Complet list of 1big hssp file
Complete list of 1big.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1BIG
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-03-26
HEADER NEUROTOXIN 16-JUN-98 1BIG
COMPND MOL_ID: 1; MOLECULE: TOXIN BMTX1; CHAIN: A; ENGINEERED: YES
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: MESOBUTHUS MARTENSII; ORGANISM_COMMON:
AUTHOR E.BLANC,R.ROMI-LEBRUN,O.BORNET,T.NAKAJIMA,H.DARBON
DBREF 1BIG A 2 37 UNP Q9NII6 SCK1_MESMA 22 57
SEQLENGTH 37
NCHAIN 1 chain(s) in 1BIG data set
NALIGN 72
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A0RZD1_MESMA 1.00 1.00 2 37 22 57 36 0 0 57 A0RZD1 Potassium-channel toxin protein OS=Mesobuthus martensii GN=TX1 PE=3 SV=1
2 : KAX15_MESMA 1BIG 1.00 1.00 2 37 22 57 36 0 0 57 Q9NII6 Potassium channel toxin alpha-KTx 1.5 OS=Mesobuthus martensii PE=1 SV=1
3 : V9LLY8_MESMA 0.97 1.00 2 37 22 57 36 0 0 57 V9LLY8 Toxin BmTX4 OS=Mesobuthus martensii PE=4 SV=1
4 : KAX1F_MESMA 0.94 1.00 2 37 22 57 36 0 0 57 H2ER23 Potassium channel toxin alpha-KTx 1.15 OS=Mesobuthus martensii PE=2 SV=1
5 : KAX16_MESMA 2BMT 0.69 0.86 2 37 23 58 36 0 0 58 Q9NII5 Potassium channel toxin alpha-KTx 1.6 OS=Mesobuthus martensii PE=1 SV=1
6 : KAX43_TITDI 0.69 0.81 2 37 2 37 36 0 0 37 P59925 Potassium channel toxin alpha-KTx 4.3 OS=Tityus discrepans PE=1 SV=1
7 : Q1EFP8_MESMA 0.69 0.86 2 37 23 58 36 0 0 58 Q1EFP8 Potassium channel toxin BmKTX2' OS=Mesobuthus martensii PE=3 SV=1
8 : KAX19_CENLM 0.68 0.76 2 35 2 35 34 0 0 36 P59848 Potassium channel toxin alpha-KTx 1.9 (Fragment) OS=Centruroides limbatus PE=1 SV=1
9 : KAX1E_MESMA 0.67 0.89 2 37 24 59 36 0 0 59 H2ETQ6 Potassium channel toxin alpha-KTx 1.14 OS=Mesobuthus martensii PE=2 SV=1
10 : KAX1X_MESMA 0.67 0.83 2 37 23 58 36 0 0 58 H2ER22 Potassium channel toxin alpha-KTx Kcug1a OS=Mesobuthus martensii PE=2 SV=1
11 : KAX13_MESTA 0.66 0.80 2 36 2 36 35 0 0 37 P24663 Potassium channel toxin alpha-KTx 1.3 OS=Mesobuthus tamulus PE=1 SV=2
12 : KAX1C_LEIQH 0.64 0.81 2 37 24 59 36 0 0 59 P59943 Potassium channel toxin alpha-KTx 1.12 OS=Leiurus quinquestriatus hebraeus PE=3 SV=1
13 : KAX25_CENLM 1HLY 0.64 0.75 3 37 3 38 36 1 1 39 P59847 Potassium channel toxin alpha-KTx 2.5 OS=Centruroides limbatus PE=1 SV=1
14 : KAX26_CENLM 0.64 0.82 2 34 2 34 33 0 0 34 P59849 Potassium channel toxin alpha-KTx 2.6 (Fragment) OS=Centruroides limbatus PE=1 SV=1
