Complet list of 1c01 hssp file
Complete list of 1c01.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1C01
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-02
HEADER ANTIMICROBIAL PROTEIN 13-JUL-99 1C01
COMPND MOL_ID: 1; MOLECULE: ANTIMICROBIAL PEPTIDE 1; CHAIN: A
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MACADAMIA INTEGRIFOLIA; ORGANISM_TAXID
AUTHOR A.M.MCMANUS,K.J.NIELSEN,J.P.MARCUS,S.J.HARRISON,J.L.GREEN, J.M.MANNERS
DBREF 1C01 A 1 76 UNP P80915 AMP1_MACIN 27 102
SEQLENGTH 76
NCHAIN 1 chain(s) in 1C01 data set
NALIGN 37
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : AMP1_MACIN 1C01 1.00 1.00 1 76 27 102 76 0 0 102 P80915 Antimicrobial peptide 1 OS=Macadamia integrifolia PE=1 SV=1
2 : W1PA47_AMBTC 0.80 0.95 1 76 23 98 76 0 0 98 W1PA47 Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00140p00093980 PE=4 SV=1
3 : W1PCM8_AMBTC 0.80 0.91 1 76 29 104 76 0 0 104 W1PCM8 Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00140p00096690 PE=4 SV=1
4 : A9NK78_PICSI 0.66 0.78 3 76 29 105 77 2 3 105 A9NK78 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
5 : A9NLS4_PICSI 0.66 0.78 3 76 29 105 77 2 3 105 A9NLS4 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
6 : Q71QD7_PINSY 0.66 0.77 3 76 29 105 77 2 3 105 Q71QD7 Antimicrobial peptide 2 OS=Pinus sylvestris GN=AMP4 PE=4 SV=1
7 : D9IWD8_PINPS 0.65 0.77 3 76 29 105 77 2 3 105 D9IWD8 Antimicrobial peptide 1 OS=Pinus pinaster GN=AMP1 PE=4 SV=1
8 : Q71QD8_PINSY 0.65 0.77 3 76 29 105 77 2 3 105 Q71QD8 Antimicrobial peptide 3 OS=Pinus sylvestris GN=AMP3 PE=4 SV=1
9 : AMP1_PINMO 0.64 0.74 3 76 29 105 77 2 3 105 P83880 Antimicrobial peptide 1 OS=Pinus monticola PE=1 SV=2
10 : D8SF19_SELML 0.64 0.75 3 76 9 84 76 1 2 84 D8SF19 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_115640 PE=4 SV=1
11 : Q71QE0_PINSY 0.64 0.77 3 76 29 105 77 2 3 105 Q71QE0 Antimicrobial peptide 1 OS=Pinus sylvestris GN=AMP1 PE=4 SV=1
12 : D8SEX7_SELML 0.63 0.76 3 76 26 101 76 1 2 101 D8SEX7 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_421332 PE=4 SV=1
13 : D8SEX8_SELML 0.63 0.76 3 76 9 84 76 1 2 84 D8SEX8 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_115352 PE=4 SV=1
14 : D8SEX2_SELML 0.62 0.74 3 76 9 84 76 1 2 84 D8SEX2 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_115594 PE=4 SV=1
