Complet list of 1d6g hssp file
Complete list of 1d6g.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1D6G
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-27
HEADER HORMONE/GROWTH FACTOR 13-OCT-99 1D6G
COMPND MOL_ID: 1; MOLECULE: CHOLECYSTOKININ TYPE A RECEPTOR; CHAIN: A; FRAGME
SOURCE MOL_ID: 1; SYNTHETIC: YES; OTHER_DETAILS: THE PROTEIN WAS CHEMICALLY S
AUTHOR M.PELLEGRINI,D.F.MIERKE
DBREF 1D6G A 1 47 UNP P32238 CCKAR_HUMAN 1 47
DBREF 1D6G B 1 9 PDB 1D6G 1D6G 1 9
SEQLENGTH 47
NCHAIN 1 chain(s) in 1D6G data set
NALIGN 47
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CCKAR_HUMAN 0.96 0.96 1 47 1 47 47 0 0 428 P32238 Cholecystokinin receptor type A OS=Homo sapiens GN=CCKAR PE=1 SV=1
2 : F6YY18_MACMU 0.96 0.96 1 47 1 47 47 0 0 428 F6YY18 Uncharacterized protein OS=Macaca mulatta GN=CCKAR PE=3 SV=1
3 : G1S4V8_NOMLE 0.96 0.96 1 47 1 47 47 0 0 428 G1S4V8 Uncharacterized protein OS=Nomascus leucogenys GN=CCKAR PE=3 SV=1
4 : G3RGQ3_GORGO 0.96 0.96 1 47 1 47 47 0 0 428 G3RGQ3 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101140247 PE=3 SV=1
5 : G7MSP8_MACMU 0.96 0.96 1 47 1 47 47 0 0 428 G7MSP8 Cholecystokinin receptor type A OS=Macaca mulatta GN=EGK_15629 PE=3 SV=1
6 : G7P5D4_MACFA 0.96 0.96 1 47 1 47 47 0 0 428 G7P5D4 Cholecystokinin receptor type A OS=Macaca fascicularis GN=EGM_14275 PE=3 SV=1
7 : H2PD27_PONAB 0.96 0.96 1 47 1 47 47 0 0 428 H2PD27 Uncharacterized protein OS=Pongo abelii GN=CCKAR PE=3 SV=1
8 : H2QPB3_PANTR 0.96 0.96 1 47 1 47 47 0 0 428 H2QPB3 Uncharacterized protein OS=Pan troglodytes GN=CCKAR PE=3 SV=1
9 : F7H5F1_CALJA 0.91 0.96 1 47 1 47 47 0 0 429 F7H5F1 Uncharacterized protein OS=Callithrix jacchus GN=CCKAR PE=3 SV=1
10 : F7HAI0_CALJA 0.91 0.96 1 47 1 47 47 0 0 413 F7HAI0 Uncharacterized protein OS=Callithrix jacchus GN=CCKAR PE=3 SV=1
11 : M3YZ49_MUSPF 0.91 0.96 1 47 1 47 47 0 0 428 M3YZ49 Uncharacterized protein OS=Mustela putorius furo GN=CCKAR PE=3 SV=1
12 : S9WIT4_9CETA 0.91 0.96 1 47 1 47 47 0 0 255 S9WIT4 Cholecystokinin receptor type A OS=Camelus ferus GN=CB1_001085006 PE=3 SV=1
13 : CCKAR_MOUSE 0.89 0.96 1 47 1 47 47 0 0 436 O08786 Cholecystokinin receptor type A OS=Mus musculus GN=Cckar PE=2 SV=1
14 : CCKAR_RAT 0.89 0.96 1 47 16 62 47 0 0 444 P30551 Cholecystokinin receptor type A OS=Rattus norvegicus GN=Cckar PE=1 SV=1
15 : F1LQR7_RAT 0.89 0.96 1 47 16 62 47 0 0 444 F1LQR7 Cholecystokinin receptor type A OS=Rattus norvegicus GN=Cckar PE=3 SV=2
16 : G3SLF4_LOXAF 0.89 0.96 1 47 1 47 47 0 0 434 G3SLF4 Uncharacterized protein OS=Loxodonta africana GN=CCKAR PE=3 SV=1
17 : G3UE63_LOXAF 0.89 0.96 1 47 15 61 47 0 0 420 G3UE63 Uncharacterized protein (Fragment) OS=Loxodonta africana GN=CCKAR PE=3 SV=1
18 : H0XUS5_OTOGA 0.89 0.96 1 47 17 63 47 0 0 445 H0XUS5 Uncharacterized protein (Fragment) OS=Otolemur garnettii GN=CCKAR PE=3 SV=1
