Complet list of 1b3c hssp file
Complete list of 1b3c.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1B3C
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-03-21
HEADER TOXIN 08-DEC-98 1B3C
COMPND MOL_ID: 1; MOLECULE: PROTEIN (NEUROTOXIN CSE-I); CHAIN: A
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: CENTRUROIDES SCULPTURATUS; ORGANISM_CO
AUTHOR M.J.JABLONSKY,P.L.JACKSON,J.O.TRENT,D.D.WATT,N.R.KRISHNA
DBREF 1B3C A 1 64 UNP P01491 SCXI_CENSC 19 82
SEQLENGTH 64
NCHAIN 1 chain(s) in 1B3C data set
NALIGN 81
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : Q6V4Z0_CENSC 1.00 1.00 1 64 1 64 64 0 0 64 Q6V4Z0 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
2 : SCXI_CENSC 1B3C 1.00 1.00 1 64 20 83 64 0 0 86 P01491 Beta-toxin CsEI OS=Centruroides sculpturatus PE=1 SV=3
3 : Q6V4Z1_CENSC 0.88 0.94 1 64 1 64 64 0 0 64 Q6V4Z1 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
4 : SCXX_CENSC 0.88 0.94 1 64 20 83 64 0 0 86 Q95WD3 Neurotoxin E1x OS=Centruroides sculpturatus PE=2 SV=1
5 : Q6V4Z3_CENNO 0.84 0.89 1 64 1 64 64 0 0 64 Q6V4Z3 Beta-toxin (Fragment) OS=Centruroides noxius PE=3 SV=1
6 : SCX10_CENEX 0.84 0.91 1 64 1 64 64 0 0 67 Q68PG5 Neurotoxin Cex10 OS=Centruroides exilicauda PE=2 SV=1
7 : SCXY_CENNO 0.84 0.89 1 64 20 83 64 0 0 86 P45665 Toxin CngtIV OS=Centruroides noxius PE=2 SV=1
8 : Q6V4Z2_CENNO 0.83 0.89 1 64 1 64 64 0 0 64 Q6V4Z2 Beta-toxin (Fragment) OS=Centruroides noxius PE=3 SV=1
9 : SCX1_CENNO 0.83 0.89 1 64 20 83 64 0 0 86 P15223 Toxin Cn1 OS=Centruroides noxius PE=1 SV=3
10 : SCX9_CENEX 0.83 0.89 1 64 1 64 64 0 0 67 Q68PG6 Neurotoxin Cex9 OS=Centruroides exilicauda PE=2 SV=1
11 : Q6V4Y7_CENNO 0.69 0.83 1 64 1 64 64 0 0 64 Q6V4Y7 Beta-toxin (Fragment) OS=Centruroides noxius PE=3 SV=1
12 : Q6V4Y9_CENSC 0.69 0.84 1 64 1 64 64 0 0 64 Q6V4Y9 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
13 : SCX13_CENEX 0.68 0.80 1 64 8 70 65 2 3 73 Q68PG2 Neurotoxin Cex13 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
14 : SCX2_CENSC 1JZA 0.68 0.83 1 64 20 84 65 1 1 87 P01493 Toxin CsEv2 OS=Centruroides sculpturatus PE=1 SV=2
15 : SCX3_CENEX 0.68 0.83 1 64 2 66 65 1 1 69 Q68PH2 Neurotoxin Cex3 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
16 : SCX3_CENSC 2SN3 0.68 0.83 1 64 20 84 65 1 1 87 P01494 Toxin CsEv3 OS=Centruroides sculpturatus PE=1 SV=2
17 : SCX7_CENLL 0.68 0.82 1 64 20 82 65 2 3 85 P59865 Toxin Cll7 OS=Centruroides limpidus limpidus PE=2 SV=1
18 : SCXX_CENNO 0.68 0.82 1 64 20 84 65 1 1 87 P45664 Toxin CngtIII OS=Centruroides noxius PE=2 SV=1
19 : Q6V4Y8_CENNO 0.67 0.81 1 64 1 64 64 0 0 64 Q6V4Y8 Beta-toxin (Fragment) OS=Centruroides noxius PE=3 SV=1
20 : Q6V4Y3_CENSC 0.66 0.81 1 64 1 64 64 0 0 64 Q6V4Y3 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