15 : KAX44_TITOB 0.64 0.78 2 37 2 37 36 0 0 37 P60210 Potassium channel toxin alpha-KTx 4.4 OS=Tityus obscurus PE=1 SV=1
16 : KAX27_CENLL 0.62 0.82 3 35 3 36 34 1 1 36 P45630 Potassium channel toxin alpha-KTx 2.7 (Fragment) OS=Centruroides limpidus limpidus PE=1 SV=1
17 : KGX21_MESEU 1LGL 0.62 0.76 3 36 24 57 34 0 0 57 Q9BKB7 Potassium channel toxin gamma-KTx 2.1 OS=Mesobuthus eupeus PE=1 SV=1
18 : KGX22_MESMA 0.62 0.79 3 36 24 57 34 0 0 57 P59938 Potassium channel toxin gamma-KTx 2.2 OS=Mesobuthus martensii PE=2 SV=1
19 : KAX11_LEIQH 4JTA 0.61 0.81 2 37 24 59 36 0 0 59 P13487 Potassium channel toxin alpha-KTx 1.1 OS=Leiurus quinquestriatus hebraeus PE=1 SV=4
20 : KAX1D_LEIQH 0.61 0.81 2 37 2 37 36 0 0 37 P59944 Potassium channel toxin alpha-KTx 1.13 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
21 : KAX45_TITCO 0.61 0.81 2 37 24 59 36 0 0 59 Q5G8B6 Potassium channel toxin alpha-KTx 4.5 OS=Tityus costatus PE=1 SV=1
22 : KAX46_TITST 0.61 0.78 2 37 2 37 36 0 0 37 P0CB56 Potassium channel toxin alpha-KTx 4.6 OS=Tityus stigmurus PE=1 SV=1
23 : KAX1B_CENNO 0.60 0.69 2 36 2 36 35 0 0 37 P0C182 Potassium channel toxin alpha-KTx 1.11 OS=Centruroides noxius PE=1 SV=1
24 : KAX22_CENMA 1MTX 0.59 0.81 2 37 2 38 37 1 1 39 P40755 Potassium channel toxin alpha-KTx 2.2 OS=Centruroides margaritatus PE=1 SV=1
25 : I6NWV2_HETLA 0.58 0.73 5 37 27 59 33 0 0 61 I6NWV2 Kv1.3 potassium channel blocker (Precursor) OS=Heterometrus laoticus GN=Tx3 PE=3 SV=1
26 : KAX12_LEIQH 1LIR 0.58 0.78 2 37 24 59 36 0 0 59 P45628 Potassium channel toxin alpha-KTx 1.2 OS=Leiurus quinquestriatus hebraeus PE=1 SV=2
27 : KAX41_TITSE 1HP2 0.58 0.78 2 37 2 37 36 0 0 37 P46114 Potassium channel toxin alpha-KTx 4.1 OS=Tityus serrulatus PE=1 SV=1
28 : KAX14_CENLM 0.57 0.66 2 36 2 36 35 0 0 37 P0C167 Potassium channel toxin alpha-KTx 1.4 OS=Centruroides limbatus PE=1 SV=1
29 : KAX1A_PARTR 0.57 0.77 3 37 2 36 35 0 0 37 P83112 Potassium channel toxin alpha-KTx 1.10 OS=Parabuthus transvaalicus PE=1 SV=1
30 : KAX2C_CENEL 0.57 0.83 2 35 2 36 35 1 1 39 P0C165 Potassium channel toxin alpha-KTx 2.12 OS=Centruroides elegans PE=1 SV=1
31 : KAX28_CENEL 0.56 0.78 3 37 3 38 36 1 1 39 P0C161 Potassium channel toxin alpha-KTx 2.8 OS=Centruroides elegans PE=1 SV=1
32 : KAX2B_CENEL 0.56 0.78 2 36 2 37 36 1 1 39 P0C164 Potassium channel toxin alpha-KTx 2.11 OS=Centruroides elegans PE=1 SV=1