15 : D8SEX4_SELML 0.59 0.75 3 76 22 97 76 1 2 97 D8SEX4 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_115572 PE=4 SV=1
16 : D8SEX5_SELML 0.59 0.75 3 76 26 101 76 1 2 101 D8SEX5 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_421330 PE=4 SV=1
17 : J9Q6B0_PINMO 0.56 0.73 3 76 29 105 77 2 3 105 J9Q6B0 Anti-microbial protein OS=Pinus monticola GN=AMP1 PE=4 SV=1
18 : J9Q7N8_PINMO 0.56 0.71 3 76 29 105 77 2 3 105 J9Q7N8 Anti-microbial protein OS=Pinus monticola GN=AMP1 PE=4 SV=1
19 : J9Q6X1_PINMO 0.55 0.71 3 76 29 105 77 2 3 105 J9Q6X1 Anti-microbial protein OS=Pinus monticola GN=AMP1 PE=4 SV=1
20 : J9Q7C0_PINMO 0.55 0.70 3 76 29 105 77 2 3 105 J9Q7C0 Anti-microbial protein OS=Pinus monticola GN=AMP1 PE=4 SV=1
21 : J9Q7X1_PINMO 0.55 0.71 3 76 29 105 77 2 3 105 J9Q7X1 Anti-microbial protein OS=Pinus monticola GN=AMP1 PE=4 SV=1
22 : B8LM35_PICSI 0.53 0.74 3 76 29 105 77 2 3 105 B8LM35 Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1
23 : D8SHV4_SELML 0.51 0.64 3 76 7 79 76 3 5 94 D8SHV4 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_117165 PE=4 SV=1
24 : D9IWD9_PINPS 0.51 0.70 3 76 30 105 76 1 2 105 D9IWD9 Antimicrobial peptide 2 OS=Pinus pinaster GN=AMP2 PE=4 SV=1
25 : D8SEX3_SELML 0.50 0.63 3 76 26 98 76 2 5 113 D8SEX3 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_421328 PE=4 SV=1
26 : K3YCT3_SETIT 0.43 0.67 1 76 30 104 76 1 1 104 K3YCT3 Uncharacterized protein OS=Setaria italica GN=Si012033m.g PE=4 SV=1
27 : I1J0X4_BRADI 0.42 0.64 3 76 25 100 77 2 4 100 I1J0X4 Uncharacterized protein OS=Brachypodium distachyon GN=BRADI5G19280 PE=4 SV=1
28 : W5ARA3_WHEAT 0.42 0.65 3 76 25 97 74 1 1 97 W5ARA3 Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
29 : W5B842_WHEAT 0.42 0.65 3 76 16 88 74 1 1 88 W5B842 Uncharacterized protein (Fragment) OS=Triticum aestivum PE=4 SV=1
30 : W5BA18_WHEAT 0.42 0.65 3 76 25 97 74 1 1 97 W5BA18 Uncharacterized protein OS=Triticum aestivum PE=4 SV=1
31 : C5YEJ2_SORBI 0.41 0.66 1 76 38 112 76 1 1 112 C5YEJ2 Putative uncharacterized protein Sb06g026400 OS=Sorghum bicolor GN=Sb06g026400 PE=4 SV=1
32 : D8QT03_SELML 0.40 0.57 3 76 22 103 82 4 8 103 D8QT03 Putative uncharacterized protein (Fragment) OS=Selaginella moellendorffii GN=SELMODRAFT_8589 PE=4 SV=1
33 : L0P1Z4_9POAL 0.40 0.62 3 76 27 102 77 2 4 102 L0P1Z4 PH01B001I13.6 protein OS=Phyllostachys edulis GN=PH01B001I13.6 PE=4 SV=1
