Complet list of 1aq5 hssp file
Complete list of 1aq5.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1AQ5
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-03-19
HEADER COILED-COIL 07-AUG-97 1AQ5
COMPND MOL_ID: 1; MOLECULE: CARTILAGE MATRIX PROTEIN; CHAIN: A, B, C; FRAGMEN
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: GALLUS GALLUS; ORGANISM_COMMON: CHICKE
AUTHOR S.A.DAMES,R.WILTSCHECK,R.A.KAMMERER,J.ENGEL,A.T.ALEXANDRESCU
DBREF 1AQ5 A 5 47 UNP P05099 MATN1_CHICK 451 493
DBREF 1AQ5 B 5 47 UNP P05099 MATN1_CHICK 451 493
DBREF 1AQ5 C 5 47 UNP P05099 MATN1_CHICK 451 493
SEQLENGTH 47
NCHAIN 3 chain(s) in 1AQ5 data set
KCHAIN 1 chain(s) used here ; chains(s) : A
NALIGN 63
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : MATN1_CHICK 1AQ5 0.98 1.00 4 47 450 493 44 0 0 493 P05099 Cartilage matrix protein OS=Gallus gallus GN=MATN1 PE=1 SV=2
2 : G1MPW2_MELGA 0.95 1.00 4 47 450 493 44 0 0 493 G1MPW2 Uncharacterized protein OS=Meleagris gallopavo GN=MATN1 PE=4 SV=2
3 : U3IMP9_ANAPL 0.91 0.95 5 47 842 884 43 0 0 884 U3IMP9 Uncharacterized protein (Fragment) OS=Anas platyrhynchos GN=MATN1 PE=4 SV=1
4 : F1NL92_CHICK 0.89 0.94 4 47 507 553 47 1 3 553 F1NL92 Cartilage matrix protein OS=Gallus gallus GN=MATN1 PE=4 SV=2
5 : K7G3U8_PELSI 0.79 0.93 5 47 449 491 43 0 0 491 K7G3U8 Uncharacterized protein OS=Pelodiscus sinensis GN=MATN1 PE=4 SV=1
6 : Q7ZVP3_DANRE 0.72 0.88 5 47 465 507 43 0 0 507 Q7ZVP3 Matn1 protein (Fragment) OS=Danio rerio GN=matn1 PE=2 SV=1
7 : A5WWJ4_DANRE 0.71 0.88 6 47 448 489 42 0 0 489 A5WWJ4 Uncharacterized protein OS=Danio rerio GN=matn1 PE=4 SV=1
8 : Q5BKH6_XENTR 0.71 0.90 5 46 447 488 42 0 0 490 Q5BKH6 MGC108367 protein OS=Xenopus tropicalis GN=matn1 PE=2 SV=1
9 : Q7SYT5_XENLA 0.71 0.90 5 46 447 488 42 0 0 490 Q7SYT5 MGC64509 protein OS=Xenopus laevis GN=matn1 PE=2 SV=1
10 : E1BMV3_BOVIN 0.67 0.86 5 47 455 497 43 0 0 497 E1BMV3 Uncharacterized protein OS=Bos taurus GN=MATN1 PE=4 SV=2
11 : F7EHK3_XENTR 0.67 0.84 5 46 449 493 45 1 3 495 F7EHK3 Uncharacterized protein OS=Xenopus tropicalis GN=matn1 PE=4 SV=1
12 : G3TA97_LOXAF 0.65 0.84 5 47 456 498 43 0 0 498 G3TA97 Uncharacterized protein OS=Loxodonta africana GN=MATN1 PE=4 SV=1
13 : H0VG85_CAVPO 0.65 0.86 5 47 454 496 43 0 0 496 H0VG85 Uncharacterized protein OS=Cavia porcellus GN=LOC100714767 PE=4 SV=1
14 : F6QA22_ORNAN 0.63 0.88 5 47 196 238 43 0 0 238 F6QA22 Uncharacterized protein OS=Ornithorhynchus anatinus GN=LOC100087561 PE=4 SV=2