33 : KAX3B_ODODO 0.55 0.64 3 35 4 35 33 1 1 38 P0C909 Potassium channel toxin alpha-KTx 3.11 OS=Odontobuthus doriae PE=1 SV=1
34 : KAX6A_OPICA 0.55 0.73 5 37 26 58 33 0 0 60 Q6XLL5 Potassium channel toxin alpha-KTx 6.10 OS=Opistophthalmus carinatus PE=2 SV=1
35 : KAX71_PANIM 2PTA 0.55 0.76 5 37 14 46 33 0 0 47 P55927 Potassium channel toxin alpha-KTx 7.1 (Fragment) OS=Pandinus imperator GN=PTX-1 PE=1 SV=2
36 : KAX72_PANIM 1C49 0.55 0.73 5 37 2 34 33 0 0 35 P55928 Potassium channel toxin alpha-KTx 7.2 OS=Pandinus imperator PE=1 SV=1
37 : KAX21_CENNO 1SXM 0.54 0.81 2 37 2 38 37 1 1 39 P08815 Potassium channel toxin alpha-KTx 2.1 OS=Centruroides noxius PE=1 SV=3
38 : KAX29_CENEL 0.54 0.78 2 37 2 38 37 1 1 39 P0C162 Potassium channel toxin alpha-KTx 2.9 OS=Centruroides elegans PE=1 SV=1
39 : KAX23_CENLL 0.53 0.78 3 37 3 38 36 1 1 38 P45629 Potassium channel toxin alpha-KTx 2.3 OS=Centruroides limpidus limpidus PE=1 SV=1
40 : KAX62_SCOMA 1WT7 0.52 0.76 5 37 1 33 33 0 0 34 P80719 Potassium channel toxin alpha-KTx 6.2 OS=Scorpio maurus palmatus PE=1 SV=1
41 : B8XH43_BUTOS 0.51 0.66 3 37 26 60 35 0 0 60 B8XH43 Putative potassium channel toxin Tx753 OS=Buthus occitanus israelis PE=3 SV=1
42 : D9IAV9_MESMA 0.51 0.71 2 36 4 38 35 0 0 38 D9IAV9 Potassium channel toxin (Fragment) OS=Mesobuthus martensii GN=Tx3B PE=2 SV=1
43 : F5CJV9_MESMA 0.51 0.71 2 36 25 59 35 0 0 59 F5CJV9 Tx3B OS=Mesobuthus martensii PE=3 SV=1
44 : F5CJW1_MESEU 0.51 0.77 2 36 25 59 35 0 0 59 F5CJW1 Tx3B OS=Mesobuthus eupeus PE=3 SV=1
45 : K7WHX1_MESGB 0.51 0.77 2 36 25 59 35 0 0 59 K7WHX1 Toxin alpha-KTx16.7 OS=Mesobuthus gibbosus GN=Tx3_C1 PE=3 SV=1
46 : K7WPN2_MESGB 0.51 0.77 2 36 25 59 35 0 0 59 K7WPN2 Toxin alpha-KTx16.7 OS=Mesobuthus gibbosus GN=Tx3_C3 PE=3 SV=1
47 : KA161_MESTA 0.51 0.77 2 36 2 36 35 0 0 36 P0C173 Potassium channel toxin alpha-KTx 16.1 OS=Mesobuthus tamulus PE=1 SV=1
48 : KA162_MESMA 1M2S 0.51 0.71 2 36 25 59 35 0 0 59 Q9NBG9 Potassium channel toxin alpha-KTx 16.2 OS=Mesobuthus martensii PE=1 SV=1
49 : KA163_MESMA 0.51 0.71 2 36 25 59 35 0 0 59 Q8MQL0 Potassium channel toxin alpha-KTx 16.3 OS=Mesobuthus martensii PE=2 SV=1
50 : KA165_MESGB 0.51 0.77 2 36 3 37 35 0 0 37 B3EWY1 Potassium channel toxin alpha-KTx 16.5 OS=Mesobuthus gibbosus PE=1 SV=1
51 : KA3B_MESEU 0.51 0.77 2 36 4 38 35 0 0 38 D3JXM1 Potassium channel toxin alpha-KTx MeuTx3B (Fragment) OS=Mesobuthus eupeus PE=1 SV=1
