Complet list of 1c5a hssp file
Complete list of 1c5a.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1C5A
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-03
HEADER COMPLEMENT FACTOR 12-JUN-90 1C5A
COMPND MOL_ID: 1; MOLECULE: COMPLEMENT C5A ANAPHYLATOXIN; CHAIN: A; ENGINEERE
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: SUS SCROFA DOMESTICA; ORGANISM_COMMON:
AUTHOR M.P.WILLIAMSON,V.S.MADISON
DBREF 1C5A A 1 73 UNP P01032 CO5_PIG 1 73
SEQLENGTH 65
NCHAIN 1 chain(s) in 1C5A data set
NALIGN 71
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : CO5_PIG 1C5A 1.00 1.00 1 65 1 65 65 0 0 74 P01032 Complement C5a anaphylatoxin OS=Sus scrofa GN=C5 PE=1 SV=1
2 : F1SME1_PIG 0.98 1.00 1 65 609 673 65 0 0 1608 F1SME1 Complement C5a anaphylatoxin (Fragment) OS=Sus scrofa GN=C5 PE=4 SV=2
3 : Q6VPV1_PIG 0.98 1.00 1 65 678 742 65 0 0 1677 Q6VPV1 Complement component C5 OS=Sus scrofa PE=2 SV=1
4 : CO5_BOVIN 0.77 0.88 1 65 1 65 65 0 0 74 P12082 Complement C5a anaphylatoxin OS=Bos taurus GN=C5 PE=1 SV=1
5 : F1P7J4_CANFA 0.75 0.88 1 64 678 741 64 0 0 1689 F1P7J4 Uncharacterized protein OS=Canis familiaris PE=4 SV=2
6 : L5KCH9_PTEAL 0.75 0.88 2 65 809 872 64 0 0 1552 L5KCH9 Complement C5 OS=Pteropus alecto GN=PAL_GLEAN10009803 PE=4 SV=1
7 : F1MY85_BOVIN 0.74 0.88 1 65 678 742 65 0 0 1677 F1MY85 Complement C5a anaphylatoxin OS=Bos taurus GN=C5 PE=2 SV=2
8 : L8J0E1_9CETA 0.74 0.88 1 65 678 742 65 0 0 1677 L8J0E1 Complement C5 OS=Bos mutus GN=M91_04256 PE=4 SV=1
9 : M3Y8A3_MUSPF 0.74 0.85 1 65 678 742 65 0 0 1678 M3Y8A3 Uncharacterized protein OS=Mustela putorius furo GN=C5 PE=4 SV=1
10 : Q1A7A4_BOVIN 0.74 0.88 1 65 1 65 65 0 0 74 Q1A7A4 Complement component C5a (Fragment) OS=Bos taurus PE=2 SV=1
11 : U6CQK6_NEOVI 0.74 0.85 1 65 678 742 65 0 0 1678 U6CQK6 Complement C5 OS=Neovison vison GN=CO5 PE=2 SV=1
12 : F7D7B5_HORSE 0.72 0.89 1 65 650 714 65 0 0 899 F7D7B5 Uncharacterized protein (Fragment) OS=Equus caballus GN=C5 PE=4 SV=1
13 : D2H306_AILME 0.71 0.85 1 65 656 720 65 0 0 1654 D2H306 Putative uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=PANDA_004043 PE=4 SV=1
14 : G1L2Q2_AILME 0.71 0.85 1 65 678 742 65 0 0 1682 G1L2Q2 Uncharacterized protein OS=Ailuropoda melanoleuca GN=C5 PE=4 SV=1
15 : M3VV58_FELCA 0.71 0.88 1 65 679 743 65 0 0 1678 M3VV58 Uncharacterized protein OS=Felis catus GN=C5 PE=4 SV=1
16 : H2PT89_PONAB 0.70 0.89 2 65 679 742 64 0 0 1676 H2PT89 Uncharacterized protein OS=Pongo abelii GN=C5 PE=4 SV=1
17 : G1PEA2_MYOLU 0.69 0.86 1 65 682 746 65 0 0 1683 G1PEA2 Uncharacterized protein OS=Myotis lucifugus GN=C5 PE=4 SV=1
18 : G1S5G0_NOMLE 0.69 0.88 1 64 678 741 64 0 0 1676 G1S5G0 Uncharacterized protein OS=Nomascus leucogenys GN=C5 PE=4 SV=1
19 : G3QIN8_GORGO 0.69 0.88 2 65 679 742 64 0 0 1587 G3QIN8 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101138867 PE=4 SV=1
20 : G3SBU0_GORGO 0.69 0.88 2 65 684 747 64 0 0 1683 G3SBU0 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101138867 PE=4 SV=1
21 : S7NGX8_MYOBR 0.69 0.86 1 65 678 742 65 0 0 1675 S7NGX8 Complement C5 OS=Myotis brandtii GN=D623_10016994 PE=4 SV=1
