Complet list of 1bwx hssp file
Complete list of 1bwx.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1BWX
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-04-27
HEADER PEPTIDE HORMONE 29-SEP-98 1BWX
COMPND MOL_ID: 1; MOLECULE: PARATHYROID HORMONE; CHAIN: A; FRAGMENT: RESIDUES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: HOMO SAPIENS; ORGANISM_COMMON: HUMAN;
AUTHOR U.C.MARX,P.ROESCH,K.ADERMANN,P.BAYER,W.-G.FORSSMANN
DBREF 1BWX A 1 39 UNP P01270 PTHY_HUMAN 32 70
SEQLENGTH 39
NCHAIN 1 chain(s) in 1BWX data set
NALIGN 74
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : G1S7I1_NOMLE 1.00 1.00 1 39 32 70 39 0 0 115 G1S7I1 Uncharacterized protein OS=Nomascus leucogenys GN=PTH PE=4 SV=1
2 : G3RXR5_GORGO 1.00 1.00 1 39 32 70 39 0 0 115 G3RXR5 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101143894 PE=4 SV=1
3 : H2NE20_PONAB 1.00 1.00 1 39 32 70 39 0 0 115 H2NE20 Uncharacterized protein OS=Pongo abelii GN=PTH PE=4 SV=1
4 : H2Q375_PANTR 1.00 1.00 1 39 32 70 39 0 0 115 H2Q375 Uncharacterized protein OS=Pan troglodytes GN=PTH PE=4 SV=1
5 : PTHY_HUMAN 1.00 1.00 1 39 32 70 39 0 0 115 P01270 Parathyroid hormone OS=Homo sapiens GN=PTH PE=1 SV=1
6 : F7F637_MACMU 0.97 1.00 1 39 32 70 39 0 0 115 F7F637 Uncharacterized protein OS=Macaca mulatta GN=PTH PE=4 SV=1
7 : G7NDW0_MACMU 0.97 1.00 1 39 32 70 39 0 0 115 G7NDW0 Parathyroid hormone OS=Macaca mulatta GN=EGK_06474 PE=4 SV=1
8 : G7PQP2_MACFA 0.97 1.00 1 39 32 70 39 0 0 115 G7PQP2 Parathyroid hormone OS=Macaca fascicularis GN=EGM_05839 PE=4 SV=1
9 : PTHY_MACFA 0.97 1.00 1 39 32 70 39 0 0 115 Q9XT35 Parathyroid hormone OS=Macaca fascicularis GN=PTH PE=3 SV=1
10 : D2HU58_AILME 0.95 1.00 1 39 32 70 39 0 0 115 D2HU58 Uncharacterized protein (Fragment) OS=Ailuropoda melanoleuca GN=LOC100483460 PE=4 SV=1
11 : D3YLI8_URSAM 0.95 1.00 1 39 32 70 39 0 0 115 D3YLI8 Parathyroid hormone (Precursor) OS=Ursus americanus GN=PTH PE=4 SV=1
12 : F6SNK6_CALJA 0.95 0.97 1 39 32 70 39 0 0 115 F6SNK6 Uncharacterized protein OS=Callithrix jacchus GN=PTH PE=4 SV=1
13 : G9BHY4_BOVIN 0.95 1.00 1 39 5 43 39 0 0 88 G9BHY4 Parathyroid hormone (Fragment) OS=Bos taurus GN=PTH PE=4 SV=1
14 : G9BHY5_SOUCH 0.95 1.00 1 39 5 43 39 0 0 88 G9BHY5 Parathyroid hormone (Fragment) OS=Sousa chinensis GN=PTH PE=4 SV=1
15 : G9BHY6_NEOPH 0.95 1.00 2 39 1 38 38 0 0 83 G9BHY6 Parathyroid hormone (Fragment) OS=Neophocaena phocaenoides GN=PTH PE=4 SV=1
16 : G9BHY8_GRAGR 0.95 1.00 1 39 1 39 39 0 0 84 G9BHY8 Parathyroid hormone (Fragment) OS=Grampus griseus GN=PTH PE=4 SV=1