15 : G1NV11_MYOLU 0.63 0.84 5 47 453 495 43 0 0 495 G1NV11 Uncharacterized protein OS=Myotis lucifugus GN=MATN1 PE=4 SV=1
16 : I3L5Q7_PIG 0.61 0.84 5 47 453 496 44 1 1 496 I3L5Q7 Uncharacterized protein OS=Sus scrofa GN=MATN1 PE=4 SV=1
17 : A3KMG0_HUMAN 0.60 0.84 5 47 438 480 43 0 0 480 A3KMG0 MATN1 protein (Fragment) OS=Homo sapiens GN=MATN1 PE=2 SV=1
18 : B3KQU9_HUMAN 0.60 0.84 5 47 454 496 43 0 0 496 B3KQU9 cDNA PSEC0217 fis, clone HEMBA1004833, highly similar to CARTILAGE MATRIX PROTEIN OS=Homo sapiens PE=2 SV=1
19 : F7IAI8_CALJA 0.60 0.84 5 47 454 496 43 0 0 496 F7IAI8 Uncharacterized protein OS=Callithrix jacchus GN=MATN1 PE=4 SV=1
20 : G1QK56_NOMLE 0.60 0.84 5 47 454 496 43 0 0 496 G1QK56 Uncharacterized protein OS=Nomascus leucogenys GN=MATN1 PE=4 SV=1
21 : H2M6A9_ORYLA 0.60 0.79 6 47 329 370 42 0 0 370 H2M6A9 Uncharacterized protein OS=Oryzias latipes GN=LOC101155615 PE=4 SV=1
22 : H2N888_PONAB 0.60 0.84 5 47 418 460 43 0 0 460 H2N888 Uncharacterized protein OS=Pongo abelii GN=MATN1 PE=4 SV=1
23 : I3MNE7_SPETR 0.60 0.86 5 47 445 487 43 0 0 487 I3MNE7 Uncharacterized protein (Fragment) OS=Spermophilus tridecemlineatus GN=MATN1 PE=4 SV=1
24 : M3YVJ1_MUSPF 0.60 0.86 5 47 455 497 43 0 0 497 M3YVJ1 Uncharacterized protein OS=Mustela putorius furo GN=MATN1 PE=4 SV=1
25 : MATN1_HUMAN 0.60 0.84 5 47 454 496 43 0 0 496 P21941 Cartilage matrix protein OS=Homo sapiens GN=MATN1 PE=1 SV=1
26 : MATN1_MOUSE 0.60 0.84 5 47 458 500 43 0 0 500 P51942 Cartilage matrix protein OS=Mus musculus GN=Matn1 PE=2 SV=2
27 : Q5XI24_RAT 0.60 0.84 5 47 456 498 43 0 0 498 Q5XI24 Matrilin 1, cartilage matrix protein OS=Rattus norvegicus GN=Matn1 PE=2 SV=1
28 : F1Q1V7_CANFA 0.59 0.80 4 47 621 664 44 0 0 664 F1Q1V7 Uncharacterized protein (Fragment) OS=Canis familiaris GN=MATN1 PE=4 SV=2
29 : F7HUJ5_MACMU 0.58 0.81 5 47 453 495 43 0 0 495 F7HUJ5 Uncharacterized protein OS=Macaca mulatta GN=MATN1 PE=4 SV=1
30 : F7I867_CALJA 0.58 0.79 5 47 443 485 43 0 0 485 F7I867 Uncharacterized protein (Fragment) OS=Callithrix jacchus GN=MATN1 PE=4 SV=1
31 : G3QXU2_GORGO 0.58 0.81 5 47 454 496 43 0 0 496 G3QXU2 Uncharacterized protein OS=Gorilla gorilla gorilla GN=101135229 PE=4 SV=1
32 : H0XC95_OTOGA 0.58 0.76 4 46 458 502 45 1 2 503 H0XC95 Uncharacterized protein OS=Otolemur garnettii GN=MATN1 PE=4 SV=1
33 : H9F7T8_MACMU 0.58 0.81 5 47 117 159 43 0 0 159 H9F7T8 Cartilage matrix protein (Fragment) OS=Macaca mulatta GN=MATN1 PE=2 SV=1
