Complet list of 1ayj hssp file
Complete list of 1ayj.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1AYJ
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-03-19
HEADER FUNGICIDE 05-NOV-97 1AYJ
COMPND MOL_ID: 1; MOLECULE: ANTIFUNGAL PROTEIN 1; CHAIN: A; SYNONYM: RS-AFP1
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: RAPHANUS SATIVUS VAR. NIGER; ORGANISM_
AUTHOR F.FANT,F.A.M.BORREMANS
DBREF 1AYJ A 2 51 UNP P30231 AFP1_SINAL 2 51
SEQLENGTH 51
NCHAIN 1 chain(s) in 1AYJ data set
NALIGN 147
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : A7X6E0_BRAJU 1.00 1.00 2 51 31 80 50 0 0 80 A7X6E0 Defensin OS=Brassica juncea PE=4 SV=1
2 : DEF1_BRANA 1.00 1.00 2 44 2 44 43 0 0 44 P69240 Defensin-like protein 1 (Fragment) OS=Brassica napus GN=AFP1 PE=1 SV=1
3 : DEF1_RAPSA 1.00 1.00 2 51 31 80 50 0 0 80 P69241 Defensin-like protein 1 OS=Raphanus sativus GN=AFP1 PE=1 SV=1
4 : DEF1_SINAL 1.00 1.00 2 51 2 51 50 0 0 51 P30231 Defensin-like protein 1 OS=Sinapis alba PE=1 SV=3
5 : E3WAM6_BRAJU 1.00 1.00 2 51 2 51 50 0 0 51 E3WAM6 Defensin (Fragment) OS=Brassica juncea GN=Bj-AFP1 PE=2 SV=1
6 : M4CVH9_BRARP 1.00 1.00 2 51 31 80 50 0 0 80 M4CVH9 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA008226 PE=4 SV=1
7 : Q003I3_RAPSA 1.00 1.00 2 51 31 80 50 0 0 80 Q003I3 Antifungal rafp1 OS=Raphanus sativus PE=4 SV=1
8 : T1SRQ6_BRANA 1.00 1.00 2 51 31 80 50 0 0 80 T1SRQ6 Defensin OS=Brassica napus GN=def2 PE=4 SV=1
9 : V4JSJ3_THESL 1.00 1.00 2 51 31 80 50 0 0 80 V4JSJ3 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019396mg PE=4 SV=1
10 : C9WGT1_ORYVI 0.98 1.00 2 51 31 80 50 0 0 80 C9WGT1 Defensin OS=Orychophragmus violaceus PE=4 SV=1
11 : D7KT75_ARALL 0.98 0.98 2 51 31 80 50 0 0 80 D7KT75 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_476731 PE=4 SV=1
12 : DEF13_ARATH 0.98 1.00 2 51 31 80 50 0 0 80 P30224 Defensin-like protein 13 OS=Arabidopsis thaliana GN=PDF1.1 PE=1 SV=3
13 : G8GZ63_9BRAS 0.98 1.00 2 51 31 80 50 0 0 80 G8GZ63 Antifungal peptide 2 OS=Heliophila coronopifolia GN=AFP2 PE=4 SV=1
14 : I2FKH4_BRAOV 0.98 0.98 2 44 24 66 43 0 0 66 I2FKH4 Thionin (Fragment) OS=Brassica oleracea var. viridis GN=BoT6 PE=4 SV=1
15 : J7ENB9_BRAOT 0.98 0.98 2 51 31 80 50 0 0 80 J7ENB9 Downy mildew resistance-related protein DMR1 OS=Brassica oleracea var. italica PE=4 SV=1
16 : Q94IN7_BRAOL 0.98 0.98 2 51 31 80 50 0 0 80 Q94IN7 Defensin (Precursor) OS=Brassica oleracea GN=def PE=4 SV=1
17 : DEF2A_SINAL 0.96 1.00 2 51 2 51 50 0 0 51 P30232 Defensin-like protein 2A OS=Sinapis alba PE=1 SV=3
18 : DEF2_RAPSA 0.96 0.98 2 51 31 80 50 0 0 80 P30230 Defensin-like protein 2 OS=Raphanus sativus GN=AFP2 PE=1 SV=4
19 : K4ULH3_ARAHH 0.96 0.98 2 51 31 80 50 0 0 80 K4ULH3 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.1a PE=4 SV=1
20 : M4CHQ7_BRARP 0.96 0.98 2 51 31 80 50 0 0 80 M4CHQ7 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA003740 PE=4 SV=1
21 : Q29SA3_ARAHA 0.96 0.98 2 51 31 80 50 0 0 80 Q29SA3 Putative plant defensin PDF1.4 OS=Arabidopsis halleri PE=4 SV=1
22 : Q52MY5_SINAL 0.94 0.98 2 51 31 80 50 0 0 80 Q52MY5 Antifungal protein OS=Sinapis alba PE=4 SV=1
23 : V4KJX5_THESL 0.94 0.96 2 51 30 79 50 0 0 79 V4KJX5 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019398mg PE=4 SV=1
24 : V4KLV0_THESL 0.94 0.98 2 51 31 80 50 0 0 80 V4KLV0 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019395mg PE=4 SV=1
25 : I2FKH3_BRAOV 0.93 0.95 2 44 16 58 43 0 0 58 I2FKH3 Thionin (Fragment) OS=Brassica oleracea var. viridis GN=BoT5 PE=4 SV=1
26 : B1N8L9_BRAOG 0.92 0.96 2 51 30 79 50 0 0 79 B1N8L9 Defensin OS=Brassica oleracea var. gemmifera PE=4 SV=1
27 : B7X6W1_BRARC 0.92 0.96 2 51 30 79 50 0 0 79 B7X6W1 Defensin 1.2 OS=Brassica rapa subsp. chinensis GN=BcAF PE=4 SV=1
28 : D2KMP4_ORYSJ 0.92 0.96 2 51 31 80 50 0 0 80 D2KMP4 Insect resistance protein (Precursor) OS=Oryza sativa subsp. japonica GN=D1 PE=4 SV=1
29 : D7KT74_ARALL 0.92 0.96 2 51 31 80 50 0 0 80 D7KT74 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_895457 PE=4 SV=1
30 : DEF14_ARATH 0.92 0.98 2 51 31 80 50 0 0 80 O80995 Defensin-like protein 14 OS=Arabidopsis thaliana GN=PDF1.3 PE=2 SV=1
31 : DEF3_BRANA 0.92 0.96 2 51 30 79 50 0 0 79 Q39313 Defensin-like protein 3 OS=Brassica napus GN=AFP3 PE=3 SV=1
32 : DEF3_RAPSA 0.92 0.96 2 51 30 79 50 0 0 79 O24332 Defensin-like protein 3 OS=Raphanus sativus GN=AFP3 PE=3 SV=1
33 : E3UPX5_BRARO 0.92 0.96 2 51 30 79 50 0 0 79 E3UPX5 Defensin 1.2 (Fragment) OS=Brassica rapa subsp. oleifera GN=PDF1.2 PE=2 SV=1
34 : G8GZ65_9BRAS 0.92 0.96 2 51 31 80 50 0 0 80 G8GZ65 Antifungal peptide 4 OS=Heliophila coronopifolia GN=AFP4 PE=4 SV=1