34 : C5YEJ4_SORBI 0.39 0.66 3 76 39 116 79 3 6 116 C5YEJ4 Putative uncharacterized protein Sb06g026420 OS=Sorghum bicolor GN=Sb06g026420 PE=4 SV=1
35 : D8R277_SELML 0.39 0.57 3 76 27 108 82 4 8 108 D8R277 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_82694 PE=4 SV=1
36 : D8TDT8_SELML 0.38 0.62 1 76 26 103 79 3 4 104 D8TDT8 Putative uncharacterized protein OS=Selaginella moellendorffii GN=SELMODRAFT_137553 PE=4 SV=1
37 : K3YCJ0_SETIT 0.38 0.62 3 76 44 120 78 3 5 120 K3YCJ0 Uncharacterized protein OS=Setaria italica GN=Si011938m.g PE=4 SV=1
## ALIGNMENTS 1 - 37
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A S 0 0 14 7 0 SSS S S S
2 2 A A E -A 35 0A 24 7 82 ASH H S T
3 3 A F E -AB 34 18A 3 38 8 FLFFFFFFFFFFFFFFFFLFFFFFFLLFFFLFLLFFL
4 4 A T E +AB 33 17A 4 38 61 TTTTTTTTSDTDDDDDSSSSSTDTDTTSSSTDTTDVT
5 5 A V E -AB 32 16A 0 38 65 VVVAAAAAAAATAATTAAAAAAAAASSSSSTVSSVTS
6 6 A W - 0 0 43 38 4 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWYWWYFW
7 7 A S S S+ 0 0 50 38 70 SAAAAAAAAAAAAAAAVVVVAEAEAADDDDSFGGLQG
8 8 A G S S- 0 0 27 38 10 GGGGGGGGGGGGGGGGGGGGGAGSGGGGGGGGGGGSG
9 9 A P S S- 0 0 110 38 11 PPPPPPPPPPPPPPPPPPPPPAPAPPPPPPAPPPPPP
10 10 A G S S- 0 0 6 38 24 GGGGGGGGGGGGGGGGGGGGGGGVGGAAAADGGGGDG
11 11 A a S S+ 0 0 34 38 4 CCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCC
12 12 A N S S+ 0 0 118 38 55 NNNNNNNNNNNNNNNNNNNNNNNNNSTTTTSHTTHTT
13 13 A N S S+ 0 0 59 38 42 NNNNNNNNNNNNNNNNNNNNNNNNNGTGGGGNTSNNP
14 14 A R - 0 0 150 38 70 RRRHHHHHHRHRRVQQHHHHHQREWQNRRRDDSSDRG
15 15 A A + 0 0 67 38 86 AAAAAAAANLALLLRRNNNNNSLTLTSMMMTMKgMVe
16 16 A E E -B 5 0A 63 38 73 EEEAAAAAAEAEEEVVAAAAAVEVEAGSSSSQGgQLg
17 17 A R E -B 4 0A 145 37 54 RRRRRRRRRRRRRRRRRRRRRQRRRIRSSSTHHHH.H
18 18 A Y E +B 3 0A 37 38 65 YYVYYYYYYYYYYYYYYYYYYYYYYAMAAAIYMIYVM
19 19 A S + 0 0 62 38 57 SSSSSSSSSRSSSSSSNNNNNSRNRGSGGGGSSASTA
20 20 A K S S- 0 0 189 38 75 KKKKKKKKKAKAAAAAKKKKKKAEASsTSSAVssVRs
21 21 A b S S+ 0 0 71 38 0 CCCCCCCCCCCCCCCCCCCCCCCCCCcCCCCCccCCc
22 22 A G E S-D 74 0B 25 38 9 GGGGGGGGGGGGGGGGGGGGGGGWGGGGGGGGGGGGG
23 23 A c E -D 73 0B 39 38 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
24 24 A S E -D 72 0B 32 38 62 SSSSSSSSSNSTTTTTSSSFSSTSTSSSSSTLNNLNN
25 25 A A E -D 71 0B 44 38 51 AGANNNNNNNNNNNNNNNNNNNNNNNPPPPDNHHNNH