52 : KAX17_LEIQH 0.51 0.74 2 36 2 36 35 0 0 36 P45660 Potassium channel toxin alpha-KTx 1.7 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
53 : KAX2A_CENEL 0.51 0.76 2 37 2 38 37 1 1 38 P0C163 Potassium channel toxin alpha-KTx 2.10 OS=Centruroides elegans PE=1 SV=1
54 : KAX2D_CENSU 0.51 0.76 2 37 2 38 37 1 1 38 P85529 Potassium channel toxin alpha-KTx 2.13 OS=Centruroides suffusus suffusus PE=1 SV=1
55 : B8XH48_BUTOS 0.50 0.65 2 35 26 58 34 1 1 61 B8XH48 Putative potassium channel toxin Tx821 OS=Buthus occitanus israelis PE=3 SV=1
56 : KA125_LYCMC 0.50 0.76 3 36 26 59 34 0 0 60 P0CH12 Potassium channel toxin alpha-KTx 12.5 OS=Lychas mucronatus PE=2 SV=1
57 : KA158_MESMA 0.50 0.74 3 36 26 58 34 1 1 60 Q86BX0 Potassium channel toxin alpha-KTx 15.8 OS=Mesobuthus martensii PE=2 SV=1
58 : KA159_LYCMC 0.50 0.69 6 37 29 60 32 0 0 60 D9U2A8 Neurotoxin alpha-KTx 15.9 OS=Lychas mucronatus PE=2 SV=1
59 : KA232_VAEMS 0.50 0.62 5 36 4 34 32 1 1 35 P0DJ32 Potassium channel toxin alpha-KTx 23.2 OS=Vaejovis mexicanus smithi PE=1 SV=1
60 : KA121_TITSE 1WT7 0.49 0.74 3 37 6 40 35 0 0 40 P59936 Potassium channel toxin alpha-KTx 12.1 OS=Tityus serrulatus PE=1 SV=2
61 : KA122_TITTR 0.49 0.74 3 37 6 40 35 0 0 40 P0C168 Potassium channel toxin alpha-KTx 12.2 OS=Tityus trivittatus PE=1 SV=1
62 : KA123_TITCO 0.49 0.74 3 37 6 40 35 0 0 40 P0C185 Potassium channel toxin alpha-KTx 12.3 OS=Tityus costatus PE=1 SV=1
63 : KA124_TITST 0.49 0.74 3 37 6 40 35 0 0 40 P0C8L1 Potassium channel toxin alpha-KTx 12.4 OS=Tityus stigmurus PE=1 SV=1
64 : V9LLQ7_MESMA 0.49 0.71 2 36 25 59 35 0 0 59 V9LLQ7 Potassium channel toxin BmKcug3 OS=Mesobuthus martensii PE=4 SV=1
65 : KAX34_LEIQH 0.48 0.64 3 35 4 35 33 1 1 38 P46110 Potassium channel toxin alpha-KTx 3.4 OS=Leiurus quinquestriatus hebraeus PE=1 SV=1
66 : KAX61_PANIM 1WZ5 0.48 0.70 5 37 2 34 33 0 0 35 Q10726 Potassium channel toxin alpha-KTx 6.1 OS=Pandinus imperator PE=1 SV=1
67 : KAX66_OPICA 0.48 0.68 5 35 27 57 31 0 0 61 Q6XLL9 Potassium channel toxin alpha-KTx 6.6 OS=Opistophthalmus carinatus PE=2 SV=1
68 : KAX67_OPICA 0.48 0.68 5 35 27 57 31 0 0 61 Q6XLL8 Potassium channel toxin alpha-KTx 6.7 OS=Opistophthalmus carinatus PE=2 SV=1
69 : KAX6F_HEMLE 0.48 0.76 5 37 1 33 33 0 0 35 P85528 Potassium channel toxin alpha-KTx 6.15 OS=Hemiscorpius lepturus PE=1 SV=1
