Complet list of 1zdd con file
Complete list of 1zdd.con file
COMMENT BEGIN
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COMMENT END
CONTACTS BETWEEN
CHAIN(S) "A"
AND
CHAIN(S) "A"
HYDROPHOBIC 2.00 3.80 122
C A 0006 PHE C 2.477 C A 0007 ASN CA
C A 0006 PHE C 3.027 C A 0007 ASN C
C A 0006 PHE C 3.740 C A 0007 ASN CB
C A 0006 PHE CG 3.604 H A 0014 PHE CE2
C A 0006 PHE CD1 3.782 H A 0014 PHE CE2
C A 0006 PHE CD2 3.530 H A 0014 PHE CE2
C A 0006 PHE CE2 3.592 H A 0014 PHE CE2
C A 0006 PHE CZ 3.738 H A 0014 PHE CE2
C A 0007 ASN C 2.468 H A 0008 MET CA
C A 0007 ASN C 3.028 H A 0008 MET C
C A 0007 ASN C 3.741 H A 0008 MET CB
H A 0008 MET C 2.459 H A 0009 GLN CA
H A 0008 MET C 2.994 H A 0009 GLN C
H A 0008 MET C 3.726 H A 0009 GLN CB
H A 0009 GLN C 2.470 H A 0010 CYS CA
H A 0009 GLN C 3.064 H A 0010 CYS C
H A 0009 GLN C 3.715 H A 0010 CYS CB
H A 0010 CYS C 2.483 H A 0011 GLN CA
H A 0010 CYS C 3.005 H A 0011 GLN C
H A 0010 CYS C 3.710 H A 0011 GLN CB
H A 0010 CYS C 3.624 H A 0014 PHE CD2
H A 0011 GLN C 2.470 H A 0012 ARG CA
H A 0011 GLN C 3.092 H A 0012 ARG C
H A 0011 GLN C 3.736 H A 0012 ARG CB
H A 0012 ARG C 2.460 H A 0013 ARG CA
H A 0012 ARG C 3.029 H A 0013 ARG C
H A 0012 ARG C 3.741 H A 0013 ARG CB
H A 0013 ARG C 2.457 H A 0014 PHE CA
H A 0013 ARG C 3.020 H A 0014 PHE C
H A 0013 ARG C 3.753 H A 0014 PHE CB
H A 0014 PHE C 2.472 H A 0015 TYR CA
H A 0014 PHE C 2.993 H A 0015 TYR C
H A 0014 PHE C 3.716 H A 0015 TYR CB
H A 0014 PHE CD1 3.755 H A 0035 ILE CG2
H A 0014 PHE CE1 3.789 H A 0035 ILE CB
H A 0014 PHE CE1 3.369 H A 0035 ILE CG2
H A 0014 PHE CZ 3.633 H A 0035 ILE CG2
H A 0015 TYR C 2.464 H A 0016 GLU CA
H A 0015 TYR C 3.026 H A 0016 GLU C
H A 0015 TYR C 3.725 H A 0016 GLU CB
H A 0015 TYR CD1 3.522 C A 0019 HIS CD2
H A 0015 TYR CE1 3.442 C A 0019 HIS CD2
H A 0015 TYR CZ 3.625 C A 0019 HIS CD2
H A 0016 GLU C 2.469 H A 0017 ALA CA
H A 0016 GLU C 3.038 H A 0017 ALA C
H A 0016 GLU C 3.732 H A 0017 ALA CB
H A 0017 ALA C 2.466 H A 0018 LEU CA
H A 0017 ALA C 2.992 H A 0018 LEU C
H A 0017 ALA C 3.746 H A 0018 LEU CB
H A 0017 ALA CB 3.755 H A 0032 ILE CD1
H A 0018 LEU C 2.460 C A 0019 HIS CA
H A 0018 LEU C 3.269 C A 0019 HIS C
H A 0018 LEU C 3.644 C A 0019 HIS CB
C A 0019 HIS C 2.467 C A 0020 ASP CA
C A 0019 HIS C 3.664 C A 0020 ASP C
C A 0019 HIS C 3.234 C A 0020 ASP CB
C A 0020 ASP CA 2.929 C A 0021 PRO CD
C A 0020 ASP C 2.474 C A 0021 PRO CA
C A 0020 ASP C 3.201 C A 0021 PRO C
C A 0020 ASP C 3.661 C A 0021 PRO CB
C A 0020 ASP C 3.686 C A 0021 PRO CG
C A 0020 ASP C 2.495 C A 0021 PRO CD
C A 0020 ASP CG 3.606 C A 0023 LEU CD2