26 26 A I + 0 0 0 38 20 IIIIIIIIIVIVVVVVIIIIIIVIVLVVVVLIIIILV
27 27 A H + 0 0 130 38 82 HHKggggggggggrggssssgdgngQRHHHVhRRhdR
28 28 A Q - 0 0 18 38 89 QLQvvvvvvqvqqqqqvvvvvfqfqFFFFFFyFFyvF
29 29 A K + 0 0 125 38 38 KKKHHHHHHHHHHHHHHHHHHHHRHYHHHHYHHHHGH
30 30 A G S S- 0 0 0 38 22 GGGGGGGGGGAGGGGGGGGGEGGGGDGGGGAGGGGYG
31 31 A G - 0 0 0 38 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
32 32 A Y E +AC 5 63A 11 38 51 YYYYYYYYYYYYYYYYYYYYYYYYYQHHHHQFHHFFH
33 33 A D E -A 4 0A 28 38 43 DEQEEEEEESESSSSSEEEEEESESEEEEEEKEEKEE
34 34 A F E -A 3 0A 0 38 19 FFFFFFFFFFFFFFFFFFFFFFVFVKFFFFFFFFFWF
35 35 A S E -A 2 0A 53 38 82 SVVVVMVMVAVGAVGGVVVVVVVVASNNNNYVNNVHN
36 36 A Y + 0 0 82 38 19 YYYYYYYYYYYYYYYYYYYYYFYNYYYFFFYYFFYKF
37 37 A T S S- 0 0 87 38 64 TNTQQQQQQQQQQQQQQQQQQELQLQRRRRRERREQR
38 38 A G S S+ 0 0 44 38 9 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRG
39 39 A Q - 0 0 62 38 29 QQQQQQQQQQQQQQQQQQQQQQHQHQEEEEQQEEQEE
40 40 A T - 0 0 24 38 52 TTTTTTTTTTTTTTTTAAAAASAIATTTTTTPKTRSK
41 41 A A E -EF 57 74B 0 38 33 AAAAAAAAAAAAAAAAPPPPPAAAAAAAAAAIAAITA
42 42 A A E -EF 56 73B 0 38 68 AAASSASSAASAAAAATMMMTAAAARTTTTTRTTRAT
43 43 A L E - F 0 72B 0 38 71 LLLAAAAAAAAAAAAAAAAAAAAAALLLLLLTLLTnL
44 44 A Y E -EF 53 71B 40 38 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYFyY
45 45 A N S S+ 0 0 92 38 45 NNNNNNNNNNNNNNNNNNNNNNNNNTSSSSTNTTNNP
46 46 A Q S >> S- 0 0 52 38 66 QQQTTTTTTTTTTTTTTTTTTTTTTEEEEEGQKEQQK
47 47 A A G >4 S+ 0 0 44 38 72 APGAADADDAAAAAAANNNNNEAEATHHHHTPPPPPP
48 48 A G G 34 S- 0 0 33 38 67 GDNNNNNNNNNNNNNNNNNNNINLNGGGGGGFGGFDG
49 49 A c G <4 S+ 0 0 35 38 1 CCCCCCCCCCCCCCCCCCCCYCCCCCCCCCCCCCCCC
50 50 A S << + 0 0 98 38 74 SKQNNKKKKRKQQRQQKKKKKNQNQAAAAAAQAAQKA
51 51 A G S S- 0 0 39 38 7 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGDGGDGG
52 52 A V - 0 0 116 38 66 VVVVVVVVVVVVVVVVVVVVVPVPVTTTTTTETTEST
53 53 A A E +E 44 0B 34 38 49 AAAAAAAAAAAAAAAAAAAAAPAPASPPPPPVPPVPP
54 54 A H E + 0 0B 100 38 79 HHHHHQQQQHQHHHQQQQQQQHQHQYYYYYYSYYSHY
55 55 A T E - 0 0B 48 38 61 TTTTTTTTTTTTTTTTTTTTTTRTRLQQQQQTQQTTE
56 56 A R E -E 42 0B 133 38 76 RRRRRRRRRRRRRRRRRRRRRRWRWVVVVVVTVVISV
57 57 A F E +E 41 0B 51 38 8 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFIFFILF
58 58 A G S S+ 0 0 40 37 59 GGGSSSSSSSSSSSSSSSSSSA.SREEEEEEsEEsDE
59 59 A S S S- 0 0 86 32 60 SSSGGSGSSSGGGRAASSSSSG.GR.DDDD.a..aS.