35 : I0J3G3_ARAHH 0.92 0.92 2 51 31 80 50 0 0 80 I0J3G3 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1-8a PE=4 SV=1
36 : M4DH32_BRARP 0.92 0.96 2 51 30 79 50 0 0 79 M4DH32 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA015809 PE=4 SV=1
37 : M4DH34_BRARP 0.92 0.96 2 51 31 80 50 0 0 80 M4DH34 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA015811 PE=4 SV=1
38 : Q58QQ0_BRANA 0.92 0.96 2 51 30 79 50 0 0 79 Q58QQ0 Defensin OS=Brassica napus GN=def3 PE=4 SV=1
39 : Q8H6K0_BRARP 0.92 0.96 2 51 31 80 50 0 0 80 Q8H6K0 Defensin OS=Brassica rapa subsp. pekinensis PE=4 SV=1
40 : R0I7T7_9BRAS 0.92 0.96 2 51 31 80 50 0 0 80 R0I7T7 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021662mg PE=4 SV=1
41 : T1SQZ6_BRANA 0.92 0.96 2 51 31 80 50 0 0 80 T1SQZ6 Defensin OS=Brassica napus GN=def4 PE=4 SV=1
42 : V4JQS1_THESL 0.92 0.94 2 51 30 79 50 0 0 79 V4JQS1 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019399mg PE=4 SV=1
43 : V4K957_THESL 0.92 0.94 2 51 29 78 50 0 0 78 V4K957 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019399mg PE=4 SV=1
44 : V4LS60_THESL 0.92 0.96 2 51 30 79 50 0 0 79 V4LS60 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10000662mg PE=4 SV=1
45 : E3UPX6_MANIN 0.91 0.96 5 51 1 47 47 0 0 47 E3UPX6 Defensin 1.2 (Fragment) OS=Mangifera indica GN=PDF1.2 PE=2 SV=1
46 : I2FKH5_BARVU 0.91 0.98 2 44 24 66 43 0 0 66 I2FKH5 Thionin (Fragment) OS=Barbarea vulgaris GN=BvT2 PE=4 SV=1
47 : DEF15_ARATH 0.90 0.96 2 51 31 80 50 0 0 80 O80994 Putative defensin-like protein 15 OS=Arabidopsis thaliana GN=PDF1.2B PE=3 SV=1
48 : DEF16_ARATH 0.90 0.96 2 51 31 80 50 0 0 80 Q9FI23 Defensin-like protein 16 OS=Arabidopsis thaliana GN=PDF1.2A PE=2 SV=1
49 : DEF17_ARATH 0.90 0.96 2 51 31 80 50 0 0 80 Q9FI22 Defensin-like protein 17 OS=Arabidopsis thaliana GN=PDF1.2C PE=2 SV=1
50 : DEF4_RAPSA 0.90 0.96 2 51 31 80 50 0 0 80 O24331 Defensin-like protein 4 OS=Raphanus sativus GN=AFP4 PE=3 SV=1
51 : I0J3I1_ARAHH 0.90 0.98 2 51 31 80 50 0 0 80 I0J3I1 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.2b PE=4 SV=1
52 : K4ULY8_ARAHH 0.90 0.96 2 51 31 80 50 0 0 80 K4ULY8 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.2a PE=4 SV=1
53 : K4UNB3_ARAHH 0.90 0.96 2 51 31 80 50 0 0 80 K4UNB3 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.1b PE=4 SV=1
54 : Q29SA4_ARAHA 0.90 0.98 2 51 31 80 50 0 0 80 Q29SA4 Putative plant defensin PDF1.3 OS=Arabidopsis halleri PE=4 SV=1
55 : Q29SA5_ARAHA 0.90 0.96 2 51 31 80 50 0 0 80 Q29SA5 Putative plant defensin PDF1.2 OS=Arabidopsis halleri PE=4 SV=1
56 : Q29SA6_ARAHA 0.90 0.96 2 51 31 80 50 0 0 80 Q29SA6 Putative plant defensin PDF1.1 OS=Arabidopsis halleri PE=4 SV=1
57 : Q6TXV2_BRARP 0.90 0.94 2 51 31 80 50 0 0 80 Q6TXV2 Defensin OS=Brassica rapa subsp. pekinensis PE=4 SV=1
58 : R0H2M6_9BRAS 0.90 0.94 2 51 30 79 50 0 0 79 R0H2M6 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10006152mg PE=4 SV=1
59 : V4M310_THESL 0.90 0.95 13 51 29 67 39 0 0 67 V4M310 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10000535mg PE=4 SV=1
60 : D7MI35_ARALL 0.88 0.92 2 51 29 78 50 0 0 78 D7MI35 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_915784 PE=4 SV=1
61 : I2FKH2_NASOF 0.88 0.98 2 44 24 66 43 0 0 66 I2FKH2 Thionin (Fragment) OS=Nasturtium officinale GN=NoT2 PE=4 SV=1
62 : K4ULH7_ARAHH 0.88 0.94 3 51 32 80 49 0 0 80 K4ULH7 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.2c PE=4 SV=1
63 : Q9FS38_EUTJA 0.88 0.96 2 51 31 80 50 0 0 80 Q9FS38 Gamma-thionin1 (Precursor) OS=Eutrema japonica PE=4 SV=1
64 : R0GDF4_9BRAS 0.88 0.94 2 51 31 80 50 0 0 80 R0GDF4 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021298mg PE=4 SV=1
65 : R0GJN4_9BRAS 0.88 0.94 2 51 31 80 50 0 0 80 R0GJN4 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021234mg PE=4 SV=1
66 : R0I1A7_9BRAS 0.88 0.94 2 51 31 80 50 0 0 80 R0I1A7 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021237mg PE=4 SV=1
67 : R0IGM3_9BRAS 0.88 0.94 2 51 31 80 50 0 0 80 R0IGM3 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021232mg PE=4 SV=1
68 : V9NJT4_HIRIN 0.88 0.93 2 43 30 71 42 0 0 71 V9NJT4 Defensin 1.2B (Fragment) OS=Hirschfeldia incana GN=pdf1.2b PE=2 SV=1
69 : Q5KU48_EUTJA 0.86 0.96 2 51 31 80 50 0 0 80 Q5KU48 Gamma-thionin2 (Precursor) OS=Eutrema japonica PE=4 SV=1
70 : Q5MGT4_LEPMY 0.86 0.92 2 51 32 81 50 0 0 81 Q5MGT4 Defensin OS=Lepidium meyenii GN=Def PE=4 SV=1
71 : V4KCR2_THESL 0.84 0.94 3 51 32 80 49 0 0 80 V4KCR2 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019394mg PE=4 SV=1
