Complet list of 1apf hssp file
Complete list of 1apf.hssp file
HSSP HOMOLOGY DERIVED SECONDARY STRUCTURE OF PROTEINS , VERSION 2.0 2011
PDBID 1APF
THRESHOLD according to: t(L)=(290.15 * L ** -0.562) + 5
REFERENCE Sander C., Schneider R. : Database of homology-derived protein structures. Proteins, 9:56-68 (1991).
CONTACT Maintained at http://www.cmbi.ru.nl/ by Maarten L. Hekkelman
DATE file generated on 2014-03-19
HEADER CARDIAC STIMULANT 30-MAY-95 1APF
COMPND MOL_ID: 1; MOLECULE: ANTHOPLEURIN-B; CHAIN: A; SYNONYM: AP-B, AXII
SOURCE MOL_ID: 1; ORGANISM_SCIENTIFIC: ANTHOPLEURA XANTHOGRAMMICA; ORGANISM_C
AUTHOR S.A.MONKS,P.K.PALLAGHY,M.J.SCANLON,R.S.NORTON
DBREF 1APF A 1 49 UNP P01531 TXAB_ANTXA 1 49
SEQLENGTH 49
NCHAIN 1 chain(s) in 1APF data set
NALIGN 60
NOTATION : ID: EMBL/SWISSPROT identifier of the aligned (homologous) protein
NOTATION : STRID: if the 3-D structure of the aligned protein is known, then STRID is the Protein Data Bank identifier as taken
NOTATION : from the database reference or DR-line of the EMBL/SWISSPROT entry
NOTATION : %IDE: percentage of residue identity of the alignment
NOTATION : %SIM (%WSIM): (weighted) similarity of the alignment
NOTATION : IFIR/ILAS: first and last residue of the alignment in the test sequence
NOTATION : JFIR/JLAS: first and last residue of the alignment in the alignend protein
NOTATION : LALI: length of the alignment excluding insertions and deletions
NOTATION : NGAP: number of insertions and deletions in the alignment
NOTATION : LGAP: total length of all insertions and deletions
NOTATION : LSEQ2: length of the entire sequence of the aligned protein
NOTATION : ACCNUM: SwissProt accession number
NOTATION : PROTEIN: one-line description of aligned protein
NOTATION : SeqNo,PDBNo,AA,STRUCTURE,BP1,BP2,ACC: sequential and PDB residue numbers, amino acid (lower case = Cys), secondary
NOTATION : structure, bridge partners, solvent exposure as in DSSP (Kabsch and Sander, Biopolymers 22, 2577-2637(1983)
NOTATION : VAR: sequence variability on a scale of 0-100 as derived from the NALIGN alignments
NOTATION : pair of lower case characters (AvaK) in the alignend sequence bracket a point of insertion in this sequence
NOTATION : dots (....) in the alignend sequence indicate points of deletion in this sequence
NOTATION : SEQUENCE PROFILE: relative frequency of an amino acid type at each position. Asx and Glx are in their
NOTATION : acid/amide form in proportion to their database frequencies
NOTATION : NOCC: number of aligned sequences spanning this position (including the test sequence)
NOTATION : NDEL: number of sequences with a deletion in the test protein at this position