21 : Q6V4Y4_CENSC 0.66 0.81 1 64 1 64 64 0 0 64 Q6V4Y4 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
22 : SCX39_CENSU 0.66 0.80 1 64 20 84 65 1 1 87 B7FDP2 Toxin Css39.8 OS=Centruroides suffusus suffusus PE=1 SV=1
23 : SCX4_CENEX 0.66 0.83 1 64 20 84 65 1 1 87 Q68PH1 Neurotoxin Cex4 OS=Centruroides exilicauda PE=2 SV=1
24 : SCX5B_CENLL 0.66 0.82 1 64 20 84 65 1 1 87 Q7Z1K7 Toxin Cll5b OS=Centruroides limpidus limpidus PE=2 SV=1
25 : SCX5C_CENLL 0.66 0.80 1 64 20 84 65 1 1 87 Q7YT61 Toxin Cll5c OS=Centruroides limpidus limpidus PE=2 SV=1
26 : SCX5X_CENLL 0.66 0.80 1 64 18 82 65 1 1 85 Q7Z1K6 Toxin Cll5c* OS=Centruroides limpidus limpidus PE=2 SV=1
27 : SCX5_CENNO 2KJA 0.66 0.80 1 64 20 84 65 1 1 87 P45663 Beta-toxin Cn5 OS=Centruroides noxius PE=1 SV=1
28 : SCX6_CENEX 0.65 0.83 1 64 2 66 65 1 1 69 Q68PG9 Neurotoxin Cex6 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
29 : SCX8_CENLL 0.65 0.75 1 64 5 69 65 1 1 72 Q7Z1K4 Toxin Cll8 (Fragment) OS=Centruroides limpidus limpidus PE=2 SV=1
30 : SCXR_CENLL 0.65 0.82 1 64 1 65 65 1 1 66 P45667 Toxin Cll1 OS=Centruroides limpidus limpidus PE=1 SV=1
31 : Q6V4Y2_CENNO 0.64 0.77 1 64 1 64 64 0 0 64 Q6V4Y2 Beta-toxin (Fragment) OS=Centruroides noxius PE=3 SV=1
32 : Q6V4Y5_CENSC 0.64 0.78 1 64 1 64 64 0 0 64 Q6V4Y5 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
33 : Q6V4Y6_CENSC 0.64 0.78 1 64 1 64 64 0 0 64 Q6V4Y6 Beta-toxin (Fragment) OS=Centruroides sculpturatus PE=3 SV=1
34 : SCX1_CENSC 1VNB 0.63 0.77 1 64 20 84 65 1 1 87 P01492 Toxin CsEv1 OS=Centruroides sculpturatus PE=1 SV=3
35 : SCXA_CENNO 0.63 0.75 1 64 14 78 65 1 1 81 Q94435 Insect-toxin Cn10 (Fragment) OS=Centruroides noxius PE=1 SV=2
36 : SCX6_CENLL 0.62 0.77 1 64 20 82 65 2 3 85 Q7Z1K5 Toxin Cll6 OS=Centruroides limpidus limpidus PE=2 SV=1
37 : F1CGT5_CENSU 0.58 0.74 1 64 20 84 65 1 1 87 F1CGT5 Beta-neurotoxin CssVIII (Precursor) OS=Centruroides suffusus suffusus PE=3 SV=1
38 : SC2B_CENLL 0.58 0.74 1 64 20 84 65 1 1 87 P59899 Toxin Cll2b OS=Centruroides limpidus limpidus PE=1 SV=1
39 : SCX1_CENII 0.58 0.74 1 64 1 65 65 1 1 66 P59897 Beta-toxin Cii1 OS=Centruroides infamatus infamatus PE=1 SV=1
40 : SCX3_CENNO 0.58 0.72 1 64 1 65 65 1 1 66 P80076 Toxin Cn3 OS=Centruroides noxius PE=1 SV=1
41 : SCX4_CENSU 0.58 0.74 1 64 1 65 65 1 1 66 P60266 Beta-mammal toxin Css4 OS=Centruroides suffusus suffusus PE=1 SV=1
42 : SCX6_CENSU 0.58 0.75 1 64 1 65 65 1 1 66 P60267 Beta-toxin Css6 OS=Centruroides suffusus suffusus PE=1 SV=1
43 : SCE3_CENSC 0.57 0.74 1 64 20 84 65 1 1 87 Q95WD2 Beta-toxin CsE3 OS=Centruroides sculpturatus PE=2 SV=1
44 : SCX1_CENLL 0.57 0.74 1 64 1 65 65 1 1 66 P45666 Beta-toxin Cll1m OS=Centruroides limpidus limpidus PE=1 SV=1
45 : SCX1_CENTE 0.57 0.74 1 64 1 65 65 1 1 66 P18926 Beta-toxin Clt1 OS=Centruroides tecomanus PE=1 SV=1