C A 0021 PRO C 2.456 C A 0022 ASN CA
C A 0021 PRO C 3.000 C A 0022 ASN C
C A 0021 PRO C 3.729 C A 0022 ASN CB
C A 0022 ASN C 2.462 C A 0023 LEU CA
C A 0022 ASN C 3.200 C A 0023 LEU C
C A 0022 ASN C 3.675 C A 0023 LEU CB
C A 0022 ASN C 3.356 C A 0023 LEU CD2
C A 0023 LEU C 2.455 C A 0024 ASN CA
C A 0023 LEU C 3.240 C A 0024 ASN C
C A 0023 LEU C 3.665 C A 0024 ASN CB
C A 0024 ASN C 2.463 H A 0025 GLU CA
C A 0024 ASN C 2.988 H A 0025 GLU C
C A 0024 ASN C 3.728 H A 0025 GLU CB
C A 0024 ASN CG 3.714 H A 0027 GLN CG
C A 0024 ASN CG 3.555 H A 0027 GLN CD
H A 0025 GLU C 2.465 H A 0026 GLU CA
H A 0025 GLU C 3.030 H A 0026 GLU C
H A 0025 GLU C 3.730 H A 0026 GLU CB
H A 0026 GLU C 2.474 H A 0027 GLN CA
H A 0026 GLU C 3.049 H A 0027 GLN C
H A 0026 GLU C 3.723 H A 0027 GLN CB
H A 0027 GLN C 2.465 H A 0028 ARG CA
H A 0027 GLN C 3.095 H A 0028 ARG C
H A 0027 GLN C 3.711 H A 0028 ARG CB
H A 0028 ARG C 2.448 H A 0029 ASN CA
H A 0028 ARG C 3.027 H A 0029 ASN C
H A 0028 ARG C 3.736 H A 0029 ASN CB
H A 0029 ASN C 2.459 H A 0030 ALA CA
H A 0029 ASN C 3.047 H A 0030 ALA C
H A 0029 ASN C 3.730 H A 0030 ALA CB
H A 0030 ALA C 2.467 H A 0031 LYS CA
H A 0030 ALA C 3.035 H A 0031 LYS C
H A 0030 ALA C 3.729 H A 0031 LYS CB
H A 0031 LYS C 2.469 H A 0032 ILE CA
H A 0031 LYS C 2.981 H A 0032 ILE C
H A 0031 LYS C 3.752 H A 0032 ILE CB
H A 0031 LYS CG 3.772 H A 0035 ILE CD1
H A 0031 LYS CD 3.642 H A 0035 ILE CD1
H A 0032 ILE C 2.468 H A 0033 LYS CA
H A 0032 ILE C 3.029 H A 0033 LYS C
H A 0032 ILE C 3.728 H A 0033 LYS CB
H A 0033 LYS C 2.468 H A 0034 SER CA
H A 0033 LYS C 3.065 H A 0034 SER C
H A 0033 LYS C 3.734 H A 0034 SER CB
H A 0034 SER C 2.463 H A 0035 ILE CA
H A 0034 SER C 2.994 H A 0035 ILE C
H A 0034 SER C 3.745 H A 0035 ILE CB
H A 0035 ILE C 2.460 H A 0036 ARG CA
H A 0035 ILE C 3.108 H A 0036 ARG C
H A 0035 ILE C 3.719 H A 0036 ARG CB
H A 0036 ARG C 2.458 H A 0037 ASP CA
H A 0036 ARG C 3.039 H A 0037 ASP C
H A 0036 ARG C 3.724 H A 0037 ASP CB
H A 0037 ASP C 2.470 H A 0038 ASP CA
H A 0037 ASP C 3.059 H A 0038 ASP C
H A 0037 ASP C 3.724 H A 0038 ASP CB
H A 0038 ASP C 2.476 H A 0039 CYS CA
H A 0038 ASP C 3.134 H A 0039 CYS C
H A 0038 ASP C 3.717 H A 0039 CYS CB
CHARGE_ATTR 2.00 12.00 40
H A 0016 GLU OE1 10.72 H A 0012 ARG NH1
H A 0016 GLU OE1 11.75 H A 0012 ARG NH2
H A 0016 GLU OE1 8.446 C A 0019 HIS ND1
H A 0016 GLU OE1 8.420 C A 0019 HIS NE2
H A 0016 GLU OE2 7.765 C A 0019 HIS ND1
H A 0016 GLU OE2 8.313 C A 0019 HIS NE2
H A 0016 GLU OE1 10.84 H A 0028 ARG NH1
H A 0016 GLU OE2 8.934 H A 0028 ARG NH1
H A 0016 GLU OE2 11.02 H A 0028 ARG NH2
H A 0016 GLU OE1 10.61 H A 0031 LYS NZ