72 : V4M8U4_THESL 0.84 0.90 2 51 31 80 50 0 0 80 V4M8U4 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10019397mg PE=4 SV=1
73 : R0GJB8_9BRAS 0.82 0.94 2 51 31 80 50 0 0 80 R0GJB8 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021235mg PE=4 SV=1
74 : R0IGN3_9BRAS 0.82 0.94 2 51 29 78 50 0 0 78 R0IGN3 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10021242mg PE=4 SV=1
75 : V5UZU2_BRAJU 0.80 0.90 2 51 31 80 50 0 0 80 V5UZU2 Plant defensin OS=Brassica juncea PE=4 SV=1
76 : R0HXD2_9BRAS 0.78 0.90 2 51 33 82 50 0 0 82 R0HXD2 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10022014mg PE=4 SV=1
77 : D7KB18_ARALL 0.76 0.88 2 51 32 81 50 0 0 81 D7KB18 Cysteine-rich antifungal protein 4 OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892825 PE=4 SV=1
78 : DEF2B_SINAL 0.76 0.86 2 51 2 52 51 1 1 52 Q10989 Defensin-like protein 2B OS=Sinapis alba PE=1 SV=1
79 : G8GZ62_9BRAS 0.76 0.84 2 51 30 79 50 0 0 79 G8GZ62 Antifungal peptide 1 OS=Heliophila coronopifolia GN=AFP1 PE=4 SV=1
80 : DEF1_NIGSA 0.74 0.88 2 51 1 50 50 0 0 50 P86972 Defensin D1 OS=Nigella sativa PE=1 SV=1
81 : DEF2_NIGSA 0.74 0.90 2 51 1 50 50 0 0 50 P86973 Defensin D2 OS=Nigella sativa PE=1 SV=1
82 : G8GZ64_9BRAS 0.74 0.84 2 51 30 79 50 0 0 79 G8GZ64 Antifungal peptide 3 OS=Heliophila coronopifolia GN=AFP3 PE=4 SV=1
83 : M4CVH8_BRARP 0.72 0.94 2 51 31 80 50 0 0 80 M4CVH8 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA008225 PE=4 SV=1
84 : T1SRV8_BRANA 0.72 0.94 2 51 31 80 50 0 0 80 T1SRV8 Defensin OS=Brassica napus GN=def1 PE=4 SV=1
85 : L0S7C4_ARAHH 0.70 0.82 2 51 31 80 50 0 0 80 L0S7C4 Defensin OS=Arabidopsis halleri subsp. halleri GN=AhPDF1.8b PE=4 SV=1
86 : D7MMH1_ARALL 0.67 0.73 5 51 23 71 49 2 2 71 D7MMH1 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_330953 PE=4 SV=1
87 : I2FKH6_BARVU 0.62 0.71 2 51 23 74 52 2 2 78 I2FKH6 Thionin (Fragment) OS=Barbarea vulgaris GN=BvT4 PE=4 SV=1
88 : A5AHS9_VITVI 0.54 0.74 2 51 33 82 50 0 0 82 A5AHS9 Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_040160 PE=4 SV=1
89 : DEF1_AESHI 0.54 0.66 3 51 1 50 50 1 1 50 Q7M1F3 Defensin-like protein 1 OS=Aesculus hippocastanum PE=1 SV=1
90 : E8ZB57_9APIA 0.54 0.70 2 49 42 89 50 2 4 92 E8ZB57 Plant defensin OS=Bupleurum kaoi GN=pdf PE=4 SV=1
91 : DEF1_DAHME 0.53 0.65 3 51 2 50 49 0 0 50 P0C8Y4 Defensin-like protein 1 OS=Dahlia merckii PE=1 SV=1
92 : B9R7X8_RICCO 0.52 0.68 2 51 30 79 50 0 0 79 B9R7X8 Low-molecular-weight cysteine-rich protein LCR78, putative OS=Ricinus communis GN=RCOM_1595110 PE=4 SV=1
93 : DEF1_CLITE 0.52 0.66 2 51 1 49 50 1 1 49 Q7M1F2 Defensin-like protein 1 OS=Clitoria ternatea PE=1 SV=1
94 : W1NRH0_AMBTC 0.52 0.68 2 51 31 80 50 0 0 80 W1NRH0 Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00088p00131130 PE=4 SV=1
95 : D7KI40_ARALL 0.50 0.72 2 51 29 78 50 0 0 78 D7KI40 Low-molecular-weight cysteine-rich 78 OS=Arabidopsis lyrata subsp. lyrata GN=LCR78 PE=4 SV=1
96 : DEF19_ARATH 0.50 0.70 2 51 29 78 50 0 0 78 P82787 Defensin-like protein 19 OS=Arabidopsis thaliana GN=PDF1.4 PE=3 SV=2
97 : K4UF75_ARAHH 0.50 0.72 2 51 29 78 50 0 0 78 K4UF75 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1.4 PE=4 SV=1
98 : V4KAW5_THESL 0.50 0.70 2 51 29 78 50 0 0 78 V4KAW5 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10009242mg PE=4 SV=1
99 : DEF1_HEUSA 0.49 0.69 2 51 4 54 51 1 1 54 P0C8Y5 Defensin-like protein 1 OS=Heuchera sanguinea PE=1 SV=1
100 : I3SZ44_MEDTR 0.49 0.61 2 51 30 79 51 2 2 136 I3SZ44 Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
101 : M1AFY2_SOLTU 0.48 0.71 2 51 27 75 52 3 5 78 M1AFY2 Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400008516 PE=4 SV=1
102 : M4DJ23_BRARP 0.48 0.70 2 51 29 78 50 0 0 78 M4DJ23 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA016501 PE=4 SV=1
103 : M5Y4P8_PRUPE 0.48 0.66 2 51 35 84 50 0 0 84 M5Y4P8 Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb024748mg PE=4 SV=1
104 : R0IJN5_9BRAS 0.48 0.70 2 51 29 78 50 0 0 78 R0IJN5 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10010796mg PE=4 SV=1
105 : T1SQP6_BRANA 0.48 0.70 2 51 29 78 50 0 0 78 T1SQP6 Defensin OS=Brassica napus GN=def5 PE=4 SV=1
106 : G7L967_MEDTR 0.47 0.57 3 51 30 76 49 2 2 76 G7L967 Defensin-like protein OS=Medicago truncatula GN=MTR_8g023090 PE=4 SV=1
107 : K4CC45_SOLLC 0.47 0.59 2 51 27 76 51 2 2 76 K4CC45 Uncharacterized protein OS=Solanum lycopersicum GN=Solyc07g009260.2 PE=4 SV=1
108 : Q8LSM8_HELAN 0.47 0.65 3 51 30 78 51 2 4 108 Q8LSM8 Defensin OS=Helianthus annuus PE=4 SV=1
109 : K7MPK0_SOYBN 0.46 0.62 3 51 38 86 50 2 2 86 K7MPK0 Uncharacterized protein OS=Glycine max PE=4 SV=1