46 : SCX2_CENGR 0.57 0.66 1 64 1 65 65 1 1 68 P60163 Toxin Cg2 OS=Centruroides gracilis PE=2 SV=1
47 : SCX2_CENLL 0.57 0.75 1 64 1 65 65 1 1 66 P59898 Beta-toxin Cll2 OS=Centruroides limpidus limpidus PE=1 SV=1
48 : SCX2_CENSU 2LJM 0.57 0.71 1 64 1 65 65 1 1 66 P08900 Beta-mammal toxin Css2 OS=Centruroides suffusus suffusus PE=1 SV=1
49 : SCX4_CENNO 0.57 0.72 1 64 20 84 65 1 1 87 P45662 Beta-toxin Cn4 OS=Centruroides noxius PE=1 SV=1
50 : SCX5_CENEX 0.57 0.74 1 64 2 66 65 1 1 69 Q68PH0 Neurotoxin Cex5 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
51 : CEII9_CENEL 0.55 0.72 1 64 1 65 65 1 1 67 P0CH41 Beta-mammal toxin CeII9 OS=Centruroides elegans PE=1 SV=1
52 : SCX1_CENEX 0.55 0.74 1 64 20 84 65 1 1 87 Q68PH4 Neurotoxin Cex1 OS=Centruroides exilicauda PE=1 SV=1
53 : SCX2_CENEX 0.55 0.74 1 64 20 84 65 1 1 87 Q68PH3 Neurotoxin Cex2 OS=Centruroides exilicauda PE=2 SV=1
54 : SCX2_CENNO 2YC1 0.55 0.72 1 64 17 81 65 1 1 84 P01495 Beta-mammal toxin Cn2 (Fragment) OS=Centruroides noxius PE=1 SV=3
55 : SCX4_CENSC 0.55 0.74 1 64 1 65 65 1 1 66 P58778 Toxin CsEv4 OS=Centruroides sculpturatus PE=1 SV=1
56 : SCX3_CENLL 0.54 0.72 1 64 20 84 65 1 1 87 Q7Z1K9 Toxin Cll3 OS=Centruroides limpidus limpidus PE=2 SV=1
57 : SCX4_CENLL 0.54 0.71 1 64 20 84 65 1 1 87 Q7Z1K8 Toxin Cll4 OS=Centruroides limpidus limpidus PE=2 SV=1
58 : SCX7_CENEX 0.54 0.74 1 64 2 66 65 1 1 69 Q68PG8 Neurotoxin Cex7 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
59 : SCX8_CENNO 0.54 0.72 1 64 1 65 65 1 1 67 Q9TWL0 Beta-toxin Cn8 OS=Centruroides noxius PE=1 SV=2
60 : SCXM_CENSC 0.54 0.72 1 64 1 64 65 2 2 65 P56646 Toxin CsEM1 OS=Centruroides sculpturatus PE=1 SV=1
61 : SNAB_LYCMC 0.53 0.59 1 58 19 74 58 1 2 81 P0CI56 Neurotoxin LmNaTx11.1 OS=Lychas mucronatus PE=2 SV=1
62 : SCX11_CENEX 0.52 0.74 1 64 1 63 65 2 3 66 Q68PG4 Neurotoxin Cex11 OS=Centruroides exilicauda PE=2 SV=1
63 : SCX8_CENEX 0.52 0.69 1 64 2 64 65 2 3 67 Q68PG7 Toxin Cex8 (Fragment) OS=Centruroides exilicauda PE=2 SV=1
64 : SNAB6_LYCMC 0.52 0.59 1 58 19 74 58 1 2 81 P0CI57 Neurotoxin LmNaTx11.6 OS=Lychas mucronatus PE=2 SV=1
65 : SCX7_CENNO 0.51 0.71 1 54 1 55 55 1 1 55 Q9TWL1 Beta-toxin Cn7 (Fragment) OS=Centruroides noxius PE=1 SV=1
66 : SCX8_CENSC 0.48 0.67 3 64 22 82 63 2 3 85 Q95WD1 Toxin CsE8 OS=Centruroides sculpturatus PE=2 SV=1
67 : SNAY1_LYCMC 0.46 0.65 2 64 19 84 68 4 7 86 P0CI81 Neurotoxin LmNaTx34.1 OS=Lychas mucronatus PE=2 SV=1
68 : SIX3_ISOMC 0.43 0.68 1 64 1 63 65 2 3 63 P0DJK9 Beta-insect depressant toxin Im-3 OS=Isometrus maculatus PE=1 SV=1
69 : AMP1_TITDI 0.42 0.56 1 64 1 61 64 2 3 61 P0CF39 Bactridin-1 OS=Tityus discrepans PE=1 SV=1
70 : B8XH17_BUTOS 0.42 0.59 1 64 21 80 66 3 8 83 B8XH17 Putative depressant toxin Tx580 OS=Buthus occitanus israelis PE=3 SV=1