60 60 A S - 0 0 80 38 69 SGGSSSSSSSSSSSSSNNNNNRRSHDTTTTDTDDTSD
61 61 A A - 0 0 27 38 74 AAAVVVVVVVVVVVVVVVVVVGRVCTQQQQTTTTTVT
62 62 A R + 0 0 213 38 78 RRSnnnnnnQnQQQQQnnnnnvHQSQAAAAQmQQmSR
63 63 A A B -C 32 0A 40 32 46 ASSaaaaaaDaDDDDDaaaaad.D.A....AsAAsAA
64 64 A a + 0 0 48 37 0 CCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCC
65 65 A N S S- 0 0 107 37 49 NNSSSSSSSSSSSSSSSSSSNSSS.GGGGGGnGGnGG
66 66 A P - 0 0 106 38 63 PAAGGSGSNGGGGGGGNNNNNGGGGDDDDDDvDDvPD
67 67 A F + 0 0 45 38 4 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFIF
68 68 A G + 0 0 41 38 34 GGGGGGGGGGGGGGGGAAAAAGRGRGGGGGGQGGQGG
69 69 A W - 0 0 57 38 1 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWFWWFWW
70 70 A K S S+ 0 0 59 38 54 KKRKKKKKKRKNNNNNKKKKKKNKNRRRRRRQHRQKH
71 71 A S E -DF 25 44B 0 38 0 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
72 72 A I E -DF 24 43B 1 38 34 IMIFFFFFVIFFFFFFVVVVVFIFIIIIIIIIIIIII
73 73 A F E -DF 23 42B 57 38 65 FFFFFFFFFFFFFFFFFFFFFFFFFSHHHHNFHHFEH
74 74 A I E -DF 22 41B 3 38 7 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIFIIFII
75 75 A Q 0 0 75 38 34 QQQQQQQQQQQQQQQQQQQQQQQQQDDDDDHQDDQSD
76 76 A b 0 0 137 38 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 7 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 29 0 29 14 0 29 0 0 0 0 0 0 7 0 0 1.352 45 0.18
3 3 A 0 21 0 0 79 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.515 17 0.92
4 4 A 3 0 0 0 0 0 0 0 0 0 24 47 0 0 0 0 0 0 0 26 38 0 0 1.142 38 0.39
5 5 A 16 0 0 0 0 0 0 0 50 0 21 13 0 0 0 0 0 0 0 0 38 0 0 1.233 41 0.35
6 6 A 0 0 0 0 3 92 5 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.326 10 0.95
7 7 A 11 3 0 0 3 0 0 8 50 0 8 0 0 0 0 0 3 5 0 11 38 0 0 1.664 55 0.29
8 8 A 0 0 0 0 0 0 0 92 3 0 5 0 0 0 0 0 0 0 0 0 38 0 0 0.326 10 0.90
9 9 A 0 0 0 0 0 0 0 0 8 92 0 0 0 0 0 0 0 0 0 0 38 0 0 0.276 9 0.89
10 10 A 3 0 0 0 0 0 0 82 11 0 0 0 0 0 0 0 0 0 0 5 38 0 0 0.654 21 0.75
11 11 A 0 0 0 0 0 0 0 3 0 0 0 0 97 0 0 0 0 0 0 0 38 0 0 0.122 4 0.95
12 12 A 0 0 0 0 0 0 0 0 0 0 5 21 0 5 0 0 0 0 68 0 38 0 0 0.898 29 0.44
13 13 A 0 0 0 0 0 0 0 13 0 3 3 5 0 0 0 0 0 0 76 0 38 0 0 0.820 27 0.57
14 14 A 3 0 0 0 0 3 0 3 0 0 5 0 0 32 32 0 11 3 3 8 38 0 0 1.799 60 0.29
15 15 A 3 16 0 13 0 0 0 3 26 0 5 8 0 0 5 3 0 3 16 0 38 0 2 2.094 69 0.14
16 16 A 11 3 0 0 0 0 0 11 34 0 11 0 0 0 0 0 5 26 0 0 38 1 0 1.680 56 0.27
17 17 A 0 0 3 0 0 0 0 0 0 0 8 3 0 14 70 0 3 0 0 0 37 0 0 1.015 33 0.45
18 18 A 5 0 5 8 0 0 71 0 11 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.990 33 0.34