17 : G9BHY9_BALOM 0.95 1.00 1 39 5 43 39 0 0 88 G9BHY9 Parathyroid hormone (Fragment) OS=Balaenoptera omurai GN=PTH PE=4 SV=1
18 : G9BHZ0_STEAT 0.95 1.00 1 39 5 43 39 0 0 88 G9BHZ0 Parathyroid hormone (Fragment) OS=Stenella attenuata GN=PTH PE=4 SV=1
19 : G9BHZ2_PLAGN 0.95 1.00 1 39 5 43 39 0 0 88 G9BHZ2 Parathyroid hormone (Fragment) OS=Platanista gangetica GN=PTH PE=4 SV=1
20 : J9JIM5_PIG 0.95 1.00 1 39 16 54 39 0 0 99 J9JIM5 Parathyroid hormone (Fragment) OS=Sus scrofa GN=PTH PE=4 SV=1
21 : M3YNZ7_MUSPF 0.95 1.00 1 39 32 70 39 0 0 115 M3YNZ7 Uncharacterized protein OS=Mustela putorius furo GN=PTH PE=4 SV=1
22 : PTHY_CANFA 0.95 1.00 1 39 32 70 39 0 0 115 P52212 Parathyroid hormone OS=Canis familiaris GN=PTH PE=3 SV=1
23 : PTHY_HORSE 0.95 1.00 1 39 32 70 39 0 0 115 Q27IM2 Parathyroid hormone OS=Equus caballus GN=PTH PE=3 SV=1
24 : PTHY_PIG 0.95 1.00 1 39 32 70 39 0 0 115 P01269 Parathyroid hormone OS=Sus scrofa GN=PTH PE=1 SV=1
25 : D1L1N7_EUBAS 0.94 1.00 5 39 1 35 35 0 0 80 D1L1N7 Parathyroid hormone (Fragment) OS=Eubalaena australis GN=PTH PE=4 SV=1
26 : D1L1N8_EUBAS 0.94 1.00 5 39 1 35 35 0 0 80 D1L1N8 Parathyroid hormone (Fragment) OS=Eubalaena australis GN=PTH PE=4 SV=1
27 : D1L1N9_EUBAS 0.94 1.00 5 39 1 35 35 0 0 80 D1L1N9 Parathyroid hormone (Fragment) OS=Eubalaena australis GN=PTH PE=4 SV=1
28 : D1L1P1_EUBAS 0.94 1.00 5 39 1 35 35 0 0 80 D1L1P1 Parathyroid hormone (Fragment) OS=Eubalaena australis GN=PTH PE=4 SV=1
29 : G3TZR3_LOXAF 0.92 0.97 1 39 32 70 39 0 0 115 G3TZR3 Uncharacterized protein OS=Loxodonta africana GN=PTH PE=4 SV=1
30 : PTHY_BOVIN 0.92 1.00 1 39 32 70 39 0 0 115 P01268 Parathyroid hormone OS=Bos taurus GN=PTH PE=1 SV=1
31 : D1L1G0_MEGNO 0.91 1.00 5 39 1 35 35 0 0 80 D1L1G0 Parathyroid hormone (Fragment) OS=Megaptera novaeangliae GN=PTH PE=4 SV=1
32 : D1L1J4_MEGNO 0.91 1.00 5 39 1 35 35 0 0 80 D1L1J4 Parathyroid hormone (Fragment) OS=Megaptera novaeangliae GN=PTH PE=4 SV=1
33 : D1L1R0_BALBN 0.91 1.00 5 39 1 35 35 0 0 80 D1L1R0 Parathyroid hormone (Fragment) OS=Balaenoptera bonaerensis GN=PTH PE=4 SV=1
34 : D1L1R5_BALBN 0.91 1.00 5 39 1 35 35 0 0 80 D1L1R5 Parathyroid hormone (Fragment) OS=Balaenoptera bonaerensis GN=PTH PE=4 SV=1
35 : PTHY_FELCA 0.90 1.00 1 39 32 70 39 0 0 115 Q9GL67 Parathyroid hormone OS=Felis catus GN=PTH PE=3 SV=1
36 : G3I058_CRIGR 0.87 0.97 1 38 31 68 38 0 0 114 G3I058 Parathyroid hormone OS=Cricetulus griseus GN=I79_016734 PE=4 SV=1