110 : Q19JA1_TRIKI 0.46 0.64 2 51 30 76 50 2 3 76 Q19JA1 Defensin (Precursor) OS=Trichosanthes kirilowii PE=4 SV=1
111 : ALL1_ARTVU 0.45 0.66 2 51 28 77 53 3 6 132 Q84ZX5 Major pollen allergen Art v 1 OS=Artemisia vulgaris PE=1 SV=1
112 : V4UBB7_9ROSI 0.45 0.61 2 51 29 78 51 2 2 78 V4UBB7 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030125mg PE=4 SV=1
113 : D3HU71_AMBAR 0.44 0.63 2 51 21 72 54 4 6 164 D3HU71 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
114 : D4IHC0_AMBAR 0.44 0.63 2 51 21 72 54 4 6 164 D4IHC0 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
115 : D4IIH0_AMBAR 0.44 0.63 2 51 21 72 54 4 6 111 D4IIH0 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=4 SV=1
116 : D4IIH1_AMBAR 0.44 0.63 2 51 1 52 54 4 6 140 D4IIH1 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
117 : D4IIH2_AMBAR 0.44 0.63 2 51 1 52 54 4 6 134 D4IIH2 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
118 : D4IIH3_AMBAR 0.44 0.63 2 51 1 52 54 4 6 91 D4IIH3 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
119 : D4IIH5_AMBAR 0.44 0.63 2 51 21 72 54 4 6 110 D4IIH5 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=4 SV=1
120 : D4IIH6_AMBAR 0.44 0.63 2 51 21 72 54 4 6 116 D4IIH6 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=4 SV=1
121 : SF18_HELAN 0.44 0.65 2 51 16 65 52 2 4 161 P22357 Anther-specific protein SF18 (Fragment) OS=Helianthus annuus PE=2 SV=1
122 : V4S800_9ROSI 0.44 0.54 2 51 33 82 52 2 4 82 V4S800 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029712mg PE=4 SV=1
123 : D3HU70_AMBAR 0.43 0.61 2 51 21 72 54 4 6 147 D3HU70 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
124 : D4IIH4_AMBAR 0.43 0.62 2 51 1 51 53 3 5 96 D4IIH4 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
125 : D4IIH8_AMBAR 0.43 0.61 2 51 1 52 54 4 6 127 D4IIH8 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
126 : D4IIH9_AMBAR 0.43 0.61 2 51 21 72 54 4 6 137 D4IIH9 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
127 : D4III0_AMBAR 0.42 0.63 2 51 1 50 52 2 4 140 D4III0 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
128 : D4III1_AMBAR 0.42 0.63 2 51 1 50 52 2 4 140 D4III1 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
129 : D4III2_AMBAR 0.42 0.63 2 51 1 50 52 2 4 133 D4III2 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
130 : D4III3_AMBAR 0.42 0.63 2 51 1 50 52 2 4 124 D4III3 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
131 : D4III4_AMBAR 0.42 0.63 2 51 1 50 52 2 4 124 D4III4 Ragweed homologue of Art v 1 (Fragment) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
132 : D7KC44_ARALL 0.42 0.66 2 51 31 80 53 2 6 80 D7KC44 Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_892869 PE=4 SV=1
133 : D7KQ30_ARALL 0.42 0.68 3 51 31 80 50 1 1 80 D7KQ30 Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_682811 PE=4 SV=1
134 : DEF18_ARATH 0.42 0.68 3 51 31 80 50 1 1 80 Q9FZ31 Defensin-like protein 18 OS=Arabidopsis thaliana GN=PDF1.5 PE=2 SV=1
135 : I0J3A6_ARAHH 0.42 0.68 3 51 31 80 50 1 1 80 I0J3A6 Defensin OS=Arabidopsis halleri subsp. halleri GN=PDF1-5 PE=4 SV=1
136 : D3HU72_AMBAR 0.41 0.59 2 51 21 72 54 4 6 147 D3HU72 Ragweed homologue of Art v 1 (Precursor) OS=Ambrosia artemisiifolia GN=rha1 PE=2 SV=1
137 : D7MGC4_ARALL 0.40 0.62 3 51 31 79 52 2 6 79 D7MGC4 Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_656054 PE=4 SV=1
138 : G7IZ20_MEDTR 0.40 0.60 2 51 30 77 50 2 2 77 G7IZ20 Defensin-like protein OS=Medicago truncatula GN=MTR_3g020340 PE=4 SV=1
139 : M4ER89_BRARP 0.40 0.65 3 51 31 79 52 2 6 79 M4ER89 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA031312 PE=4 SV=1
140 : V4N136_THESL 0.40 0.63 3 51 30 78 52 2 6 78 V4N136 Uncharacterized protein OS=Thellungiella salsuginea GN=EUTSA_v10029442mg PE=4 SV=1
141 : R0GU19_9BRAS 0.38 0.65 3 51 31 79 52 2 6 79 R0GU19 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10007345mg PE=4 SV=1
142 : V4SHQ2_9ROSI 0.38 0.66 2 51 33 82 50 0 0 82 V4SHQ2 Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029711mg PE=4 SV=1
143 : DEF1_PINSY 0.37 0.50 2 51 34 82 52 3 5 83 A4L7R7 Defensin-1 OS=Pinus sylvestris GN=Def1 PE=1 SV=1
144 : M4CL14_BRARP 0.37 0.67 2 51 31 80 51 2 2 80 M4CL14 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA004900 PE=4 SV=1
145 : M4E9E0_BRARP 0.37 0.65 2 51 31 80 51 2 2 80 M4E9E0 Uncharacterized protein OS=Brassica rapa subsp. pekinensis GN=BRA025396 PE=4 SV=1
146 : R0GFY0_9BRAS 0.37 0.67 2 51 30 80 51 1 1 80 R0GFY0 Uncharacterized protein OS=Capsella rubella GN=CARUB_v10022097mg PE=4 SV=1