22 : CO5_HUMAN 1XWE 0.68 0.89 2 64 679 741 63 0 0 1676 P01031 Complement C5 OS=Homo sapiens GN=C5 PE=1 SV=4
23 : H0XZG5_OTOGA 0.68 0.80 1 65 683 747 65 0 0 1689 H0XZG5 Uncharacterized protein OS=Otolemur garnettii GN=C5 PE=4 SV=1
24 : Q59GS8_HUMAN 0.68 0.89 2 64 750 812 63 0 0 1106 Q59GS8 Complement component 5 variant (Fragment) OS=Homo sapiens PE=2 SV=1
25 : H2QXT1_PANTR 0.67 0.86 1 64 678 741 64 0 0 1676 H2QXT1 Uncharacterized protein OS=Pan troglodytes GN=C5 PE=4 SV=1
26 : F7GHV1_MACMU 0.66 0.85 1 65 678 742 65 0 0 1675 F7GHV1 Uncharacterized protein OS=Macaca mulatta PE=4 SV=1
27 : G7PRJ3_MACFA 0.66 0.85 1 65 678 742 65 0 0 1676 G7PRJ3 C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4 OS=Macaca fascicularis GN=EGM_06682 PE=4 SV=1
28 : F6VYC9_CALJA 0.63 0.83 1 60 744 803 60 0 0 1100 F6VYC9 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=C5 PE=4 SV=1
29 : F6WH83_CALJA 0.63 0.83 1 60 679 738 60 0 0 1677 F6WH83 Uncharacterized protein OS=Callithrix jacchus GN=C5 PE=4 SV=1
30 : G5AXS5_HETGA 0.63 0.87 2 64 679 741 63 0 0 1657 G5AXS5 Complement C5 OS=Heterocephalus glaber GN=GW7_09763 PE=4 SV=1
31 : G7NG17_MACMU 0.63 0.86 7 65 538 596 59 0 0 1462 G7NG17 C3 and PZP-like alpha-2-macroglobulin domain-containing protein 4 OS=Macaca mulatta GN=EGK_07369 PE=4 SV=1
32 : A2AS37_MOUSE 0.62 0.83 2 61 265 324 60 0 0 356 A2AS37 Protein AI182371 OS=Mus musculus GN=AI182371 PE=2 SV=2
33 : CO5_MOUSE 0.62 0.83 1 64 682 745 64 0 0 1680 P06684 Complement C5 OS=Mus musculus GN=C5 PE=1 SV=2
34 : I3MKC9_SPETR 0.62 0.81 2 65 679 742 64 0 0 1676 I3MKC9 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=C5 PE=4 SV=1
35 : Q14BD9_MOUSE 0.62 0.83 2 61 257 316 60 0 0 348 Q14BD9 Expressed sequence AI182371 OS=Mus musculus GN=AI182371 PE=2 SV=1
36 : Q505K6_MOUSE 0.62 0.83 2 61 257 316 60 0 0 333 Q505K6 AI182371 protein OS=Mus musculus GN=AI182371 PE=2 SV=1
37 : Q8BNV3_MOUSE 0.62 0.84 1 61 682 742 61 0 0 742 Q8BNV3 Putative uncharacterized protein (Fragment) OS=Mus musculus GN=Hc PE=2 SV=1
38 : Q8BWN9_MOUSE 0.62 0.83 2 61 257 316 60 0 0 348 Q8BWN9 Expressed sequence AI182371 OS=Mus musculus GN=AI182371 PE=2 SV=1
39 : Q8BWS8_MOUSE 0.62 0.83 2 61 276 335 60 0 0 352 Q8BWS8 Putative uncharacterized protein OS=Mus musculus GN=AI182371 PE=2 SV=1
40 : G3TAK1_LOXAF 0.61 0.86 7 65 561 619 59 0 0 1533 G3TAK1 Uncharacterized protein (Fragment) OS=Loxodonta africana PE=4 SV=1
41 : H0UY41_CAVPO 0.61 0.84 2 65 457 520 64 0 0 1460 H0UY41 Uncharacterized protein (Fragment) OS=Cavia porcellus GN=LOC100733000 PE=4 SV=1
42 : F1LWA9_RAT 0.60 0.85 2 61 257 316 60 0 0 329 F1LWA9 Protein RGD1308742 (Fragment) OS=Rattus norvegicus GN=RGD1308742 PE=4 SV=2
43 : G1SPF9_RABIT 0.60 0.78 1 65 678 742 65 0 0 1678 G1SPF9 Uncharacterized protein OS=Oryctolagus cuniculus GN=C5 PE=4 SV=2
44 : L9K4I4_TUPCH 0.60 0.84 7 64 465 522 58 0 0 1375 L9K4I4 Complement C5 OS=Tupaia chinensis GN=TREES_T100001863 PE=4 SV=1
45 : G5AXS4_HETGA 0.59 0.88 2 65 445 507 64 1 1 799 G5AXS4 Complement C5 (Fragment) OS=Heterocephalus glaber GN=GW7_09762 PE=4 SV=1
46 : CO5_RAT 0.58 0.81 1 64 4 67 64 0 0 77 P08650 Complement C5 (Fragment) OS=Rattus norvegicus GN=C5 PE=1 SV=2
