > - 0 0 2 34 22 C CCCCCCCCCCCCCICCCCCCCWCCC CCC CCC C
9 9 A P T 4 S+ 0 0 93 36 46 PPPPPPPPPPPPPPPPVPLSSTDPSPPPSSS SSS P
10 10 A A T 4 S+ 0 0 26 37 37 AAAAVATTAAAAAAAGGAGAAAAVAAATAAAS AAA A
11 11 A L T 4 S- 0 0 31 37 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLL L
12 12 A G < - 0 0 15 37 44 GGGGGGGGPPPPPPPPPPPPPPPGPPPPPPPP PPP P
13 13 A P S S+ 0 0 121 38 58 PPPPPPPPPPPPPPPPPPTKKKKEKQPEKKQA QQQPQ
14 14 A G S S+ 0 0 44 39 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
15 15 A W - 0 0 5 39 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
16 16 A K E -AB 7 36A 102 39 38 KKKKKKKKKKKKKKKRKKKKQKQKQEKTKKKLKKKKEE
17 17 A R E +AB 6 35A 20 39 34 RRRRRRRRKKKKKKKRRKRMRMRRRRKRMMKRRKKKRR
18 18 A R E - B 0 34A 47 39 57 RRRRRRRREEEEEEEEEEEEEEEKEEEKEEEKDEEEEE
19 19 A E E - B 0 33A 50 39 33 EEEEEEEEEEEEEEEEEEEEEEEEEEELEEELFEEEAE
20 20 A V + 0 0 26 39 39 VVAVTSAVVVVVVVVNVVVVVVVVVVVKVVVKVVVVVV
21 21 A F S S+ 0 0 143 39 82 FFFFFFSPIIIIIIIVVIITVTVVIPIQTTTQITTTQP
22 22 A R S S+ 0 0 137 39 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
23 23 A K S S+ 0 0 167 39 26 KKKKKKKKKKKKKKKKKKKKKKKRKRKKKKRKSRRRQR
24 24 A S S S+ 0 0 104 39 21 SSSSSSSSSSSSSSSSSSSSTSTSSSSSSSSSESSSTS
25 25 A G S S- 0 0 51 39 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
26 26 A A > - 0 0 81 38 76 AAAAAAATLLLLLLLLLLLLLLLCLLLRLLLR.LLLIL
27 27 A T T 3 S+ 0 0 161 38 36 TTSTTSTTSSSSSSSSSSSSSSSSSSSSSSSS.SSSTS
28 28 A C T 3 S+ 0 0 118 39 56 CCCCCFCCAAAAAAAAAAAAAAAMAAAAAAAACAAAIA
29 29 A G < - 0 0 34 39 4 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGG
30 30 A R - 0 0 186 39 36 RRRRRRRRKKKKKKKKKKKKKKKQKHKKkKKKrKKKRh
31 31 A S - 0 0 11 39 69 SSSSSSTTSSSSSSSTTSTSVSVKVRSYdSSYgSSSWd
32 32 A D - 0 0 51 39 11 DDDDDDDDDDDDDDDDDDDDDDDDDDDDVDDDDDDDDV
33 33 A T E +B 19 0A 7 39 46 TTITTITTVVVVVVVVVVIVVVVVVVVVYVVVIVVVIF
34 34 A Y E -B 18 0A 71 39 0 YYYYYYYYYYYYYYYYYYYYYYYYYFYYYYYYYYYYYY
35 35 A Y E -BC 17 43A 0 39 12 YYYYYYYYYYYYYYYYYYYYYYYYYYYLFYYIYYYYFY
36 36 A Q E -BC 16 42A 70 39 90 QQLQQQQQYYYFYYYIIFFFYFYMYYYIRFYFIYYYNS
37 37 A S - 0 0 4 39 22 SSSSSSSSSSSSSSSSSSSSSSSGSSsNgssSSsssPk
38 38 A P S S+ 0 0 105 39 0 PPPPPPPPPPPPPPPPPPPPPPPPPPpPpppPPpppPp
39 39 A T S S- 0 0 100 39 72 TTTTTTTTTSSSKSKDDSCSTSTHNSSQSSSECSSSES
40 40 A G S S+ 0 0 34 39 5 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEG
41 41 A D - 0 0 73 39 50 DDDDDEEDKKKKKKKTKKRKKKKDKKKKKKKKKKKKqK
42 42 A R E -C 36 0A 192 39 43 RRKRLKRRKKKKKKKRKKKKKKKRKKKAKKKQKKKKaK
43 43 A I E +C 35 0A 9 39 35 IIIIIIIIFFFFFFFVIFFFFFCFFFFFFFFFLFFFLF
44 44 A R + 0 0 156 39 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
45 45 A S S > S- 0 0 68 39 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