19 : L5K7I8_PTEAL 0.89 0.96 1 47 1 47 47 0 0 428 L5K7I8 Cholecystokinin receptor type A OS=Pteropus alecto GN=PAL_GLEAN10022646 PE=3 SV=1
20 : G5B014_HETGA 0.87 0.94 1 47 1 47 47 0 0 430 G5B014 Cholecystokinin receptor type A OS=Heterocephalus glaber GN=GW7_06091 PE=3 SV=1
21 : A6QLH2_BOVIN 0.85 0.94 1 47 1 47 47 0 0 427 A6QLH2 CCKAR protein OS=Bos taurus GN=CCKAR PE=2 SV=1
22 : A8PWS9_BOVIN 0.85 0.94 1 47 1 47 47 0 0 296 A8PWS9 CCKAR protein OS=Bos taurus GN=CCKAR PE=2 SV=1
23 : CCKAR_CAVPO 0.85 0.96 1 47 1 47 47 0 0 430 Q63931 Cholecystokinin receptor type A OS=Cavia porcellus GN=CCKAR PE=2 SV=1
24 : D2HPF9_AILME 0.85 0.94 1 47 1 47 47 0 0 427 D2HPF9 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_013660 PE=3 SV=1
25 : G1M847_AILME 0.85 0.94 1 47 1 47 47 0 0 428 G1M847 Uncharacterized protein OS=Ailuropoda melanoleuca GN=CCKAR PE=3 SV=1
26 : H0V976_CAVPO 0.85 0.96 1 47 13 59 47 0 0 442 H0V976 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=Cckar PE=3 SV=1
27 : L8IJY1_9CETA 0.85 0.94 1 47 1 47 47 0 0 428 L8IJY1 Cholecystokinin receptor type A OS=Bos mutus GN=M91_04088 PE=3 SV=1
28 : L9KFJ4_TUPCH 0.85 0.87 1 47 1 47 47 0 0 585 L9KFJ4 Cholecystokinin receptor type A OS=Tupaia chinensis GN=TREES_T100003179 PE=3 SV=1
29 : M3W880_FELCA 0.85 0.94 1 47 5 51 47 0 0 433 M3W880 Uncharacterized protein (Fragment) OS=Felis catus GN=CCKAR PE=3 SV=1
30 : W5PES8_SHEEP 0.85 0.94 1 47 1 47 47 0 0 275 W5PES8 Uncharacterized protein OS=Ovis aries GN=CCKAR PE=4 SV=1
31 : W5PET0_SHEEP 0.85 0.94 1 47 16 62 47 0 0 452 W5PET0 Uncharacterized protein (Fragment) OS=Ovis aries GN=CCKAR PE=4 SV=1
32 : F7AHW8_HORSE 0.81 0.89 1 47 1 47 47 0 0 428 F7AHW8 Uncharacterized protein OS=Equus caballus GN=CCKAR PE=3 SV=1
33 : G1PWB1_MYOLU 0.81 0.89 1 47 1 47 47 0 0 429 G1PWB1 Uncharacterized protein OS=Myotis lucifugus GN=CCKAR PE=3 SV=1
34 : CCKAR_RABIT 0.79 0.83 1 47 1 47 47 0 0 427 O97772 Cholecystokinin receptor type A OS=Oryctolagus cuniculus GN=CCKAR PE=2 SV=1
35 : F6YC15_MONDO 0.79 0.94 1 47 11 57 47 0 0 439 F6YC15 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=CCKAR PE=3 SV=1
36 : F7G0G9_MONDO 0.79 0.94 1 47 1 47 47 0 0 445 F7G0G9 Uncharacterized protein OS=Monodelphis domestica GN=CCKAR PE=3 SV=2
37 : G1T5F5_RABIT 0.79 0.83 1 47 12 58 47 0 0 437 G1T5F5 Cholecystokinin receptor type A (Fragment) OS=Oryctolagus cuniculus GN=CCKAR PE=3 SV=1
38 : G3VBA0_SARHA 0.79 0.91 1 47 16 62 47 0 0 443 G3VBA0 Uncharacterized protein (Fragment) OS=Sarcophilus harrisii GN=CCKAR PE=3 SV=1
39 : CCKAR_CANFA 0.74 0.87 1 47 1 47 47 0 0 428 Q5D0K2 Cholecystokinin receptor type A OS=Canis familiaris GN=CCKAR PE=2 SV=1
40 : Q1HE08_PIG 0.74 0.91 1 46 1 46 46 0 0 120 Q1HE08 Cholecystokinin type A receptor (Fragment) OS=Sus scrofa PE=4 SV=1