NOTATION : NINS: number of sequences with an insertion in the test protein at this position
NOTATION : ENTROPY: entropy measure of sequence variability at this position
NOTATION : RELENT: relative entropy, i.e. entropy normalized to the range 0-100
NOTATION : WEIGHT: conservation weight
## PROTEINS : identifier and alignment statistics
NR. ID STRID %IDE %WSIM IFIR ILAS JFIR JLAS LALI NGAP LGAP LSEQ2 ACCNUM PROTEIN
1 : TXAB_ANTXA 1APF 1.00 1.00 1 49 1 49 49 0 0 49 P01531 Anthopleurin-B OS=Anthopleura xanthogrammica PE=1 SV=1
2 : V9GZA1_ANTXA 1.00 1.00 1 49 2 50 49 0 0 50 V9GZA1 Anthopleurin B OS=Anthopleura xanthogrammica GN=anthopleurin B PE=4 SV=1
3 : TX6_ANTXA 0.90 0.94 1 49 1 49 49 0 0 49 P0C5G3 Toxin PCR6 OS=Anthopleura xanthogrammica PE=2 SV=1
4 : TX7_ANTXA 0.86 0.92 1 49 1 49 49 0 0 49 P0C5G4 Toxin PCR7 OS=Anthopleura xanthogrammica PE=2 SV=1
5 : TXAA_ANTXA 1AHL 0.86 0.92 1 49 1 49 49 0 0 49 P01530 Anthopleurin-A OS=Anthopleura xanthogrammica PE=1 SV=1
6 : TXA21_ANTEL 0.84 0.90 1 49 1 47 49 1 2 47 P0C1F2 Toxin APE 2-1 OS=Anthopleura elegantissima PE=1 SV=1
7 : TXA22_ANTEL 0.84 0.90 1 49 1 47 49 1 2 47 P0C1F3 Toxin APE 2-2 OS=Anthopleura elegantissima PE=1 SV=1
8 : TXAC_ANTEL 0.84 0.90 1 49 1 47 49 1 2 47 P01532 Anthopleurin-C OS=Anthopleura elegantissima PE=1 SV=1
9 : TXH16_ANTS7 0.84 0.88 1 49 1 47 49 1 2 47 P0C5F7 Toxin Hk16 OS=Anthopleura sp. (strain 'Zhanjiang') PE=2 SV=1
10 : TXH2_ANTS7 0.84 0.88 1 49 1 47 49 1 2 47 P0C5F4 Toxin Hk2 OS=Anthopleura sp. (strain 'Zhanjiang') PE=2 SV=1
11 : TX5_ANTXA 0.82 0.90 1 49 1 47 49 1 2 47 P0C5G2 Toxin PCR5 OS=Anthopleura xanthogrammica PE=3 SV=1
12 : TXA2_ANTFU 0.82 0.90 1 49 2 48 49 1 2 48 P10454 Neurotoxin-2 OS=Anthopleura fuscoviridis PE=1 SV=1
13 : TXH8_ANTS7 0.82 0.88 1 49 1 47 49 1 2 47 P0C5F6 Toxin Hk8 OS=Anthopleura sp. (strain 'Zhanjiang') PE=2 SV=1
14 : TXA5_ANESU 0.81 0.85 1 48 1 46 48 1 2 46 P01529 Neurotoxin-5 OS=Anemonia sulcata PE=1 SV=1
15 : B1NWR0_9CNID 0.80 0.88 1 49 34 80 49 1 2 80 B1NWR0 Toxin 2-1 (Precursor) OS=Anemonia viridis PE=3 SV=1
16 : B1NWT7_9CNID 0.80 0.88 1 49 33 79 49 1 2 79 B1NWT7 Toxin 2c2 (Precursor) OS=Anemonia viridis PE=3 SV=1
17 : TX1_ANTXA 0.80 0.86 1 49 1 47 49 1 2 47 P0C5F8 Toxin PCR1 OS=Anthopleura xanthogrammica PE=2 SV=1
18 : TX2_ANTXA 0.80 0.88 1 49 1 47 49 1 2 47 P0C5F9 Toxin PCR2 OS=Anthopleura xanthogrammica PE=2 SV=1
19 : TX3_ANTXA 0.80 0.88 1 49 1 47 49 1 2 47 P0C5G0 Toxin PCR3 OS=Anthopleura xanthogrammica PE=2 SV=1
20 : TXA2_ANESU 0.80 0.88 1 49 1 47 49 1 2 47 P01528 Neurotoxin 2 OS=Anemonia sulcata PE=1 SV=1