46 46 A K T >> S+ 0 0 46 39 20 KKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKHMKKKRK
47 47 A V H 3> S+ 0 0 46 39 59 VVVVVVVVPPPPPPPPPPPPPPSVPPPVPPPAVPPPPP
48 48 A E H <> S+ 0 0 94 39 33 EEEEEEEEQQQQQQQQQQQQEQEEQQQEQQQEEQQQEQ
49 49 A L H <> S+ 0 0 0 39 7 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVLLLVL
50 50 A T H X S+ 0 0 15 39 71 TTTTTTTTASSASSSCAAAAVAVVAASIAAARAAAAKA
51 51 A R H < S+ 0 0 170 39 39 RRRVRRRRRRRRRRRRRRRRRRRSRRRARRRVKRRRER
52 52 A Y H < S+ 0 0 100 39 28 YYYEFYFFYYYYYYYMQYFYYYYVYYYYYYYYFYYYYY
53 53 A L H < S- 0 0 52 39 6 LLLLLLLMLLLLLLLVLLLLLLLLLLLFLLLFLLLLLL
54 54 A G >< - 0 0 20 39 23 GGGTGGGGGGGGGGGGGGGGGGGNGGGEGGGGEGGGEG
55 55 A P T 3 S+ 0 0 146 39 69 PPPrPPPPNNNNNNNDENDNDNDGDGNkNNNkDNNNnG
56 56 A A T 3 S+ 0 0 88 38 69 AAAaDADDAAAATTTAQTSQSQSIASAsQQSi.SSSaS
57 57 A C < - 0 0 28 38 78 CCCCCCCCVVVVVVVVFVFMVMVLLMVLMMML.MMMYM
58 58 A D + 0 0 84 39 22 DDDDDDDDDDDDDDDDDDDDDDNDDDDDDDDKHDDDRD
59 59 A L > + 0 0 0 39 33 LLLLLLLLLLLLLLLLLLLLLLLLLLLPLLLPPLLLPL
60 60 A T T 3 S+ 0 0 97 39 58 TTTSSTSSAGASGAGNSSSSSSSTASGNSSSEESSSDS
61 61 A L T 3 S+ 0 0 98 39 90 LLLLCLCSCCCCCCCSASASCSYTTTCDSSTDYTTTLT
62 62 A F < - 0 0 0 39 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFYFFFFF
63 63 A D > - 0 0 75 39 0 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
64 64 A F T 4 S+ 0 0 33 39 3 FFFFFFFFFFFFFFFFFFFFFFYYFFFFFFFFLFFFWF
65 65 A K T 4 S+ 0 0 97 38 44 KKRKKRKKRRRRRRRRRRRRQRQKRRR RRRTSRRRQR
66 66 A Q T 4 S- 0 0 142 38 75 QQQQQQRSTTTTTTTTSTSTQTQTSTT TTTVVTTTPT
67 67 A G < + 0 0 14 38 9 GGGGGGGGGGGGGGGGGGGGGGGGGGG GGGGDGGGAG
68 68 A I - 0 0 86 34 78 IIIIVTVVKKKKKKK RK KQKQQKKK KKK QKKK K
69 69 A L - 0 0 44 34 23 LLLLLLLLMMMMMMM IM MIMLFIMM MMM FMMM M
70 70 A C - 0 0 83 10 71 CCCCQCQR C
71 71 A Y - 0 0 172 10 16 YYYYYHYY Y
72 72 A P S S- 0 0 113 9 79 PPPP PCL T
73 73 A A - 0 0 70 9 78 AAAA IPP I
74 74 A P 0 0 110 9 20 PPPP PPT P
75 75 A K 0 0 262 9 44 KKKK KRK Q
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 4 7 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0.409 13 0.90
2 2 A 0 0 0 0 0 0 0 0 27 0 3 0 0 0 0 0 0 67 0 3 30 0 0 0.850 28 0.49
3 3 A 0 0 0 0 0 0 0 6 0 0 0 0 0 0 28 34 3 19 0 9 32 0 0 1.541 51 0.32
4 4 A 0 0 0 0 0 0 0 6 0 0 3 6 0 3 6 59 0 0 0 16 32 0 0 1.336 44 0.35
5 5 A 0 0 0 0 0 28 0 0 0 0 0 0 0 0 53 19 0 0 0 0 32 0 0 1.007 33 0.76
6 6 A 3 24 0 3 0 30 3 0 0 0 12 18 0 0 0 0 6 0 0 0 33 0 0 1.759 58 0.14
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 27 0 73 33 0 0 0.586 19 0.85
8 8 A 0 0 3 0 0 3 0 0 0 0 0 0 94 0 0 0 0 0 0 0 34 0 0 0.264 8 0.77
9 9 A 3 3 0 0 0 0 0 0 0 64 25 3 0 0 0 0 0 0 0 3 36 0 0 1.031 34 0.54