71 : F8UWP3_CENVT 0.42 0.54 1 64 35 92 65 4 8 97 F8UWP3 Alpha-toxin (Fragment) OS=Centruroides vittatus GN=IV4 PE=2 SV=1
72 : SCNA3_TITDI 0.42 0.58 1 64 21 81 64 2 3 83 C9X4K1 Toxin TdNa3 OS=Tityus discrepans PE=1 SV=1
73 : SCNA4_TITDI 0.42 0.58 1 64 21 81 64 2 3 83 P0C1X7 Ardiscretin OS=Tityus discrepans PE=1 SV=1
74 : SCNA5_TITDI 0.42 0.56 1 64 21 81 64 2 3 83 C9X4K3 Toxin TdNa5 OS=Tityus discrepans PE=2 SV=1
75 : SCX38_TITCO 0.42 0.58 1 64 21 81 64 2 3 84 Q5G8A8 Toxin-like TcoNTxP1 OS=Tityus costatus PE=1 SV=1
76 : SCX4_TITFA 0.42 0.58 1 64 2 62 64 2 3 62 P83435 Alpha-toxin Tf4 OS=Tityus fasciolatus PE=1 SV=1
77 : SCXI_TITBA 0.42 0.61 1 64 2 62 64 2 3 63 P60275 Insect toxin TbIT-1 OS=Tityus bahiensis PE=1 SV=1
78 : A9Q1Y0_MESMA 0.41 0.59 2 64 1 60 63 2 3 62 A9Q1Y0 Depressant insect toxin ITc2 (Fragment) OS=Mesobuthus martensii PE=3 SV=1
79 : J9PIJ6_9SCOR 0.41 0.64 1 64 8 68 64 2 3 71 J9PIJ6 Neurotoxin Tcl2 (Fragment) OS=Tityus clathratus PE=2 SV=1
80 : SCX6_TITDI 0.40 0.57 1 64 9 70 65 3 4 74 Q1I167 Toxin Td6 (Fragment) OS=Tityus discrepans PE=2 SV=1
81 : SCX15_TITOB 0.38 0.56 1 64 21 81 64 2 3 83 H1ZZI4 Toxin To15 OS=Tityus obscurus PE=2 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A K 0 0 136 79 2 KKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKKKK KKK
2 2 A D E +A 48 0A 85 81 20 DDEEDDDDDDEEDEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEDEEEEEEEEEEDEEDE DEDS
3 3 A G E -A 47 0A 12 82 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
4 4 A Y E -AB 46 57A 57 82 0 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
5 5 A L - 0 0 24 82 41 LLLLLLLLLPLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLIILLLLLLLLLLMIILILLPLLILLGIP
6 6 A V - 0 0 24 82 20 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVMVII
7 7 A E > - 0 0 91 82 54 EEDDDEDDDENNinnnnnNNKnnnnnnnknNKKknnnnnennnnnnnsnsnssdnnnsnnKnnKnhVGEQ
8 8 A K T 3 S+ 0 0 211 82 80 KKVVVVVAAVSSksssysSSSsssssssssSSSsskyssgyyhsssssyssssnsyhsyyKyyKhdRKHK
9 9 A T T 3 S- 0 0 80 82 57 TTKKKTKKKTTTTTTTTTTTDTTTTTTTNTTDDDTTTTTTTTTTTTTTTTTTTTTDDTTTNTTNDTADRD
10 10 A G S < S+ 0 0 4 82 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
11 11 A a - 0 0 54 82 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCICCC
12 12 A K - 0 0 104 82 9 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKSKKKKKKKKAKREKKK
13 13 A K - 0 0 63 82 59 KKKKKKKKKKYYYYYYYYYYYYYYYYYYYYYYYYYYFYYYFFYYYYYYYYYYYYYYYYFYYYYYYYKIYF
14 14 A T - 0 0 85 82 67 TTNNNSNNNSGGNGEGIGGDDGEGGGGEEGNDDDNGEEEEEEEEESEEEEEEEESAEEAEDSSDEKGSSW
15 15 A b - 0 0 14 82 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcCCC
16 16 A Y S S+ 0 0 201 73 37 YYWWYYYYYYFLYLFLWFLFFLFFFFLFFFLFFFLYFYYFFFFYFIFLFFFFFLPLYFALTWWTYTw.F.