47 : G3IHN2_CRIGR 0.53 0.78 7 64 378 435 58 0 0 498 G3IHN2 Complement C5 OS=Cricetulus griseus GN=I79_023328 PE=4 SV=1
48 : T0M981_9CETA 0.53 0.81 8 64 81 136 57 1 1 174 T0M981 Uncharacterized protein OS=Camelus ferus GN=CB1_001603008 PE=4 SV=1
49 : F6URG6_MONDO 0.51 0.70 2 64 680 741 63 1 1 1634 F6URG6 Uncharacterized protein OS=Monodelphis domestica GN=C5 PE=4 SV=1
50 : K7E0N8_MONDO 0.51 0.70 2 64 680 741 63 1 1 1659 K7E0N8 Uncharacterized protein OS=Monodelphis domestica GN=C5 PE=4 SV=1
51 : M3WUW9_FELCA 0.51 0.83 2 64 658 719 63 1 1 801 M3WUW9 Uncharacterized protein (Fragment) OS=Felis catus PE=4 SV=1
52 : G3WZ02_SARHA 0.46 0.70 2 64 681 742 63 1 1 1679 G3WZ02 Uncharacterized protein OS=Sarcophilus harrisii GN=C5 PE=4 SV=1
53 : E1BRS7_CHICK 0.45 0.67 12 65 694 748 55 1 1 1683 E1BRS7 Uncharacterized protein OS=Gallus gallus PE=4 SV=1
54 : R0JIF4_ANAPL 0.45 0.65 12 65 515 569 55 1 1 1501 R0JIF4 Complement C5 (Fragment) OS=Anas platyrhynchos GN=Anapl_15071 PE=4 SV=1
55 : H3AWN3_LATCH 0.44 0.71 2 62 684 745 62 1 1 1691 H3AWN3 Uncharacterized protein OS=Latimeria chalumnae GN=C5 PE=4 SV=2
56 : U3IIY3_ANAPL 0.44 0.68 5 65 546 607 62 1 1 1542 U3IIY3 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=C5 PE=4 SV=1
57 : U3JGI0_FICAL 0.43 0.62 2 65 459 523 65 1 1 1455 U3JGI0 Uncharacterized protein OS=Ficedula albicollis GN=C5 PE=4 SV=1
58 : G1MWZ9_MELGA 0.42 0.66 2 65 681 745 65 1 1 1677 G1MWZ9 Uncharacterized protein OS=Meleagris gallopavo GN=C5 PE=4 SV=1
59 : M7BYV8_CHEMY 0.41 0.61 8 65 371 429 59 1 1 649 M7BYV8 Complement C3 OS=Chelonia mydas GN=UY3_05582 PE=4 SV=1
60 : F6YF42_MONDO 0.40 0.57 2 65 670 734 65 1 1 1624 F6YF42 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=C3 PE=4 SV=2
61 : F6ZDV8_MONDO 0.40 0.57 2 65 670 734 65 1 1 1632 F6ZDV8 Uncharacterized protein (Fragment) OS=Monodelphis domestica GN=C3 PE=4 SV=2
62 : H0Z873_TAEGU 0.40 0.63 2 65 652 716 65 1 1 1652 H0Z873 Uncharacterized protein (Fragment) OS=Taeniopygia guttata GN=C5 PE=4 SV=1
63 : K7FAC1_PELSI 0.40 0.68 2 65 681 745 65 1 1 1678 K7FAC1 Uncharacterized protein OS=Pelodiscus sinensis GN=C5 PE=4 SV=1
64 : K7FAC8_PELSI 0.40 0.68 2 65 682 746 65 1 1 1684 K7FAC8 Uncharacterized protein OS=Pelodiscus sinensis GN=C5 PE=4 SV=1
65 : CO3_CAVPO 0.38 0.58 2 65 679 743 65 1 1 1666 P12387 Complement C3 OS=Cavia porcellus GN=C3 PE=1 SV=2
66 : Q804B3_NOTVI 0.38 0.59 2 60 26 88 63 2 4 434 Q804B3 Complement component C5 (Fragment) OS=Notophthalmus viridescens PE=2 SV=1
67 : Q90WT5_CRONI 0.38 0.52 2 65 43 107 65 1 1 401 Q90WT5 Putative complement component c3 (Fragment) OS=Crocodylus niloticus GN=c3 PE=2 SV=1
68 : V9K7W3_CALMI 0.38 0.62 5 63 677 736 60 1 1 1439 V9K7W3 Complement component 5 protein OS=Callorhynchus milii PE=2 SV=1
69 : G3RMX6_GORGO 0.37 0.63 12 64 664 717 54 1 1 1638 G3RMX6 Uncharacterized protein (Fragment) OS=Gorilla gorilla gorilla GN=101123861 PE=4 SV=1
70 : F6XIH8_ORNAN 0.34 0.60 2 64 309 371 65 2 4 1311 F6XIH8 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=C5 PE=4 SV=1