10 10 A 5 0 0 0 0 0 0 8 76 0 3 8 0 0 0 0 0 0 0 0 37 0 0 0.874 29 0.62
11 11 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 37 0 0 0.000 0 1.00
12 12 A 0 0 0 0 0 0 0 27 0 73 0 0 0 0 0 0 0 0 0 0 37 0 0 0.584 19 0.55
13 13 A 0 0 0 0 0 0 0 0 3 55 0 3 0 0 0 18 16 5 0 0 38 0 0 1.277 42 0.41
14 14 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
15 15 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
16 16 A 0 3 0 0 0 0 0 0 0 0 0 3 0 0 3 77 8 8 0 0 39 0 0 0.878 29 0.62
17 17 A 0 0 0 10 0 0 0 0 0 0 0 0 0 0 56 33 0 0 0 0 39 0 0 0.923 30 0.65
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 23 8 0 67 0 3 39 0 0 0.900 30 0.42
19 19 A 0 5 0 0 3 0 0 0 3 0 0 0 0 0 0 0 0 90 0 0 39 0 0 0.437 14 0.67
20 20 A 82 0 0 0 0 0 0 0 5 0 3 3 0 0 0 5 0 0 3 0 39 0 0 0.749 24 0.61
21 21 A 13 0 31 0 18 0 0 0 0 8 3 21 0 0 0 0 8 0 0 0 39 0 0 1.748 58 0.17
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 39 0 0 0.000 0 1.00
23 23 A 0 0 0 0 0 0 0 0 0 0 3 0 0 0 18 77 3 0 0 0 39 0 0 0.698 23 0.74
24 24 A 0 0 0 0 0 0 0 0 0 0 90 8 0 0 0 0 0 3 0 0 39 0 0 0.388 12 0.79
25 25 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 39 1 0 0.000 0 1.00
26 26 A 0 66 3 0 0 0 0 0 21 0 0 3 3 0 5 0 0 0 0 0 38 0 0 1.046 34 0.23
27 27 A 0 0 0 0 0 0 0 0 0 0 79 21 0 0 0 0 0 0 0 0 38 0 0 0.515 17 0.64
28 28 A 0 0 3 3 3 0 0 0 69 0 0 0 23 0 0 0 0 0 0 0 39 0 0 0.875 29 0.43
29 29 A 0 0 0 0 0 0 0 97 0 0 3 0 0 0 0 0 0 0 0 0 39 0 0 0.119 3 0.95
30 30 A 0 0 0 0 0 0 0 0 0 0 0 0 0 5 28 64 3 0 0 0 39 0 3 0.888 29 0.64
31 31 A 8 0 0 0 0 3 5 3 0 0 59 13 0 0 3 3 0 0 0 5 39 0 0 1.452 48 0.30
32 32 A 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 95 39 0 0 0.202 6 0.88
33 33 A 64 0 13 0 3 0 3 0 0 0 0 18 0 0 0 0 0 0 0 0 39 0 0 1.045 34 0.54
34 34 A 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.119 3 1.00
35 35 A 0 3 3 0 5 0 90 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.437 14 0.88
36 36 A 0 3 10 3 18 0 38 0 0 0 3 0 0 0 3 0 21 0 3 0 39 0 0 1.704 56 0.09
37 37 A 0 0 0 0 0 0 0 5 0 3 87 0 0 0 0 3 0 0 3 0 39 0 8 0.554 18 0.77
38 38 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
39 39 A 0 0 0 0 0 0 0 0 0 0 41 31 5 3 0 5 3 5 3 5 39 0 0 1.619 54 0.28
40 40 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 0 0 0 3 0 0 39 0 0 0.119 3 0.94
41 41 A 0 0 0 0 0 0 0 0 0 0 0 3 0 0 3 67 3 5 0 21 39 0 1 1.029 34 0.50
42 42 A 0 3 0 0 0 0 0 0 5 0 0 0 0 0 21 69 3 0 0 0 39 0 0 0.920 30 0.57
43 43 A 3 5 26 0 64 0 0 0 0 0 0 0 3 0 0 0 0 0 0 0 39 0 0 0.974 32 0.65
44 44 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 39 0 0 0.000 0 1.00
45 45 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 39 0 0 0.000 0 1.00
46 46 A 0 0 0 3 0 0 0 0 0 0 0 0 0 3 5 90 0 0 0 0 39 0 0 0.437 14 0.80