37 : H0WH33_OTOGA 0.87 1.00 1 39 32 70 39 0 0 115 H0WH33 Uncharacterized protein OS=Otolemur garnettii GN=PTH PE=4 SV=1
38 : G9BHZ1_SHEEP 0.85 0.92 1 39 5 43 39 0 0 88 G9BHZ1 Parathyroid hormone (Fragment) OS=Ovis aries GN=PTH PE=4 SV=1
39 : PTHY_RAT 0.84 0.97 1 38 32 69 38 0 0 115 P04089 Parathyroid hormone OS=Rattus norvegicus GN=Pth PE=2 SV=1
40 : Q80WZ2_RAT 0.84 0.97 1 38 22 59 38 0 0 105 Q80WZ2 Hypothalamic parathyroid hormone OS=Rattus norvegicus GN=Pth PE=4 SV=1
41 : L9L6Q5_TUPCH 0.83 0.97 1 36 32 67 36 0 0 112 L9L6Q5 Parathyroid hormone OS=Tupaia chinensis GN=TREES_T100011594 PE=4 SV=1
42 : Q9Z0L6_MOUSE 0.82 0.97 1 38 32 69 38 0 0 115 Q9Z0L6 Parathyroid hormone (Precursor) OS=Mus musculus GN=Pth PE=4 SV=1
43 : W5PC81_SHEEP 0.82 0.92 1 39 32 70 39 0 0 115 W5PC81 Uncharacterized protein OS=Ovis aries GN=PTH PE=4 SV=1
44 : G1NTV1_MYOLU 0.81 0.92 1 36 32 67 36 0 0 115 G1NTV1 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
45 : I3N6Y7_SPETR 0.77 0.90 1 39 32 70 39 0 0 115 I3N6Y7 Uncharacterized protein OS=Spermophilus tridecemlineatus GN=PTH PE=4 SV=1
46 : G1SNZ6_RABIT 0.76 0.95 1 37 32 68 37 0 0 115 G1SNZ6 Uncharacterized protein OS=Oryctolagus cuniculus GN=PTH PE=4 SV=1
47 : M7BM86_CHEMY 0.70 0.91 1 33 32 64 33 0 0 124 M7BM86 Parathyroid hormone OS=Chelonia mydas GN=UY3_05986 PE=4 SV=1
48 : A9YX65_CHICK 0.67 0.88 1 33 32 64 33 0 0 119 A9YX65 Parathyroid hormone OS=Gallus gallus PE=4 SV=1
49 : G5C7S9_HETGA 0.67 0.87 1 39 32 70 39 0 0 115 G5C7S9 Parathyroid hormone OS=Heterocephalus glaber GN=GW7_05480 PE=4 SV=1
50 : H1A031_TAEGU 0.67 0.88 1 33 32 64 33 0 0 115 H1A031 Uncharacterized protein OS=Taeniopygia guttata GN=PTH PE=4 SV=1
51 : PTHY_CHICK 0.67 0.88 1 33 32 64 33 0 0 119 P15743 Parathyroid hormone OS=Gallus gallus GN=PTH PE=3 SV=1
52 : U3IBM2_ANAPL 0.67 0.88 1 33 32 64 33 0 0 119 U3IBM2 Uncharacterized protein OS=Anas platyrhynchos GN=PTH PE=4 SV=1
53 : U3K7W4_FICAL 0.67 0.88 1 33 32 64 33 0 0 110 U3K7W4 Uncharacterized protein OS=Ficedula albicollis GN=PTH PE=4 SV=1
54 : H0V1X5_CAVPO 0.66 0.89 1 38 32 69 38 0 0 115 H0V1X5 Uncharacterized protein OS=Cavia porcellus GN=PTH PE=4 SV=1
55 : K7F011_PELSI 0.66 0.91 1 32 4 35 32 0 0 35 K7F011 Uncharacterized protein (Fragment) OS=Pelodiscus sinensis PE=4 SV=1
56 : G1N159_MELGA 0.64 0.88 1 33 32 64 33 0 0 119 G1N159 Uncharacterized protein OS=Meleagris gallopavo GN=PTH PE=4 SV=1
57 : K7FA62_PELSI 0.64 0.91 1 33 32 64 33 0 0 123 K7FA62 Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