17 17 A K - 0 0 142 78 82 KKKKKKKKKKWKIKWKKWLWWLWWWWLWKWIWWWIEKKKKKKKKKEKKKWKWWKKKKWKKPLLVKFC...
18 18 A L + 0 0 94 79 30 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLNLLLLLLLLTLLLLLLLLLLSVVF.
19 19 A G B S+C 40 0A 33 81 36 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGIGGGGGGGGGGGGGGFGGFGGIIGI
20 20 A E S S- 0 0 125 82 66 EEDDEEEKKEKEKEKEEKKKEKKKKKKKEKEKKKEDDDDDDDDDDNDDDKDKKDEEDKDDGEEGDENGTA
21 21 A N >> - 0 0 7 80 19 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNNSNNNNNDNNDNNNNNN
22 22 A D H 3>>S+ 0 0 117 81 53 DDDDDKDDDKEEKEEEKEEEEEEEEEEEEEKEEEKGDDDDDDDDDSDDDEDEEDVDDEDDSEESDSDESH
23 23 A F H 3>5S+ 0 0 161 82 64 FFYYYFYYYFGGYGFGYGGHGGFNNNGFHNNHHHNYYYYYYYYYYHYYYGYGGYYYYGYYNYYNYYYFWF
24 24 A c H <>5S+ 0 0 0 82 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
25 25 A N H X5S+ 0 0 68 82 76 NNNNNNNNNNDDNDDDIDDDDDDDDDDDDDDDDDDDLLLLLKLLLNLLLDLDDLDLLDLLNIINLDNNNE
26 26 A R H <5S+ 0 0 206 82 61 RRRRRRRRRRKKSKKKDKKLKKKKMMKKTKMLTTMRRRRRRRRRRERRRKRKKRKRRKRRGAAGRKRKTR
27 27 A E H < - 0 0 54 82 71 PPPPSASSSAPPPPPPPPPPPPPPPPPPPPPPPPPPYYYYYYYYYPYYYPYPPYPYYPYYPPPPYPPPPP
52 52 A D T 3 S+ 0 0 146 82 18 DDDDDEDDDEEEEEEEEEEEEEEDDDEEEEEEEEENEEEEEEEEEDEEEEEEEEEEEEEEDEEDEEEEDD
53 53 A S T 3 S+ 0 0 87 82 63 SSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSQQQQQQQQQSQQQSQSSQSQQSQQSNNSQDSNNW
54 54 A T S < S- 0 0 19 82 65 TTTTTTTTTTTTITTTKTTTTTTTTTTTTTTTTTTKAAAAAAAAATAAATATTATAATAAVKKVATSAVV
55 55 A Q + 0 0 115 80 70 QQQQPPPPPPPPPPSPPPPPPPSPPPPSPPPPPPPPVVVVVVVVVQVVVPVPPIPVVPVVPPPP KpKKP
56 56 A T - 0 0 30 80 54 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTVVVVVVVVVVVVVTVTTVTVVTVVTSST TiVIT
57 57 A W B S+B 4 0A 55 80 14 WWWWWWWWWWYYWYYYWYYYYYYYYYYYWYYYYYYWWWWWWWWWWYWWWYWYYWWWWYWWYYYY WWWFW
58 58 A P S S- 0 0 97 81 41 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP PTEDS
59 59 A L - 0 0 33 79 57 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLILLLILLLLLLLLLLILLLILIILLLLILL YY LYSSY
60 60 A P S S- 0 0 95 79 50 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPKPPPPPPPPKPPPPPDPPPPP PP IESNE
61 61 A N S S+ 0 0 179 79 52 NNNNNNNNNNNNDNNNNNNNNNNNNNNNNNGNNNGGNKKNNNKKNGKNNGKGGNDNKGKN EE GKTNT
62 62 A K S S- 0 0 165 79 34 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK KK KNNLN
63 63 A T 0 0 105 79 64 TTTTRSRTTSTSTSSSTTSSSSSSSSSSSSTSSSTSTTTTTTKTTTTTTSTSSRPTRSKT SS LTTKT