19 19 A 0 0 0 0 0 0 0 13 5 0 55 3 0 0 8 0 0 0 16 0 38 0 0 1.337 44 0.43
20 20 A 5 0 0 0 0 0 0 0 24 0 18 3 0 0 3 45 0 3 0 0 38 0 4 1.455 48 0.24
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
22 22 A 0 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.122 4 0.91
23 23 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
24 24 A 0 5 0 0 3 0 0 0 0 0 58 21 0 0 0 0 0 0 13 0 38 0 0 1.162 38 0.38
25 25 A 0 0 0 0 0 0 0 3 8 11 0 0 0 8 0 0 0 0 68 3 38 0 0 1.089 36 0.49
26 26 A 34 8 58 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.884 29 0.79
27 27 A 3 0 0 0 0 0 0 39 0 0 11 0 0 21 13 3 3 0 3 5 38 0 25 1.737 57 0.18
28 28 A 34 3 0 0 29 0 5 0 0 0 0 0 0 0 0 0 29 0 0 0 38 0 0 1.335 44 0.11
29 29 A 0 0 0 0 0 0 5 3 0 0 0 0 0 79 3 11 0 0 0 0 38 0 0 0.770 25 0.62
30 30 A 0 0 0 0 0 0 3 87 5 0 0 0 0 0 0 0 0 3 0 3 38 0 0 0.565 18 0.78
31 31 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
32 32 A 0 0 0 0 8 0 68 0 0 0 0 0 0 18 0 0 5 0 0 0 38 0 0 0.927 30 0.49
33 33 A 0 0 0 0 0 0 0 0 0 0 21 0 0 0 0 5 3 66 0 5 38 0 0 1.009 33 0.56
34 34 A 5 0 0 0 89 3 0 0 0 0 0 0 0 0 0 3 0 0 0 0 38 0 0 0.446 14 0.81
35 35 A 47 0 0 5 0 0 3 8 8 0 8 0 0 3 0 0 0 0 18 0 38 0 0 1.613 53 0.17
36 36 A 0 0 0 0 18 0 76 0 0 0 0 0 0 0 0 3 0 0 3 0 38 0 0 0.709 23 0.81
37 37 A 0 5 0 0 0 0 0 0 0 0 0 8 0 0 21 0 55 8 3 0 38 0 0 1.307 43 0.35
38 38 A 0 0 0 0 0 0 0 97 0 0 0 0 0 0 3 0 0 0 0 0 38 0 0 0.122 4 0.91
39 39 A 0 0 0 0 0 0 0 0 0 0 0 0 0 5 0 0 74 21 0 0 38 0 0 0.708 23 0.71
40 40 A 0 0 3 0 0 0 0 0 18 3 5 63 0 0 3 5 0 0 0 0 38 0 0 1.199 40 0.47
41 41 A 0 0 5 0 0 0 0 0 79 13 0 3 0 0 0 0 0 0 0 0 38 0 0 0.704 23 0.67
42 42 A 0 0 0 8 0 0 0 0 45 0 13 26 0 0 8 0 0 0 0 0 38 0 0 1.379 46 0.31
43 43 A 0 34 0 0 0 0 0 0 58 0 0 5 0 0 0 0 0 0 3 0 38 0 1 0.934 31 0.28
44 44 A 0 0 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.122 4 1.00
45 45 A 0 0 0 0 0 0 0 0 0 3 11 11 0 0 0 0 0 0 76 0 38 0 0 0.776 25 0.54
46 46 A 0 0 0 0 0 0 0 3 0 0 0 58 0 0 0 5 18 16 0 0 38 0 0 1.170 39 0.33
47 47 A 0 0 0 0 0 0 0 3 37 18 0 5 0 11 0 0 0 5 13 8 38 0 0 1.789 59 0.27
48 48 A 0 3 3 0 5 0 0 29 0 0 0 0 0 0 0 0 0 0 55 5 38 0 0 1.188 39 0.33
49 49 A 0 0 0 0 0 0 3 0 0 0 0 0 97 0 0 0 0 0 0 0 38 0 0 0.122 4 0.98
50 50 A 0 0 0 0 0 0 0 0 24 0 5 0 0 0 5 32 24 0 11 0 38 0 0 1.593 53 0.25
51 51 A 0 0 0 0 0 0 0 95 0 0 0 0 0 0 0 0 0 0 0 5 38 0 0 0.206 6 0.92
52 52 A 63 0 0 0 0 0 0 0 0 5 3 24 0 0 0 0 0 5 0 0 38 0 0 1.037 34 0.34
53 53 A 5 0 0 0 0 0 0 0 63 29 3 0 0 0 0 0 0 0 0 0 38 0 0 0.900 30 0.51
54 54 A 0 0 0 0 0 0 24 0 0 0 5 0 0 34 0 0 37 0 0 0 38 0 0 1.231 41 0.21