58 : K7FAK1_PELSI 0.64 0.91 1 33 32 64 33 0 0 93 K7FAK1 Uncharacterized protein OS=Pelodiscus sinensis PE=4 SV=1
59 : F6PTD8_MONDO 0.62 0.81 2 33 33 64 32 0 0 120 F6PTD8 Uncharacterized protein OS=Monodelphis domestica GN=PTH PE=4 SV=1
60 : H9GQQ7_ANOCA 0.61 0.82 1 33 4 36 33 0 0 36 H9GQQ7 Uncharacterized protein (Fragment) OS=Anolis carolinensis GN=LOC100565647 PE=4 SV=1
61 : V8PFG6_OPHHA 0.61 0.82 1 33 40 72 33 0 0 120 V8PFG6 Parathyroid hormone (Fragment) OS=Ophiophagus hannah GN=PTH PE=4 SV=1
62 : C1L356_XENLA 0.58 0.82 1 33 3 35 33 0 0 89 C1L356 Parathyroid hormone (Fragment) OS=Xenopus laevis GN=pth PE=2 SV=1
63 : G1NTV2_MYOLU 0.55 0.84 1 31 33 63 31 0 0 111 G1NTV2 Uncharacterized protein OS=Myotis lucifugus PE=4 SV=1
64 : Q2PCS7_TAKRU 0.53 0.82 1 34 31 64 34 0 0 110 Q2PCS7 Parathyroid hormone (Precursor) OS=Takifugu rubripes GN=PTHYA PE=4 SV=1
65 : G3WZ58_SARHA 0.52 0.77 1 31 32 62 31 0 0 124 G3WZ58 Uncharacterized protein OS=Sarcophilus harrisii GN=PTH PE=4 SV=1
66 : Q2PA50_TETFL 0.52 0.77 1 31 30 60 31 0 0 62 Q2PA50 Parathyroid hormone (Fragment) OS=Tetraodon fluviatilis GN=PTHYB PE=2 SV=1
67 : Q6W9J4_TAKRU 0.52 0.77 1 31 30 60 31 0 0 91 Q6W9J4 Parathyroid hormone OS=Takifugu rubripes GN=PTH PE=4 SV=1
68 : C8ZLP2_TETNG 0.48 0.81 1 31 1 31 31 0 0 64 C8ZLP2 Parathyroid hormone (Fragment) OS=Tetraodon nigroviridis GN=pthb PE=4 SV=1
69 : F1QMK0_DANRE 0.48 0.76 1 33 36 68 33 0 0 102 F1QMK0 Uncharacterized protein OS=Danio rerio GN=pth1a PE=4 SV=1
70 : G3NCX9_GASAC 0.48 0.79 1 33 31 63 33 0 0 100 G3NCX9 Uncharacterized protein OS=Gasterosteus aculeatus PE=4 SV=1
71 : H2LSX9_ORYLA 0.48 0.74 1 31 30 60 31 0 0 87 H2LSX9 Uncharacterized protein OS=Oryzias latipes PE=4 SV=1
72 : H3C1I1_TETNG 0.48 0.77 1 31 30 60 31 0 0 93 H3C1I1 Uncharacterized protein OS=Tetraodon nigroviridis PE=4 SV=1
73 : Q5TLZ1_DANRE 0.48 0.76 1 33 36 68 33 0 0 102 Q5TLZ1 Parathyroid hormone OS=Danio rerio GN=pth1a PE=4 SV=1
74 : Q6WQ25_DANRE 0.48 0.76 1 33 36 68 33 0 0 102 Q6WQ25 Parathyroid hormone ligand type-1 OS=Danio rerio GN=pth1a PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A S 0 0 175 65 46 SSSSSSSSSSSSSS SSSSSSSSS SA SAASAASAASAASSSSSSSASSSS SSATTATTTAA
2 2 A V - 0 0 109 67 5 VVVVVVVVVVVVVVVVVVVVVVVV VV VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIIIVV
3 3 A S S S+ 0 0 78 67 17 SSSSSSSSSSSSSSSSSSSSSSSS SS SSSSSSSSSSSSSSSSSSSSSSSSSSSSGSTSSSNS
4 4 A E S > S+ 0 0 113 67 0 EEEEEEEEEEEEEEEEEEEEEEEE EE EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