34 : M3WXX2_FELCA 0.58 0.81 5 47 454 496 43 0 0 496 M3WXX2 Uncharacterized protein OS=Felis catus GN=MATN1 PE=4 SV=1
35 : G1MH01_AILME 0.57 0.82 5 47 453 496 44 1 1 496 G1MH01 Uncharacterized protein OS=Ailuropoda melanoleuca GN=MATN1 PE=4 SV=1
36 : H2U7F7_TAKRU 0.57 0.81 6 47 471 512 42 0 0 512 H2U7F7 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101070908 PE=4 SV=1
37 : G1SUK9_RABIT 0.56 0.84 5 47 438 480 43 0 0 480 G1SUK9 Uncharacterized protein (Fragment) OS=Oryctolagus cuniculus GN=MATN1 PE=4 SV=1
38 : H2U7F8_TAKRU 0.56 0.81 5 47 616 658 43 0 0 658 H2U7F8 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101070908 PE=4 SV=1
39 : G3NQG1_GASAC 0.55 0.83 6 47 475 516 42 0 0 516 G3NQG1 Uncharacterized protein (Fragment) OS=Gasterosteus aculeatus PE=4 SV=1
40 : F6XZF3_MONDO 0.54 0.66 5 45 455 487 41 1 8 488 F6XZF3 Uncharacterized protein OS=Monodelphis domestica GN=MATN1 PE=4 SV=2
41 : H9G4H3_ANOCA 0.53 0.81 4 46 453 495 43 0 0 503 H9G4H3 Uncharacterized protein (Fragment) OS=Anolis carolinensis GN=MATN1 PE=4 SV=1
42 : F6QY08_HORSE 0.51 0.79 5 47 452 493 43 1 1 493 F6QY08 Uncharacterized protein OS=Equus caballus GN=MATN1 PE=4 SV=1
43 : G7MI13_MACMU 0.50 0.70 5 47 445 494 50 1 7 494 G7MI13 Putative uncharacterized protein OS=Macaca mulatta GN=EGK_00477 PE=4 SV=1
44 : G7NWW0_MACFA 0.50 0.70 5 47 450 499 50 1 7 499 G7NWW0 Putative uncharacterized protein OS=Macaca fascicularis GN=EGM_00411 PE=4 SV=1
45 : M7BP63_CHEMY 0.50 0.66 4 47 642 672 44 1 13 672 M7BP63 Cartilage matrix protein OS=Chelonia mydas GN=UY3_12959 PE=4 SV=1
46 : B3DKJ1_DANRE 0.46 0.71 7 47 904 944 41 0 0 944 B3DKJ1 Matn4 protein OS=Danio rerio GN=matn4 PE=2 SV=1
47 : F1Q7C5_DANRE 0.46 0.71 7 47 658 698 41 0 0 698 F1Q7C5 Uncharacterized protein OS=Danio rerio GN=matn4 PE=4 SV=1
48 : F1R4G5_DANRE 0.46 0.71 7 47 617 657 41 0 0 657 F1R4G5 Uncharacterized protein OS=Danio rerio GN=matn4 PE=4 SV=1
49 : Q5CZQ6_DANRE 0.46 0.71 7 47 221 261 41 0 0 261 Q5CZQ6 Matn4 protein (Fragment) OS=Danio rerio GN=matn4 PE=2 SV=1
50 : Q5NJJ1_DANRE 0.46 0.71 7 47 604 644 41 0 0 644 Q5NJJ1 Matrilin-4 (Precursor) OS=Danio rerio GN=matn4 PE=2 SV=1
51 : Q5NJJ2_DANRE 0.46 0.71 7 47 645 685 41 0 0 685 Q5NJJ2 Matrilin-4 (Precursor) OS=Danio rerio GN=matn4 PE=2 SV=1
52 : Q5NJJ4_DANRE 0.46 0.68 7 47 686 726 41 0 0 726 Q5NJJ4 Matrilin-4 (Precursor) OS=Danio rerio GN=matn4 PE=2 SV=1
53 : Q5NJJ5_DANRE 0.46 0.71 7 47 904 944 41 0 0 944 Q5NJJ5 Matrilin-4 (Precursor) OS=Danio rerio GN=matn4 PE=2 SV=1