21 : TXH7_ANTS7 0.80 0.88 1 49 1 47 49 1 2 47 P0C5F5 Toxin Hk7 OS=Anthopleura sp. (strain 'Zhanjiang') PE=2 SV=1
22 : B1NWR3_9CNID 0.78 0.88 1 49 34 80 49 1 2 80 B1NWR3 Neurotoxin 2 (Precursor) OS=Anemonia viridis PE=3 SV=1
23 : TX4_ANTXA 0.78 0.88 1 49 1 47 49 1 2 47 P0C5G1 Toxin PCR4 OS=Anthopleura xanthogrammica PE=2 SV=1
24 : TXA1_ANTFU 0.78 0.88 1 49 1 47 49 1 2 47 P10453 Neurotoxin-1 OS=Anthopleura fuscoviridis PE=1 SV=1
25 : TXA12_ANTEL 0.73 0.82 1 49 1 47 49 1 2 47 P0C1F1 Toxin APE 1-2 OS=Anthopleura elegantissima PE=1 SV=1
26 : TXD1A_BUNCN 0.71 0.78 1 49 1 47 49 1 2 47 P86459 Toxin delta-AITX-Bcg1a OS=Bunodosoma cangicum PE=1 SV=1
27 : TXC3_BUNCI 0.69 0.84 1 49 1 48 49 1 1 48 Q7M425 Major neurotoxin BcIII OS=Bunodosoma caissarum PE=1 SV=1
28 : TXCAN_BUNCN 0.69 0.82 1 49 1 48 49 1 1 48 P82803 Cangitoxin OS=Bunodosoma cangicum PE=1 SV=1
29 : TXD1B_BUNCN 0.69 0.80 1 49 1 47 49 1 2 47 P86460 Toxin delta-AITX-Bcg1b OS=Bunodosoma cangicum PE=1 SV=1
30 : TXA11_ANTEL 0.67 0.80 1 49 1 47 49 1 2 47 P0C1F0 Toxin APE 1-1 OS=Anthopleura elegantissima PE=1 SV=1
31 : TXCN2_BUNCN 0.67 0.82 1 49 1 48 49 1 1 48 P0C7P9 Cangitoxin-2 OS=Bunodosoma cangicum PE=1 SV=1
32 : TXCN3_BUNCN 0.65 0.82 1 49 1 48 49 1 1 48 P0C7Q0 Cangitoxin-3 OS=Bunodosoma cangicum PE=1 SV=1
33 : TX2_BUNGR 0.63 0.80 1 49 1 48 49 1 1 48 P0C1F4 Neurotoxin Bg-2 OS=Bunodosoma granulifera PE=1 SV=1
34 : TX3_BUNGR 0.61 0.80 1 49 1 48 49 1 1 48 P0C1F5 Neurotoxin Bg-3 OS=Bunodosoma granulifera PE=1 SV=1
35 : B1NWU2_ACTEQ 0.56 0.65 1 49 29 82 54 1 5 82 B1NWU2 Putative neurotoxin 2-1 OS=Actinia equina PE=3 SV=1
36 : B1NWU3_ACTEQ 0.56 0.65 1 49 29 82 54 1 5 82 B1NWU3 Putative neurotoxin 2-2 (Precursor) OS=Actinia equina PE=3 SV=1
37 : B1NWU4_ACTEQ 0.56 0.65 1 49 29 82 54 1 5 82 B1NWU4 Putative neurotoxin 2-3 (Precursor) OS=Actinia equina PE=3 SV=1
38 : TXA1_ANESU 1ATX 0.55 0.76 1 49 1 46 49 2 3 46 P01533 Neurotoxin-1 OS=Anemonia sulcata PE=1 SV=1
39 : AETX1_ANEER 0.54 0.70 1 49 1 46 50 3 5 47 P69943 Toxin AETX-1 OS=Anemonia erythraea PE=1 SV=1
40 : B1NWU6_ACTEQ 0.54 0.63 1 49 28 81 54 1 5 81 B1NWU6 Putative neurotoxin 4-1 (Precursor) OS=Actinia equina PE=3 SV=1
41 : GIG2_STIGI 0.53 0.71 1 49 31 74 49 2 5 74 Q76CA3 Gigantoxin-2 OS=Stichodactyla gigantea PE=1 SV=1
42 : TXCP1_CONPS 0.53 0.73 1 49 1 47 49 1 2 47 P0CH42 Toxin Cp-1 OS=Condylactis passiflora PE=1 SV=1
43 : TXNA_CONGI 2H9X 0.53 0.69 1 49 1 47 49 1 2 47 P0C280 Toxin CgNa OS=Condylactis gigantea PE=1 SV=1
44 : TXRC1_HETCR 0.51 0.73 1 49 1 47 49 1 2 47 P0C5G5 Toxin Rc-1 OS=Heteractis crispa PE=1 SV=1
45 : B1NWU5_ACTEQ 0.50 0.61 1 49 29 82 54 1 5 82 B1NWU5 Putative neurotoxin 3-1 (Precursor) OS=Actinia equina PE=3 SV=1