5 5 A I H > S+ 0 0 86 75 32 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIMMIMMMMIMMMMIMVFIVVVVVVV
6 6 A Q H > S+ 0 0 115 75 2 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQEQQQQQQQ
7 7 A L H > S+ 0 0 21 75 12 LLLLLLLLLFFLFLLLLLLLFFLLLLLLFFFFFFFLFYLLLLYLFFLLLLLLLLLLLLLIILLLLLLLLL
8 8 A M H < S+ 0 0 104 75 0 MMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMMLMMMMMMM
9 9 A H H < S+ 0 0 104 75 3 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHHH
10 10 A N H >< S+ 0 0 19 75 18 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNNNNNNDNDDDNDNKNDNNNND
11 11 A L T 3< S+ 0 0 134 75 25 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLRLLRLLLLMLLLLMLLLLRLLYLLWVVVLL
12 12 A G T 3 S+ 0 0 38 75 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGSGGGGSGGGGGGGGRGARRRGG
13 13 A K S < S+ 0 0 153 75 62 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKEEKEEEEKEEEEEEEEKEEEEEVA
14 14 A H S S- 0 0 94 75 17 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHYHHHHHHHHHHHHHNHHFHHYHHHHL
15 15 A L + 0 0 57 75 64 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLRLRRRRLLRLLMLLILKLKKKKK
16 16 A N S S- 0 0 68 75 83 NNNNNNNNNSSNSSSSSSSSSSNSSSSSTSSSSSSASRAAKARNATHHAHHHHAHHHHVHHQQQNQQQHQ
17 17 A S S > S+ 0 0 74 75 70 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSASVTTTTTTATTTTTLSSSKVRVVAVA
18 18 A M H > S+ 0 0 137 75 78 MMMMMMMMMMMMMMMMMMMLMMVLMMMMMMMMMMVMVMVVMMMMLMVVKVVVVKVVVVEAASLQEGGGER
19 19 A E H > S+ 0 0 10 75 31 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAEEEEAEEEENDDQEETEEELE
20 20 A R H >> S+ 0 0 115 75 2 RRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRKRRRRRRR
21 21 A V H 3X S+ 0 0 66 75 82 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMVVMMMMVTIVQQLQQQQLQQQQLQQQQRLQQQQR
22 22 A E H 3X S+ 0 0 71 75 32 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEQEEQQEQEEEEDDEDDDDDDDDDENNEEEEDDDDQ
23 23 A W H X S+ 0 0 94 75 62 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKRKKKKMMKMMMMKLMLLKEEMKRKEEEMR
27 27 A K H 3X S+ 0 0 73 75 11 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKLRKKKKKR
28 28 A L H 3X S+ 0 0 94 75 0 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLMLLLLLLLLLLLLLLLLLLLLLLLL
29 29 A Q H X>S+ 0 0 81 75 18 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMVVVVVVAVVVVVVVVVVVVMVIIVVIIA
32 32 A H H 3<5S+ 0 0 54 68 1 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHQHHHHHHHHHHHHHHHHHHHHH H HH