71 : F6XII7_ORNAN 0.34 0.60 2 64 309 371 65 2 4 1315 F6XII7 Uncharacterized protein (Fragment) OS=Ornithorhynchus anatinus GN=C5 PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A M > 0 0 171 28 3 MMMMM MMMMMMMMM MM M M MMMMM L L M L
2 2 A L H > + 0 0 66 61 5 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLLLL LLL LL LLLL F FF LLFFFLFL L
3 3 A Q H > S+ 0 0 123 61 64 QQQKRYKKQKRQRRQQQQQQQQQQQQQKKQ RRQRRRRR QVQ KH QQKK E KE MMKEEMDI K
4 4 A K H > S+ 0 0 107 61 50 KKKKKKKKKKKKKKKKEKKKEKKKKEEKKE QQQQQQQQ EQQ EQ KKEE K EE EEEEEEDE E
5 5 A K H X S+ 0 0 59 63 37 KKKKKKKKKKKRKKKKKKAAKKKKKKKKKK KKKKKKKK KKK KK EEKE QKKR IIKEERKHK K
6 6 A I H X S+ 0 0 33 63 29 IIIIIIIIIIIIIIIIIIIIIIIIIIIIII IIIIIIII III IV LLII VIIV RRIIIRRKI I
7 7 A E H X S+ 0 0 89 67 58 EEEEEEEEEEEEEEQEGEEEGEEEGEEDDQQNEKNNENNEQNQQDEQ EEED EQLL NNLQQMIAR D
8 8 A E H X S+ 0 0 100 69 41 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEENKEEEEEHQKKSK QHKKNDDKNNDESK E
9 9 A E H < S+ 0 0 10 69 74 EEEEEQEEEEEEEEEIQIIIQIAIIIIIIQNQQQQQQQQKQQANQQHDKKLK EIEEKKKERRKAKK K
10 10 A A H < S+ 0 0 20 69 34 AAAAAVAAAAAVVVVAAAAAAAAAAAAAAAAAAAAAAAATAAAAAAAAAAAA LSVATAAVAAALVI A
11 11 A A H < S+ 0 0 63 69 38 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASADSSASSAASAATAASAASA SSASAGGASSGNAA S
12 12 A K >< + 0 0 69 72 41 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKTKKTTKTTKKKKKKKKTQQTQKKRKKKDQQKKKKSNTKT
13 13 A Y T 3 + 0 0 120 72 5 YYYYYYYYHYHYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFYYFYYYFYYYYYYYYYYFYYFY
14 14 A K T 3 S+ 0 0 202 72 28 KKKRKKRRKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKQKKRLLKKHAKQ
15 15 A Y S <> S+ 0 0 142 72 53 YYYNQYNNHNHHHHHHLHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHHNHHNHDHDDDDHHSNDSTK
16 16 A A H > + 0 0 52 72 76 AAAAAAAAAAAAAATSMSSSMSQSSLLSSPLPSPPPSPPAVPPEPRRSPPPVLPPPPLQKKPPPKIQQES
17 17 A M H > S+ 0 0 139 72 81 MMMWVKWWIWIKIIVVQVVVQVIVVVVVVVVMVVMMVMMVVVVVLVVLRRLHEATAEEANNEEEEVKDLL
18 18 A L H > S+ 0 0 42 72 58 LLLVLLVVLVLILLLVVVVVVVPVVVVMMPVIPPIIPIIVLIVVLPPIVVIVIIYIAIVLLAIILMLAEY
19 19 A K H X S+ 0 0 38 72 28 KKKKKKKKRKRKKKKKKKKKKKRKKKKKKRKKKKKKKKKKRKKKRKRQRRQKRKKKRRKRRRRRRRKQQK
20 20 A K H X S+ 0 0 86 72 33 KKKKKKKKKKKRKKKKKKKKKKKKKKKRRRKKKKKKKKKKKKRKKKKKKKKSKNKNKKKIIQKKRKKKKC
21 21 A a H X S+ 0 0 5 72 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A b H >X S+ 0 0 0 72 10 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
23 23 A Y H 3X S+ 0 0 64 72 63 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYLYYYLYYYYYMMLMMMEEEMMMELEFEQ
24 24 A D H 3< S+ 0 0 51 72 31 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDHDDDHDDDSHADAAHDDDAAADDDDAG
25 25 A G H << S+ 0 0 3 72 4 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGA
26 26 A A H < S+ 0 0 44 72 54 AAAAAAAAAAAAAAAAAAAAAAAAAVVAAAVAAAAAAAAAAAAAAAAAAAAAVVIVVVMMMVVVMMMMLH
27 27 A Y < + 0 0 128 72 81 YYYHNNHHHHHFFFYRYSCCYCRCCRRRRRRRRRRRRRRSRRHKRRRYTTFHKKKKKKYRRKTTRKYKRK
28 28 A R + 0 0 12 72 93 RRRRRRRRLRLRLLRVRVVVRVLVVIIDDRIYVRYYVYYRRYRRHELRKKKKAAAAAVEPPAEEEGEEET
29 29 A N + 0 0 124 71 54 NNNNNNNNNNNNNNNNNNNNNNVNNNNNNNNNNNNNNNNNNNNNDNN.TTSSyyyyyynnnyssnynysA
30 30 A D S S- 0 0 67 65 90 DDDDYDDDYDYDYYENDNNNDNDNNHHYYDHIFDIIFIIDDEDF.KEG....vvivvvmmmvllmtmvv.