54 : Q6PYX2_DANRE 0.46 0.71 7 47 781 821 41 0 0 821 Q6PYX2 Matrilin-4-like protein OS=Danio rerio GN=matn4 PE=2 SV=1
55 : Q4KTW8_CEREL 0.44 0.69 8 46 33 71 39 0 0 75 Q4KTW8 Matrilin-4 (Fragment) OS=Cervus elaphus GN=Matn4 PE=2 SV=1
56 : S9YTJ3_9CETA 0.44 0.65 5 47 454 488 43 1 8 540 S9YTJ3 Cartilage matrix protein OS=Camelus ferus GN=CB1_000256001 PE=4 SV=1
57 : I3J1V3_ORENI 0.43 0.64 6 47 420 453 42 1 8 469 I3J1V3 Uncharacterized protein (Fragment) OS=Oreochromis niloticus GN=LOC100697941 PE=4 SV=1
58 : Q32NR2_XENLA 0.42 0.74 4 46 795 837 43 0 0 840 Q32NR2 MGC130922 protein OS=Xenopus laevis GN=matn2 PE=2 SV=1
59 : Q6P3N7_XENTR 0.42 0.70 4 46 794 836 43 0 0 839 Q6P3N7 Matrilin 2 OS=Xenopus tropicalis GN=matn2 PE=2 SV=1
60 : H2RM02_TAKRU 0.41 0.66 7 47 496 536 41 0 0 539 H2RM02 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101062369 PE=4 SV=1
61 : H2RM03_TAKRU 0.41 0.66 7 47 495 535 41 0 0 538 H2RM03 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101062369 PE=4 SV=1
62 : H2TQN0_TAKRU 0.41 0.66 5 45 785 828 44 1 3 832 H2TQN0 Uncharacterized protein (Fragment) OS=Takifugu rubripes GN=LOC101061411 PE=4 SV=1
63 : I3JFQ9_ORENI 0.41 0.61 3 46 423 466 44 0 0 469 I3JFQ9 Uncharacterized protein OS=Oreochromis niloticus PE=4 SV=1
## ALIGNMENTS 1 - 63
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 138 1 0
2 2 A S - 0 0 94 1 0
3 3 A H - 0 0 155 2 73 E
4 4 A M S S+ 0 0 174 11 31 VV I V V V V VA V
5 5 A E S S+ 0 0 195 47 26 EEEEEE EEEEEEEEEEEEE EEEEEEEEEEEEEE ED EEEEEE E TT DV
6 6 A E S S+ 0 0 155 52 1 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEEEEEE EEEE EE
7 7 A D - 0 0 76 63 11 DDDDDDDNNDNDDDDDDDDDKDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDSD
8 8 A P S S- 0 0 112 64 18 PPPPPPPPPPPPPPPPPPPPPPPPPPPLPPLPPPPPPPPPPPPPPPPPPPPPPPPPPQQPPMP
9 9 A a S S- 0 0 38 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
10 10 A E >> + 0 0 62 64 51 EEEEEEEEEAEAAAEAAAAAEAAAAAAAAAAAAAAEAEEAEAAAEAAAAAAAAAEAEKKAAQK
11 11 A b T 45S+ 0 0 28 64 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
12 12 A K T >5S+ 0 0 170 64 35 KKKKKNNEEEEEEDEEEEEEDEEEEEEEEEEEEEEDQDDEKEEEKEEEEEEEEEEEDKKEEEE
13 13 A S H >5S+ 0 0 48 64 26 SSSSASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSTSSASSSASSSSSSSSSSSSNNSSNA
14 14 A I H X5S+ 0 0 9 64 31 IIIIIIIIIIIIIVIILLLLLLIILIIILLLILLILILLIIILLILLLLLLLLLLLLIILLMR
15 15 A V H >X S+ 0 0 7 64 5 QQQQQQQQQQQQQRQQQQQQQQQQQEEQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