H A 0016 GLU OE2 9.273 H A 0031 LYS NZ
C A 0020 ASP OD1 9.427 C A 0019 HIS ND1
C A 0020 ASP OD1 10.94 C A 0019 HIS NE2
C A 0020 ASP OD2 9.691 C A 0019 HIS ND1
C A 0020 ASP OD2 10.97 C A 0019 HIS NE2
C A 0020 ASP OD1 6.773 H A 0028 ARG NH1
C A 0020 ASP OD1 8.140 H A 0028 ARG NH2
C A 0020 ASP OD2 7.370 H A 0028 ARG NH1
C A 0020 ASP OD2 8.781 H A 0028 ARG NH2
C A 0020 ASP OD1 8.208 H A 0031 LYS NZ
C A 0020 ASP OD2 6.154 H A 0031 LYS NZ
H A 0025 GLU OE1 11.02 H A 0028 ARG NH1
H A 0025 GLU OE1 9.020 H A 0028 ARG NH2
H A 0025 GLU OE2 9.805 H A 0028 ARG NH1
H A 0025 GLU OE2 7.812 H A 0028 ARG NH2
H A 0026 GLU OE1 11.54 H A 0028 ARG NH2
H A 0026 GLU OE2 11.55 H A 0033 LYS NZ
H A 0037 ASP OD1 11.65 H A 0013 ARG NH1
H A 0037 ASP OD1 10.20 H A 0013 ARG NH2
H A 0037 ASP OD2 10.22 H A 0013 ARG NH1
H A 0037 ASP OD2 8.706 H A 0013 ARG NH2
H A 0037 ASP OD1 7.919 H A 0033 LYS NZ
H A 0037 ASP OD2 9.093 H A 0033 LYS NZ
H A 0037 ASP OD1 11.79 H A 0036 ARG NH1
H A 0038 ASP OD1 5.169 H A 0013 ARG NH1
H A 0038 ASP OD1 4.685 H A 0013 ARG NH2
H A 0038 ASP OD2 3.083 H A 0013 ARG NH1
H A 0038 ASP OD2 2.967 H A 0013 ARG NH2
H A 0038 ASP OD2 11.81 H A 0031 LYS NZ
H A 0038 ASP OD2 11.50 H A 0036 ARG NH2
CHARGE_REPU 2.00 12.00 28
H A 0012 ARG NH1 10.99 H A 0013 ARG NH1
H A 0012 ARG NH2 9.288 H A 0013 ARG NH1
H A 0012 ARG NH2 11.22 H A 0013 ARG NH2
H A 0013 ARG NH1 11.06 H A 0031 LYS NZ
H A 0013 ARG NH2 9.220 H A 0031 LYS NZ
H A 0013 ARG NH1 10.83 H A 0036 ARG NH2
H A 0013 ARG NH2 11.77 H A 0036 ARG NH1
H A 0013 ARG NH2 10.30 H A 0036 ARG NH2
H A 0016 GLU OE1 7.148 C A 0020 ASP OD1
H A 0016 GLU OE1 6.637 C A 0020 ASP OD2
H A 0016 GLU OE2 4.980 C A 0020 ASP OD1
H A 0016 GLU OE2 4.569 C A 0020 ASP OD2
C A 0019 HIS ND1 6.596 H A 0028 ARG NH1
C A 0019 HIS ND1 8.699 H A 0028 ARG NH2
C A 0019 HIS NE2 8.724 H A 0028 ARG NH1
C A 0019 HIS NE2 10.83 H A 0028 ARG NH2
C A 0019 HIS NE2 11.63 H A 0036 ARG NH2
H A 0025 GLU OE1 6.274 H A 0026 GLU OE1
H A 0025 GLU OE1 6.515 H A 0026 GLU OE2
H A 0025 GLU OE2 8.171 H A 0026 GLU OE1
H A 0025 GLU OE2 8.635 H A 0026 GLU OE2
H A 0028 ARG NH1 11.04 H A 0031 LYS NZ
H A 0028 ARG NH2 11.80 H A 0031 LYS NZ
H A 0033 LYS NZ 11.90 H A 0036 ARG NH1
H A 0037 ASP OD1 8.320 H A 0038 ASP OD1
H A 0037 ASP OD1 9.141 H A 0038 ASP OD2
H A 0037 ASP OD2 6.462 H A 0038 ASP OD1
H A 0037 ASP OD2 7.555 H A 0038 ASP OD2
HB_MM 2.00 3.20 63
C A 0007 ASN N 2.266 C A 0006 PHE O
H A 0008 MET N 2.255 C A 0007 ASN O
H A 0009 GLN N 3.196 C A 0007 ASN O
H A 0009 GLN N 2.249 H A 0008 MET O
H A 0010 CYS N 2.256 H A 0009 GLN O
H A 0011 GLN N 2.850 C A 0007 ASN O