33 33 A N T 3<5S+ 0 0 115 67 63 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNRNSSNSSSSD SSSTHHS P TA
34 34 A F T <45S- 0 0 160 50 7 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF F F I
35 35 A V T <5S+ 0 0 139 49 18 VVVVVIIIIVVVVVVVVVVVVVIVVVVVIVVVVVVVIVVVVVVVPI I I
36 36 A A < - 0 0 70 49 46 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASASSSGSSSSG S S
37 37 A L + 0 0 118 47 4 LLLLLLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLL LL LL L L
38 38 A G 0 0 69 46 8 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGG GE G G G
39 39 A A 0 0 90 41 50 AAAAAAAAAAATATTTTTTAAAAATTTTAATTTTA AT T A S
## ALIGNMENTS 71 - 74
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A S 0 0 175 65 46 STAA
2 2 A V - 0 0 109 67 5 IIVV
3 3 A S S S+ 0 0 78 67 17 SSNN
4 4 A E S > S+ 0 0 113 67 0 EEEE
5 5 A I H > S+ 0 0 86 75 32 MVVV
6 6 A Q H > S+ 0 0 115 75 2 QQQQ
7 7 A L H > S+ 0 0 21 75 12 LLLL
8 8 A M H < S+ 0 0 104 75 0 MMMM
9 9 A H H < S+ 0 0 104 75 3 HHHH
10 10 A N H >< S+ 0 0 19 75 18 NNNN
11 11 A L T 3< S+ 0 0 134 75 25 LVLL
12 12 A G T 3 S+ 0 0 38 75 36 QRGG
13 13 A K S < S+ 0 0 153 75 62 EEVV
14 14 A H S S- 0 0 94 75 17 HHHH
15 15 A L + 0 0 57 75 64 KKKK
16 16 A N S S- 0 0 68 75 83 QQHH
17 17 A S S > S+ 0 0 74 75 70 VAVV
18 18 A M H > S+ 0 0 137 75 78 GGEE
19 19 A E H > S+ 0 0 10 75 31 DELL
20 20 A R H >> S+ 0 0 115 75 2 RRRR
21 21 A V H 3X S+ 0 0 66 75 82 QQQQ
22 22 A E H 3X S+ 0 0 71 75 32 DYDD
23 23 A W H X S+ 0 0 94 75 62 EEMM
27 27 A K H 3X S+ 0 0 73 75 11 KKKK
28 28 A L H 3X S+ 0 0 94 75 0 LLLL
29 29 A Q H X>S+ 0 0 81 75 18 IIII
32 32 A H H 3<5S+ 0 0 54 68 1 HH
33 33 A N T 3<5S+ 0 0 115 67 63 TT
34 34 A F T <45S- 0 0 160 50 7
35 35 A V T <5S+ 0 0 139 49 18
36 36 A A < - 0 0 70 49 46
37 37 A L + 0 0 118 47 4
38 38 A G 0 0 69 46 8
39 39 A A 0 0 90 41 50
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 25 0 66 9 0 0 0 0 0 0 0 0 65 0 0 0.838 27 0.53
2 2 A 93 0 7 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 67 0 0 0.265 8 0.94
3 3 A 0 0 0 0 0 0 0 1 0 0 93 1 0 0 0 0 0 0 4 0 67 0 0 0.336 11 0.83
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 67 0 0 0.000 0 1.00
5 5 A 15 0 68 16 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.895 29 0.68
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 1 0 0 75 0 0 0.071 2 0.98
7 7 A 0 75 3 0 20 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.733 24 0.88
8 8 A 0 1 0 99 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.071 2 0.99