31 31 A D + 0 0 97 70 75 DDDDDDDDDDDLYYDDDDDDDDDDDDDDDDDHYDHHYHHDYHDDYYYEHHEHSSTSSSGHHSLLQEGIG.
32 32 A E S S- 0 0 73 72 30 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEHYYEEEFEHQLD
33 33 A T >> - 0 0 88 72 32 TTTTTSTTTTTTTTDTSTTTSTTTTTTTTNTTTTTTTTTSSTTTSTTTTTSTTTTTTTSTTTTTSTSSSS
34 34 A c H 3> S+ 0 0 12 72 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
35 35 A E H 34 S+ 0 0 83 72 49 EEEEEEEEEEEEEEEEEEEEEEEEEEEQQEEVEEVVEVVDAVEDEEAEEEEESSDSRSEEERDDQEDDES
36 36 A E H X> S+ 0 0 96 72 49 EEEEQQQQRQRQQQQQQQQQQQQQQQQQQEQQEQQQEQQQQQQQKQQEKKQQDDQDEDKRRDQQRVKEEV
37 37 A R H 3X S+ 0 0 105 72 0 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRR
38 38 A A H 3< S+ 0 0 8 72 32 AAAAAAAAAAAAAAAAAAAAAALAAAAAAVAAVVAAVAAAAALAAVVALLALAAAAAAATTAAAAAAATA
39 39 A A H <4 S+ 0 0 71 72 59 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAEAAAEEAARRRRQRGKKQQQRGVSWS
40 40 A R H < S+ 0 0 118 72 29 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRHRRRRRRRRKRRRRRRRYYYRRRYRYRHR
41 41 A I < + 0 0 47 72 11 IIIIIIIIIIIIIIIIIIIIIIVIIIIIIVIVVIVVVVVIIVVIIVVIVVIVIIIIIIIIIIIIVIIIVV
42 42 A K + 0 0 159 72 73 KKKAKTQQKQKTKKTSKTSSKSTSSSSTTTSKTTKKTKKTTTTTTTTTKKTKQRRRRQLLLRNNSKQKRT
43 43 A I S S- 0 0 122 72 77 IIIIVVAAIAIIIIIILVIILLILLVVLLIVIIVIIIIIIVIKLVIIIEELQSSKSRSDDDRSSLDDLHS
44 44 A G > - 0 0 19 72 41 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGHGGGGHNGNNHTGGSIIGrTGGk
45 45 A P H > S+ 0 0 107 72 50 PPPPPPPPPPPPPPPPPPPPPPPPLPPPPPPPPPPPPPPPPPPSPPPPQQPKAEEEQPAEEQSSEpKAPv
46 46 A K H > S+ 0 0 106 72 77 KKKEWKIIRIKRRRRRRRRRRRIRRRRRRRRILFIILIIRHNHRRHNKFFRFKKQKRKEEERRRAREPAK
47 47 A a H > S+ 0 0 0 72 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
48 48 A V H X S+ 0 0 54 72 39 VVVIAVIIIIIVVVVVIIVVIIRIVVVVVIVVIIVVIVVIIVAVIIVAIISIVIFIIIKVVIIIVIVKVG
49 49 A K H X S+ 0 0 119 72 56 KKKKKTKKKKKQRRRKQKKKQKKKKKKKKQKKRRKKRKKARKRAQRRREERESSKSSSKKKSKKKEADAR
50 50 A A H X S+ 0 0 0 72 22 AAAAAAAAIAVVIIIAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIAV
51 51 A F H X S+ 0 0 13 72 0 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
52 52 A K H X S+ 0 0 76 72 76 KKKKRKKKKKKKKKKTMTTTMTNTTTTTTNTTNNTTNTTNNSNNKNNTKKSRRRRRTILLLTKKLKLLLK