70 : KA127_LYCMC 0.47 0.79 3 36 26 59 34 0 0 60 P0CI48 Neurotoxin alpha-KTx 12.7 OS=Lychas mucronatus PE=2 SV=1
71 : KAX24_CENNO 0.47 0.75 2 37 2 37 36 0 0 38 Q9TXD1 Potassium channel toxin alpha-KTx 2.4 OS=Centruroides noxius PE=1 SV=1
72 : KAX_ISOMC 0.46 0.63 2 36 25 59 35 0 0 60 P0CJ24 Potassium channel toxin ImKTx88 OS=Isometrus maculatus PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A X 0 0 63 0 0
2 2 A F E -A 34 0A 103 45 24 FFFFFFFFFFFF FF FFFFFI FFF I I II LLLLLLLLLLLFFI L
3 3 A T E - 0 0A 18 62 49 TTTTTITITTTTIIIITTTTIIII TIIVIIIT III TIIIIIIIIIIIIIITT LLLLII T
4 4 A D E S+ 0 0A 134 62 37 DDDDNNNDDNDDDNNDDDNNNNDN QNDDNNND NNN NDDDDDDDDDDDNNLDN DDDDEN E
5 5 A V E S- 0 0A 59 72 28 VVVVVVVVVVVVVVVVIIVVVAVVIEAVMVVVVIIIVVVVVVVVVVVVVVVVVVVIV ILLLLVVVIIII
6 6 A K E -A 32 0A 170 73 47 KKKKSKSKRSDSKKKKKKSSKKDKSSKSRKKKKRSSKKKSPKKKKKKKKKKRKKKKKKSAAEAKKKKKKK
7 7 A a - 0 0 13 73 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
8 8 A T S S- 0 0 87 73 77 TTTTSTSTSSSTTTRTSSTTRRTTTTRSKTTTRSTTTTTTNFFSSSIFFSSYSSTSQSVGGGGFTRRRTR
9 9 A G S >> S- 0 0 24 72 64 GGAAAGATAAVTSSGSEATTGGVSGAGVSSSSGGNNSSSGNAAAAASAAAADLSGS.NGAAAAAGGTTLY
10 10 A S H 3> S+ 0 0 59 73 35 SSSSSSSSSSSSPPSPSSSSSSSPSSSSSPPPSSPEPPPSSSSSSSSSSSSSPPSSGTSSSSSSSTPPSP
11 11 A K H 34 S+ 0 0 153 73 64 KKKKSKSKSSKKKKKKYYKKPPKKKNPKKKKKPKKKKKQKRSSRRRQSSRRRQQQSGSKRRRRSPSKKKA
12 12 A Q H <> S+ 0 0 71 73 38 QQQQQQQEKQEEQQEQQQEEEEEQQQEEEQQQQQQQQQQDPEEEEEEEEEEQQQQSSQEEEEEEQDDDDD
13 13 A b H X S+ 0 0 0 73 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
14 14 A W H X S+ 0 0 109 73 57 WWWWWLWWWWWWLLLLFFWWLLWLYWLWLLLLIYYYSLLYVWWWWWWWWWWWLLLYAYLYYYYWLGAAYH
15 15 A P H > S+ 0 0 67 73 78 PPPPPPPPPPSSPPPPPPSSPPAPDSPAVPKLQGPPKKRAPTTVVVITIVVIRKKESKPDDDDTKRGDSI
16 16 A V H X S+ 0 0 32 73 68 VVVVVAVPVVVVPAAPVVVVKKPPPIKPKPPPPPHHPPPPVAAAAAAAAAAAPPPPVTKPPPPAPPPPPM
17 17 A c H X>S+ 0 0 0 73 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
18 18 A K H <5S+ 0 0 127 73 41 KKKNKKKKKEKQKKKKKKQEKKKKKKKKKKKKKKKKKKKRIKKKKKKKKKKKKKKRREKFFFFKKQRRKR
19 19 A Q H <5S+ 0 0 161 73 64 QQQQKAKAKKDRAEAESSRKEQAARREAQEDEDQKKEDDKRKKKKKKKKKKKDADGRKAKKKKKDQKKKK
20 20 A M H <5S- 0 0 88 73 80 MMMMLALALLLLQKAIRRLLAAAQKLAAAILIAQEELLRQEVVVVVVVVVVVRAAVEVQAAAAVAQQQEV
21 21 A F T <5S- 0 0 94 73 77 FFFFFVFTFFFHFFVYFFHYIIFFTHIVTYYYGTTTYYFTVTTTTTTTTTTTFFGTIVGFFFFTGTTTTT