47 47 A 31 0 0 0 0 0 0 0 3 64 3 0 0 0 0 0 0 0 0 0 39 0 0 0.836 27 0.41
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 59 41 0 0 39 0 0 0.677 22 0.67
49 49 A 5 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.202 6 0.92
50 50 A 8 0 3 0 0 0 0 0 44 0 15 23 3 0 3 3 0 0 0 0 39 0 0 1.561 52 0.29
51 51 A 5 0 0 0 0 0 0 0 3 0 3 0 0 0 85 3 0 3 0 0 39 0 0 0.669 22 0.60
52 52 A 3 0 0 3 13 0 77 0 0 0 0 0 0 0 0 0 3 3 0 0 39 0 0 0.841 28 0.72
53 53 A 3 90 0 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.437 14 0.94
54 54 A 0 0 0 0 0 0 0 87 0 0 0 3 0 0 0 0 0 8 3 0 39 0 0 0.505 16 0.76
55 55 A 0 0 0 0 0 0 0 8 0 21 0 0 0 0 3 5 0 3 46 15 39 1 4 1.507 50 0.31
56 56 A 0 0 5 0 0 0 0 0 37 0 26 11 0 0 0 0 13 0 0 8 38 0 0 1.578 52 0.31
57 57 A 32 11 0 26 5 0 3 0 0 0 0 0 24 0 0 0 0 0 0 0 38 0 0 1.544 51 0.22
58 58 A 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 3 0 0 3 90 39 0 0 0.473 15 0.78
59 59 A 0 90 0 0 0 0 0 0 0 10 0 0 0 0 0 0 0 0 0 0 39 0 0 0.331 11 0.66
60 60 A 0 0 0 0 0 0 0 10 10 0 51 15 0 0 0 0 0 5 5 3 39 0 0 1.496 49 0.42
61 61 A 0 18 0 0 0 0 5 0 5 0 18 21 28 0 0 0 0 0 0 5 39 0 0 1.756 58 0.10
62 62 A 0 0 0 0 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.119 3 0.99
63 63 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 39 0 0 0.000 0 1.00
64 64 A 0 3 0 0 90 3 5 0 0 0 0 0 0 0 0 0 0 0 0 0 39 0 0 0.437 14 0.96
65 65 A 0 0 0 0 0 0 0 0 0 0 3 3 0 0 66 21 8 0 0 0 38 0 0 0.995 33 0.55
66 66 A 5 0 0 0 0 0 0 0 0 3 11 55 0 0 3 0 24 0 0 0 38 0 0 1.252 41 0.25
67 67 A 0 0 0 0 0 0 0 95 3 0 0 0 0 0 0 0 0 0 0 3 38 0 0 0.243 8 0.91
68 68 A 9 0 15 0 0 0 0 0 0 0 0 3 0 0 3 59 12 0 0 0 34 0 0 1.267 42 0.21
69 69 A 0 29 9 56 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 34 0 0 1.066 35 0.76
70 70 A 0 0 0 0 0 0 0 0 0 0 0 0 70 0 10 0 20 0 0 0 10 0 0 0.802 26 0.28
71 71 A 0 0 0 0 0 0 90 0 0 0 0 0 0 10 0 0 0 0 0 0 10 0 0 0.325 10 0.84
72 72 A 0 11 0 0 0 0 0 0 0 67 0 11 11 0 0 0 0 0 0 0 9 0 0 1.003 33 0.21
73 73 A 0 0 22 0 0 0 0 0 56 22 0 0 0 0 0 0 0 0 0 0 9 0 0 0.995 33 0.21
74 74 A 0 0 0 0 0 0 0 0 0 89 0 11 0 0 0 0 0 0 0 0 9 0 0 0.349 11 0.80
75 75 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 78 11 0 0 0 9 0 0 0.684 22 0.56
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 56 88 4 rYLGPa
27 38 38 21 sLHFCRSLPLLDRVECLNKINSp
28 48 52 4 kVGDTs
29 31 31 1 kSd
29 38 39 8 gEEQDEEQSp
30 38 38 22 sSQPTPTQTAVGDRLGWLSRLVSp
31 38 38 19 sSPSRYNRSLRDRVGCLNINp
32 47 64 4 kVGEGi
33 16 92 1 rFg
34 38 38 20 sSSPSRYNRSLRDRVGYLKLHp
35 38 38 20 sSSPSRYNRSLRDRVGYLNTNp
36 38 38 20 sSSPSRYNRSLRDRVGCLNINp
37 30 31 1 qYa
37 44 46 4 nELGQa
38 29 31 1 hRd
38 36 39 23 kVSRTSFCVNTDLQNLLGYIELNIp
//