46 : B1NWT5_9CNID 0.49 0.71 1 49 37 82 49 2 3 83 B1NWT5 Putative neurotoxin 9 (Precursor) OS=Anemonia viridis PE=3 SV=1
47 : B1NWU1_ACTEQ 0.48 0.59 1 49 29 82 54 1 5 82 B1NWU1 Neurotoxin 1 (Precursor) OS=Actinia equina PE=3 SV=1
48 : TXAE1_ACTEQ 0.48 0.59 1 49 29 82 54 1 5 82 Q9NJQ2 Neurotoxin Ae I OS=Actinia equina PE=1 SV=1
49 : TX171_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 P0CH45 Neurotoxin Nv1-3391.7.1 OS=Nematostella vectensis GN=v1g150294 PE=5 SV=1
50 : TX251_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 B1NWS4 Neurotoxin Nv1-116.25.1 OS=Nematostella vectensis GN=v1g113108 PE=2 SV=2
51 : TX271_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 B1NWS1 Neurotoxin Nv1-116.27.1 OS=Nematostella vectensis GN=v1g113065 PE=2 SV=2
52 : TX281_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 B1NWR6 Neurotoxin Nv1-116.28.1 OS=Nematostella vectensis GN=v1g113139 PE=2 SV=2
53 : TX371_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 P0CH90 Neurotoxin Nv1-116.37.1 OS=Nematostella vectensis GN=v1g113210 PE=2 SV=1
54 : TX391_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 P0CH46 Neurotoxin Nv1-116.39.1 OS=Nematostella vectensis GN=v1g113166 PE=2 SV=1
55 : TX401_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 B1NWS8 Neurotoxin Nv1-116.40.1 OS=Nematostella vectensis GN=v1g113221 PE=2 SV=1
56 : TX411_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 A7SCE5 Neurotoxin Nv1-116.41.1 OS=Nematostella vectensis GN=v1g113105 PE=2 SV=2
57 : TX451_NEMVE 0.47 0.71 1 49 39 85 49 1 2 85 B1NWR7 Neurotoxin Nv1-116.45.1 OS=Nematostella vectensis GN=v1g113209 PE=2 SV=1
58 : TXAM3_ANTMC 0.45 0.67 1 49 27 73 49 1 2 74 P69928 Peptide toxin Am-3 OS=Antheopsis maculata PE=1 SV=1
59 : B1NWT4_9CNID 0.40 0.60 1 48 37 73 48 3 11 76 B1NWT4 Putative neurotoxin 8 (Precursor) OS=Anemonia viridis PE=4 SV=1
60 : HAL_HALCG 0.40 0.56 2 49 1 46 48 1 2 47 P0C5G6 Halcurin OS=Halcurias carlgreni PE=1 SV=1
## ALIGNMENTS 1 - 60
SeqNo PDBNo AA STRUCTURE BP1 BP2 ACC NOCC VAR ....:....1....:....2....:....3....:....4....:....5....:....6....:....7
1 1 A G 0 0 113 60 2 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSGGGGGGGGGGGGG
2 2 A V - 0 0 79 61 35 VVVVVVVVVVVVVVVVVVAVVIVVVVVVVIVVAAVVVAAVVVVVIAIIIIIIIIIIIFTV
3 3 A P B -A 21 0A 58 61 32 PPSSSPPPPPSPPPPPPAAPPPPAPPAAPAAASSPPPAPPPPPPPSPPPPPPPPPPPPPA
4 4 A a - 0 0 23 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
5 5 A L - 0 0 104 61 79 LLLLLLLLLLLLLLLLLLFLLLLLLLRRLLRRRRLLLLLLRRRRLLLLAAAAAAAAARPR
6 6 A b - 0 0 14 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