147 : M5VTY8_PRUPE 0.36 0.55 3 49 11 66 56 1 9 70 M5VTY8 Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa021404mg PE=4 SV=1
## ALIGNMENTS 1 - 70
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A X 0 0 150 0 0
2 2 A K + 0 0 138 130 18 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK RKKKKKKRKRRKK KR KKKKKKKK
3 3 A L - 0 0 25 145 34 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL LLLLLFLLFLLLL LLLLLLLLLLL
4 4 A a E -A 49 0A 49 145 2 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCC CCCCCCCCCCC
5 5 A E E +A 48 0A 103 147 41 EEEEEEEEEQEEEEEEQQEEEEEQEEEEEEEEEEKEEEEQEEEEEEEEEEEEEEEEEE EEEEEEEEEEE
6 6 A R E -A 47 0A 104 147 31 RRRRRRRRRRRRRRRRRRRRRRRKRRRRKKRRRRRRRRRRRRRKRKKKKRKKKKKKRR RKKKRRRRRKR
7 7 A P E S-A 46 0A 51 147 68 PPPPPPPPPPPPPPPPPPAPAPPPPSSSPPSSSPGSSSSPSPPPSPPPPSPPPPPPSS SPPSSSSSPSS
8 8 A S - 0 0 0 147 6 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSS
9 9 A G S S+ 0 0 40 147 78 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGG GGGGGGGGGGG
10 10 A T S S+ 0 0 65 147 18 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT TTTTTTTTTTT
11 11 A W + 0 0 74 147 12 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW WWWWWWWWWWW
12 12 A S + 0 0 70 147 32 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS SSSSSSSSSSS
13 13 A G S S- 0 0 28 146 1 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
14 14 A V - 0 0 106 148 83 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVV
15 15 A b - 0 0 14 148 4 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
16 16 A G S S+ 0 0 68 148 71 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
17 17 A N > - 0 0 80 148 46 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
18 18 A N H > S+ 0 0 71 147 64 NNNNNNNNNNNSNNNNNNNNNSNNNNNNSSNNNNNNNNNNNNNSNSSSSNSSNSSNNNSNSSNNNNNNNN
19 19 A N H > S+ 0 0 103 148 66 NNNNNNNNNNNNNNNNNNNNNNKNNNNNGNNNNGNNNNNNNNNNNNNNNNNNGNGGNNNNNNNNNNNDNN
20 20 A A H > S+ 0 0 30 148 75 AAAAAAAAAAAAAAAAAAAAASAAGAAAAAAAAAAAAAAQAAAAAAAAAAAAAAAAAAAAAAAAAAAKAT
21 21 A c H X S+ 0 0 0 148 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A K H X S+ 0 0 67 148 62 KKKKKKKKKKKKRKKKRKKKKKKKKKKKKKKKKRKKKKKKKKKKKKKKKKKKRKKRKKKKKKKKKKKKKK
23 23 A N H X S+ 0 0 74 148 61 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSSNNNNNNNNNNNNNNNNNNNNNNNNSHN
24 24 A Q H X S+ 0 0 39 148 43 QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQQQQQQ
25 25 A d H X S+ 0 0 0 148 2 CCCCCCCCCCCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCRCCCCCCCCCCCCC
26 26 A I H < S+ 0 0 61 148 54 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIQQIIIIIIIIIIIIIIIIIIIIIIIIIII
27 27 A N H < S+ 0 0 102 148 67 NNNNNNNNNNRNNRRRNRRRRNRNRRRNNNRRNRRRNRNNNRRNRNNNNNNNRNNRNNNNNNNNNNNRNN
28 28 A L H < S+ 0 0 105 148 69 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL
29 29 A E S < S- 0 0 35 148 6 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE
30 30 A K + 0 0 128 147 70 KKKKKKKKKKKKKKKKKKKKKGGGKGGGGGGGGRKGGGGKGGGGGGGGGGGGKGGKGGGGGGGGGGGGGG
31 31 A A - 0 0 5 148 10 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
32 32 A R S S- 0 0 127 148 64 RRRRRRRRRRRRRRRRRRRRRRRRRQQRRKQQRRRQRQRRRRRRQRKKKRKKRKRRRRRRRKRKKKKRRR
33 33 A H - 0 0 89 148 39 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
34 34 A G E +B 47 0A 1 148 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGG
35 35 A S E -B 46 0A 38 146 57 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
36 36 A b E -B 45 0A 13 147 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A N E -B 44 0A 65 148 54 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNDNNNNNNNNN
38 38 A Y + 0 0 115 148 95 YYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYYY
39 39 A V - 0 0 95 116 82 VVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVVIVVVVVVVRVRVVIRRRRVIR
40 40 A F S S+ 0 0 171 117 21 FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFF
41 41 A P S S- 0 0 85 142 50 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP
42 42 A A S S- 0 0 45 148 89 AAAAAAAAAAAAAAAAAAAAAAAAAAAYAAAAYAAAYAYYYAAAAAAAAYAAAAAAYYAYAAYYYYYAYY
43 43 A H - 0 0 90 142 80 HHHHHHHHHHHHHHHHHHHRHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
44 44 A K E - B 0 37A 40 147 77 KKKKKKKKKKKKKKKKKKKKKKKKKKKRKKKKRKKKRKRRRKKKKKKKKRKKKKKKRRKRKKRRRRR RR
45 45 A c E - B 0 36A 0 142 0 C CCCCCCCCCCC CCCCCCCCCC CCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCC CCCCCC CC
46 46 A I E -AB 7 35A 18 142 38 I IIIIIIIIIII IIIIIIIIII IIIIIIIIIIIIIIIIIIII IIIIIIIIIIIIII IIIIII II
47 47 A d E -AB 6 34A 0 142 0 C CCCCCCCCCCC CCCCCCCCCC CCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCC CCCCCC CC