53 53 A D H X S+ 0 0 12 72 59 DDDSAESSDSEDEEEENEEENEEEEEEEEEELEELLELLEELEAEEEQSSQTHDYDDNDDDDDDDRDEDE
54 54 A b H X S+ 0 0 8 72 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
55 55 A c H X S+ 0 0 2 72 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
56 56 A Y H X S+ 0 0 67 72 88 YYYADAAAIAIAIILVTVVVTVTVVVVVVIVNTINNTNNITESILTINEEELEEQEEENRREEETRKKHE
57 57 A I H X S+ 0 0 69 72 48 IIIIIIIIIIIIIIIVIVVVIVIVVVVAALVMIIMMIMMVLIILLIILLLLFFFFFFFYYYFFFYLYFLL
58 58 A A H X S+ 0 0 10 72 22 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAIIIAAAMVIASA
59 59 A N H X S+ 0 0 51 72 76 NNNSSNSSSSNECCKSHSSSHSNSSSSAANSHNKHHNHHKNHRINDTTFFNSNNNNNNKSSNTTAEKEET
60 60 A Q H < S+ 0 0 110 72 53 QQQQQKQQQQQQQQKQLQQQLQQQQQQEEKQQKQQQKQQKKQQKQKKKQQQKRRKRKRTKKKQQQETETE
61 61 A V H X S+ 0 0 75 69 39 VVVFHFFFIFILLLHLFHLLFLVLLLL ILIIYIIIIIFIMFLIIILIILMLLLLLLIVVLLLL ILLV
62 62 A R H < S+ 0 0 84 62 4 RRRRRRRRRRRRRRRRRRRRRRRRRRR RR RR RR RRRRRRRRRRRRRRRRRRRRRRR RRTR
63 63 A A T < S+ 0 0 85 61 72 AAAATSAADADADDDAAAAAAASAAAA AA KD DA DAAKQMSSEIEE ELEDLLLEEQ DTRA
64 64 A E T 4 0 0 138 60 49 EEEDDEDDKDKNKKENENNNENSNNNN EN EA EE KEEEEEKKEEEE EEEEQQEKKQ E EN
65 65 A Q < 0 0 148 42 48 QEEE EEEEEEEEEDNE NNE H NN N D ND H E EE EEERKKEEEH K
## ALIGNMENTS 71 - 71
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A M > 0 0 171 28 3
2 2 A L H > + 0 0 66 61 5 L
3 3 A Q H > S+ 0 0 123 61 64 K
4 4 A K H > S+ 0 0 107 61 50 E
5 5 A K H X S+ 0 0 59 63 37 K
6 6 A I H X S+ 0 0 33 63 29 I
7 7 A E H X S+ 0 0 89 67 58 D
8 8 A E H X S+ 0 0 100 69 41 E
9 9 A E H < S+ 0 0 10 69 74 K
10 10 A A H < S+ 0 0 20 69 34 A
11 11 A A H < S+ 0 0 63 69 38 S
12 12 A K >< + 0 0 69 72 41 T
13 13 A Y T 3 + 0 0 120 72 5 Y
14 14 A K T 3 S+ 0 0 202 72 28 Q
15 15 A Y S <> S+ 0 0 142 72 53 K
16 16 A A H > + 0 0 52 72 76 S
17 17 A M H > S+ 0 0 139 72 81 L
18 18 A L H > S+ 0 0 42 72 58 Y
19 19 A K H X S+ 0 0 38 72 28 K
20 20 A K H X S+ 0 0 86 72 33 C
21 21 A a H X S+ 0 0 5 72 0 C
22 22 A b H >X S+ 0 0 0 72 10 E
23 23 A Y H 3X S+ 0 0 64 72 63 Q
24 24 A D H 3< S+ 0 0 51 72 31 G
25 25 A G H << S+ 0 0 3 72 4 A
26 26 A A H < S+ 0 0 44 72 54 H
27 27 A Y < + 0 0 128 72 81 K
28 28 A R + 0 0 12 72 93 T
29 29 A N + 0 0 124 71 54 A
30 30 A D S S- 0 0 67 65 90 .
31 31 A D + 0 0 97 70 75 .