7 7 A D S S+ 0 0 96 61 38 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDVVVKAVDDDDVAVVDDDDDDDDDDDE
8 8 A S S S+ 0 0 58 60 5 SSSSSSSSSSSSSSSSSASSSSSSSSSSSSSSSSSSSSNSSSSSSSSSSSSSSSSSSS.S
9 9 A D + 0 0 21 60 3 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDSDDDDDDDDDDDDDDDDDDD.D
10 10 A G S S+ 0 0 34 60 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG.G
11 11 A P S S+ 0 0 129 60 0 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPP.P
12 12 A R - 0 0 75 60 70 RRSSSSNSSSSSSSSSNSSSSSSNNSTTSSTTTTRRRNNRHSSSSTSSDDDDDDDDDS.D
13 13 A P S > S+ 0 0 101 60 53 PPVVVVVVVVVVVVVVVVVVVVVVVVSVVVVVSSPPPTTPVVVVTTTTIIIIIIIIIV.V
14 14 A R T 3 S+ 0 0 229 60 21 RRRRRRRRRRSRRRRRRSSRHRRRRRRRRRRHRRRRRRRRRHHHRRRRRRRRRRRRRH.R
15 15 A G T > S+ 0 0 47 61 24 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSSSSSSSSSGGS
16 16 A N T < S+ 0 0 62 61 41 NNNNNNNNNNNNNNNNNNNNNNNNNNNNDNDDNDNNNNNNNNNNNNNNAAAAAAAAANEA
17 17 A T T 3 S+ 0 0 78 61 58 TTTTTTTTTTTTTTTTTTTTTTSTTTTSTTSSTTNNNSDNTTTTNSKKSSSSSSSSSPST
18 18 A L S < S+ 0 0 86 61 2 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLMLLLLLLLLLLLLLLLLLLLLMF
19 19 A S + 0 0 29 60 14 SSSSSSSSSSSSSSSSSSSSSSSSSSTSSSSSTTSSSSNSTSSSSSSSSSSSSSSSSSS.
20 20 A G S S- 0 0 2 60 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG.
21 21 A I E -AB 3 47A 52 61 47 IIITTIIITTIITIIITIIITIITTTTTTTTTTTIIITITTTTTITTTIIIIIIIIITIT
22 22 A L E - B 0 46A 37 61 42 LLLLLLLLLLIILLIIYLLIIIIIYVLLVYLLLLMMMIVIVVVIMIIIVVVVVVVVVIIG
23 23 A W E - B 0 45A 57 61 7 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWT
24 24 A F + 0 0 149 57 24 FFFLLLLLLLLLLLLLLLLLLLLLL.LLVLLLLLMMMVVMV...MLMMMMMMMMMMMVFV
25 25 A Y > - 0 0 105 35 108 YYYYY...F...F.........F.....F...IIKKKFFKF...KFKKGGGGGGGGGTWD
26 26 A P T 3 S+ 0 0 125 35 75 PPPPP....................VTT..TT..TTT..TGVVVTGTTSSSSSSSSSSSL
27 27 A S T 3 S- 0 0 95 55 66 SSSSSAAA.AAA.AAAAAAAAA.AAFGG.AGGGGggg..gCGGGgCggCCCCCCCCCCCW
28 28 A G S < S+ 0 0 13 48 26 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRRgggGGg.SSSg.gg...........N
29 29 A c S S- 0 0 28 48 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC.CCCC.CC...........C
30 30 A P > - 0 0 11 61 16 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAEPPPPPPPPPPPPPAPN
31 31 A S T 3 S+ 0 0 131 61 34 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSKKKSSKSSSTKSKKSSSSSSSSSTAT
32 32 A G T 3 S+ 0 0 59 61 0 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
33 33 A W < - 0 0 40 61 0 WWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWWW
34 34 A H - 0 0 147 61 42 HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHNHHHHHHHGHHKKKKKKKKKHRH