19 19 A T H 3X S+ 0 0 57 64 77 TTTTTKKTTTTAATASAAAAKAATAAATAAAAATTKAKKTTAAATQQQQQQQQQGTKINQQNK
20 20 A K H 3X S+ 0 0 113 64 64 KKKKKKKKKKKAKKKKKKKKKKKRKKKKKKKEKTKKTKKKKKKKKVVVVVVVVVRKKSSAAQQ
21 21 A V H S+ 0 0 118 60 35 KKKKKKKKKKKKKKKKKKKKKKKQKGKKKKKKKKKKKKK.CKKK.KKKKKKKKKA..QRSSSG
38 38 A R H X S+ 0 0 127 60 8 RRRRRRRKKRKRRRRRRRRRRRRRRRRRRRRRRRRRRRR.SRRR.RRRRRRRRRR..RRRRRR
39 39 A I H X S+ 0 0 4 60 18 IIIIIIILLLLLLLLLLLLLILLLLLLLLLLLLLLILII.LLLL.LLLLLLLLLL..LLLLLI
40 40 A E H X S+ 0 0 102 63 55 EEEEAAAAAAAAAAAAAAAAAATAAAAAAAAAAAAAAAAHEAAA.EEEEEEEEEEHHEEEEQE
41 41 A A H < S+ 0 0 34 63 67 AAAAAAAAAVAIIVVIIIIILIVVIVVVIIIIIVVLVLLIAIII.VVVVVVVVVDIIRQQQAR
42 42 A L H >X S+ 0 0 1 63 2 LLLLLLLLLLLLLLMLLLLLLLLLLLLLLLLLLLLLLLLLVLLL.LLLLLLLLLLLLLLLLLL
43 43 A E H 3X S+ 0 0 78 63 13 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEESTEEE.EEEEEEEEEESYEEEEEE
44 44 A N H 3< S+ 0 0 98 63 40 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGKNNN.KKKKKKKKKNQDKKNNSN
45 45 A K H <4 S+ 0 0 132 64 64 KKKKKKKKKRKRRKRRTTTTKTRRTRRRTTTRTRRKRKKQKRTTHQQQQQQQQQQRRRRQQKT
46 46 A I H < 0 0 22 62 35 IIIIIIIIIIIIIVIIVVVVIVVVVIVVVVVIVVVIIII LIVVILLLLLLSLLLTIMVLL V
47 47 A I < 0 0 191 53 31 IIIIIVV V IVIVVVVVVVVVVVIIVVVV VVVVVVV VVVLLLLLLLLLL LL LL
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
2 2 A 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 1 0 0 0.000 0 1.00
3 3 A 0 0 0 0 0 0 0 0 0 0 0 0 0 50 0 0 0 50 0 0 2 0 0 0.693 23 0.27
4 4 A 73 0 9 9 0 0 0 0 9 0 0 0 0 0 0 0 0 0 0 0 11 0 0 0.886 29 0.69
5 5 A 2 0 0 0 0 0 0 0 0 0 0 4 0 0 0 0 0 89 0 4 47 0 0 0.451 15 0.74
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 98 0 2 52 0 0 0.095 3 0.98
7 7 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 2 0 0 5 92 63 0 0 0.353 11 0.88
8 8 A 0 3 0 2 0 0 0 0 0 92 0 0 0 0 0 0 3 0 0 0 64 0 0 0.357 11 0.81
9 9 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
10 10 A 0 0 0 0 0 0 0 0 63 0 0 0 0 0 0 5 2 31 0 0 64 0 0 0.866 28 0.49
11 11 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
12 12 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 16 2 70 3 9 64 0 0 0.933 31 0.64
13 13 A 0 0 0 0 0 0 0 0 6 0 86 3 0 0 0 0 0 0 5 0 64 0 0 0.555 18 0.73
14 14 A 2 48 47 2 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 64 0 0 0.901 30 0.69
15 15 A 86 6 2 2 0 0 0 0 0 0 0 3 0 0 0 0 0 2 0 0 64 0 0 0.607 20 0.82
16 16 A 0 2 0 0 0 0 0 0 2 0 0 6 0 0 5 63 2 19 0 3 64 0 0 1.228 40 0.43
17 17 A 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