41 : S7PUX8_MYOBR 0.68 0.84 1 44 1 44 44 0 0 418 S7PUX8 Cholecystokinin receptor type A OS=Myotis brandtii GN=D623_10027375 PE=3 SV=1
42 : K7GFA5_PELSI 0.47 0.80 1 47 1 49 49 2 2 428 K7GFA5 Uncharacterized protein OS=Pelodiscus sinensis GN=CCKAR PE=3 SV=1
43 : A0ZPS0_CHICK 0.45 0.73 6 47 7 50 44 2 2 429 A0ZPS0 Cholecystokinin type 1 receptor OS=Gallus gallus GN=CCK1R PE=2 SV=1
44 : E5RVJ6_CHICK 0.45 0.73 6 47 7 50 44 2 2 429 E5RVJ6 Cholecystokinin type A receptor OS=Gallus gallus GN=CCKAR PE=3 SV=1
45 : E5RVJ7_CHICK 0.45 0.73 6 47 7 50 44 2 2 429 E5RVJ7 Cholecystokinin type A receptor OS=Gallus gallus GN=CCKAR PE=3 SV=1
46 : G1NIH9_MELGA 0.45 0.73 6 47 8 51 44 2 2 430 G1NIH9 Uncharacterized protein (Fragment) OS=Meleagris gallopavo GN=CCKAR PE=3 SV=1
47 : M7BZ71_CHEMY 0.43 0.77 6 47 7 50 44 2 2 429 M7BZ71 Cholecystokinin receptor type A OS=Chelonia mydas GN=UY3_05421 PE=3 SV=1
## ALIGNMENTS 1 - 47
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M 0 0 76 43 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMM
2 2 A D + 0 0 174 43 9 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDEEDDDDDDDEDDE
3 3 A V S S- 0 0 105 43 28 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVAAIIAIVVAI
4 4 A V > + 0 0 86 43 21 VVVVVVVVVVVVVVVVVVVVVVVVVVVVLVVDIVIIVVAVIV
5 5 A D T 4 S+ 0 0 91 43 17 DDDDDDDDDDDDDDDDDDNDDDDDDDDDDDDDDADDADDHDD
6 6 A S T >> S+ 0 0 91 48 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
7 7 A L T 34>S+ 0 0 125 48 8 LLLLLLLLLLLLLLLFFLLLLLLLLLLLLLLLFLLLLLLLFLFFFFL
8 8 A L T 3<5S+ 0 0 18 48 4 LLLLLLLLLLLLLLLLLLLLLLFLLFLLLLLLLLFFLFLLLLLLLLL
9 9 A V T <45S+ 0 0 83 48 76 VVVVVVVVVVVVMMMVVVVVMMVVVVMVVMMVVGLLGLGMVEEEEEE
10 10 A N T <5S- 0 0 135 48 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
11 11 A G T 5S+ 0 0 50 48 35 GGGGGGGGGGGGGGGGGAGGEEGGGGEGGEEGGAGGAGGGGGSSSSG
12 12 A S < + 0 0 11 48 39 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTTTTT
13 13 A N S S- 0 0 14 48 9 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGNNGNDNNNNNNNN
14 14 A I S S+ 0 0 92 48 9 IIIIIIIIIIIIIIIIIIIILLIIIILIILLIIIIIIIVIIIIIIII
15 15 A T S S- 0 0 30 48 31 TTTTTTTTSSTATTTTTTTTTTTTTTTTTTTPTPTTPTPTTstttts
16 16 A P - 0 0 92 48 73 PPPPPPPPPPPPPPPPPPPPPPSPPSPLPPPPLPPPPPPPLlllllf
17 17 A P + 0 0 99 48 62 PPPPPPPPPPPPPPPPPPPPPPAPPAPPPPPPPPPPPPPPPLLLLLL
18 18 A a B +A 28 0A 55 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
19 19 A E - 0 0 142 48 16 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDDDDD
20 20 A L - 0 0 97 48 23 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIIIIII
21 21 A G S S+ 0 0 64 48 62 GGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGVLLLLV
22 22 A L S S+ 0 0 161 48 26 LLLLLLLLLLIILLLLLLIFIIFIIFILIIIVILLLLILIIMLLLLM
23 23 A E S S- 0 0 86 48 5 EEEEEEEEEEEEEEEEEEEEEEEDDEEEEEEEEDEEDEEEEEEEEEE