35 35 A N - 0 0 44 61 74 NNNNNNNNNNNNNNNNNNNNNNNNNINNINNNNNFFFNDFKKKKFDFFKKKKKKKKKKKK
36 36 A b S S+ 0 0 3 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
37 37 A K > - 0 0 69 60 61 KKKKKKKKKKKKKKKKKKKKKKRKKTRRTKRRRRGGGE.GQNNNGKGGKKKKKKKKKNGI
38 38 A A T 3 S+ 0 0 68 60 67 AAAAAAAAAAAAAKKKSAAKAKDASSGGSSGGGGKKKG.KKTDTKGKKSSSSSSSSSSAA
39 39 A H T 3 S- 0 0 119 61 88 HHHHHHHHHHHHRHHHSHHHHHHHSDSSDSSSSSSSSRHSGEEESRSSYYYYYYYYYEET
40 40 A G < - 0 0 5 61 98 GGGGGGGGGGGGGKGGGGGGGGGGGGGGGGGGGGRRRAgRSHYHRARRYYYYYYYYYNWY
41 41 A P - 0 0 38 57 63 PPPPPPPPPPPPPPPPPPPPPPPPPPPPPQPPPPGGG.aG.NNNG.GGSSSSSSSSSE.T
42 42 A N S S+ 0 0 160 59 78 NNTTTTTTTTNTTTTTNTNTTTTTLTFFTLFFFFFFFIML.IILFILLIIIIIIIIIL.A
43 43 A I S S- 0 0 123 60 41 IIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIIFFFIVL.FAFFALLVVVVVVVVVFPV
44 44 A G S S- 0 0 8 61 52 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGSSSGGSSHYHSGSSAAAAAAAAAHAA
45 45 A W E -B 23 0A 105 61 108 WWWWWWWWWWWWWWWWWWWWWWWWASYYSAYYYYDDDYYDTEEEDTDDDDDDDDDDDEPS
46 46 A a E +B 22 0A 1 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
47 47 A c E -B 21 0A 0 61 0 CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
48 48 A K 0 0 31 61 29 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKQKKKKKKKKKNNNNNNNNNKKK
49 49 A K 0 0 199 59 45 KKQQQQQQKKKQK QQKKKQKQKQQKKKKQKKQQRRRQEQQEEQRRQQQQQQQQQQQQ K
## SEQUENCE PROFILE AND ENTROPY
SeqNo PDBNo V L I M F W Y G A P S T C H R K Q E N D NOCC NDEL NINS ENTROPY RELENT WEIGHT
1 1 A 0 0 0 0 0 0 0 98 0 0 2 0 0 0 0 0 0 0 0 0 60 0 0 0.085 2 0.97
2 2 A 64 0 23 0 2 0 0 0 10 0 0 2 0 0 0 0 0 0 0 0 61 0 0 0.987 32 0.65
3 3 A 0 0 0 0 0 0 0 0 16 72 11 0 0 0 0 0 0 0 0 0 61 0 0 0.781 26 0.68
4 4 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
5 5 A 0 62 0 0 2 0 0 0 15 2 0 0 0 0 20 0 0 0 0 0 61 0 0 1.032 34 0.20
6 6 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
7 7 A 11 0 0 0 0 0 0 0 3 0 0 0 0 0 0 2 0 2 0 82 61 1 0 0.658 21 0.61
8 8 A 0 0 0 0 0 0 0 0 2 0 97 0 0 0 0 0 0 0 2 0 60 0 0 0.169 5 0.94
9 9 A 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 98 60 0 0 0.085 2 0.96
10 10 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 0.000 0 1.00
11 11 A 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 60 0 0 0.000 0 1.00
12 12 A 0 0 0 0 0 0 0 0 0 0 48 12 0 2 12 0 0 0 10 17 60 0 0 1.450 48 0.30
13 13 A 58 0 15 0 0 0 0 0 0 12 5 10 0 0 0 0 0 0 0 0 60 0 0 1.230 41 0.46
14 14 A 0 0 0 0 0 0 0 0 0 0 5 0 0 10 85 0 0 0 0 0 60 0 0 0.518 17 0.78
15 15 A 0 0 0 0 0 0 0 84 0 0 16 0 0 0 0 0 0 0 0 0 61 0 0 0.446 14 0.76
16 16 A 0 0 0 0 0 0 0 0 16 0 0 0 0 0 0 0 0 2 75 7 61 0 0 0.755 25 0.58
17 17 A 0 0 0 0 0 0 0 0 0 2 26 59 0 0 0 3 0 0 8 2 61 0 0 1.114 37 0.41