48 48 A Y E -A 5 0A 60 142 7 Y YYYYYYYYYYY YYYYYYYYYY YYYYYYYYYYYYYYYYYYYY YYYYYYYYYYYYYY YYYYYY YY
49 49 A F E -A 4 0A 54 142 21 F FFFFFFFFFFF FFFFFFFFFF FFFFFFFFFFFFFFFFFFVF VVVFFVFFFFFFVF VFFFFF FV
50 50 A P 0 0 68 140 69 P PPPPPPPPPPP PPPPPPPPPP PPPPPPPPPPPPPPPPPPPP PPPPPPPPPPPPPD PPPPPP PP
51 51 A a 0 0 84 140 0 C CCCCCCCCCCC CCCCCCCCCC CCCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCC CCCCCC CC
## ALIGNMENTS 71 - 140
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....8....:....9....:....0....:....1....:....2....:....3....:....4
1 1 A X 0 0 150 0 0
2 2 A K + 0 0 138 130 18 KKKKKKKRKKRKKK KK Q KNKRRRRKKKRRRR K RKKKKKKKKKKKKKKKKKKKKKK K K
3 3 A L - 0 0 25 145 34 LLFFLWLLYFFYLLL RVLLLVLVIIIVLLLVIIVLVLLTLVLLLLLLLLIVLLLLIIIIIVLLLLVIVV
4 4 A a E -A 49 0A 49 145 2 CCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
5 5 A E E +A 48 0A 103 147 41 ETEEQEEAEEEERRKeeQnEEQEQEEEEDQRQQQQGQEAQEQEEEEEEEEEQEEEEEEEEEKKKKEQDQQ
6 6 A R E -A 47 0A 104 147 31 KRRRKKRRRKKRKKRtrRrRKRRKRRRRVKRRRRRRRKKRKRKKKKKKKKKRKKKKKKKKKRRRRKRSRR
7 7 A P E S-A 46 0A 51 147 68 PHSSPPLPSPPSPPENNPPAARAKRRRRPRPRRRRKRARATRPPPPPPPPPRQPQQPPPPPYEEEQYPYY
8 8 A S - 0 0 0 147 6 SSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
9 9 A G S S+ 0 0 40 147 78 GGGGGGGGGGGGGGTGSKQQKKLQKKKKGTGKKKKRKQKQKKLVLLVVVVKKLVLLLLLLLDEEELGRGG
10 10 A T S S+ 0 0 65 147 18 TTTTTTTTTTTTTTHGTTTTTTTTTTTTTTLTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTSTTTTSTSS
11 11 A W + 0 0 74 147 12 WWWWWWTWWWWWWWWSSWWWWWWWWWWWWWVWWWWLWWWWYWWWWWWWWWWWWWWWWWWWWSWWWWWWWW
12 12 A S + 0 0 70 147 32 SSSSYSLsSSSSSSVtfSSSSSTSTTTTSSSTSTTSSSSKSSSSSSSSSSFSSSSSSSSSSSSSSSESSK
13 13 A G S S- 0 0 28 146 1 GGGGGGGgGGGGGGGvgGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
14 14 A V - 0 0 106 148 83 VVVVFVVNVVVVLLVVVFNDNFNEFFFFHPLFFFFRPTWVKLKKKKKKKKNPKNKKEENNNVRRRKVPIF
15 15 A b - 0 0 14 148 4 CCCCCCCCCCCCCCCRCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCKCCCCCCCCCCCCCCCC
16 16 A G S S+ 0 0 68 148 71 GGGGGGGRGGGGAADEQGGKGGGGGGGGGLFGGGGTIGGFDLkkkkkkkkKLkVkkEEEEEIVVVkIILF
17 17 A N > - 0 0 80 148 46 NNNNNSNNNNNNNNSAYSNNNSNNNNNNSNnNNNNSNKSRNNkkkkkkkkDNkkkkDDDDDLNNNkFRSS
18 18 A N H > S+ 0 0 71 147 64 NNNNSNSNSSSTSSNNDSTTTTTTTTTTSTdTTTTNTTSN.TttttttttTTttttTTTTTSDDDtSDST
19 19 A N H > S+ 0 0 103 148 66 DDGGNDNNGGGDDDNNNKAKGKGNRRRRSGDRGRRSGKNEKGDDDDDDDDDGDDDDDDDDDSYYYDSSSS
20 20 A A H > S+ 0 0 30 148 75 AAAATAAAKAAKAAIAANHNHNHHGGGGKNDGNGGDNHNKKNKKKKKKKKKKKKKKKKKKKRQQQKNVNN
21 21 A c H X S+ 0 0 0 148 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
22 22 A K H X S+ 0 0 67 148 62 KKRRKKKRSKKSRRKKMDDDDDDKDDDDSKKDNDDSSDDRDSDDDDDDDDDSDDDDDDDDDNRRRDNNNN
23 23 A N H X S+ 0 0 74 148 61 NNNNNSNNNDDSKKNNNRKNNRTTSSSSQRSSRSSTRDKNKRKKKKKKKKKRKKKKKKKKKSDDDKTTTN
24 24 A Q H X S+ 0 0 39 148 43 QQQQQQRFQQQQQQTQQQQQQQQQQQQQQQHQQQQKQQQNKQRRRRRRRRRQRRRRKKKKKRHHHRQTQQ
25 25 A d H X S+ 0 0 0 148 2 CCCCCCCCCCCCCCCYCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
26 26 A I H < S+ 0 0 61 148 54 IIIIIIIIQIIQIIVIIKQIKKRQKKKKKIVKRKKIKKRLIKIIIIIIIIIKIIIISSNNNIIIIIIIII
27 27 A N H < S+ 0 0 102 148 67 NRNNNRLKRRRRRRRNNNDQSNNKSRSRDNNRNRRKQSTREQEEEEEEEEDQEEEEDDDDDNNNNEEDEE
28 28 A L H < S+ 0 0 105 148 69 LLLLLLLLLLLLLLLLLWWWWWWYWWWWRVRWWWWWQWKEWQWWWWWWWWWQWWWWWWWWWTNNNWRARR
29 29 A E S < S- 0 0 35 148 6 EEEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEKEEEEEEEEEEEEEEEEEEEEEEDDDEEEEE
30 30 A K + 0 0 128 147 70 GGRRGGGKGGGGKKKGGGKKGGSDRRRRHHNRGRRYDGG.KDGGGGGGGGGYGGGGGGGGGKRRRGSYHN
31 31 A A - 0 0 5 148 10 AAAAAAASAAAAAAAAAAAAAAAAAAAAFAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAASAA
32 32 A R S S- 0 0 127 148 64 KRHHRQRRAKKARRQKQKSRALKRSSSSATHSLSSTRATRQRKKKKKKKKKRKKKKKKKKKKNNNKKNKK
33 33 A H - 0 0 89 148 39 HHHHHHHHHHHHDDHHDHHHHHHFHHHHYFTHRHHYFHHTHFHHHHHHHHHYHHHHHHHHHFDDDHYYYY
34 34 A G E +B 47 0A 1 148 3 GGGGGGGGGGGGGGGGGGGGGGGGGGGGgGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
35 35 A S E -B 46 0A 38 146 57 SSSSSSSSSSSSSSSSKAAAAAAAAAAAaAAAAAASAAA.AAAAAAAAAAAAAAAAAAAAAAYYYAAAAA
36 36 A b E -B 45 0A 13 147 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A N E -B 44 0A 65 148 54 NNNNNNNNNNNNKKKNNHHHHHHHHHHHHHDHHHHGHHHNHHHHHHHHHHHYHHHHHHHHHHAAAHHGHH
38 38 A Y + 0 0 115 148 95 YYYYYYFIYYYYYYYYNAKKVAKSAAAAYrGAAAAGrVgCKrKKKKKKKKQRKKKKVVVVVVGGGKRGSA
39 39 A V - 0 0 95 116 82 VVRRVVIPVKKVEEVVAKR.RQRQQQQQQg.QQQQ.g.iK.g....................GGG.....
40 40 A F S S+ 0 0 171 117 21 FFFFFFFFFPLFFFFFVFE.NF.GFFFFFF.FSFFFF.LY.I....................YYY..Y..
41 41 A P S S- 0 0 85 142 50 PPPPPPPPPPPPPPPPPPNRGPGFPPPPPG.PPPPYGRKVRGRRRRRRRRRQRRRRRRRRR.PPPR.G..