64 64 A a 0 0 69 79 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CC CCCCC
## ALIGNMENTS 71 - 81
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A K 0 0 136 79 2 KKKKKKK KKK
2 2 A D E +A 48 0A 85 81 20 DNNDEEEDEEE
3 3 A G E -A 47 0A 12 82 0 GGGGGGGGGGG
4 4 A Y E -AB 46 57A 57 82 0 YYYYYYYYYYY
5 5 A L - 0 0 24 82 41 PIIIPPPILLP
6 6 A V - 0 0 24 82 20 VIIIAAVRMML
7 7 A E > - 0 0 91 82 54 EEEEDDDGDED
8 8 A K T 3 S+ 0 0 211 82 80 HPPHSSSSRAS
9 9 A T T 3 S- 0 0 80 82 57 SKKRKKRDENS
10 10 A G S < S+ 0 0 4 82 0 GGGGGGGGGGG
11 11 A a - 0 0 54 82 2 CCCCCCCCCCC
12 12 A K - 0 0 104 82 9 KKKKKKKKKKK
13 13 A K - 0 0 63 82 59 YYYYVVVVLRA
14 14 A T - 0 0 85 82 67 TSSSTTTSSSG
15 15 A b - 0 0 14 82 0 CCCCCCCCCCC
16 16 A Y S S+ 0 0 201 73 37 .....FFLF..
17 17 A K - 0 0 142 78 82 .SFFFFFWITF
18 18 A L + 0 0 94 79 30 .WWFLTT.RLF
19 19 A G B S+C 40 0A 33 81 36 WGGGTGG.PRG
20 20 A E S S- 0 0 125 82 66 KSSTAVAGSPT
21 21 A N >> - 0 0 7 80 19 NSSNAG.N.GN
22 22 A D H 3>>S+ 0 0 117 81 53 ETTSG.GDGHS
23 23 A F H 3>5S+ 0 0 161 82 64 YWWWYYYFYYW
24 24 A c H <>5S+ 0 0 0 82 0 CCCCCCCCCCC
25 25 A N H X5S+ 0 0 68 82 76 DNNNNDDDGAN
26 26 A R H <5S+ 0 0 206 82 61 KRRTTTKKRNT
27 27 A E H < - 0 0 54 82 71 PPPPPPPPPPT
52 52 A D T 3 S+ 0 0 146 82 18 DDDDDDDDDDD
53 53 A S T 3 S+ 0 0 87 82 63 NNNNSSSNRSD
54 54 A T S < S- 0 0 19 82 65 VVVVAAVEVVS
55 55 A Q + 0 0 115 80 70 PKKKSSP.KKK
56 56 A T - 0 0 30 80 54 .IIIVVVTVII
57 57 A W B S+B 4 0A 55 80 14 .FFFWWYWWWW
58 58 A P S S- 0 0 97 81 41 LDDDDDDKSDN
59 59 A L - 0 0 33 79 57 KYYSSSNYYSA
60 60 A P S S- 0 0 95 79 50 TYYNAAAEAAK
61 61 A N S S+ 0 0 179 79 52 NNNNTTSSTTT
62 62 A K S S- 0 0 165 79 34 QNNNNNNNNNN
63 63 A T 0 0 105 79 64 RKKKKKKTTTK
64 64 A a 0 0 69 79 0 CCCCCCCCCCC
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 97 0 0 0 0 79 0 0 0.118 3 0.98
2 2 A 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 72 2 25 81 0 0 0.730 24 0.80
3 3 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
4 4 A 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
5 5 A 0 74 13 1 0 0 0 1 0 10 0 0 0 0 0 0 0 0 0 0 82 0 0 0.824 27 0.58
6 6 A 85 1 6 4 0 0 0 0 2 0 0 0 0 0 1 0 0 0 0 0 82 0 0 0.625 20 0.79
7 7 A 1 0 1 0 0 0 0 2 0 0 6 0 0 1 0 9 1 15 49 15 82 0 46 1.599 53 0.45
8 8 A 7 0 0 0 0 0 12 1 4 2 50 0 0 7 2 11 0 0 1 1 82 0 0 1.692 56 0.20
9 9 A 0 0 0 0 0 0 0 0 1 0 2 62 0 0 4 12 0 1 5 12 82 0 0 1.275 42 0.43
10 10 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