22 22 A G S -B 32 0A 82 73 49 MMMMMMMMKMMMMMMMVVMMMMMMMMMMMMMMMMMMMMIISQQQQQQQQQQQIIMMIMMMMMMQIIMMIM
30 30 A N T 3 S- 0 0 179 73 5 NNNNNNNNNNGNNNNNNNNNNNGNNNNGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
31 31 A G T 3 S+ 0 0 28 73 67 GGGGSGSKSSKKGGGGGGKKGGKGKKGKRGGGGKRRGGGKGNNNNNRNNNNKGGGGGGKNNNNNGRRRRG
32 32 A K E < S-AB 6 29A 65 73 45 KKKKKKKKKKKKKKKKFLKKKKKKSKKKKKKKKVKKKKKSKQQQQQQQQQQQKKKRKKKKKKKQKMTTNK
33 33 A b E - B 0 28A 0 73 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
34 34 A R E -AB 2 27A 90 73 50 RRRRRKRKRRRRKKKKDDRRKKKKKRKRKHKKHKKKKKKKLRRRRRRRRRRRKKHTVIKRRRRRHKRRKT
35 35 A c - 0 0 4 72 0 CCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
36 36 A Y 0 0 100 64 0 YYYYYYY YYYYY Y FFYYYYYYYYYYY YY YFFYYYYYYYYYYYYYYYYYY YYYYYYYYY Y YY
37 37 A S 0 0 185 41 64 SSSSSTS SS SP P SSPP PGSP P N GGGNNPGP PP P TTTT G G
## ALIGNMENTS 71 - 72
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A X 0 0 63 0 0
2 2 A F E -A 34 0A 103 45 24 IY
3 3 A T E - 0 0A 18 62 49 IT
4 4 A D E S+ 0 0A 134 62 37 NS
5 5 A V E S- 0 0A 59 72 28 EK
6 6 A K E -A 32 0A 170 73 47 KE
7 7 A a - 0 0 13 73 0 CC
8 8 A T S S- 0 0 87 73 77 FN
9 9 A G S >> S- 0 0 24 72 64 AG
10 10 A S H 3> S+ 0 0 59 73 35 TS
11 11 A K H 34 S+ 0 0 153 73 64 SS
12 12 A Q H <> S+ 0 0 71 73 38 QE
13 13 A b H X S+ 0 0 0 73 0 CC
14 14 A W H X S+ 0 0 109 73 57 WY
15 15 A P H > S+ 0 0 67 73 78 TS
16 16 A V H X S+ 0 0 32 73 68 PH
17 17 A c H X>S+ 0 0 0 73 0 CC
18 18 A K H <5S+ 0 0 127 73 41 KE
19 19 A Q H <5S+ 0 0 161 73 64 KG
20 20 A M H <5S- 0 0 88 73 80 AI
21 21 A F T <5S- 0 0 94 73 77 IT
22 22 A G S -B 32 0A 82 73 49 MI
30 30 A N T 3 S- 0 0 179 73 5 NN
31 31 A G T 3 S+ 0 0 28 73 67 GK
32 32 A K E < S-AB 6 29A 65 73 45 KK
33 33 A b E - B 0 28A 0 73 0 CC
34 34 A R E -AB 2 27A 90 73 50 KY
35 35 A c - 0 0 4 72 0 CC
36 36 A Y 0 0 100 64 0 YY
37 37 A S 0 0 185 41 64 N
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000 0 1.00
2 2 A 0 27 16 0 56 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 45 0 0 1.053 35 0.75
3 3 A 2 6 56 0 0 0 0 0 0 0 0 35 0 0 0 0 0 0 0 0 62 0 0 0.934 31 0.50
4 4 A 0 2 0 0 0 0 0 0 0 0 2 0 0 0 0 0 2 3 39 53 62 0 0 1.014 33 0.63
5 5 A 69 6 17 1 0 0 0 0 3 0 0 0 0 0 0 1 0 3 0 0 72 0 0 1.030 34 0.72
6 6 A 0 0 0 0 0 0 0 0 4 1 18 0 0 0 5 66 0 3 0 3 73 0 0 1.129 37 0.53
7 7 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