42 42 A A S S- 0 0 45 148 89 YYYYYAYSAAAAAAAATGHgKGNGGGGGSFlGGGGIFdRFeFddddddddegddddeeeeedwwwddFdd
43 43 A H - 0 0 90 142 80 HHHHHHHNHHHHHHYHPVWwHVWHFFFFV.rFFFF..h.Re.aaaaaaaahyaaaaspppprrrral.lv
44 44 A K E - B 0 37A 40 147 77 RRRRRMRKKRRKKKKKKAKMMAKAAAAAKARAAAADAMAASATTTTSSSSMAMSMMMMMMMAGSGMADAA
45 45 A c E - B 0 36A 0 142 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
46 46 A I E -AB 7 35A 18 142 38 VVIIIYVIIIIIFFIIIFFFFFFFFFFFFFIFFFFIFFDIFFFFFFFFFFFYFFFFFFFFFFFFFFFIFF
47 47 A d E -AB 6 34A 0 142 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
48 48 A Y E -A 5 0A 60 142 7 YYYYYYYYYYYYYYYYYYYYYYYYYYYYKYYYYYYFYYYYYYYYYYYYYYYYYYYYYYYYYYFFFYYFYY
49 49 A F E -A 4 0A 54 142 21 VFFFVYFFYYYYYYFVFFFFFFFFFFFFRKFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFSFFFF
50 50 A P 0 0 68 140 69 PPPPPPPPPEEPPPPPPNN NKNTNNNNQKKNRNNNKNKPDKDDDDDDDDDNDDDDDDDDDNSSSDDKDD
51 51 A a 0 0 84 140 0 CCCCCCCCCCCCCCCCCCC CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
## ALIGNMENTS 141 - 147
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....5....:....6....:....7....:....8....:....9....:....0....:....1
1 1 A X 0 0 150 0 0
2 2 A K + 0 0 138 130 18 KRRKQ
3 3 A L - 0 0 25 145 34 VQMSSLL
4 4 A a E -A 49 0A 49 145 2 CCCCCCE
5 5 A E E +A 48 0A 103 147 41 QSKkkSS
6 6 A R E -A 47 0A 104 147 31 RKTqkRK
7 7 A P E S-A 46 0A 51 147 68 YRPPPKR
8 8 A S - 0 0 0 147 6 SASNKSS
9 9 A G S S+ 0 0 40 147 78 GQGSAEK
10 10 A T S S+ 0 0 65 147 18 SKKGGTT
11 11 A W + 0 0 74 147 12 WWFSRWW
12 12 A S + 0 0 70 147 32 TTKKRSS
13 13 A G S S- 0 0 28 146 1 GGG..GG
14 14 A V - 0 0 106 148 83 IPYNFRV
15 15 A b - 0 0 14 148 4 CCCCCCC
16 16 A G S S+ 0 0 68 148 71 MIVMKTV
17 17 A N > - 0 0 80 148 46 SKNKRNK
18 18 A N H > S+ 0 0 71 147 64 TTNDDDS
19 19 A N H > S+ 0 0 103 148 66 SGTSAYK
20 20 A A H > S+ 0 0 30 148 75 NSNEIQN
21 21 A c H X S+ 0 0 0 148 0 CCCCCCC
22 22 A K H X S+ 0 0 67 148 62 NRKRQRD
23 23 A N H X S+ 0 0 74 148 61 TNNNKDK
24 24 A Q H X S+ 0 0 39 148 43 QHVVTHQ
25 25 A d H X S+ 0 0 0 148 2 CCCCCCC
26 26 A I H < S+ 0 0 61 148 54 IRRIVVK
27 27 A N H < S+ 0 0 102 148 67 EKTYENT
28 28 A L H < S+ 0 0 105 148 69 RREAINW
29 29 A E S < S- 0 0 35 148 6 EEGEEDE
30 30 A K + 0 0 128 147 70 SGFKKRR
31 31 A A - 0 0 5 148 10 AAPAAGA
32 32 A R S S- 0 0 127 148 64 KVTMIVK
33 33 A H - 0 0 89 148 39 YDGRRNH
34 34 A G E +B 47 0A 1 148 3 GGSAGGG
35 35 A S E -B 46 0A 38 146 57 AA.TTYA
36 36 A b E -B 45 0A 13 147 0 CCCCCCC
37 37 A N E -B 44 0A 65 148 54 HHDDDAH
38 38 A Y + 0 0 115 148 95 FYFYYGA
39 39 A V - 0 0 95 116 82 .D.TKGT
40 40 A F S S+ 0 0 171 117 21 .F.FFYY
41 41 A P S S- 0 0 85 142 50 .PHPPPR
42 42 A A S S- 0 0 45 148 89 dGvRWwn
43 43 A H - 0 0 90 142 80 sFrRTrf
44 44 A K E - B 0 37A 40 147 77 AAKRQAA
45 45 A c E - B 0 36A 0 142 0 CCCCCCC
46 46 A I E -AB 7 35A 18 142 38 FFYFFFF
47 47 A d E -AB 6 34A 0 142 0 CCCCCCC
48 48 A Y E -A 5 0A 60 142 7 YYYHHFY
49 49 A F E -A 4 0A 54 142 21 FYKFFYF
50 50 A P 0 0 68 140 69 DNPPPT
51 51 A a 0 0 84 140 0 CCCCCC
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 14 84 2 0 1 0 130 0 0 0.523 17 0.82
3 3 A 10 72 8 1 4 1 1 0 0 0 1 1 0 0 1 0 1 0 0 0 145 0 0 1.092 36 0.66
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 0 0 0 1 0 0 145 0 0 0.041 1 0.97
5 5 A 0 0 0 0 0 0 0 1 1 0 2 1 0 0 2 6 15 70 1 1 147 0 5 1.082 36 0.59
6 6 A 1 0 0 0 0 0 0 0 0 0 1 1 0 0 61 36 1 0 0 0 147 0 0 0.832 27 0.69
7 7 A 0 1 0 0 0 0 3 1 5 51 18 1 0 1 11 2 3 3 1 0 147 0 0 1.626 54 0.31
8 8 A 0 0 0 0 0 0 0 0 1 0 97 0 0 0 0 1 0 0 1 0 147 0 0 0.153 5 0.93
9 9 A 4 9 0 0 0 0 0 62 1 0 1 1 0 0 2 12 4 3 0 1 147 0 0 1.392 46 0.22
10 10 A 0 1 0 0 0 0 0 2 0 0 3 92 0 1 0 1 0 0 0 0 147 0 0 0.399 13 0.81
11 11 A 1 1 0 0 1 93 1 0 0 0 3 1 0 0 1 0 0 0 0 0 147 0 0 0.367 12 0.87
12 12 A 1 1 0 0 1 0 1 0 0 0 85 7 0 0 1 3 0 1 0 0 147 2 3 0.658 21 0.68
13 13 A 1 0 0 0 0 0 0 99 0 0 0 0 0 0 0 0 0 0 0 0 146 0 0 0.041 1 0.99
14 14 A 59 3 1 0 9 1 1 0 0 3 0 1 0 1 3 9 0 2 7 1 148 0 0 1.551 51 0.16