9 9 A 0 0 0 0 0 0 1 0 0 0 0 0 0 99 0 0 0 0 0 0 75 0 0 0.071 2 0.96
10 10 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 88 9 75 0 0 0.449 14 0.82
11 11 A 5 85 0 3 0 1 1 0 0 0 0 0 0 0 4 0 0 0 0 0 75 0 0 0.632 21 0.74
12 12 A 0 0 0 0 0 0 0 87 1 0 3 0 0 0 8 0 1 0 0 0 75 0 0 0.538 17 0.64
13 13 A 4 0 0 0 0 0 0 0 1 0 0 0 0 0 0 65 1 28 0 0 75 0 0 0.878 29 0.38
14 14 A 0 1 0 0 1 0 3 0 0 0 0 0 0 93 0 0 0 0 1 0 75 0 0 0.334 11 0.83
15 15 A 0 76 1 1 0 0 0 0 0 0 0 0 0 0 8 13 0 0 0 0 75 0 0 0.794 26 0.35
16 16 A 1 0 0 0 0 0 0 0 9 0 32 3 0 20 3 1 12 0 19 0 75 0 0 1.784 59 0.17
17 17 A 11 1 0 0 0 0 0 0 7 0 64 15 0 0 1 1 0 0 0 0 75 0 0 1.159 38 0.29
18 18 A 20 5 0 52 0 0 0 7 3 0 1 0 0 0 1 3 1 7 0 0 75 0 0 1.545 51 0.21
19 19 A 0 4 0 0 0 0 0 0 3 0 0 1 0 0 0 0 1 85 1 4 75 0 0 0.662 22 0.68
20 20 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 99 1 0 0 0 0 75 0 0 0.071 2 0.98
21 21 A 53 5 1 7 0 0 0 0 0 0 0 1 0 0 3 0 29 0 0 0 75 0 0 1.244 41 0.17
22 22 A 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 7 65 3 24 75 0 0 0.955 31 0.68
23 23 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
24 24 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.000 0 1.00
25 25 A 0 5 0 0 0 4 0 0 0 0 0 0 0 0 63 0 28 0 0 0 75 0 0 0.934 31 0.40
26 26 A 0 4 0 15 0 0 0 0 0 0 0 0 0 0 5 67 0 9 0 0 75 0 0 1.058 35 0.38
27 27 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 4 95 0 0 0 0 75 0 0 0.238 7 0.89
28 28 A 0 97 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.123 4 0.99
29 29 A 0 0 0 0 0 0 0 0 1 0 0 0 0 5 4 8 80 1 0 0 75 0 0 0.781 26 0.63
30 30 A 0 0 0 0 0 0 0 7 0 0 0 3 0 0 0 1 0 5 0 84 75 0 0 0.638 21 0.75
31 31 A 84 0 11 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 75 0 0 0.578 19 0.81
32 32 A 0 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 1 0 0 0 68 0 0 0.077 2 0.98
33 33 A 0 0 0 0 0 0 0 0 1 1 15 6 0 3 1 0 0 0 70 1 67 0 0 1.057 35 0.37
34 34 A 0 0 2 0 98 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0.098 3 0.93
35 35 A 78 0 20 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 49 0 0 0.601 20 0.81
36 36 A 0 0 0 0 0 0 0 4 76 0 20 0 0 0 0 0 0 0 0 0 49 0 0 0.667 22 0.53
37 37 A 0 98 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 47 0 0 0.103 3 0.95
38 38 A 0 0 0 0 0 0 0 96 0 0 0 0 0 0 0 0 0 4 0 0 46 0 0 0.179 5 0.91
39 39 A 0 0 0 0 0 0 0 0 56 0 2 41 0 0 0 0 0 0 0 0 41 0 0 0.780 26 0.50
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
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