55 55 A 0 3 0 0 0 0 0 0 0 0 0 71 0 0 5 0 18 3 0 0 38 0 0 0.901 30 0.39
56 56 A 24 0 3 0 0 5 0 0 0 0 3 3 0 0 63 0 0 0 0 0 38 0 0 1.074 35 0.24
57 57 A 0 3 5 0 92 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 1 0 0.326 10 0.91
58 58 A 0 0 0 0 0 0 0 11 3 0 57 0 0 0 3 0 0 24 0 3 37 5 2 1.199 40 0.40
59 59 A 0 0 0 0 0 0 0 25 13 0 44 0 0 0 6 0 0 0 0 13 32 0 0 1.401 46 0.40
60 60 A 0 0 0 0 0 0 0 5 0 0 45 16 0 3 5 0 0 0 13 13 38 0 0 1.591 53 0.30
61 61 A 53 0 0 0 0 0 0 3 11 0 0 18 3 0 3 0 11 0 0 0 38 0 0 1.411 47 0.25
62 62 A 3 0 0 5 0 0 0 0 11 0 8 0 0 3 11 0 29 0 32 0 38 6 15 1.744 58 0.21
63 63 A 0 0 0 0 0 0 0 0 63 0 13 0 0 0 0 0 0 0 0 25 32 0 0 0.900 30 0.53
64 64 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 37 0 0 0.000 0 1.00
65 65 A 0 0 0 0 0 0 0 27 0 0 57 0 0 0 0 0 0 0 16 0 37 0 2 0.970 32 0.50
66 66 A 5 0 0 0 0 0 0 37 5 8 5 0 0 0 0 0 0 0 16 24 38 0 0 1.666 55 0.36
67 67 A 0 0 3 0 97 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.122 4 0.96
68 68 A 0 0 0 0 0 0 0 76 13 0 0 0 0 0 5 0 5 0 0 0 38 0 0 0.783 26 0.65
69 69 A 0 0 0 0 5 95 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.206 6 0.98
70 70 A 0 0 0 0 0 0 0 0 0 0 0 0 0 5 24 47 5 0 18 0 38 0 0 1.317 43 0.46
71 71 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
72 72 A 16 0 47 3 34 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 1.108 36 0.65
73 73 A 0 0 0 0 74 0 0 0 0 0 3 0 0 18 0 0 0 3 3 0 38 0 0 0.824 27 0.34
74 74 A 0 0 95 0 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 38 0 0 0.206 6 0.92
75 75 A 0 0 0 0 0 0 0 0 0 0 3 0 0 3 0 0 74 0 0 21 38 0 0 0.745 24 0.65
76 76 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 38 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 26 54 2 gGNv
4 61 91 1 nQa
5 26 54 2 gGNv
5 61 91 1 nQa
6 26 54 2 gNNv
6 61 91 1 nQa
7 26 54 2 gNDv
7 61 91 1 nQa
8 26 54 2 gNNv
8 61 91 1 nQa
9 26 54 2 gHNv
9 61 91 1 nQa
10 26 34 2 gASq
11 26 54 2 gNNv
11 61 91 1 nQa
12 26 51 2 gASq
13 26 34 2 gASq
14 26 34 2 rASq
15 26 47 2 gASq
16 26 51 2 gASq
17 26 54 2 sHNv
17 61 91 1 nQa
18 26 54 2 sHNv
18 61 91 1 nQa
19 26 54 2 sHNv
19 61 91 1 nQa
20 26 54 2 sHNv
20 61 91 1 nQa
21 26 54 2 gHNv
21 61 91 1 nQa
22 26 54 2 dDKf
22 61 91 1 vQd
23 26 32 2 gASq
24 26 55 2 nDKf
25 26 51 2 gASq
27 19 43 3 sVGTc
32 26 47 2 hPSy
32 57 80 4 sTIRQa
32 61 88 1 mYs
32 64 92 1 nQv
33 19 45 3 sVGSc
34 14 52 2 gKKg
34 19 59 3 sAGSc
35 26 52 2 hPSy
35 57 85 4 sTIREa
35 61 93 1 mYs
35 64 97 1 nQv
36 27 52 2 dASv
36 43 70 1 nLy
37 14 57 1 eQg
37 19 63 3 sVGSc
//