24 24 A N S S+ 0 0 161 48 0 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
25 25 A E S S- 0 0 123 48 5 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEED
26 26 A T + 0 0 35 48 0 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
27 27 A L + 0 0 127 48 11 LLLLLLLLLLLLLLLLLLLLLLLLLLLFLLLLLLFFLFLLLFFFFFF
28 28 A F B S-A 18 0A 87 48 12 FFFFFFFFFFFFFFFFFFFFFFFYYFFFFFFSFFFFFFVFFFYYYYF
29 29 A a S S+ 0 0 77 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
30 30 A L - 0 0 41 48 19 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLVVVVV
31 31 A D - 0 0 73 48 6 DDDDDDDDDDDDDDDDDDDDDDDEEDDDDDDNDDDDDDEDDDDDDDD
32 32 A Q - 0 0 102 48 51 QQQQQQQQQQQQQQQQQRQRQQRQQRQQQQQERQPPQLQQRDDDDDD
33 33 A P - 0 0 29 48 12 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPspppps
34 34 A R S S+ 0 0 157 48 80 RRRRRRRRHHHRQQQHHHHQHHRYYRHNHRRRLPRRPRRHLhyyyyh
35 35 A P S S- 0 0 63 48 31 PPPPPPPPPPPPPPPSSPPPPPPPPPPPSPPPPPPPPPAPPPSSSSP
36 36 A S + 0 0 71 48 24 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPPSPASSASSSSA
37 37 A K S S- 0 0 106 48 6 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKQKKKKKKK
38 38 A E S > S+ 0 0 53 48 32 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDDEVEVADDDDDD
39 39 A W H > S+ 0 0 1 48 40 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWQRLLLLLL
40 40 A Q H > S+ 0 0 48 48 37 QQQQQQQQQQQQQQQQQQQWQQQQQQQQQQQQQQQQQQQPRHHHHHH
41 41 A P H > S+ 0 0 18 48 55 PPPPPPPPPPPPSSSPPPPPPPPPPPPPLPPPPPPPPPPAVQQQQQQ
42 42 A A H < S+ 0 0 5 48 52 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAVGTIIIIT
43 43 A Q H < S+ 0 0 16 48 22 VVVVVVVVVVVVVLLVVVVVVVVVVVVVVVVVVVVVVVVQIVIIIIV
44 44 A V H < S+ 0 0 89 48 48 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQINRRRRRR
45 45 A I S < S- 0 0 131 47 2 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIL IIIIII
46 46 A L 0 0 128 47 4 LLLLLLLLLLLLLLLLLLLLLLLLLLLSLLLLLLLLLLLL LLLLLL
47 47 A L 0 0 110 46 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLL
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 0 91 43 0 0 0.309 10 0.91
3 3 A 81 0 9 0 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 43 0 0 0.609 20 0.71
4 4 A 84 2 9 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 2 43 0 0 0.632 21 0.79
5 5 A 0 0 0 0 0 0 0 0 5 0 0 0 0 2 0 0 0 0 2 91 43 0 0 0.406 13 0.83
6 6 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
7 7 A 0 83 0 0 17 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.451 15 0.91
8 8 A 0 90 0 0 10 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.334 11 0.96
9 9 A 56 6 0 19 0 0 0 6 0 0 0 0 0 0 0 0 0 13 0 0 48 0 0 1.244 41 0.24
10 10 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 48 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 75 6 0 8 0 0 0 0 0 0 10 0 0 48 0 0 0.832 27 0.65
12 12 A 0 0 0 0 0 0 0 0 0 0 88 13 0 0 0 0 0 0 0 0 48 0 0 0.377 12 0.61