32 32 A E S S- 0 0 73 72 30 D
33 33 A T >> - 0 0 88 72 32 S
34 34 A c H 3> S+ 0 0 12 72 0 C
35 35 A E H 34 S+ 0 0 83 72 49 S
36 36 A E H X> S+ 0 0 96 72 49 V
37 37 A R H 3X S+ 0 0 105 72 0 R
38 38 A A H 3< S+ 0 0 8 72 32 A
39 39 A A H <4 S+ 0 0 71 72 59 S
40 40 A R H < S+ 0 0 118 72 29 R
41 41 A I < + 0 0 47 72 11 V
42 42 A K + 0 0 159 72 73 T
43 43 A I S S- 0 0 122 72 77 S
44 44 A G > - 0 0 19 72 41 k
45 45 A P H > S+ 0 0 107 72 50 v
46 46 A K H > S+ 0 0 106 72 77 K
47 47 A a H > S+ 0 0 0 72 0 C
48 48 A V H X S+ 0 0 54 72 39 G
49 49 A K H X S+ 0 0 119 72 56 R
50 50 A A H X S+ 0 0 0 72 22 V
51 51 A F H X S+ 0 0 13 72 0 F
52 52 A K H X S+ 0 0 76 72 76 K
53 53 A D H X S+ 0 0 12 72 59 E
54 54 A b H X S+ 0 0 8 72 0 C
55 55 A c H X S+ 0 0 2 72 0 C
56 56 A Y H X S+ 0 0 67 72 88 E
57 57 A I H X S+ 0 0 69 72 48 L
58 58 A A H X S+ 0 0 10 72 22 A
59 59 A N H X S+ 0 0 51 72 76 T
60 60 A Q H < S+ 0 0 110 72 53 E
61 61 A V H X S+ 0 0 75 69 39 V
62 62 A R H < S+ 0 0 84 62 4 R
63 63 A A T < S+ 0 0 85 61 72 A
64 64 A E T 4 0 0 138 60 49 N
65 65 A Q < 0 0 148 42 48
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 11 0 89 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 28 0 0 0.340 11 0.97
2 2 A 0 89 0 0 11 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 0 0 0.356 11 0.95
3 3 A 2 0 2 5 0 0 2 0 0 0 0 0 0 2 18 21 41 7 0 2 61 0 0 1.668 55 0.35
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 48 18 33 0 2 61 0 0 1.095 36 0.50
5 5 A 0 0 3 0 0 0 0 0 3 0 0 0 0 2 5 78 2 8 0 0 63 0 0 0.892 29 0.62
6 6 A 5 3 84 0 0 0 0 0 0 0 0 0 0 0 6 2 0 0 0 0 63 0 0 0.641 21 0.70
7 7 A 0 4 1 1 0 0 0 4 1 0 0 0 0 0 1 1 15 48 12 9 67 0 0 1.699 56 0.41
8 8 A 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 12 3 70 6 4 69 0 0 1.112 37 0.59
9 9 A 0 1 17 0 0 0 0 0 4 0 0 0 0 1 3 17 23 28 3 1 69 0 0 1.828 61 0.26
10 10 A 12 3 1 0 0 0 0 0 80 0 1 3 0 0 0 0 0 0 0 0 69 0 0 0.759 25 0.65
11 11 A 0 0 0 0 0 0 0 4 70 0 22 1 0 0 0 0 0 0 1 1 69 0 0 0.905 30 0.62
12 12 A 0 0 0 0 0 0 0 0 0 0 1 14 0 0 1 74 7 0 1 1 72 0 0 0.923 30 0.58
13 13 A 0 0 0 0 7 0 90 0 0 0 0 0 0 3 0 0 0 0 0 0 72 0 0 0.377 12 0.95
14 14 A 0 3 0 0 0 0 0 0 1 0 0 0 0 1 8 82 4 0 0 0 72 0 0 0.721 24 0.72
15 15 A 0 1 0 0 0 0 8 0 0 0 3 1 0 64 0 3 1 0 10 8 72 0 0 1.304 43 0.47
16 16 A 3 7 1 3 0 0 0 0 22 28 19 1 0 0 3 4 6 3 0 0 72 0 0 2.004 66 0.24
17 17 A 36 8 7 13 0 6 0 0 4 0 0 1 0 1 3 4 3 10 3 1 72 0 0 2.149 71 0.18
18 18 A 32 24 21 4 0 0 4 0 4 10 0 0 0 0 0 0 0 1 0 0 72 0 0 1.715 57 0.42
19 19 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 26 68 6 0 0 0 72 0 0 0.774 25 0.72
20 20 A 0 0 3 0 0 0 0 0 0 0 1 0 3 0 8 81 1 0 3 0 72 0 0 0.799 26 0.67
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 0 0 0 0 0 0 0 97 0 0 0 0 3 0 0 72 0 0 0.127 4 0.89
23 23 A 0 6 0 11 1 0 71 0 0 0 0 0 0 0 0 0 3 8 0 0 72 0 0 1.015 33 0.36
24 24 A 0 0 0 0 0 0 0 3 10 0 1 0 0 6 0 0 0 0 0 81 72 0 0 0.720 24 0.69
25 25 A 0 0 0 0 0 0 0 97 3 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.127 4 0.96
26 26 A 15 1 1 10 0 0 0 0 69 0 0 0 0 3 0 0 0 0 0 0 72 0 0 0.985 32 0.45
27 27 A 0 0 0 0 6 0 14 0 0 0 3 6 7 11 35 17 0 0 3 0 72 0 0 1.890 63 0.19