11 11 A 0 0 1 0 0 0 0 0 0 0 0 0 99 0 0 0 0 0 0 0 82 0 0 0.066 2 0.97
12 12 A 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 95 0 1 0 0 82 0 0 0.263 8 0.91
13 13 A 5 1 1 0 6 0 70 0 1 0 0 0 0 0 1 15 0 0 0 0 82 0 0 1.067 35 0.41
14 14 A 0 0 1 0 0 1 0 18 2 0 17 9 0 0 0 1 0 30 11 9 82 0 0 1.889 63 0.33
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 82 9 1 0.000 0 1.00
16 16 A 0 18 1 0 44 8 22 0 1 1 0 4 0 0 0 0 0 0 0 0 73 1 0 1.514 50 0.63
17 17 A 1 6 5 0 9 24 0 0 0 1 1 1 1 0 0 46 0 3 0 0 78 1 0 1.619 54 0.18
18 18 A 3 84 0 0 4 3 0 0 0 0 1 4 0 0 1 0 0 0 1 0 79 0 0 0.751 25 0.69
19 19 A 0 0 5 0 2 1 0 88 0 1 0 1 0 0 1 0 0 0 0 0 81 0 0 0.572 19 0.64
20 20 A 1 0 0 0 0 0 0 5 4 1 4 4 0 0 0 29 0 24 2 26 82 2 0 1.761 58 0.34
21 21 A 0 0 0 0 0 0 0 3 1 0 4 0 0 0 0 0 0 0 89 4 80 1 0 0.499 16 0.81
22 22 A 1 0 0 0 0 0 0 5 0 0 9 2 0 2 0 7 0 36 0 37 81 0 0 1.526 50 0.46
23 23 A 0 0 0 0 13 6 48 16 0 0 0 0 0 7 0 0 0 0 10 0 82 0 0 1.504 50 0.35
24 24 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
25 25 A 0 22 4 0 0 0 0 1 1 0 0 0 0 0 0 1 0 1 28 41 82 0 0 1.390 46 0.24
26 26 A 0 2 0 5 0 0 0 2 2 0 1 10 0 0 44 29 0 1 1 1 82 0 0 1.582 52 0.38
27 27 A 2 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 94 0 1 82 0 0 0.311 10 0.85
28 28 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
29 29 A 0 0 1 0 0 0 0 0 0 0 1 2 0 0 9 85 0 1 0 0 82 4 0 0.597 19 0.79
30 30 A 0 12 1 8 3 6 4 0 42 0 3 0 0 0 1 1 17 1 0 1 78 0 0 1.878 62 0.11
31 31 A 1 1 1 0 3 0 0 1 0 6 4 0 0 0 8 56 18 0 0 0 78 0 0 1.447 48 0.39
32 32 A 1 0 1 0 0 0 21 6 1 0 1 0 0 15 0 15 1 4 34 0 82 0 0 1.816 60 0.12
33 33 A 1 0 9 0 0 0 1 35 9 0 0 0 0 0 9 1 34 1 0 0 82 0 0 1.580 52 0.23
34 34 A 0 0 0 0 0 0 0 54 1 0 16 1 0 0 0 26 0 1 0 1 82 17 1 1.190 39 0.36
35 35 A 0 0 0 0 0 0 2 88 5 0 6 0 0 0 0 0 0 0 0 0 65 0 0 0.493 16 0.80
36 36 A 0 0 0 0 0 0 0 15 20 0 63 0 0 0 0 0 0 0 2 0 65 1 0 0.965 32 0.57
37 37 A 0 0 0 0 0 3 60 24 0 0 11 0 0 0 0 1 0 0 1 0 80 0 0 1.095 36 0.14
38 38 A 0 0 0 0 0 0 0 98 0 0 0 0 2 0 0 0 0 0 0 0 82 0 0 0.115 3 0.94
39 39 A 0 0 1 0 1 2 93 0 0 0 2 0 0 0 0 0 0 0 0 0 82 0 0 0.359 11 0.88
40 40 A 0 0 0 0 0 0 0 0 0 0 0 2 98 0 0 0 0 0 0 0 82 0 0 0.115 3 0.94
41 41 A 0 0 0 0 0 2 76 0 10 0 0 0 0 7 1 0 2 0 0 1 82 0 4 0.918 30 0.48
42 42 A 0 0 0 0 2 13 1 17 46 0 10 2 0 0 0 6 0 0 1 0 82 0 0 1.614 53 0.18
43 43 A 2 9 1 0 76 0 0 0 0 10 1 0 0 0 0 1 0 0 0 0 82 0 0 0.900 30 0.50