H A 0011 GLN N 2.253 H A 0010 CYS O
H A 0012 ARG N 2.927 H A 0008 MET O
H A 0012 ARG N 2.257 H A 0011 GLN O
H A 0013 ARG N 2.974 H A 0009 GLN O
H A 0013 ARG N 3.137 H A 0010 CYS O
H A 0013 ARG N 2.251 H A 0012 ARG O
H A 0014 PHE N 2.938 H A 0010 CYS O
H A 0014 PHE N 2.255 H A 0013 ARG O
H A 0015 TYR N 2.991 H A 0011 GLN O
H A 0015 TYR N 2.255 H A 0014 PHE O
H A 0016 GLU N 2.892 H A 0012 ARG O
H A 0016 GLU N 2.254 H A 0015 TYR O
H A 0017 ALA N 2.983 H A 0013 ARG O
H A 0017 ALA N 3.135 H A 0014 PHE O
H A 0017 ALA N 2.257 H A 0016 GLU O
H A 0018 LEU N 2.871 H A 0014 PHE O
H A 0018 LEU N 2.255 H A 0017 ALA O
C A 0019 HIS N 3.123 H A 0015 TYR O
C A 0019 HIS N 3.017 H A 0016 GLU O
C A 0019 HIS N 2.254 H A 0018 LEU O
C A 0020 ASP N 3.038 H A 0018 LEU O
C A 0020 ASP N 2.256 C A 0019 HIS O
C A 0021 PRO N 2.251 C A 0020 ASP O
C A 0022 ASN N 3.128 C A 0020 ASP O
C A 0022 ASN N 2.251 C A 0021 PRO O
C A 0023 LEU N 3.159 C A 0020 ASP O
C A 0023 LEU N 2.264 C A 0022 ASN O
C A 0024 ASN N 2.258 C A 0023 LEU O
H A 0025 GLU N 2.249 C A 0024 ASN O
H A 0026 GLU N 2.256 H A 0025 GLU O
H A 0027 GLN N 2.258 H A 0026 GLU O
H A 0028 ARG N 2.852 C A 0024 ASN O
H A 0028 ARG N 2.253 H A 0027 GLN O
H A 0029 ASN N 2.957 H A 0025 GLU O
H A 0029 ASN N 2.246 H A 0028 ARG O
H A 0030 ALA N 2.912 H A 0026 GLU O
H A 0030 ALA N 2.252 H A 0029 ASN O
H A 0031 LYS N 2.879 H A 0027 GLN O
H A 0031 LYS N 3.122 H A 0028 ARG O
H A 0031 LYS N 2.253 H A 0030 ALA O
H A 0032 ILE N 2.933 H A 0028 ARG O
H A 0032 ILE N 2.255 H A 0031 LYS O
H A 0033 LYS N 2.917 H A 0029 ASN O
H A 0033 LYS N 2.254 H A 0032 ILE O
H A 0034 SER N 2.878 H A 0030 ALA O
H A 0034 SER N 3.174 H A 0031 LYS O
H A 0034 SER N 2.253 H A 0033 LYS O
H A 0035 ILE N 2.946 H A 0031 LYS O
H A 0035 ILE N 2.257 H A 0034 SER O
H A 0036 ARG N 2.893 H A 0032 ILE O
H A 0036 ARG N 2.249 H A 0035 ILE O
H A 0037 ASP N 2.847 H A 0033 LYS O
H A 0037 ASP N 2.253 H A 0036 ARG O
H A 0038 ASP N 3.014 H A 0034 SER O
H A 0038 ASP N 2.258 H A 0037 ASP O
H A 0039 CYS N 2.869 H A 0035 ILE O
H A 0039 CYS N 2.255 H A 0038 ASP O
HB_MS 2.00 3.20 9
C A 0006 PHE O 3.036 H A 0011 GLN NE2
H A 0010 CYS N 3.038 C A 0007 ASN OD1
H A 0018 LEU O 2.908 H A 0028 ARG NH1
C A 0024 ASN N 3.023 H A 0027 GLN OE1
H A 0025 GLU N 3.166 C A 0024 ASN OD1
H A 0025 GLU O 2.860 H A 0029 ASN ND2
H A 0026 GLU N 3.094 C A 0024 ASN OD1
H A 0027 GLN N 2.972 C A 0024 ASN OD1
H A 0030 ALA O 2.860 H A 0034 SER OG
AROMATIC 0.00 8.00 3
H A 0036 ARG 4.666 C A 0006 PHE
H A 0015 TYR 4.256 C A 0019 HIS
H A 0028 ARG 7.647 C A 0019 HIS
SS_BOND 1.50 2.80 1
H A 0010 CYS SG 2.047 H A 0039 CYS SG