18 18 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 95 3 0 0 64 0 0 0.219 7 0.95
19 19 A 0 0 2 0 0 0 0 2 33 0 2 30 0 0 0 13 17 0 3 0 64 0 0 1.592 53 0.22
20 20 A 14 0 0 0 0 0 0 0 5 0 3 3 0 0 3 67 3 2 0 0 64 0 0 1.185 39 0.36
21 21 A 77 0 0 0 0 0 0 0 2 0 0 22 0 0 0 0 0 0 0 0 64 0 0 0.602 20 0.54
22 22 A 0 2 0 17 0 0 0 0 0 0 0 5 0 0 0 0 2 72 0 3 64 0 0 0.922 30 0.37
23 23 A 0 0 0 0 0 0 0 45 3 0 19 0 0 0 0 0 0 17 3 13 64 0 0 1.452 48 0.43
24 24 A 0 64 0 0 0 0 0 0 14 0 3 14 0 0 0 2 0 3 0 0 64 0 0 1.119 37 0.24
25 25 A 3 61 36 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.778 25 0.72
26 26 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 64 19 8 2 64 0 0 1.062 35 0.55
27 27 A 0 0 2 0 0 0 0 0 58 0 6 6 0 0 2 2 23 0 0 2 64 0 0 1.263 42 0.33
28 28 A 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 64 0 0 0.000 0 1.00
29 29 A 0 2 0 0 0 0 0 0 2 0 2 72 0 0 0 2 8 0 14 0 64 0 0 0.972 32 0.46
30 30 A 0 0 0 0 0 0 0 0 2 0 9 0 0 0 45 16 28 0 0 0 64 0 0 1.292 43 0.39
31 31 A 0 5 0 0 0 0 0 0 0 5 0 0 0 0 0 81 3 0 6 0 64 5 8 0.737 24 0.67
32 32 A 0 85 3 0 0 0 3 0 0 0 0 0 0 7 0 0 2 0 0 0 59 0 0 0.621 20 0.73
33 33 A 0 0 2 0 0 0 0 0 7 0 15 0 0 2 0 3 0 67 2 3 60 0 0 1.167 38 0.44
34 34 A 2 2 2 0 0 0 0 3 80 0 5 2 0 0 0 0 2 0 2 2 60 0 0 0.919 30 0.65
35 35 A 70 3 0 25 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 60 0 0 0.778 25 0.64
36 36 A 0 0 0 0 0 0 0 0 8 2 58 32 0 0 0 0 0 0 0 0 60 0 0 0.954 31 0.45
37 37 A 0 0 0 0 0 0 0 3 2 0 5 0 2 0 2 83 3 0 0 0 60 0 0 0.733 24 0.65
38 38 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 93 5 0 0 0 0 60 0 0 0.282 9 0.91
39 39 A 0 78 22 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 0.523 17 0.81
40 40 A 0 0 0 0 0 0 0 0 59 0 0 2 0 5 0 0 2 33 0 0 63 0 0 0.955 31 0.45
41 41 A 32 6 32 0 0 0 0 0 21 0 0 0 0 0 3 0 5 0 0 2 63 0 0 1.549 51 0.32
42 42 A 2 97 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 63 0 0 0.163 5 0.98
43 43 A 0 0 0 0 0 0 2 0 0 0 3 2 0 0 0 0 0 94 0 0 63 0 0 0.302 10 0.86
44 44 A 0 0 0 0 0 0 0 2 0 0 2 0 0 0 0 19 2 0 75 2 63 0 0 0.797 26 0.60
45 45 A 0 0 0 0 0 0 0 0 0 0 0 20 0 2 30 28 20 0 0 0 64 0 0 1.430 47 0.35
46 46 A 34 19 42 2 0 0 0 0 0 0 2 2 0 0 0 0 0 0 0 0 62 0 0 1.249 41 0.64
47 47 A 55 26 19 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 53 0 0 0.996 33 0.69
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
4 29 535 3 nSHSl
11 28 476 3 nHISl
16 28 480 1 nPl
32 29 486 2 lHPl
35 28 480 1 nLq
43 28 472 7 kHIPSQSPl
44 28 477 7 kHIPSQSPl
62 28 812 3 lTCTl
//