8 8 A 1 0 1 0 8 0 1 5 0 0 25 40 0 0 12 1 1 0 3 0 73 1 0 1.727 57 0.23
9 9 A 4 3 0 0 0 0 1 24 32 0 19 8 0 0 0 0 0 1 6 1 72 0 0 1.802 60 0.36
10 10 A 0 0 0 0 0 0 0 1 0 22 71 4 0 0 0 0 0 1 0 0 73 0 0 0.823 27 0.64
11 11 A 0 0 0 0 0 0 3 1 1 7 19 0 0 0 15 45 7 0 1 0 73 0 0 1.603 53 0.36
12 12 A 0 0 0 0 0 0 0 0 0 1 3 0 0 0 0 1 47 40 0 8 73 0 0 1.144 38 0.61
13 13 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
14 14 A 1 27 1 0 3 41 18 1 4 0 1 0 0 1 0 0 0 0 0 0 73 0 0 1.551 51 0.43
15 15 A 8 1 5 0 0 0 0 3 4 36 11 7 0 0 4 10 1 1 0 8 73 0 0 2.126 70 0.22
16 16 A 23 0 1 1 0 0 0 0 21 41 0 1 0 4 0 7 0 0 0 0 73 0 0 1.521 50 0.31
17 17 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
18 18 A 0 0 1 0 5 0 0 0 0 0 0 0 0 0 8 74 4 5 1 0 73 0 0 0.995 33 0.58
19 19 A 0 0 0 0 0 0 0 3 12 0 3 0 0 0 8 41 12 10 0 11 73 0 0 1.751 58 0.35
20 20 A 21 16 5 7 0 0 0 0 25 0 0 0 0 0 5 3 11 7 0 0 73 0 0 1.994 66 0.20
21 21 A 7 0 7 0 32 0 10 5 0 0 0 36 0 4 0 0 0 0 0 0 73 0 0 1.614 53 0.22
22 22 A 0 0 0 4 0 0 0 88 0 0 0 0 1 0 0 0 0 0 7 0 73 0 0 0.489 16 0.77
23 23 A 6 0 4 0 0 0 3 0 0 3 18 13 10 0 18 21 4 0 1 0 72 0 0 2.115 70 0.15
24 24 A 1 1 0 0 5 0 5 12 19 19 11 5 0 10 3 1 0 0 1 4 73 0 0 2.301 76 0.15
25 25 A 0 0 1 0 0 0 0 5 27 0 1 0 0 10 14 1 16 3 21 0 73 0 0 1.908 63 0.23
26 26 A 0 0 0 0 0 0 0 84 7 0 4 0 0 0 0 5 0 0 0 0 73 4 11 0.624 20 0.76
27 27 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 69 0 0 0.131 4 0.97
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
29 29 A 3 0 12 66 0 0 0 0 0 0 1 0 0 0 0 1 16 0 0 0 73 0 0 1.047 34 0.50
30 30 A 0 0 0 0 0 0 0 4 0 0 0 0 0 0 0 0 0 0 96 0 73 0 0 0.171 5 0.94
31 31 A 0 0 0 0 0 0 0 45 0 0 5 0 0 0 11 19 0 0 19 0 73 0 0 1.394 46 0.32
32 32 A 1 1 0 1 1 0 0 0 0 0 3 3 0 0 1 70 16 0 1 0 73 0 0 1.097 36 0.54
33 33 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 73 0 0 0.000 0 1.00
34 34 A 1 1 1 0 0 0 1 0 0 0 0 3 0 5 45 38 0 0 0 3 73 0 0 1.318 43 0.49
35 35 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 72 0 0 0.000 0 1.00
36 36 A 0 0 0 0 6 0 94 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.234 7 0.99
37 37 A 0 0 0 0 0 0 0 17 0 29 32 12 0 0 0 0 0 0 10 0 41 0 0 1.509 50 0.35
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
13 25 27 1 gAk
16 25 27 1 gAk
24 26 27 1 gAk
30 26 27 1 gAk
31 25 27 1 gAk
32 26 27 1 gAk
37 26 27 1 gAk
38 26 27 1 gAk
39 25 27 1 gGk
53 26 27 1 gGk
54 26 27 1 gGk
//