13 13 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 94 2 48 0 0 0.274 9 0.90
14 14 A 2 10 88 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.433 14 0.91
15 15 A 0 0 0 0 0 0 0 0 2 8 8 81 0 0 0 0 0 0 0 0 48 0 6 0.664 22 0.69
16 16 A 0 17 0 0 2 0 0 0 0 77 4 0 0 0 0 0 0 0 0 0 48 0 0 0.712 23 0.27
17 17 A 0 13 0 0 0 0 0 0 4 83 0 0 0 0 0 0 0 0 0 0 48 0 0 0.544 18 0.38
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 88 0 13 48 0 0 0.377 12 0.84
20 20 A 0 88 13 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.377 12 0.77
21 21 A 4 8 0 0 0 0 0 85 0 0 0 0 0 0 2 0 0 0 0 0 48 0 0 0.555 18 0.38
22 22 A 2 56 31 4 6 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 1.073 35 0.74
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 92 0 8 48 0 0 0.287 9 0.95
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 48 0 0 0.000 0 1.00
25 25 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 96 0 4 48 0 0 0.173 5 0.94
26 26 A 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
27 27 A 0 79 0 0 21 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.512 17 0.89
28 28 A 2 0 0 0 83 0 13 0 0 0 2 0 0 0 0 0 0 0 0 0 48 0 0 0.573 19 0.87
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
30 30 A 10 90 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 0 0 0.334 11 0.80
31 31 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 2 92 48 0 0 0.334 11 0.93
32 32 A 0 2 0 0 0 0 0 0 0 4 0 0 0 0 13 0 67 2 0 13 48 0 0 1.084 36 0.48
33 33 A 0 0 0 0 0 0 0 0 0 96 4 0 0 0 0 0 0 0 0 0 48 0 6 0.173 5 0.88
34 34 A 0 4 0 0 0 0 13 0 0 4 0 0 0 29 40 0 8 0 2 0 48 0 0 1.539 51 0.20
35 35 A 0 0 0 0 0 0 0 0 2 83 15 0 0 0 0 0 0 0 0 0 48 0 0 0.513 17 0.68
36 36 A 0 0 0 0 0 0 0 0 6 6 88 0 0 0 0 0 0 0 0 0 48 0 0 0.463 15 0.76
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 96 2 0 0 0 48 0 0 0.202 6 0.94
38 38 A 4 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 77 0 17 48 0 0 0.712 23 0.67
39 39 A 0 13 0 0 0 83 0 0 0 0 0 0 0 0 2 0 2 0 0 0 48 0 0 0.573 19 0.59
40 40 A 0 0 0 0 0 2 0 0 0 2 0 0 0 13 2 0 81 0 0 0 48 0 0 0.671 22 0.62
41 41 A 2 2 0 0 0 0 0 0 2 75 6 0 0 0 0 0 13 0 0 0 48 0 0 0.891 29 0.44
42 42 A 2 0 8 0 0 0 0 2 83 0 0 4 0 0 0 0 0 0 0 0 48 0 0 0.653 21 0.48
43 43 A 81 4 10 0 0 0 0 0 0 0 0 0 0 0 0 0 4 0 0 0 48 0 0 0.669 22 0.77
44 44 A 2 0 2 0 0 0 0 0 0 0 0 0 0 0 13 0 81 0 2 0 48 0 0 0.671 22 0.51
45 45 A 0 2 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.97
46 46 A 0 98 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.95
47 47 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 46 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
42 16 16 1 sAl
42 34 35 1 sPh
43 11 17 1 tAl
43 29 36 1 pPy
44 11 17 1 tAl
44 29 36 1 pPy
45 11 17 1 tAl
45 29 36 1 pPy
46 11 18 1 tAl
46 29 37 1 pPy
47 11 17 1 sAf
47 29 36 1 sPh
//