28 28 A 14 8 4 0 0 0 8 1 8 3 0 3 0 1 29 6 0 11 0 3 72 1 0 2.209 73 0.06
29 29 A 1 0 0 0 0 0 13 0 3 0 7 3 0 0 0 0 0 0 72 1 71 7 17 1.007 33 0.46
30 30 A 12 3 9 8 5 0 11 2 0 0 0 2 0 5 0 2 0 5 11 28 65 0 0 2.236 74 0.09
31 31 A 0 4 1 0 0 0 11 4 0 0 9 1 0 16 0 0 1 4 0 47 70 0 0 1.691 56 0.24
32 32 A 0 1 0 0 1 0 3 0 0 0 0 0 0 3 0 1 1 86 0 3 72 0 0 0.665 22 0.70
33 33 A 0 0 0 0 0 0 0 0 0 0 19 78 0 0 0 0 0 0 1 1 72 0 0 0.633 21 0.68
34 34 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
35 35 A 8 0 0 0 0 0 0 0 3 0 8 0 0 0 3 0 4 64 0 10 72 0 0 1.258 42 0.50
36 36 A 4 0 0 0 0 0 0 0 0 0 0 0 0 0 7 7 58 17 0 7 72 0 0 1.301 43 0.50
37 37 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 72 0 0 0.000 0 1.00
38 38 A 8 7 0 0 0 0 0 0 81 0 0 4 0 0 0 0 0 0 0 0 72 0 0 0.699 23 0.67
39 39 A 1 0 0 0 0 1 0 3 69 0 4 0 0 0 8 3 6 4 0 0 72 0 0 1.204 40 0.41
40 40 A 0 0 0 0 0 0 7 0 0 0 0 0 0 3 89 1 0 0 0 0 72 0 0 0.449 14 0.71
41 41 A 28 0 72 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.591 19 0.88
42 42 A 0 4 0 0 0 0 0 0 1 0 14 32 0 0 8 29 8 0 3 0 72 0 0 1.704 56 0.26
43 43 A 13 15 39 0 0 0 0 0 4 0 11 0 0 1 3 3 1 3 0 7 72 0 0 1.893 63 0.22
44 44 A 0 0 3 0 0 0 0 81 0 0 1 3 0 4 1 3 0 0 4 0 72 0 3 0.856 28 0.59
45 45 A 3 1 0 0 0 0 0 0 4 71 4 0 0 0 0 3 6 8 0 0 72 0 0 1.135 37 0.50
46 46 A 0 3 13 0 6 1 0 0 3 1 0 0 0 4 40 18 1 7 3 0 72 0 0 1.890 63 0.23
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
48 48 A 44 0 42 0 1 0 0 3 4 0 1 0 0 0 1 3 0 0 0 0 72 0 0 1.235 41 0.60
49 49 A 0 0 0 0 0 0 0 0 6 0 8 1 0 0 19 51 7 6 0 1 72 0 0 1.493 49 0.44
50 50 A 6 0 7 0 0 0 0 0 88 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.463 15 0.78
51 51 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
52 52 A 0 10 1 3 0 0 0 0 0 0 3 28 0 0 8 32 0 0 15 0 72 0 0 1.700 56 0.23
53 53 A 0 8 0 0 0 0 1 0 3 0 8 1 0 1 1 0 3 43 4 25 72 0 0 1.693 56 0.41
54 54 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
55 55 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
56 56 A 17 4 13 0 0 0 6 0 8 0 1 11 0 1 4 3 1 19 10 1 72 0 0 2.317 77 0.11
57 57 A 15 17 36 7 15 0 7 0 3 0 0 0 0 0 0 0 0 0 0 0 72 0 0 1.711 57 0.51
58 58 A 1 0 6 1 0 0 0 0 90 0 1 0 0 0 0 0 0 0 0 0 72 0 0 0.431 14 0.77
59 59 A 0 0 1 0 3 0 0 0 4 0 26 8 3 11 1 7 0 6 28 1 72 0 0 2.014 67 0.24
60 60 A 0 3 0 0 0 0 0 0 0 0 0 4 0 0 6 24 56 8 0 0 72 0 0 1.267 42 0.46
61 61 A 13 39 26 3 13 0 1 0 0 0 0 0 0 4 0 0 0 0 0 0 69 0 0 1.549 51 0.61
62 62 A 0 0 0 0 0 0 0 0 0 0 0 2 0 0 98 0 0 0 0 0 62 0 0 0.083 2 0.95
63 63 A 0 7 2 2 0 0 0 0 44 0 7 3 0 0 2 3 3 11 0 16 61 0 0 1.801 60 0.28
64 64 A 0 0 0 0 0 0 0 0 2 0 2 0 0 0 0 15 5 47 22 8 60 0 0 1.465 48 0.51
65 65 A 0 0 0 0 0 0 0 0 0 0 0 0 0 7 2 7 5 55 17 7 42 0 0 1.428 47 0.51
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
53 19 712 1 yPv
54 19 533 1 yPv
55 29 712 1 yPi
56 26 571 1 yPv
57 29 487 1 yPv
58 29 709 1 yPv
59 23 393 1 nPm
60 29 698 1 nPm
61 29 698 1 nPm
62 29 680 1 yPv
63 29 709 1 sPl
64 29 710 1 sPl
65 29 707 1 nPm
66 29 54 1 yPt
66 44 70 3 rKFLp
67 29 71 1 nPm
68 26 702 1 yPv
69 19 682 1 sPv
70 42 350 2 kLGv
71 42 350 2 kLGv
//