15 15 A 0 0 0 0 0 0 0 0 0 0 0 0 99 0 1 1 0 0 0 0 148 0 0 0.081 2 0.96
16 16 A 4 3 3 1 2 0 0 67 1 0 0 1 0 0 1 10 1 4 0 1 148 0 12 1.352 45 0.29
17 17 A 0 1 0 0 1 0 1 0 1 0 7 0 0 0 2 11 0 0 73 4 148 1 14 1.005 33 0.53
18 18 A 0 0 0 0 0 0 0 0 0 0 20 29 0 0 0 0 0 0 45 6 147 0 0 1.213 40 0.35
19 19 A 0 0 0 0 0 0 3 12 1 0 6 1 0 0 5 5 0 1 49 18 148 0 0 1.599 53 0.34
20 20 A 1 0 1 0 0 0 0 5 53 0 1 1 0 3 1 18 3 1 9 1 148 0 0 1.584 52 0.24
21 21 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 148 0 0 0.000 0 1.00
22 22 A 0 0 0 1 0 0 0 0 0 0 5 0 0 0 11 53 1 0 5 24 148 0 0 1.284 42 0.38
23 23 A 0 0 0 0 0 0 0 0 0 0 9 5 0 1 5 18 1 0 57 5 148 0 0 1.348 44 0.38
24 24 A 1 0 0 0 1 0 0 0 0 0 0 2 0 4 11 5 75 0 1 0 148 0 0 0.949 31 0.56
25 25 A 0 0 0 0 0 0 1 1 0 0 0 0 98 0 1 0 0 0 0 0 148 0 0 0.121 4 0.97
26 26 A 3 1 75 0 0 0 0 0 0 0 1 0 0 0 3 11 4 0 2 0 148 0 0 0.969 32 0.45
27 27 A 0 1 0 0 0 0 1 0 0 0 3 2 0 0 26 3 3 13 43 6 148 0 0 1.587 52 0.33
28 28 A 1 59 1 0 0 25 1 0 1 0 0 1 0 0 5 1 2 1 3 0 148 0 0 1.262 42 0.30
29 29 A 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 95 0 3 148 1 0 0.228 7 0.94
30 30 A 0 0 0 0 1 0 2 54 0 0 2 0 0 2 10 25 0 0 1 2 147 0 0 1.321 44 0.29
31 31 A 0 0 0 0 1 0 0 3 95 1 1 0 0 0 0 0 0 0 0 0 148 0 0 0.276 9 0.89
32 32 A 1 1 1 1 0 0 0 0 3 0 5 3 0 2 43 29 7 0 3 0 148 0 0 1.645 54 0.35
33 33 A 0 0 0 0 3 0 5 1 0 0 0 1 0 82 2 0 0 0 1 5 148 0 0 0.786 26 0.60
34 34 A 0 0 0 0 0 0 0 98 1 0 1 0 0 0 0 0 0 1 0 0 148 2 1 0.121 4 0.97
35 35 A 0 0 0 0 0 0 3 0 35 0 60 1 0 0 0 1 0 0 0 0 146 0 0 0.864 28 0.42
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 147 0 0 0.000 0 1.00
37 37 A 0 0 0 0 0 0 1 1 3 0 0 0 0 32 0 2 0 0 57 3 148 0 0 1.067 35 0.45
38 38 A 5 0 1 0 2 0 60 5 8 0 1 0 1 0 3 11 1 0 1 0 148 32 4 1.460 48 0.05
39 39 A 59 0 4 0 0 0 0 6 1 1 0 2 0 0 10 4 9 2 0 1 116 1 0 1.471 49 0.18
40 40 A 1 2 1 0 86 0 6 1 0 1 1 0 0 0 0 0 0 1 1 0 117 0 0 0.650 21 0.78
41 41 A 1 0 0 0 1 0 1 4 0 75 0 0 0 1 16 1 1 0 1 0 142 0 0 0.891 29 0.50
42 42 A 1 1 1 0 3 3 16 9 43 0 1 1 0 1 1 1 0 5 1 13 148 6 35 1.890 63 0.11
43 43 A 3 1 0 0 7 2 1 0 9 4 1 1 0 62 7 0 0 1 1 0 142 0 0 1.474 49 0.20
44 44 A 0 0 0 10 0 0 0 1 17 0 5 3 0 0 18 44 1 0 0 1 147 0 0 1.591 53 0.23
45 45 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 142 0 0 0.000 0 1.00
46 46 A 2 0 56 0 39 0 2 0 0 0 0 0 0 0 0 0 0 0 0 1 142 0 0 0.889 29 0.62
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 142 0 0 0.000 0 1.00
48 48 A 0 0 0 0 4 0 94 0 0 0 0 0 0 1 0 1 0 0 0 0 142 0 0 0.290 9 0.93
49 49 A 8 0 0 0 83 0 6 0 0 0 1 0 0 0 1 1 0 0 0 0 142 0 0 0.657 21 0.78
50 50 A 0 0 0 0 0 0 0 0 0 59 2 1 0 0 1 5 1 1 11 18 140 0 0 1.290 43 0.30
51 51 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 140 0 0 0.000 0 1.00
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
78 12 13 1 sSg
86 2 24 1 eSt
86 9 32 1 tKv
87 5 27 1 eKr
87 12 35 1 fSg
89 4 4 1 nEr
90 40 81 2 gGKw
99 34 37 1 gGa
100 38 67 1 rQg
101 17 43 1 nTd
101 39 66 1 lLr
107 38 64 1 rSg
108 39 68 2 dGKh
109 37 74 1 gNi
111 39 66 3 eAGKe
112 38 66 1 rQg
113 16 36 1 kVk
113 17 38 1 kQt
113 40 62 2 dSKa
114 16 36 1 kVk
114 17 38 1 kQt
114 40 62 2 dSKa
115 16 36 1 kVk
115 17 38 1 kQt
115 40 62 2 dSKa
116 16 16 1 kVk
116 17 18 1 kQt
116 40 42 2 dSKa
117 16 16 1 kVk
117 17 18 1 kQt
117 40 42 2 dSKa
118 16 16 1 kVk
118 17 18 1 kQt
118 40 42 2 dSKa
119 16 36 1 kVk
119 17 38 1 kQt
119 40 62 2 dSKa
120 16 36 1 kVk
120 17 38 1 kQt
120 40 62 2 dSKa
121 40 55 2 eAKh
122 40 72 2 gAGy
123 16 36 1 kFk
123 17 38 1 kEt
123 40 62 2 dSKa
124 17 17 1 kQt
124 40 41 2 dSKa
125 16 16 1 kFk
125 17 18 1 kEt
125 40 42 2 dSKa
126 16 36 1 kFk
126 17 38 1 kEt
126 40 62 2 dSKa
127 40 40 2 eSKs
128 40 40 2 eSKp
129 40 40 2 eSKp
130 40 40 2 eSKp
131 40 40 2 eSKp
132 39 69 3 dTHGr
133 41 71 1 wYr
134 41 71 1 wYr
135 41 71 1 wYr
136 16 36 1 kFk
136 17 38 1 kEt
136 40 62 2 dSKa
137 38 68 3 dDNGl
139 38 68 3 dDNGl
140 38 67 3 dSNGv
141 38 68 3 dGNGs
143 39 72 2 vAGr
144 5 35 1 kRq
145 5 35 1 kRk
146 42 71 1 wYr
147 41 51 9 nVLGVKVFKGf
//