44 44 A 0 0 0 0 0 0 1 43 51 0 1 1 0 0 0 0 0 1 1 0 82 0 0 0.975 32 0.63
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
46 46 A 0 0 0 0 0 72 28 0 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.593 19 0.88
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 82 0 0 0.000 0 1.00
48 48 A 0 0 1 0 0 0 12 0 0 0 0 23 0 0 2 0 2 56 1 1 82 0 0 1.262 42 0.23
49 49 A 0 0 0 0 0 0 0 66 0 0 0 0 0 22 0 0 4 1 6 1 82 0 0 1.007 33 0.44
50 50 A 0 93 0 2 5 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 82 0 0 0.308 10 0.97
51 51 A 0 0 0 0 0 0 23 0 2 68 5 1 0 0 0 0 0 0 0 0 82 0 0 0.891 29 0.29
52 52 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 65 1 34 82 0 0 0.703 23 0.81
53 53 A 0 0 0 0 0 1 0 0 0 0 60 0 0 0 1 0 23 0 12 2 82 0 0 1.101 36 0.36
54 54 A 13 0 1 0 0 0 0 0 27 0 2 50 0 0 0 5 0 1 0 0 82 1 0 1.314 43 0.35
55 55 A 21 0 1 0 0 0 0 0 0 52 6 0 0 0 0 11 8 0 0 0 80 1 1 1.336 44 0.29
56 56 A 30 0 9 0 0 0 0 0 0 0 3 59 0 0 0 0 0 0 0 0 80 0 0 0.979 32 0.45
57 57 A 0 0 0 0 5 55 40 0 0 0 0 0 0 0 0 0 0 0 0 0 80 0 0 0.845 28 0.86
58 58 A 0 1 0 0 0 0 0 0 0 81 2 1 0 0 0 1 0 1 1 10 81 0 0 0.758 25 0.59
59 59 A 0 70 9 0 0 0 10 0 1 0 8 0 0 0 0 1 0 0 1 0 79 0 0 1.060 35 0.43
60 60 A 0 0 1 0 0 0 3 0 6 76 1 1 0 0 0 4 0 4 3 1 79 0 0 1.039 34 0.49
61 61 A 0 0 0 0 0 0 0 11 0 0 3 9 0 0 0 11 0 3 61 3 79 0 0 1.292 43 0.47
62 62 A 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 81 1 0 16 0 79 0 0 0.578 19 0.66
63 63 A 0 1 0 0 0 0 0 0 0 1 35 43 0 0 6 13 0 0 0 0 79 0 0 1.277 42 0.36
64 64 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 79 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
13 8 15 1 iIk
14 8 27 1 nKs
15 8 9 1 nKs
16 8 27 1 nKs
17 8 27 1 nTy
18 8 27 1 nKs
22 8 27 1 nKs
23 8 27 1 nKs
24 8 27 1 nKs
25 8 27 1 nKs
26 8 25 1 nKs
27 8 27 1 nKs
28 8 9 1 nKs
29 8 12 1 kKs
30 8 8 1 nKs
34 8 27 1 kKs
35 8 21 1 nKs
36 8 27 1 nMk
37 8 27 1 nSy
38 8 27 1 nHs
39 8 8 1 nHs
40 8 8 1 eLg
41 8 8 1 nSy
42 8 8 1 nSy
43 8 27 1 nYh
44 8 8 1 nLs
45 8 8 1 nHs
46 8 8 1 nKs
47 8 8 1 nHs
48 8 8 1 sKs
49 8 27 1 nSy
50 8 9 1 sKs
51 8 8 1 nHs
52 8 27 1 sKs
53 8 27 1 sKs
54 8 24 1 dKn
55 8 8 1 nKs
56 8 27 1 nYy
57 8 27 1 nYh
58 8 9 1 sKs
59 8 8 1 nYy
60 8 8 1 nSy
62 8 8 1 nIy
63 8 9 1 nIy
65 8 8 1 nYh
66 6 27 1 hEd
67 15 33 2 cKIw
67 39 59 2 yFWk
67 53 75 1 pDi
68 33 33 1 gTg
70 36 56 2 yKWk
71 37 71 1 yIn
80 39 47 1 yAw
//