18 18 A 0 95 0 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 1 0 0.227 7 0.98
19 19 A 0 0 0 0 0 0 0 0 0 0 92 7 0 0 0 0 0 0 2 0 60 0 0 0.329 10 0.86
20 20 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 60 0 0 0.000 0 1.00
21 21 A 0 0 52 0 0 0 0 0 0 0 0 48 0 0 0 0 0 0 0 0 61 0 0 0.692 23 0.53
22 22 A 25 34 28 7 0 0 5 2 0 0 0 0 0 0 0 0 0 0 0 0 61 0 0 1.462 48 0.58
23 23 A 0 0 0 0 0 98 0 0 0 0 0 2 0 0 0 0 0 0 0 0 61 4 0 0.084 2 0.93
24 24 A 11 53 0 28 9 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 57 22 0 1.145 38 0.75
25 25 A 0 0 6 0 23 3 17 26 0 0 0 3 0 0 0 20 0 0 0 3 35 8 0 1.779 59 -0.09
26 26 A 11 3 0 0 0 0 0 6 0 17 31 31 0 0 0 0 0 0 0 0 35 0 0 1.543 51 0.25
27 27 A 0 0 0 0 2 2 0 29 33 0 11 0 24 0 0 0 0 0 0 0 55 13 7 1.453 48 0.33
28 28 A 0 0 0 0 0 0 0 88 0 0 6 0 0 0 4 0 0 0 2 0 48 0 0 0.503 16 0.73
29 29 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 48 0 0 0.000 0 1.00
30 30 A 0 0 0 0 0 0 0 0 5 92 0 0 0 0 0 0 0 2 2 0 61 0 0 0.361 12 0.84
31 31 A 0 0 0 0 0 0 0 0 2 0 82 5 0 0 0 11 0 0 0 0 61 0 0 0.627 20 0.65
32 32 A 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
33 33 A 0 0 0 0 0 100 0 0 0 0 0 0 0 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
34 34 A 0 0 0 0 0 0 0 2 0 0 0 0 0 80 2 15 0 0 2 0 61 0 0 0.660 22 0.58
35 35 A 0 0 3 0 11 0 0 0 0 0 0 0 0 0 0 26 0 0 56 3 61 0 0 1.149 38 0.25
36 36 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 1 0 0.000 0 1.00
37 37 A 0 0 2 0 0 0 0 13 0 0 0 3 0 0 12 60 2 2 7 0 60 0 0 1.324 44 0.39
38 38 A 0 0 0 0 0 0 0 13 33 0 25 3 0 0 0 22 0 0 0 3 60 0 0 1.540 51 0.32
39 39 A 0 0 0 0 0 0 15 2 0 0 26 2 0 39 5 0 0 8 0 3 61 0 0 1.600 53 0.12
40 40 A 0 0 0 0 0 2 18 57 3 0 2 0 0 3 11 2 0 0 2 0 61 4 1 1.370 45 0.02
41 41 A 0 0 0 0 0 0 0 12 2 60 16 2 0 0 0 0 2 2 5 0 57 0 0 1.296 43 0.36
42 42 A 0 12 22 2 17 0 0 0 2 0 0 36 0 0 0 0 0 0 10 0 59 0 0 1.625 54 0.21
43 43 A 18 5 60 0 12 0 0 0 3 2 0 0 0 0 0 0 0 0 0 0 60 0 0 1.200 40 0.59
44 44 A 0 0 0 0 0 0 2 62 18 0 13 0 0 5 0 0 0 0 0 0 61 0 0 1.086 36 0.47
45 45 A 0 0 0 0 0 41 13 0 3 2 5 3 0 0 0 0 0 7 0 26 61 0 0 1.601 53 -0.09
46 46 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
47 47 A 0 0 0 0 0 0 0 0 0 0 0 0 100 0 0 0 0 0 0 0 61 0 0 0.000 0 1.00
48 48 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 84 2 0 15 0 61 0 0 0.499 16 0.71
49 49 A 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 32 54 5 0 0 59 0 0 1.057 35 0.55
## INSERTION LIST
AliNo IPOS JPOS Len Sequence
35 28 56 5 gGYGGNg
36 28 56 5 gGYGGNg
37 28 56 5 gGYGGNg
39 37 37 1 gRa
40 28 55 5 gGYGGNg
45 28 56 5 gGYGGNg
47 28 56 5 gGYGGNg
48 28 56 5 gGYGGNg
//